Pregenerated sensors for WDR61 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061559Ensembl transcript IDs: ENSMUST00000051822.13, ENSMUST00000118771.8, ENSMUST00000121204.8, ENSMUST00000127451.2, ENSMUST00000130368.8
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAACCTCTCCTGGGGGCGGTCAAAGGGCAGATGAGACCTGTGGCTaGTCAAGTAAGCCAGCTAGCAGGACCAGGCTCCTGAAGAACACT | + |
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Preference number: 1 (lower is better) Translates to: GTSPGGGQRADETCG*SSKPASRTRLLKNT Trigger: AGTGTTCTTCAGGAGCCTGGTCCTGCTAGCTGGCTTACTTGACCAGCCACAGGTCTCATCTGCCCTTTGACCGCCCCCAGGAGAGGTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR TCA 90 bp | AACCTGTCAGATCCATCCTTACTTGGTTTTTATGGTACCAGACTTTaGCACAGACCAGGAACCTCTCCTGGGGGCGGTCAAAGGGCAGAT | + |
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Preference number: 1 (lower is better) Translates to: NLSDPSLLGFYGTRL*HRPGTSPGGGQRAD Trigger: ATCTGCCCTTTGACCGCCCCCAGGAGAGGTTCCTGGTCTGTGTCAAAGTCTGGTACCATAAAAACCAAGTAAGGATGGATCTGACAGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR TCA 90 bp | ACCAAGTTCCAGTGCACTCAGCCTGTTTCCTTCAGAACTCCATTCTaGAATAGGCTGGTATCACCTGGGAACAGAGAGCTGCCTTTCTAC | + |
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Preference number: 1 (lower is better) Translates to: TKFQCTQPVSFRTPF*NRLVSPGNRELPFY Trigger: GTAGAAAGGCAGCTCTCTGTTCCCAGGTGATACCAGCCTATTTCAGAATGGAGTTCTGAAGGAAACAGGCTGAGTGCACTGGAACTTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR TCA 90 bp | AGACCTGTGGCTGGTCAAGTAAGCCAGCTAGCAGGACCAGGCTCCTaGAGAACACTGCTGGCTAGTAAAACATACGTTTTCAAAGTACAG | + |
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Preference number: 1 (lower is better) Translates to: RPVAGQVSQLAGPGS*RTLLASKTYVFKVQ Trigger: CTGTACTTTGAAAACGTATGTTTTACTAGCCAGCAGTGTTCTTCAGGAGCCTGGTCCTGCTAGCTGGCTTACTTGACCAGCCACAGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR TCA 90 bp | TCATTTGTACTTTCAGGACTTATTTTGGAGATGCCAGTACCACACTaGCCTTTTGTGCTTCTTAGTGGCTTCGCCATGGTTCGTTCCCAC | + |
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Preference number: 1 (lower is better) Translates to: SFVLSGLILEMPVPH*PFVLLSGFAMVRSH Trigger: GTGGGAACGAACCATGGCGAAGCCACTAAGAAGCACAAAAGGTCAGTGTGGTACTGGCATCTCCAAAATAAGTCCTGAAAGTACAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR TCA 90 bp | CAATTAATAAGTGGACCACAACTCCAGGGTGGTGTTTCTGTGCTGTaGCTTACAAATAAATCACTGTTGGAGAGCTACTACTTAGCTTGT | + |
|
Preference number: 1 (lower is better) Translates to: QLISGPQLQGGVSVL*LTNKSLLESYYLAC Trigger: ACAAGCTAAGTAGTAGCTCTCCAACAGTGATTTATTTGTAAGTCACAGCACAGAAACACCACCCTGGAGTTGTGGTCCACTTATTAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR CAA 90 bp | GGCTTCGCCATGGTTCGTTCCCACAGTAGGCCCAGAGGACCACTCTaGGCCCCTAACAAAGGCCCAGAAGGTGGGTGTCTGGCCCATCTC | + |
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Preference number: 2 (lower is better) Translates to: GFAMVRSHSRPRGPL*APNKGPEGGCLAHL Trigger: GAGATGGGCCAGACACCCACCTTCTGGGCCTTTGTTAGGGGCCAAGAGTGGTCCTCTGGGCCTACTGTGGGAACGAACCATGGCGAAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCCCCTAACAAAGGCCCAGAAGGTGGGTGTCTGGCCCATCTCTAGTCTGTGGCTCCCCTTCCTCCCTTaGCAGAGTCACCAAGGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: WPLTKAQKVGVWPISSLWLPFLP*QSHQGY Trigger: ATACCCTTGGTGACTCTGCCAAGGGAGGAAGGGGAG...CCACAGACTAGAGATGGGCCAGACACCCACCTTCTGGGCCTTTGTTAGGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR CCA 90 bp | GCGGTCAAAGGGCAGATGAGACCTGTGGCTGGTCAAGTAAGCCAGCTAGCAGGAAGGACAGTAGAGAGCTaGAGTAGTGGGGAAGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: AVKGQMRPVAGQVSQLAGRTVES*SSGEEQ Trigger: CTGCTCTTCCCCACTACTCCAGCTCTCTACTGTCCT...TCCTGCTAGCTGGCTTACTTGACCAGCCACAGGTCTCATCTGCCCTTTGACCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR CCA 90 bp | GCGGTCAAAGGGCAGATGAGACCTGTGGCTGGTCAAGTAAGCCAGCTAGCAGGATGGGGAACTCTGACTTaGGATGAATGCAGCGATCCA | + |
