Pregenerated sensors for WDR55 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042660Ensembl transcript IDs: ENSMUST00000049323.9, ENSMUST00000235748.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATGATTCCATCCGTGGAGCCAGTGCACAACAGATTCTCAGTGACTaGAACTATGCAGTCGATGGACTCTGCTCTCAGGGCAAAGCGGTC | + |
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Preference number: 1 (lower is better) Translates to: DDSIRGASAQQILSD*NYAVDGLCSQGKAV Trigger: GACCGCTTTGCCCTGAGAGCAGAGTCCATCGACTGCATAGTTCCAGTCACTGAGAATCTGTTGTGCACTGGCTCCACGGATGGAATCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235748.2 |
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| 3UTR GCA 90 bp | GCACAACAGATTCTCAGTGACTGGAACTATGCAGTCGATGGACTCTaGTCTCAGGGCAAAGCGGTCACTTGTAGCCCCAAAACCATTCCA | + |
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Preference number: 1 (lower is better) Translates to: AQQILSDWNYAVDGL*SQGKAVTCSPKTIP Trigger: TGGAATGGTTTTGGGGCTACAAGTGACCGCTTTGCCCTGAGAGCAGAGTCCATCGACTGCATAGTTCCAGTCACTGAGAATCTGTTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235748.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTTCACAGCCCTGATGATTCCATCCGTGGAGCCAGTGCACAACAGATTCTCAGAACTATGCAGTCGATaGACTCTGCTCTCAGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: MFTALMIPSVEPVHNRFSELCSR*TLLSGQ Trigger: TTGCCCTGAGAGCAGAGTCCATCGACTGCATAGTTC...TGAGAATCTGTTGTGCACTGGCTCCACGGATGGAATCATCAGGGCTGTGAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235748.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGAGAACTGGCTGAACCAAAGAGCCCTTCCTCCCACCACTTGTCCCTGGTTTTGGTATACATGTGTCTaGTTGGTATACATGTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: LENWLNQRALPPTTCPWFWYTCV*LVYMCL Trigger: AAGACACATGTATACCAAGCAGACACATGTATACCA...AAACCAGGGACAAGTGGTGGGAGGAAGGGCTCTTTGGTTCAGCCAGTTCTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| 3UTR CCA 72 bp | ATCCGTGGAGCCAGTGCACAACAGATTCTCAGTGACTaGAACTATGCAGTCGATGGACTCTGCTCTCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: IRGASAQQILSD*NYAVDGLCSQG Trigger: GCCCTGAGAGCAGAGTCCATCGACTGCATAGTTCCAGTCACTGAGAATCTGTTGTGCACTGGCTCCACGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235748.2 |
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| 3UTR TCA 72 bp | TTCCATCCGTGGAGCCAGTGCACAACAGATTCTCAGTaGCTGGAACTATGCAGTCGATGGACTCTGCTCTCA | + |
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Preference number: 3 (lower is better) Translates to: FHPWSQCTTDSQ*LELCSRWTLLS Trigger: TGAGAGCAGAGTCCATCGACTGCATAGTTCCAGTCACTGAGAATCTGTTGTGCACTGGCTCCACGGATGGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235748.2 |
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| 3UTR GCA 72 bp | ATTCTCAGTGACTGGAACTATGCAGTCGATGGACTCTaGTCTCAGGGCAAAGCGGTCACTTGTAGCCCCAAA | + |
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Preference number: 3 (lower is better) Translates to: ILSDWNYAVDGL*SQGKAVTCSPK Trigger: TTTGGGGCTACAAGTGACCGCTTTGCCCTGAGAGCAGAGTCCATCGACTGCATAGTTCCAGTCACTGAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235748.2 |
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| 3UTR CCA 72 bp | CTGAACCAAAGAGCCCTTCCTCCCACCACTTGTCCCTaGTTTGGGCTTACATGGTTTTTGTTTTTCTATACT | + |