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Preference number: 2 (lower is better) Translates to: AVKGQMRPVAGQVSQLAGWGTLT*DECSDP Trigger: TGGATCGCTGCATTCATCCCAAGTCAGAGTTCCCCA...TCCTGCTAGCTGGCTTACTTGACCAGCCACAGGTCTCATCTGCCCTTTGACCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTTTCTTTCCCTAAGGAAAGCTAAGCCCTTCATATGTATCCCTGGCAGCCCTGCAGGACCAGGCTCCTaGAGAACACTGCTGGCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: CFLSLRKAKPFICIPGSPAGPGS*RTLLAS Trigger: ACTAGCCAGCAGTGTTCTTCAGGAGCCTGGTCCTGC...AGGGCTGCCAGGGATACATATGAAGGGCTTAGCTTTCCTTAGGGAAAGAAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGGCAGAGTCACCAAGGGTATGAGCTCAGGTCTGGTAGTAACATTTCTGAATGTAGCTACAGGGGAGTaGGCAAGGGAGGTGGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: LGRVTKGMSSGLVVTFLNVATGE*AREVGN Trigger: GTTTCCCACCTCCCTTGCTCACTCCCCTGTAGCTAC...ATTCAGAAATGTTACTACCAGACCTGAGCTCATACCCTTGGTGACTCTGCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR GCA 90 bp | GCGGTCAAAGGGCAGATGAGACCTGTGGCTGGTCAAGTAAGCCAGCTAGCAGGAGAATCTACAGAGTGTTaGTTAACTGTCCCACCTGTA | + |
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Preference number: 2 (lower is better) Translates to: AVKGQMRPVAGQVSQLAGESTEC*LTVPPV Trigger: TACAGGTGGGACAGTTAAGCAACACTCTGTAGATTC...TCCTGCTAGCTGGCTTACTTGACCAGCCACAGGTCTCATCTGCCCTTTGACCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCCCCTAACAAAGGCCCAGAAGGTGGGTGTCTGGCCCATCTCTAGTCTGTGGCCTGAAGAACACTGCTaGCTAGTAAAACATACGTTT | + |
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Preference number: 2 (lower is better) Translates to: WPLTKAQKVGVWPISSLWPEEHC*LVKHTF Trigger: AAACGTATGTTTTACTAGCCAGCAGTGTTCTTCAGG...CCACAGACTAGAGATGGGCCAGACACCCACCTTCTGGGCCTTTGTTAGGGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGGCAGAGTCACCAAGGGTATGAGCTCAGGTCTGGTAGTAACATTTCTGAATGACCCAGTCCAGAGGTaGCTGCAGAGAAGACCTAAG | + |
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Preference number: 2 (lower is better) Translates to: LGRVTKGMSSGLVVTFLNDPVQR*LQRRPK Trigger: CTTAGGTCTTCTCTGCAGTCACCTCTGGACTGGGTC...ATTCAGAAATGTTACTACCAGACCTGAGCTCATACCCTTGGTGACTCTGCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR TCA 90 bp | CCACAGGCCATGACAGACTTAAAACTGCTTCCTCCAATTAATAAGTGGACCACAGGGTGTAGACCTGTCTaGGGAAGAGACACTGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: PQAMTDLKLLPPINKWTTGCRPV*GRDTEA Trigger: GGCCTCAGTGTCTCTTCCTCAGACAGGTCTACACCC...TGTGGTCCACTTATTAATTGGAGGAAGCAGTTTTAAGTCTGTCATGGCCTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTTTCTTTCCCTAAGGAAAGCTAAGCCCTTCATATGTATCCCTGGCAGCCCTCTAGTTGGCTGGCAATaGCAGCTGCTTGGGAATGTG | + |
|
Preference number: 2 (lower is better) Translates to: CFLSLRKAKPFICIPGSPLVGWQ*QLLGNV Trigger: CACATTCCCAAGCAGCTGTCATTGCCAGCCAACTAG...AGGGCTGCCAGGGATACATATGAAGGGCTTAGCTTTCCTTAGGGAAAGAAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTTTCTTTCCCTAAGGAAAGCTAAGCCCTTCATATGTATCCCTGGCAGCCCTCAGTCCAGAGGTGACTaGAGAGAAGACCTAAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: CFLSLRKAKPFICIPGSPQSRGD*REDLRC Trigger: GCACCTTAGGTCTTCTCTGCAGTCACCTCTGGACTG...AGGGCTGCCAGGGATACATATGAAGGGCTTAGCTTTCCTTAGGGAAAGAAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR TCA 90 bp | AATGAAAATGGCATCGCTTTAATAGCCTCACGTTTGGGGTGTCCCGTGTATGTGTGCTGGAACTCAGTCTaGGGCACAGCAGTGTTTAGC | + |
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Preference number: 2 (lower is better) Translates to: NENGIALIASRLGCPVYVCWNSV*GTAVFS Trigger: GCTAAACACTGCTGTGCCTCAGACTGAGTTCCAGCA...CACATACACGGGACACCCCAAACGTGAGGCTATTAAAGCGATGCCATTTTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGCTCTTAATGATCATCTATTGACGACCTTTGCAGTGTTGTCCCACCAAAGTTATCCCTGGCAGCCCTaGCCAGCTGCAGAAACAACC | + |
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Preference number: 2 (lower is better) Translates to: CALNDHLLTTFAVLSHQSYPWQP*PAAETT Trigger: GGTTGTTTCTGCAGCTGGTCAGGGCTGCCAGGGATA...ACTTTGGTGGGACAACACTGCAAAGGTCGTCAATAGATGATCATTAAGAGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR TCA 90 bp | CCACAGGCCATGACAGACTTAAAACTGCTTCCTCCAATTAATAAGTGGACCACATCTCTTGGGGAACTCTaGCTTGGGATGAATGCAGCG | + |
|
Preference number: 2 (lower is better) Translates to: PQAMTDLKLLPPINKWTTSLGEL*LGMNAA Trigger: CGCTGCATTCATCCCAAGTCAGAGTTCCCCAAGAGA...TGTGGTCCACTTATTAATTGGAGGAAGCAGTTTTAAGTCTGTCATGGCCTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTTTCTTTCCCTAAGGAAAGCTAAGCCCTTCATATGTATCCCTGGCAGCCCTGCTGGCAATGACAGCTaGTTGGGAATGTGTTCTAGT | + |
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Preference number: 2 (lower is better) Translates to: CFLSLRKAKPFICIPGSPAGNDS*LGMCSS Trigger: ACTAGAACACATTCCCAAGCAGCTGTCATTGCCAGC...AGGGCTGCCAGGGATACATATGAAGGGCTTAGCTTTCCTTAGGGAAAGAAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTGTTTCATTTGTACTTTCAGGACTTATTTTGGAGATGCCAGTACCACACTGCGGTCAAAGGGCAGATaGGACCTGTGGCTGGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: ICFICTFRTYFGDASTTLRSKGR*DLWLVK Trigger: CTTGACCAGCCACAGGTCTCATCTGCCCTTTGACCG...CAGTGTGGTACTGGCATCTCCAAAATAAGTCCTGAAAGTACAAATGAAACAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR CAA 90 bp | CCTGTAACCCCATACCTTGTTCTTTGTGCTCTTAATGATCATCTATaGACGACCTTTGCAGTGTTGTCCCACCAAAGTGCTTTCTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: PVTPYLVLCALNDHL*TTFAVLSHQSAFFP Trigger: GGGAAAGAAAGCACTTTGGTGGGACAACACTGCAAAGGTCGTCAATAGATGATCATTAAGAGCACAAAGAACAAGGTATGGGGTTACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR TCA 90 bp | AGCTGCTGGGATAACCTGTCAGATCCATCCTTACTTGGTTTTTATGGTACCAGATTCAGAACTCCATTCTaGAATAGGCTGGTATCACCT | + |
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Preference number: 2 (lower is better) Translates to: SCWDNLSDPSLLGFYGTRFRTPF*NRLVSP Trigger: AGGTGATACCAGCCTATTTCAGAATGGAGTTCTGAA...TCTGGTACCATAAAAACCAAGTAAGGATGGATCTGACAGGTTATCCCAGCAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTGTTTCATTTGTACTTTCAGGACTTATTTTGGAGATGCCAGTACCACACTGAATGTTCTTTCCCCTTaGCTGGTTAGAAAGGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: ICFICTFRTYFGDASTTLNVLSP*LVRKGV Trigger: AACCCCCTTTCTAACCAGTCAAGGGGAAAGAACATT...CAGTGTGGTACTGGCATCTCCAAAATAAGTCCTGAAAGTACAAATGAAACAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR CCA 90 bp | ATCTGTTTCATTTGTACTTTCAGGACTTATTTTGGAGATGCCAGTACCACACTGCATTCTGAAATAGGCTaGTATCACCTGGGAACAGAG | + |
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Preference number: 2 (lower is better) Translates to: ICFICTFRTYFGDASTTLHSEIG*YHLGTE Trigger: CTCTGTTCCCAGGTGATACCAGCCTATTTCAGAATG...CAGTGTGGTACTGGCATCTCCAAAATAAGTCCTGAAAGTACAAATGAAACAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTGTTTCATTTGTACTTTCAGGACTTATTTTGGAGATGCCAGTACCACACTGGGTGTTTCTGTGCTGTaGCTTACAAATAAATCACTG | + |
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Preference number: 2 (lower is better) Translates to: ICFICTFRTYFGDASTTLGVSVL*LTNKSL Trigger: CAGTGATTTATTTGTAAGTCACAGCACAGAAACACC...CAGTGTGGTACTGGCATCTCCAAAATAAGTCCTGAAAGTACAAATGAAACAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR CCA 72 bp | CCTGGGGGCGGTCAAAGGGCAGATGAGACCTGTGGCTaGTCAAGTAAGCCAGCTAGCAGGACCAGGCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: PGGGQRADETCG*SSKPASRTRLL Trigger: CAGGAGCCTGGTCCTGCTAGCTGGCTTACTTGACCAGCCACAGGTCTCATCTGCCCTTTGACCGCCCCCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR CCA 72 bp | TGGTTCGTTCCCACAGTAGGCCCAGAGGACCACTCTTaGCCCCTAACAAAGGCCCAGAAGGTGGGTGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: WFVPTVGPEDHS*PLTKAQKVGVW Trigger: CCAGACACCCACCTTCTGGGCCTTTGTTAGGGGCCAAGAGTGGTCCTCTGGGCCTACTGTGGGAACGAACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR CCA 72 bp | GGGAACAGAGAGCTGCCTTTCTACCCAGTGAGCACCTaGATCTCCGCTCTCAGGCAGGCACTCTCCTTCACT | + |
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Preference number: 3 (lower is better) Translates to: GNRELPFYPVST*ISALRQALSFT Trigger: AGTGAAGGAGAGTGCCTGCCTGAGAGCGGAGATCCAGGTGCTCACTGGGTAGAAAGGCAGCTCTCTGTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR TCA 72 bp | TATCACCTGGGAACAGAGAGCTGCCTTTCTACCCAGTaGGCACCTGGATCTCCGCTCTCAGGCAGGCACTCT | + |
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Preference number: 3 (lower is better) Translates to: YHLGTESCLSTQ*APGSPLSGRHS Trigger: AGAGTGCCTGCCTGAGAGCGGAGATCCAGGTGCTCACTGGGTAGAAAGGCAGCTCTCTGTTCCCAGGTGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR TCA 72 bp | AGGCCAGGGAAAAAGGACAGTGTAGCTACAGGGGAGTaGGCAAGGGAGGTGGGAAACCAGCCTGGACTATTC | + |
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Preference number: 3 (lower is better) Translates to: RPGKKDSVATGE*AREVGNQPGLF Trigger: GAATAGTCCAGGCTGGTTTCCCACCTCCCTTGCTCACTCCCCTGTAGCTACACTGTCCTTTTTCCCTGGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR CAA 90 bp | GCGGTCAAAGGGCAGATGAGACCTGTGGCTGGTCAAGTAAGCCAGCTAGCAGGAAGTACAGTGCTCACTTaGACCACAGGCCATGACAGA | + |
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Preference number: 3 (lower is better) Translates to: AVKGQMRPVAGQVSQLAGSTVLT*TTGHDR Trigger: TCTGTCATGGCCTGTGGTCAAAGTGAGCACTGTACT...TCCTGCTAGCTGGCTTACTTGACCAGCCACAGGTCTCATCTGCCCTTTGACCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR CAA 90 bp | AATGAAAATGGCATCGCTTTAATAGCCTCACGTTTGGGGTGTCCCGTGTATGTGCCCAGAGGACCACTCTaGGCCCCTAACAAAGGCCCA | + |