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Preference number: 3 (lower is better) Translates to: LNQRALPPTTCP*FGLTWFLFFYT Trigger: AGTATAGAAAAACAAAAACCATGTAAGCCCAAACCAGGGACAAGTGGTGGGAGGAAGGGCTCTTTGGTTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| 3UTR TCA 72 bp | GATAGGGGGAGCAAATACTTCCCTTCTTCGGGGCCCTaGGTTCATGTCATTTCTTACATGACACAGAATATA | + |
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Preference number: 3 (lower is better) Translates to: DRGSKYFPSSGP*VHVISYMTQNI Trigger: TATATTCTGTGTCATGTAAGAAATGACATGAACTCAGGGCCCCGAAGAAGGGAAGTATTTGCTCCCCCTATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR CCA 90 bp | TTTGGAGAACTGGCTGAACCAAAGAGCCCTTCCTCCCACCACTTGTCCCTGGTTCGCCAGGCCACTGGCTaGGGCTTCCAGCACGATGTC | + |
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Preference number: 4 (lower is better) Translates to: FGELAEPKSPSSHHLSLVRQATG*GFQHDV Trigger: GACATCGTGCTGGAAGCCCCAGCCAGTGGCCTGGCG...AACCAGGGACAAGTGGTGGGAGGAAGGGCTCTTTGGTTCAGCCAGTTCTCCAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR CCA 90 bp | CTGGCTGAACCAAAGAGCCCTTCCTCCCACCACTTGTCCCTGGTTTGGGCTTACGGTCGTGGCCACTACTaGCCAGAAAGTGGCCGCAAT | + |
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Preference number: 4 (lower is better) Translates to: LAEPKSPSSHHLSLVWAYGRGHY*PESGRN Trigger: ATTGCGGCCACTTTCTGGCCAGTAGTGGCCACGACC...GTAAGCCCAAACCAGGGACAAGTGGTGGGAGGAAGGGCTCTTTGGTTCAGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR GCA 90 bp | TTGGAGAACTGGCTGAACCAAAGAGCCCTTCCTCCCACCACTTGTCCCTGGTTTTCCGTCCACGTCCCCTaGTGCCAGCAGATCTCGAGT | + |
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Preference number: 4 (lower is better) Translates to: LENWLNQRALPPTTCPWFSVHVP*CQQISS Trigger: ACTCGAGATCTGCTGGCAGCAGGGGACGTGGACGGA...AAACCAGGGACAAGTGGTGGGAGGAAGGGCTCTTTGGTTCAGCCAGTTCTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR TCA 90 bp | ATAGGGGGAGCAAATACTTCCCTTCTTCGGGGCCCTGAGTTCATGTCATTTCTTCAGCCCGGCAGGACTTaGGGTGGTGTCCTGAGGACC | + |
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Preference number: 4 (lower is better) Translates to: IGGANTSLLRGPEFMSFLQPGRT*GGVLRT Trigger: GGTCCTCAGGACACCACCTCAAGTCCTGCCGGGCTG...AAGAAATGACATGAACTCAGGGCCCCGAAGAAGGGAAGTATTTGCTCCCCCTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR TCA 90 bp | AACCAAAGAGCCCTTCCTCCCACCACTTGTCCCTGGTTTGGGCTTACATGGTTTTCATGTCCCAAAACTTaGGGCGCTGGTCGTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: NQRALPPTTCPWFGLTWFSCPKT*GAGRGH Trigger: GTGGCCACGACCAGCGCCTCAAGTTTTGGGACATGA...AAACCATGTAAGCCCAAACCAGGGACAAGTGGTGGGAGGAAGGGCTCTTTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR CCA 90 bp | GAACTGGCTGAACCAAAGAGCCCTTCCTCCCACCACTTGTCCCTGGTTTGGGCTAGGACCAGAGTTCCTTaGTTTCTCCCTCCTGACAAG | + |
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Preference number: 4 (lower is better) Translates to: ELAEPKSPSSHHLSLVWARTRVP*FLPPDK Trigger: CTTGTCAGGAGGGAGAAACCAAGGAACTCTGGTCCT...AGCCCAAACCAGGGACAAGTGGTGGGAGGAAGGGCTCTTTGGTTCAGCCAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR CCA 90 bp | GAACTGGCTGAACCAAAGAGCCCTTCCTCCCACCACTTGTCCCTGGTTTGGGCTGAACTATGCAGTCGATaGACTCTGCTCTCAGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: ELAEPKSPSSHHLSLVWAELCSR*TLLSGQ Trigger: TTGCCCTGAGAGCAGAGTCCATCGACTGCATAGTTC...AGCCCAAACCAGGGACAAGTGGTGGGAGGAAGGGCTCTTTGGTTCAGCCAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR CCA 90 bp | TTTGGAGAACTGGCTGAACCAAAGAGCCCTTCCTCCCACCACTTGTCCCTGGTTCTACTGGCCAGAAAGTaGCCGCAATGGGATAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: FGELAEPKSPSSHHLSLVLLARK*PQWDRA Trigger: AGCCCTATCCCATTGCGGCCACTTTCTGGCCAGTAG...AACCAGGGACAAGTGGTGGGAGGAAGGGCTCTTTGGTTCAGCCAGTTCTCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR GCA 90 bp | GGAGAACTGGCTGAACCAAAGAGCCCTTCCTCCCACCACTTGTCCCTGGTTTGGATGTACTCCTCATGCTaGCGCATATCCATCAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: GELAEPKSPSSHHLSLVWMYSSC*RISIKG Trigger: CCCTTTGATGGATATGCGGCAGCATGAGGAGTACAT...CCAAACCAGGGACAAGTGGTGGGAGGAAGGGCTCTTTGGTTCAGCCAGTTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR CCA 90 bp | ATCATGTTCAAGGTGGTAGGTTCAATCTACAGCATCAACAGAGTTCTTTGGGGAGGAACGCCAGGCCACTaGCTGGGGCTTCCAGCACGA | + |
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Preference number: 4 (lower is better) Translates to: IMFKVVGSIYSINRVLWGGTPGH*LGLPAR Trigger: TCGTGCTGGAAGCCCCAGCCAGTGGCCTGGCGTTCC...TCCCCAAAGAACTCTGTTGATGCTGTAGATTGAACCTACCACCTTGAACATGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR CCA 90 bp | ATAGGGGGAGCAAATACTTCCCTTCTTCGGGGCCCTGAGTTCATGTCATTTCTTTTGAGGCGCTGGTCGTaGCCACTACTGGCCAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: IGGANTSLLRGPEFMSFLLRRWS*PLLARK Trigger: CTTTCTGGCCAGTAGTGGCCACGACCAGCGCCTCAA...AAGAAATGACATGAACTCAGGGCCCCGAAGAAGGGAAGTATTTGCTCCCCCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR TCA 90 bp | ATTCCATCCGTGGAGCCAGTGCACAACAGATTCTCAGTGACTGGAACTATGCAGCCAGCTGTACTTTCATaGGGGCGACGGAGGTTAGAT | + |
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Preference number: 4 (lower is better) Translates to: IPSVEPVHNRFSVTGTMQPAVLS*GRRRLD Trigger: ATCTAACCTCCGTCGCCCTCATGAAAGTACAGCTGG...CTGCATAGTTCCAGTCACTGAGAATCTGTTGTGCACTGGCTCCACGGATGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235748.2 |
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| CDS-3UTR CCA 90 bp | GGTAGAGCTGAGCTGATCATGTTCAAGGTGGTAGGTTCAATCTACAGCATCAACCCTCACCACCTCCTCTaGAGCCTTGGCATCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GRAELIMFKVVGSIYSINPHHLL*SLGILF Trigger: GAAGAGGATGCCAAGGCTCCAGAGGAGGTGGTGAGG...GTTGATGCTGTAGATTGAACCTACCACCTTGAACATGATCAGCTCAGCTCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR TCA 90 bp | GGTAGAGCTGAGCTGATCATGTTCAAGGTGGTAGGTTCAATCTACAGCATCAACTTTCTGCCCATCCTCTaGGAAGACAACAGCCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: GRAELIMFKVVGSIYSINFLPIL*EDNSPA Trigger: TGCCGGGCTGTTGTCTTCTCAGAGGATGGGCAGAAA...GTTGATGCTGTAGATTGAACCTACCACCTTGAACATGATCAGCTCAGCTCTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR CCA 90 bp | TTGGAGAACTGGCTGAACCAAAGAGCCCTTCCTCCCACCACTTGTCCCTGGTTTCAGATTCTCAGTGACTaGAACTATGCAGTCGATGGA | + |
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Preference number: 4 (lower is better) Translates to: LENWLNQRALPPTTCPWFQILSD*NYAVDG Trigger: TCCATCGACTGCATAGTTCCAGTCACTGAGAATCTG...AAACCAGGGACAAGTGGTGGGAGGAAGGGCTCTTTGGTTCAGCCAGTTCTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR GCA 90 bp | AACCAAAGAGCCCTTCCTCCCACCACTTGTCCCTGGTTTGGGCTTACATGGTTTACGGTAACAAGTTTCTaGCCATCCTCTGAGAAGACA | + |
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Preference number: 4 (lower is better) Translates to: NQRALPPTTCPWFGLTWFTVTSF*PSSEKT Trigger: TGTCTTCTCAGAGGATGGGCAGAAACTTGTTACCGT...AAACCATGTAAGCCCAAACCAGGGACAAGTGGTGGGAGGAAGGGCTCTTTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR CCA 90 bp | ATCATGTTCAAGGTGGTAGGTTCAATCTACAGCATCAACAGAGTTCTTTGGGGAAGATCTCGAGTCGGATaGAACGCCAGGCCACTGGCT | + |
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Preference number: 4 (lower is better) Translates to: IMFKVVGSIYSINRVLWGRSRVG*NARPLA Trigger: AGCCAGTGGCCTGGCGTTCCATCCGACTCGAGATCT...TCCCCAAAGAACTCTGTTGATGCTGTAGATTGAACCTACCACCTTGAACATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR CCA 90 bp | TCAATCTACAGCATCAACAGAGTTCTTTGGGGAAATCTGTCCCAGAAAACAGCTGGCAGCCATCCCCACTaGCTGTCAGCAGCAGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: SIYSINRVLWGNLSQKTAGSHPH*LSAAAF Trigger: AAAAGCTGCTGCTGACAGCCAGTGGGGATGGCTGCC...AGCTGTTTTCTGGGACAGATTTCCCCAAAGAACTCTGTTGATGCTGTAGATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| 3UTR CAA 72 bp | GAACTGGCTGAACCAAAGAGCCCTTCCTCCCACCACTaGTCCCTGGTTTGGGCTTACATGGTTTTTGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: ELAEPKSPSSHH*SLVWAYMVFVF Trigger: AAAAACAAAAACCATGTAAGCCCAAACCAGGGACAAGTGGTGGGAGGAAGGGCTCTTTGGTTCAGCCAGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR GCA 90 bp | GTGTCTTGCTGTAGTGGTCATAGAGTTTGTTTTACAATGATAGGGGGAGCAAATGCAGTCGATGGACTCTaGTCTCAGGGCAAAGCGGTC | + |
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Preference number: 4 (lower is better) Translates to: VSCCSGHRVCFTMIGGANAVDGL*SQGKAV Trigger: GACCGCTTTGCCCTGAGAGCAGAGTCCATCGACTGC...ATTTGCTCCCCCTATCATTGTAAAACAAACTCTATGACCACTACAGCAAGACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR CCA 90 bp | GTGTCTTGCTGTAGTGGTCATAGAGTTTGTTTTACAATGATAGGGGGAGCAAATCAGCACGATGTCTTCTaGGGTATCACGGATCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: VSCCSGHRVCFTMIGGANQHDVF*GITDPG Trigger: CCCCGGATCCGTGATACCCCAGAAGACATCGTGCTG...ATTTGCTCCCCCTATCATTGTAAAACAAACTCTATGACCACTACAGCAAGACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR CCA 90 bp | ATAATCAGTGGTAGAGCTGAGCTGATCATGTTCAAGGTGGTAGGTTCAATCTACCCTCCTCTGGAGCCTTaGCATCCTCTTCATCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: IISGRAELIMFKVVGSIYPPLEP*HPLHLP Trigger: GGGAAGATGAAGAGGATGCCAAGGCTCCAGAGGAGG...GTAGATTGAACCTACCACCTTGAACATGATCAGCTCAGCTCTACCACTGATTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR GCA 90 bp | TTCAATCTACAGCATCAACAGAGTTCTTTGGGGAAATCTGTCCCAGAAAACAGCGCCCTCCCTTTTTCTTaGGTCGCCGATAGTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: FNLQHQQSSLGKSVPENSALPFS*VADSHP Trigger: TGGATGACTATCGGCGACGCAAGAAAAAGGGAGGGC...GCTGTTTTCTGGGACAGATTTCCCCAAAGAACTCTGTTGATGCTGTAGATTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR CCA 90 bp | ATGTGTCTGCTTGGTATACATGTGTCTTGCTGTAGTGGTCATAGAGTTTGTTTTCGGCAGGACTTGAGGTaGTGTCCTGAGGACCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: MCLLGIHVSCCSGHRVCFRQDLR*CPEDQS Trigger: ACTCTGGTCCTCAGGACACCACCTCAAGTCCTGCCG...AAAACAAACTCTATGACCACTACAGCAAGACACATGTATACCAAGCAGACACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR CCA 90 bp | TGTCTGCTTGGTATACATGTGTCTTGCTGTAGTGGTCATAGAGTTTGTTTTACACAAAACTTGAGGCGCTaGTCGTGGCCACTACTGGCC | + |