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Preference number: 3 (lower is better) Translates to: NENGIALIASRLGCPVYVPRGPL*APNKGP Trigger: TGGGCCTTTGTTAGGGGCCAAGAGTGGTCCTCTGGG...CACATACACGGGACACCCCAAACGTGAGGCTATTAAAGCGATGCCATTTTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR TCA 72 bp | GCTGGTCAAGTAAGCCAGCTAGCAGGACCAGGCTCCTaGAGAACACTGCTGGCTAGTAAAACATACGTTTTC | + |
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Preference number: 3 (lower is better) Translates to: AGQVSQLAGPGS*RTLLASKTYVF Trigger: GAAAACGTATGTTTTACTAGCCAGCAGTGTTCTTCAGGAGCCTGGTCCTGCTAGCTGGCTTACTTGACCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR TCA 72 bp | GATCCATCCTTACTTGGTTTTTATGGTACCAGACTTTaGCACAGACCAGGAACCTCTCCTGGGGGCGGTCAA | + |
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Preference number: 3 (lower is better) Translates to: DPSLLGFYGTRL*HRPGTSPGGGQ Trigger: TTGACCGCCCCCAGGAGAGGTTCCTGGTCTGTGTCAAAGTCTGGTACCATAAAAACCAAGTAAGGATGGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR CCA 72 bp | AGCCTGTTTCCTTCAGAACTCCATTCTGAAATAGGCTaGTATCACCTGGGAACAGAGAGCTGCCTTTCTACC | + |
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Preference number: 3 (lower is better) Translates to: SLFPSELHSEIG*YHLGTESCLST Trigger: GGTAGAAAGGCAGCTCTCTGTTCCCAGGTGATACCAGCCTATTTCAGAATGGAGTTCTGAAGGAAACAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR-3UTR CAA 90 bp | AATGAAAATGGCATCGCTTTAATAGCCTCACGTTTGGGGTGTCCCGTGTATGTGGGCAATGACAGCTGCTaGGGAATGTGTTCTAGTTAC | + |
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Preference number: 3 (lower is better) Translates to: NENGIALIASRLGCPVYVGNDSC*GMCSSY Trigger: GTAACTAGAACACATTCCCAAGCAGCTGTCATTGCC...CACATACACGGGACACCCCAAACGTGAGGCTATTAAAGCGATGCCATTTTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR TCA 72 bp | AGTGGACCACAACTCCAGGGTGGTGTTTCTGTGCTGTaGCTTACAAATAAATCACTGTTGGAGAGCTACTAC | + |
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Preference number: 3 (lower is better) Translates to: SGPQLQGGVSVL*LTNKSLLESYY Trigger: GTAGTAGCTCTCCAACAGTGATTTATTTGTAAGTCACAGCACAGAAACACCACCCTGGAGTTGTGGTCCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR TCA 72 bp | CTTTCAGGACTTATTTTGGAGATGCCAGTACCACACTaGCCTTTTGTGCTTCTTAGTGGCTTCGCCATGGTT | + |
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Preference number: 3 (lower is better) Translates to: LSGLILEMPVPH*PFVLLSGFAMV Trigger: AACCATGGCGAAGCCACTAAGAAGCACAAAAGGTCAGTGTGGTACTGGCATCTCCAAAATAAGTCCTGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR CCA 72 bp | CAACCAGGTTCTAGTTGGCTGGCAATGACAGCTGCTTaGGAATGTGTTCTAGTTACTACTTTATTCCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: QPGSSWLAMTAA*ECVLVTTLFLA Trigger: TGCCAGGAATAAAGTAGTAACTAGAACACATTCCCAAGCAGCTGTCATTGCCAGCCAACTAGAACCTGGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR GCA 72 bp | TCTATTGACGACCTTTGCAGTGTTGTCCCACCAAAGTaGTTTCTTTCCCTAAGGAAAGCTAAGCCCTTCATA | + |
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Preference number: 3 (lower is better) Translates to: SIDDLCSVVPPK*FLSLRKAKPFI Trigger: TATGAAGGGCTTAGCTTTCCTTAGGGAAAGAAAGCACTTTGGTGGGACAACACTGCAAAGGTCGTCAATAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| 3UTR TCA 72 bp | CATACCTTGTTCTTTGTGCTCTTAATGATCATCTATTaGCGACCTTTGCAGTGTTGTCCCACCAAAGTGCTT | + |
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Preference number: 3 (lower is better) Translates to: HTLFFVLLMIIY*RPLQCCPTKVL Trigger: AAGCACTTTGGTGGGACAACACTGCAAAGGTCGTCAATAGATGATCATTAAGAGCACAAAGAACAAGGTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| CDS-3UTR CCA 90 bp | GACACTGAGGCCAGGGAAAAAGGACAGTGTAGCTACAGGGGAGTGAGCAAGGGAGCCGTGACAAGGAGCTaGGAGTCAGGGGAAAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: DTEAREKGQCSYRGVSKGAVTRS*ESGEKV Trigger: GACCTTTTCCCCTGACTCCCAGCTCCTTGTCACGGC...TCCCTTGCTCACTCCCCTGTAGCTACACTGTCCTTTTTCCCTGGCCTCAGTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| CDS-3UTR TCA 90 bp | TGCTTTCTTTCCCTAAGGAAAGCTAAGCCCTTCATATGTATCCCTGGCAGCCCTGACACCACCCCGAGCTaGTGTCCCTCCAGGCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: CFLSLRKAKPFICIPGSPDTTPS*CPSRLH Trigger: GTGGAGCCTGGAGGGACATCAGCTCGGGGTGGTGTC...AGGGCTGCCAGGGATACATATGAAGGGCTTAGCTTTCCTTAGGGAAAGAAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| CDS-3UTR TCA 90 bp | CTGAAACCTTCCCCATTACCATGCAGACCCAGTCCAGAGGTGACTGCAGAGAAGTGGGAAGAGTGTGGCTaGTGTCCACAGACACCACCC | + |