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Preference number: 4 (lower is better) Translates to: CLLGIHVSCCSGHRVCFTQNLRR*SWPLLA Trigger: GGCCAGTAGTGGCCACGACCAGCGCCTCAAGTTTTG...TGTAAAACAAACTCTATGACCACTACAGCAAGACACATGTATACCAAGCAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR CCA 90 bp | CACCACTTGTCCCTGGTTTGGGCTTACATGGTTTTTGTTTTTCTATACTGGTTTACCTACCACTCGGTTTaGCAGGATGTTCACAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: HHLSLVWAYMVFVFLYWFTYHSV*QDVHSP Trigger: AGGGCTGTGAACATCCTGCCAAACCGAGTGGTAGGT...AAACCAGTATAGAAAAACAAAAACCATGTAAGCCCAAACCAGGGACAAGTGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR TCA 90 bp | TCAATCTACAGCATCAACAGAGTTCTTTGGGGAAATCTGTCCCAGAAAACAGCTTTCCTCTTCATTGTTTaGGTCCTCTGCAGGACTCTC | + |
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Preference number: 4 (lower is better) Translates to: SIYSINRVLWGNLSQKTAFLFIV*VLCRTL Trigger: GAGAGTCCTGCAGAGGACTCAAACAATGAAGAGGAA...AGCTGTTTTCTGGGACAGATTTCCCCAAAGAACTCTGTTGATGCTGTAGATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR TCA 90 bp | TTCAATCTACAGCATCAACAGAGTTCTTTGGGGAAATCTGTCCCAGAAAACAGCCAAAACCATTCCAGTTaGAGAGGTAGATGGTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: FNLQHQQSSLGKSVPENSQNHSS*RGRWSP Trigger: AGGGGACCATCTACCTCTTCAACTGGAATGGTTTTG...GCTGTTTTCTGGGACAGATTTCCCCAAAGAACTCTGTTGATGCTGTAGATTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR TCA 90 bp | TGTCTGCTTGGTATACATGTGTCTTGCTGTAGTGGTCATAGAGTTTGTTTTACAACCACGGTTCGAAGCTaGGTCATGTCCCAAAACTTG | + |
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Preference number: 4 (lower is better) Translates to: CLLGIHVSCCSGHRVCFTTTVRS*VMSQNL Trigger: CAAGTTTTGGGACATGACTCAGCTTCGAACCGTGGT...TGTAAAACAAACTCTATGACCACTACAGCAAGACACATGTATACCAAGCAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR GCA 90 bp | GTGTCTTGCTGTAGTGGTCATAGAGTTTGTTTTACAATGATAGGGGGAGCAAATGCAATGTACTCCTCATaGTGCCGCATATCCATCAAA | + |
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Preference number: 4 (lower is better) Translates to: VSCCSGHRVCFTMIGGANAMYSS*CRISIK Trigger: TTTGATGGATATGCGGCAGCATGAGGAGTACATTGC...ATTTGCTCCCCCTATCATTGTAAAACAAACTCTATGACCACTACAGCAAGACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR CCA 90 bp | TTCAATCTACAGCATCAACAGAGTTCTTTGGGGAAATCTGTCCCAGAAAACAGCTCGACATCTAAGATGTaGATTGCTTTGTCCTTAGAG | + |
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Preference number: 4 (lower is better) Translates to: FNLQHQQSSLGKSVPENSSTSKM*IALSLE Trigger: CTCTAAGGACAAAGCAATCCACATCTTAGATGTCGA...GCTGTTTTCTGGGACAGATTTCCCCAAAGAACTCTGTTGATGCTGTAGATTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CCA 90 bp | TTGAGGCGCTGGTCGTGGCCACTACTGGCCAGAAAGTGGCCGCAATaGGATAGGGCTAGCGCCTCCACAGGCTCCCCGGCATGCTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: LRRWSWPLLARKWPQ*DRASASTGSPACWP Trigger: GGGCCAGCATGCCGGGGAGCCTGTGGAGGCGCTAGCCCTATCCCATTGCGGCCACTTTCTGGCCAGTAGTGGCCACGACCAGCGCCTCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CCA 90 bp | CCGCAATGGGATAGGGCTAGCGCCTCCACAGGCTCCCCGGCATGCTaGCCCACGGTACCTACCACTCGGTTTGGCAGGATGTTCACAGCC | + |
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Preference number: 5 (lower is better) Translates to: PQWDRASASTGSPAC*PTVPTTRFGRMFTA Trigger: GGCTGTGAACATCCTGCCAAACCGAGTGGTAGGTACCGTGGGCCAGCATGCCGGGGAGCCTGTGGAGGCGCTAGCCCTATCCCATTGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS GCA 90 bp | TGGCCGCAATGGGATAGGGCTAGCGCCTCCACAGGCTCCCCGGCATaGTGGCCCACGGTACCTACCACTCGGTTTGGCAGGATGTTCACA | + |
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Preference number: 5 (lower is better) Translates to: WPQWDRASASTGSPA*WPTVPTTRFGRMFT Trigger: TGTGAACATCCTGCCAAACCGAGTGGTAGGTACCGTGGGCCAGCATGCCGGGGAGCCTGTGGAGGCGCTAGCCCTATCCCATTGCGGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CCA 90 bp | TGCTGCCAGCAGATCTCGAGTCGGATGGAACGCCAGGCCACTGGCTaGGGCTTCCAGCACGATGTCTTCTGGGGTATCACGGATCCGGGG | + |
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Preference number: 5 (lower is better) Translates to: CCQQISSRMERQATG*GFQHDVFWGITDPG Trigger: CCCCGGATCCGTGATACCCCAGAAGACATCGTGCTGGAAGCCCCAGCCAGTGGCCTGGCGTTCCATCCGACTCGAGATCTGCTGGCAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CCA 90 bp | TCCCAAAACTTGAGGCGCTGGTCGTGGCCACTACTGGCCAGAAAGTaGCCGCAATGGGATAGGGCTAGCGCCTCCACAGGCTCCCCGGCA | + |
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Preference number: 5 (lower is better) Translates to: SQNLRRWSWPLLARK*PQWDRASASTGSPA Trigger: TGCCGGGGAGCCTGTGGAGGCGCTAGCCCTATCCCATTGCGGCCACTTTCTGGCCAGTAGTGGCCACGACCAGCGCCTCAAGTTTTGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CCA 90 bp | ATGGAACGCCAGGCCACTGGCTGGGGCTTCCAGCACGATGTCTTCTaGGGTATCACGGATCCGGGGTGCTGCCTTCGTGGAGTCAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: MERQATGWGFQHDVF*GITDPGCCLRGVKV Trigger: GACCTTGACTCCACGAAGGCAGCACCCCGGATCCGTGATACCCCAGAAGACATCGTGCTGGAAGCCCCAGCCAGTGGCCTGGCGTTCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CCA 90 bp | ACATCTCCGTCCACGTCCCCTGCTGCCAGCAGATCTCGAGTCGGATaGAACGCCAGGCCACTGGCTGGGGCTTCCAGCACGATGTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: TSPSTSPAASRSRVG*NARPLAGASSTMSS Trigger: AGAAGACATCGTGCTGGAAGCCCCAGCCAGTGGCCTGGCGTTCCATCCGACTCGAGATCTGCTGGCAGCAGGGGACGTGGACGGAGATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS GCA 90 bp | ACAAGAGTAGGCAAAGACGAACACATCTCCGTCCACGTCCCCTGCTaGCAGCAGATCTCGAGTCGGATGGAACGCCAGGCCACTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TRVGKDEHISVHVPC*QQISSRMERQATGW Trigger: CCAGCCAGTGGCCTGGCGTTCCATCCGACTCGAGATCTGCTGGCAGCAGGGGACGTGGACGGAGATGTGTTCGTCTTTGCCTACTCTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS GCA 90 bp | CTGACAAGAGTAGGCAAAGACGAACACATCTCCGTCCACGTCCCCTaGTGCCAGCAGATCTCGAGTCGGATGGAACGCCAGGCCACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LTRVGKDEHISVHVP*CQQISSRMERQATG Trigger: GCCAGTGGCCTGGCGTTCCATCCGACTCGAGATCTGCTGGCAGCAGGGGACGTGGACGGAGATGTGTTCGTCTTTGCCTACTCTTGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS GCA 90 bp | CTTCCCTCAACCCTGCAAAGAAGTCGTCCGTGCTCCAAGCCTTACTaGTCAGGGCACGAAGCGGCCCTCCCTTTTTCTTGCGTCGCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: LPSTLQRSRPCSKPY*SGHEAALPFSCVAD Trigger: ATCGGCGACGCAAGAAAAAGGGAGGGCCGCTTCGTGCCCTGAGCAGTAAGGCTTGGAGCACGGACGACTTCTTTGCAGGGTTGAGGGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CCA 90 bp | TACTCCTCATGCTGCCGCATATCCATCAAAGGGCCCTCTTTACGCTaGTCCCATAGCCGGATGCCACCAGTGTCGTCCCCCGTAACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: YSSCCRISIKGPSLR*SHSRMPPVSSPVTR Trigger: TCTGGTTACGGGGGACGACACTGGTGGCATCCGGCTATGGGACCAGCGTAAAGAGGGCCCTTTGATGGATATGCGGCAGCATGAGGAGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CCA 90 bp | CGTCGTCATCGTCATCGCTCTCCCTCACCACCTCCTCTGGAGCCTTaGCATCCTCTTCATCTTCCCTCAACCCTGCAAAGAAGTCGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: RRHRHRSPSPPPLEP*HPLHLPSTLQRSRP Trigger: CGGACGACTTCTTTGCAGGGTTGAGGGAAGATGAAGAGGATGCCAAGGCTCCAGAGGAGGTGGTGAGGGAGAGCGATGACGATGACGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS GCA 90 bp | TCCAAGCCTTACTGCTCAGGGCACGAAGCGGCCCTCCCTTTTTCTTaGGTCGCCGATAGTCATCCACAACCACGGTTCGAAGCTGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SKPYCSGHEAALPFS*VADSHPQPRFEAES Trigger: TGACTCAGCTTCGAACCGTGGTTGTGGATGACTATCGGCGACGCAAGAAAAAGGGAGGGCCGCTTCGTGCCCTGAGCAGTAAGGCTTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS TCA 90 bp | CAAGTTTCTGCCCATCCTCTGAGAAGACAACAGCCCGGCAGGACTTaGGGTGGTGTCCTGAGGACCAGAGTTCCTTGGTTTCTCCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QVSAHPLRRQQPGRT*GGVLRTRVPWFLPP Trigger: AGGAGGGAGAAACCAAGGAACTCTGGTCCTCAGGACACCACCTCAAGTCCTGCCGGGCTGTTGTCTTCTCAGAGGATGGGCAGAAACTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS TCA 90 bp | AGTCATCCACAACCACGGTTCGAAGCTGAGTCATGTCCCAAAACTTaGGGCGCTGGTCGTGGCCACTACTGGCCAGAAAGTGGCCGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SHPQPRFEAESCPKT*GAGRGHYWPESGRN Trigger: ATTGCGGCCACTTTCTGGCCAGTAGTGGCCACGACCAGCGCCTCAAGTTTTGGGACATGACTCAGCTTCGAACCGTGGTTGTGGATGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CCA 90 bp | GCACGATGTCTTCTGGGGTATCACGGATCCGGGGTGCTGCCTTCGTaGAGTCAAGGTCTTCCTCTTCATTGTTTGAGTCCTCTGCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ARCLLGYHGSGVLPS*SQGLPLHCLSPLQD Trigger: GTCCTGCAGAGGACTCAAACAATGAAGAGGAAGACCTTGACTCCACGAAGGCAGCACCCCGGATCCGTGATACCCCAGAAGACATCGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
||
| CDS-3UTR CAA 90 bp | AGGATGTTCACAGCCCTGATGATTCCATCCGTGGAGCCAGTGCACAACAGATTCCGGCGTCTCTTGATGTaGAAGACACCAAGGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RMFTALMIPSVEPVHNRFRRLLM*KTPRQP Trigger: TGGCTGCCTTGGTGTCTTCAACATCAAGAGACGCCG...GAATCTGTTGTGCACTGGCTCCACGGATGGAATCATCAGGGCTGTGAACATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235748.2 |
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| CDS TCA 90 bp | ACCAGCTGTACTTTCATGAGGGCGACGGAGGTTAGATCTCCTGACTaGGGCTCTGAGAGTAACTCAAACCGGCGTCTCTTGATGTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TSCTFMRATEVRSPD*GSESNSNRRLLMLK Trigger: CTTCAACATCAAGAGACGCCGGTTTGAGTTACTCTCAGAGCCTCAGTCAGGAGATCTAACCTCCGTCGCCCTCATGAAAGTACAGCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235748.2 |
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| CDS CCA 90 bp | AGAGCATTCTCATCCACAAGCAGCACACTGTTAATGGGGGCACTGTaGGCCTTGGAAATTCGCCTTTCCAATTGTCCCTGTTCGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: RAFSSTSSTLLMGAL*ALEIRLSNCPCSTS Trigger: AGATGTCGAACAGGGACAATTGGAAAGGCGAATTTCCAAGGCCCACAGTGCCCCCATTAACAGTGTGCTGCTTGTGGATGAGAATGCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
||
| CDS-3UTR CAA 90 bp | GGTAGAGCTGAGCTGATCATGTTCAAGGTGGTAGGTTCAATCTACAGCATCAACTACCTACCACTCGGTTaGGCAGGATGTTCACAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GRAELIMFKVVGSIYSINYLPLG*AGCSQP Trigger: GGGCTGTGAACATCCTGCCAAACCGAGTGGTAGGTA...GTTGATGCTGTAGATTGAACCTACCACCTTGAACATGATCAGCTCAGCTCTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR CAA 90 bp | GTGTCTTGCTGTAGTGGTCATAGAGTTTGTTTTACAATGATAGGGGGAGCAAATGTCATGTCCCAAAACTaGAGGCGCTGGTCGTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VSCCSGHRVCFTMIGGANVMSQN*RRWSWP Trigger: TGGCCACGACCAGCGCCTCAAGTTTTGGGACATGAC...ATTTGCTCCCCCTATCATTGTAAAACAAACTCTATGACCACTACAGCAAGACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
||