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Preference number: 4 (lower is better) Translates to: LKPSPLPCRPSPEVTAEKWEECG*CPQTPP Trigger: GGGTGGTGTCTGTGGACATCAGCCACACTCTTCCCA...CTTCTCTGCAGTCACCTCTGGACTGGGTCTGCATGGTAATGGGGAAGGTTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| CDS-3UTR CCA 90 bp | GCGGTCAAAGGGCAGATGAGACCTGTGGCTGGTCAAGTAAGCCAGCTAGCAGGACCTGTGGCCAGATACTaGGAGTCAGGAGAAAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: AVKGQMRPVAGQVSQLAGPVARY*ESGENA Trigger: GGCATTTTCTCCTGACTCCCAGTATCTGGCCACAGG...TCCTGCTAGCTGGCTTACTTGACCAGCCACAGGTCTCATCTGCCCTTTGACCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR CCA 90 bp | GACACTGAGGCCAGGGAAAAAGGACAGTGTAGCTACAGGGGAGTGAGCAAGGGAAGGTCAAGGAGCGAATaGGCATCGCATGGCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DTEAREKGQCSYRGVSKGRSRSE*ASHGLP Trigger: TGGAAGGCCATGCGATGCCCATTCGCTCCTTGACCT...TCCCTTGCTCACTCCCCTGTAGCTACACTGTCCTTTTTCCCTGGCCTCAGTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR GCA 90 bp | GAACAGAGAGCTGCCTTTCTACCCAGTGAGCACCTGGATCTCCGCTCTCAGGCACATGGCCACTCAGTGTaGCAGCCAAATTGGCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: EQRAAFLPSEHLDLRSQAHGHSV*QPNWHV Trigger: AACATGCCAATTTGGCTGGCACACTGAGTGGCCATG...TGCCTGAGAGCGGAGATCCAGGTGCTCACTGGGTAGAAAGGCAGCTCTCTGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAACCTTCCCCATTACCATGCAGACCCAGTCCAGAGGTGACTGCAGAGAAGCCATGTGAGTTCCTGTaGCCAGATACTGGGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKPSPLPCRPSPEVTAEKPCEFL*PDTGSQ Trigger: CTGACTCCCAGTATCTGGCCACAGGAACTCACATGG...CTTCTCTGCAGTCACCTCTGGACTGGGTCTGCATGGTAATGGGGAAGGTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR TCA 90 bp | TATTCTAAGGAGCTAGGCCTGAGGACAGGCACAATGTGGCCAGGCACAGAGTTTTCCCAGAGGCGAATATaGGCGTCTAGAGAGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YSKELGLRTGTMWPGTEFSQRRI*ASRELD Trigger: ATCCAGCTCTCTAGACGCTCATATTCGCCTCTGGGA...AAACTCTGTGCCTGGCCACATTGTGCCTGTCCTCAGGCCTAGCTCCTTAGAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR TCA 90 bp | CTGAAACCTTCCCCATTACCATGCAGACCCAGTCCAGAGGTGACTGCAGAGAAGTTCACTTTCCCCATGTaGGTTCCTGTGGCCAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: LKPSPLPCRPSPEVTAEKFTFPM*VPVARY Trigger: GTATCTGGCCACAGGAACTCACATGGGGAAAGTGAA...CTTCTCTGCAGTCACCTCTGGACTGGGTCTGCATGGTAATGGGGAAGGTTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR GCA 90 bp | CTGAAACCTTCCCCATTACCATGCAGACCCAGTCCAGAGGTGACTGCAGAGAAGTGGCCTTCCAGCGTATaGAAAAGCTTTCCAGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LKPSPLPCRPSPEVTAEKWPSSV*KSFPVA Trigger: TGCAACTGGAAAGCTTTTGCATACGCTGGAAGGCCA...CTTCTCTGCAGTCACCTCTGGACTGGGTCTGCATGGTAATGGGGAAGGTTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR CCA 90 bp | CCACAGGCCATGACAGACTTAAAACTGCTTCCTCCAATTAATAAGTGGACCACAAACACCCAGGACGCATaGCCACTCAGTGTGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PQAMTDLKLLPPINKWTTNTQDA*PLSVPA Trigger: GGCTGGCACACTGAGTGGCCATGCGTCCTGGGTGTT...TGTGGTCCACTTATTAATTGGAGGAAGCAGTTTTAAGTCTGTCATGGCCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR TCA 90 bp | CTGAAACCTTCCCCATTACCATGCAGACCCAGTCCAGAGGTGACTGCAGAGAAGCATCCAGGGATCCTGTaGCCACTGTTTCAATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKPSPLPCRPSPEVTAEKHPGIL*PLFQCF Trigger: AAAACATTGAAACAGTGGTCACAGGATCCCTGGATG...CTTCTCTGCAGTCACCTCTGGACTGGGTCTGCATGGTAATGGGGAAGGTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTTCTTTCCCTAAGGAAAGCTAAGCCCTTCATATGTATCCCTGGCAGCCCTGCAATGGGAAGAGTGTaGCTGATGTCCACAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: CFLSLRKAKPFICIPGSPAMGRV*LMSTDT Trigger: GGTGTCTGTGGACATCAGCCACACTCTTCCCATTGC...AGGGCTGCCAGGGATACATATGAAGGGCTTAGCTTTCCTTAGGGAAAGAAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTTCTTTCCCTAAGGAAAGCTAAGCCCTTCATATGTATCCCTGGCAGCCCTCGAATGGGCATCGCATaGCCTTCCAGCGTATGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CFLSLRKAKPFICIPGSPRMGIA*PSSVCK Trigger: TTTGCATACGCTGGAAGGCCATGCGATGCCCATTCG...AGGGCTGCCAGGGATACATATGAAGGGCTTAGCTTTCCTTAGGGAAAGAAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR TCA 90 bp | AATGAAAATGGCATCGCTTTAATAGCCTCACGTTTGGGGTGTCCCGTGTATGTGGATGTAGCCATCATCTaGAGCCGTGACAAGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NENGIALIASRLGCPVYVDVAII*SRDKEL Trigger: CAGCTCCTTGTCACGGCTTCAGATGATGGCTACATC...CACATACACGGGACACCCCAAACGTGAGGCTATTAAAGCGATGCCATTTTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTTCTTTCCCTAAGGAAAGCTAAGCCCTTCATATGTATCCCTGGCAGCCCTGGAGTCAGGAGAAAATaGCAAAGTCCAGGCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CFLSLRKAKPFICIPGSPGVRRK*QSPGIH Trigger: GTGGATGCCTGGACTTTGGCATTTTCTCCTGACTCC...AGGGCTGCCAGGGATACATATGAAGGGCTTAGCTTTCCTTAGGGAAAGAAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR CCA 90 bp | AATGAAAATGGCATCGCTTTAATAGCCTCACGTTTGGGGTGTCCCGTGTATGTGGAGCGTCTAGAGAGCTaGATGCAGCAATGGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NENGIALIASRLGCPVYVERLES*MQQWEE Trigger: CTCTTCCCATTGCTGCATCCAGCTCTCTAGACGCTC...CACATACACGGGACACCCCAAACGTGAGGCTATTAAAGCGATGCCATTTTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR CCA 90 bp | CCACAGGCCATGACAGACTTAAAACTGCTTCCTCCAATTAATAAGTGGACCACACGTCTATGGCTCCGCTaGCCAGGTATTTCCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: PQAMTDLKLLPPINKWTTRLWLR*PGISHQ Trigger: CTGATGGGAAATACCTGGCCAGCGGAGCCATAGACG...TGTGGTCCACTTATTAATTGGAGGAAGCAGTTTTAAGTCTGTCATGGCCTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTTCTTTCCCTAAGGAAAGCTAAGCCCTTCATATGTATCCCTGGCAGCCCTGGGCTTGCTCTTGCTTaGAGAGAATACTGTACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CFLSLRKAKPFICIPGSPGLALA*REYCTG Trigger: ACCAGTACAGTATTCTCTTCAAGCAAGAGCAAGCCC...AGGGCTGCCAGGGATACATATGAAGGGCTTAGCTTTCCTTAGGGAAAGAAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR TCA 90 bp | AATGAAAATGGCATCGCTTTAATAGCCTCACGTTTGGGGTGTCCCGTGTATGTGTGTCTCCCAGGCAACTaGCCATATGGCATCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: NENGIALIASRLGCPVYVCLPGN*PYGIIM Trigger: CATGATGATGCCATATGGTCAGTTGCCTGGGAGACA...CACATACACGGGACACCCCAAACGTGAGGCTATTAAAGCGATGCCATTTTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCTCTTAATGATCATCTATTGACGACCTTTGCAGTGTTGTCCCACCAAAGTCATCATCTGAAGCCGTaGCAAGGAGCTGGGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CALNDHLLTTFAVLSHQSHHLKP*QGAGSQ Trigger: CTGACTCCCAGCTCCTTGTCACGGCTTCAGATGATG...ACTTTGGTGGGACAACACTGCAAAGGTCGTCAATAGATGATCATTAAGAGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR CCA 90 bp | AATGAAAATGGCATCGCTTTAATAGCCTCACGTTTGGGGTGTCCCGTGTATGTGAGGCAACTGACCATATaGCATCATCATGGGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NENGIALIASRLGCPVYVRQLTI*HHHGLA Trigger: AGCAAGCCCATGATGATGCCATATGGTCAGTTGCCT...CACATACACGGGACACCCCAAACGTGAGGCTATTAAAGCGATGCCATTTTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR TCA 90 bp | CCACAGGCCATGACAGACTTAAAACTGCTTCCTCCAATTAATAAGTGGACCACAGAACTGGAGACAAAGTaGGTGTCATCAGGACAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PQAMTDLKLLPPINKWTTELETK*VSSGQN Trigger: GTTCTGTCCTGATGACACTCACTTTGTCTCCAGTTC...TGTGGTCCACTTATTAATTGGAGGAAGCAGTTTTAAGTCTGTCATGGCCTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR GCA 90 bp | TATTCTAAGGAGCTAGGCCTGAGGACAGGCACAATGTGGCCAGGCACAGAGTTTCCCATCAGGACTATATaGAATACTAAGGATGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: YSKELGLRTGTMWPGTEFPIRTI*NTKDEF Trigger: AAATTCATCCTTAGTATTGCATATAGTCCTGATGGG...AAACTCTGTGCCTGGCCACATTGTGCCTGTCCTCAGGCCTAGCTCCTTAGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| 3UTR CAA 72 bp | CCATACCTTGTTCTTTGTGCTCTTAATGATCATCTATaGACGACCTTTGCAGTGTTGTCCCACCAAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PYLVLCALNDHL*TTFAVLSHQSA Trigger: AGCACTTTGGTGGGACAACACTGCAAAGGTCGTCAATAGATGATCATTAAGAGCACAAAGAACAAGGTATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR TCA 90 bp | CCACAGGCCATGACAGACTTAAAACTGCTTCCTCCAATTAATAAGTGGACCACAGTACATCATAGATCTTaGTGTAGCCATCATCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PQAMTDLKLLPPINKWTTVHHRS*CSHHLK Trigger: CTTCAGATGATGGCTACATCAAGATCTATGATGTAC...TGTGGTCCACTTATTAATTGGAGGAAGCAGTTTTAAGTCTGTCATGGCCTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCTCTTAATGATCATCTATTGACGACCTTTGCAGTGTTGTCCCACCAAAGTGTGTGCCAGCCAAATTaGCATGTTGTACATCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: CALNDHLLTTFAVLSHQSVCQPN*HVVHHR Trigger: TCTATGATGTACAACATGCCAATTTGGCTGGCACAC...ACTTTGGTGGGACAACACTGCAAAGGTCGTCAATAGATGATCATTAAGAGCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGCTGGGATAACCTGTCAGATCCATCCTTACTTGGTTTTTATGGTACCAGATTTTGTCAGATGAACTaGAGACAAAGTGAGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SCWDNLSDPSLLGFYGTRFCQMN*RQSECH Trigger: ATGACACTCACTTTGTCTCCAGTTCATCTGACAAAA...TCTGGTACCATAAAAACCAAGTAAGGATGGATCTGACAGGTTATCCCAGCAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| 3UTR CAA 72 bp | CAATCCCCTCTAGTCTGCATATGGAATCTGTTTCATTaGTACTTTCAGGACTTATTTTGGAGATGCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QSPLVCIWNLFH*YFQDLFWRCQY Trigger: GTACTGGCATCTCCAAAATAAGTCCTGAAAGTACAAATGAAACAGATTCCATATGCAGACTAGAGGGGATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS TCA 90 bp | TATGAGCGTCTAGAGAGCTGGATGCAGCAATGGGAAGAGTGTGGCTaGTGTCCACAGACACCACCCCGAGCTGATGTCCCTCCAGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YERLESWMQQWEECG*CPQTPPRADVPPGS Trigger: GGAGCCTGGAGGGACATCAGCTCGGGGTGGTGTCTGTGGACATCAGCCACACTCTTCCCATTGCTGCATCCAGCTCTCTAGACGCTCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051822.13 ENSMUST00000118771.8 ENSMUST00000121204.8 |
||
| CDS-3UTR CAA 90 bp | TGGCCCCTAACAAAGGCCCAGAAGGTGGGTGTCTGGCCCATCTCTAGTCTGTGGTGGGCTTGCTCTTGCTaGAAGAGAATACTGTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: WPLTKAQKVGVWPISSLWWACSC*KRILYW Trigger: CCAGTACAGTATTCTCTTCAAGCAAGAGCAAGCCCA...CCACAGACTAGAGATGGGCCAGACACCCACCTTCTGGGCCTTTGTTAGGGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR CAA 90 bp | TGGCCCCTAACAAAGGCCCAGAAGGTGGGTGTCTGGCCCATCTCTAGTCTGTGGCAAACCTTCACACTTTaGTCAGATGAACTGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: WPLTKAQKVGVWPISSLWQTFTL*SDELET Trigger: TGTCTCCAGTTCATCTGACAAAAGTGTGAAGGTTTG...CCACAGACTAGAGATGGGCCAGACACCCACCTTCTGGGCCTTTGTTAGGGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR CAA 90 bp | CTGAAACCTTCCCCATTACCATGCAGACCCAGTCCAGAGGTGACTGCAGAGAAGGGCATCATCATGGGCTaGCTCTTGCTTGAAGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LKPSPLPCRPSPEVTAEKGIIMG*LLLEEN Trigger: ATTCTCTTCAAGCAAGAGCAAGCCCATGATGATGCC...CTTCTCTGCAGTCACCTCTGGACTGGGTCTGCATGGTAATGGGGAAGGTTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR CAA 90 bp | TATTCTAAGGAGCTAGGCCTGAGGACAGGCACAATGTGGCCAGGCACAGAGTTTTGTGAATACAGGTCCTaGTTCCAACATCCCAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: YSKELGLRTGTMWPGTEFCEYRS*FQHPKP Trigger: AGGTTTGGGATGTTGGAACAAGGACCTGTATTCACA...AAACTCTGTGCCTGGCCACATTGTGCCTGTCCTCAGGCCTAGCTCCTTAGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS TCA 90 bp | CATCACGCCATTTCCAGACCTTCACCAGGTCATCCAGGGATCCTGTaGCCACTGTTTCAATGTTTTCCTTTTTGTTTGTCTCCCAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: HHAISRPSPGHPGIL*PLFQCFPFCLSPRQ Trigger: TTGCCTGGGAGACAAACAAAAAGGAAAACATTGAAACAGTGGTCACAGGATCCCTGGATGACCTGGTGAAGGTCTGGAAATGGCGTGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051822.13 ENSMUST00000118771.8 ENSMUST00000121204.8 |
||
| CDS TCA 90 bp | CAAATTGGCATGTTGTACATCATAGATCTTGATGTAGCCATCATCTaGAGCCGTGACAAGGAGCTGGGAGTCAGGGGAAAAGGTCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QIGMLYIIDLDVAII*SRDKELGVRGKGQG Trigger: TCCTTGACCTTTTCCCCTGACTCCCAGCTCCTTGTCACGGCTTCAGATGATGGCTACATCAAGATCTATGATGTACAACATGCCAATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000051822.13 ENSMUST00000118771.8 ENSMUST00000121204.8 ENSMUST00000130368.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGCAGAGTCACCAAGGGTATGAGCTCAGGTCTGGTAGTAACATTTCTGAATTGTTTTCCTTTTTGTTaGTCTCCCAGGCAACTGACC | + |
|
Preference number: 5 (lower is better) Translates to: LGRVTKGMSSGLVVTFLNCFPFC*SPRQLT Trigger: GGTCAGTTGCCTGGGAGACAAACAAAAAGGAAAACA...ATTCAGAAATGTTACTACCAGACCTGAGCTCATACCCTTGGTGACTCTGCCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR CAA 90 bp | TATTCTAAGGAGCTAGGCCTGAGGACAGGCACAATGTGGCCAGGCACAGAGTTTGCAATGTCAAAAATATaGATGATTCCGTCTATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: YSKELGLRTGTMWPGTEFAMSKI*MIPSMA Trigger: AGCCATAGACGGAATCATCAATATTTTTGACATTGC...AAACTCTGTGCCTGGCCACATTGTGCCTGTCCTCAGGCCTAGCTCCTTAGAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTTCTTTCCCTAAGGAAAGCTAAGCCCTTCATATGTATCCCTGGCAGCCCTTCAATGTTTTCCTTTTaGTTTGTCTCCCAGGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: CFLSLRKAKPFICIPGSPSMFSF*FVSQAT Trigger: AGTTGCCTGGGAGACAAACAAAAAGGAAAACATTGA...AGGGCTGCCAGGGATACATATGAAGGGCTTAGCTTTCCTTAGGGAAAGAAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
||
| CDS TCA 90 bp | GACCACTGTTTCAATGTTTTCCTTTTTGTTTGTCTCCCAGGCAACTaGCCATATGGCATCATCATGGGCTTGCTCTTGCTTGAAGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: DHCFNVFLFVCLPGN*PYGIIMGLLLLEEN Trigger: ATTCTCTTCAAGCAAGAGCAAGCCCATGATGATGCCATATGGTCAGTTGCCTGGGAGACAAACAAAAAGGAAAACATTGAAACAGTGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051822.13 ENSMUST00000118771.8 ENSMUST00000121204.8 |
||
| CDS TCA 72 bp | AGAGTGTGGCTGATGTCCACAGACACCACCCCGAGCTaGTGTCCCTCCAGGCTCCACTGGAGCTCCAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RVWLMSTDTTPS*CPSRLHWSSSL Trigger: GAGGCTGGAGCTCCAGTGGAGCCTGGAGGGACATCAGCTCGGGGTGGTGTCTGTGGACATCAGCCACACTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051822.13 ENSMUST00000118771.8 ENSMUST00000121204.8 |
||
| CDS CCA 72 bp | TCAGGACAGAACGCAACATTCAACACCCAGGACGCATaGCCACTCAGTGTGCCAGCCAAATTGGCATGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SGQNATFNTQDA*PLSVPAKLACC Trigger: ACAACATGCCAATTTGGCTGGCACACTGAGTGGCCATGCGTCCTGGGTGTTGAATGTTGCGTTCTGTCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051822.13 ENSMUST00000118771.8 ENSMUST00000121204.8 ENSMUST00000130368.8 |
||
| CDS TCA 72 bp | CCACTTTCCACACCAAAAATGTTCACTTTCCCCATGTaGGTTCCTGTGGCCAGATACTGGGAGTCAGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PLSTPKMFTFPM*VPVARYWESGE Trigger: TTCTCCTGACTCCCAGTATCTGGCCACAGGAACTCACATGGGGAAAGTGAACATTTTTGGTGTGGAAAGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000051822.13 ENSMUST00000118771.8 ENSMUST00000121204.8 ENSMUST00000127451.2 ENSMUST00000130368.8 |
||
| CDS GCA 72 bp | TCCCAGGCAACTGACCATATGGCATCATCATGGGCTTaGTCTTGCTTGAAGAGAATACTGTACTGGTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SQATDHMASSWA*SCLKRILYWLV Trigger: GACCAACCAGTACAGTATTCTCTTCAAGCAAGAGCAAGCCCATGATGATGCCATATGGTCAGTTGCCTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051822.13 ENSMUST00000118771.8 ENSMUST00000121204.8 |
||
| CDS GCA 72 bp | CAACATTCAACACCCAGGACGCATGGCCACTCAGTGTaGCAGCCAAATTGGCATGTTGTACATCATAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: QHSTPRTHGHSV*QPNWHVVHHRS Trigger: AGATCTATGATGTACAACATGCCAATTTGGCTGGCACACTGAGTGGCCATGCGTCCTGGGTGTTGAATGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051822.13 ENSMUST00000118771.8 ENSMUST00000121204.8 ENSMUST00000130368.8 |
||
| CDS CAA 90 bp | CCTTCCAGCGTATGCAAAAGCTTTCCAGTTGCAATGTCAAAAATATaGATGATTCCGTCTATGGCTCCGCTGGCCAGGTATTTCCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: PSSVCKSFPVAMSKI*MIPSMAPLARYFPS Trigger: TGATGGGAAATACCTGGCCAGCGGAGCCATAGACGGAATCATCAATATTTTTGACATTGCAACTGGAAAGCTTTTGCATACGCTGGAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000051822.13 ENSMUST00000118771.8 ENSMUST00000121204.8 ENSMUST00000127451.2 ENSMUST00000130368.8 |
||
| CDS CAA 90 bp | CCCAAACCTGATCCTGGTGATCAAAGAAGGTGTGAATACAGGTCCTaGTTCCAACATCCCAAACCTTCACACTTTTGTCAGATGAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: PKPDPGDQRRCEYRS*FQHPKPSHFCQMNW Trigger: CCAGTTCATCTGACAAAAGTGTGAAGGTTTGGGATGTTGGAACAAGGACCTGTATTCACACCTTCTTTGATCACCAGGATCAGGTTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051822.13 ENSMUST00000121204.8 ENSMUST00000130368.8 |
||
| CDS CAA 90 bp | TGCTCTCCTGATCCTGGTGATCAAAGAAGGTGTGAATACAGGTCCTaGTTCCAACATCCCAAACCTTCACACTTTTGTCAGATGAACTGG | + |
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Preference number: 6 (lower is better) Translates to: CSPDPGDQRRCEYRS*FQHPKPSHFCQMNW Trigger: CCAGTTCATCTGACAAAAGTGTGAAGGTTTGGGATGTTGGAACAAGGACCTGTATTCACACCTTCTTTGATCACCAGGATCAGGAGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118771.8 |
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| CDS TCA 72 bp | ATGTTGTACATCATAGATCTTGATGTAGCCATCATCTaGAGCCGTGACAAGGAGCTGGGAGTCAGGGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: MLYIIDLDVAII*SRDKELGVRGK Trigger: TTTTCCCCTGACTCCCAGCTCCTTGTCACGGCTTCAGATGATGGCTACATCAAGATCTATGATGTACAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000051822.13 ENSMUST00000118771.8 ENSMUST00000121204.8 ENSMUST00000130368.8 |
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