| CDS-3UTR CAA 90 bp | ATGTGTCTGCTTGGTATACATGTGTCTTGCTGTAGTGGTCATAGAGTTTGTTTTCGGCGTCTCTTGATGTaGAAGACACCAAGGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: MCLLGIHVSCCSGHRVCFRRLLM*KTPRQP Trigger: TGGCTGCCTTGGTGTCTTCAACATCAAGAGACGCCG...AAAACAAACTCTATGACCACTACAGCAAGACACATGTATACCAAGCAGACACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR CAA 90 bp | TGTCTGCTTGGTATACATGTGTCTTGCTGTAGTGGTCATAGAGTTTGTTTTACAACCTCCTCTGGAGCCTaGGCATCCTCTTCATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CLLGIHVSCCSGHRVCFTTSSGA*ASSSSS Trigger: GGAAGATGAAGAGGATGCCAAGGCTCCAGAGGAGGT...TGTAAAACAAACTCTATGACCACTACAGCAAGACACATGTATACCAAGCAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
||
| CDS CCA 90 bp | TTGGAAATTCGCCTTTCCAATTGTCCCTGTTCGACATCTAAGATGTaGATTGCTTTGTCCTTAGAGACGGTAACAAGTTTCTGCCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LEIRLSNCPCSTSKM*IALSLETVTSFCPS Trigger: GGATGGGCAGAAACTTGTTACCGTCTCTAAGGACAAAGCAATCCACATCTTAGATGTCGAACAGGGACAATTGGAAAGGCGAATTTCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS-3UTR CAA 90 bp | TCAATCTACAGCATCAACAGAGTTCTTTGGGGAAATCTGTCCCAGAAAACAGCTCTTCCTCTTCATTGTTaGAGTCCTCTGCAGGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: SIYSINRVLWGNLSQKTALPLHC*SPLQDS Trigger: AGAGTCCTGCAGAGGACTCAAACAATGAAGAGGAAG...AGCTGTTTTCTGGGACAGATTTCCCCAAAGAACTCTGTTGATGCTGTAGATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
||
| CDS-3UTR CAA 90 bp | ATCATGTTCAAGGTGGTAGGTTCAATCTACAGCATCAACAGAGTTCTTTGGGGAAGGTCTTCCTCTTCATaGTTTGAGTCCTCTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: IMFKVVGSIYSINRVLWGRSSSS*FESSAG Trigger: TCCTGCAGAGGACTCAAACAATGAAGAGGAAGACCT...TCCCCAAAGAACTCTGTTGATGCTGTAGATTGAACCTACCACCTTGAACATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS GCA 72 bp | TGGGATAGGGCTAGCGCCTCCACAGGCTCCCCGGCATaGTGGCCCACGGTACCTACCACTCGGTTTGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: WDRASASTGSPA*WPTVPTTRFGR Trigger: CCTGCCAAACCGAGTGGTAGGTACCGTGGGCCAGCATGCCGGGGAGCCTGTGGAGGCGCTAGCCCTATCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CCA 72 bp | TCCACGTCCCCTGCTGCCAGCAGATCTCGAGTCGGATaGAACGCCAGGCCACTGGCTGGGGCTTCCAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: STSPAASRSRVG*NARPLAGASST Trigger: CGTGCTGGAAGCCCCAGCCAGTGGCCTGGCGTTCCATCCGACTCGAGATCTGCTGGCAGCAGGGGACGTGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CCA 72 bp | GATAGGGCTAGCGCCTCCACAGGCTCCCCGGCATGCTaGCCCACGGTACCTACCACTCGGTTTGGCAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: DRASASTGSPAC*PTVPTTRFGRM Trigger: CATCCTGCCAAACCGAGTGGTAGGTACCGTGGGCCAGCATGCCGGGGAGCCTGTGGAGGCGCTAGCCCTATC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CCA 72 bp | TGGTCGTGGCCACTACTGGCCAGAAAGTGGCCGCAATaGGATAGGGCTAGCGCCTCCACAGGCTCCCCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: WSWPLLARKWPQ*DRASASTGSPA Trigger: TGCCGGGGAGCCTGTGGAGGCGCTAGCCCTATCCCATTGCGGCCACTTTCTGGCCAGTAGTGGCCACGACCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CCA 72 bp | CAGGCCACTGGCTGGGGCTTCCAGCACGATGTCTTCTaGGGTATCACGGATCCGGGGTGCTGCCTTCGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: QATGWGFQHDVF*GITDPGCCLRG Trigger: TCCACGAAGGCAGCACCCCGGATCCGTGATACCCCAGAAGACATCGTGCTGGAAGCCCCAGCCAGTGGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CCA 72 bp | TTGAGGCGCTGGTCGTGGCCACTACTGGCCAGAAAGTaGCCGCAATGGGATAGGGCTAGCGCCTCCACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LRRWSWPLLARK*PQWDRASASTG Trigger: GCCTGTGGAGGCGCTAGCCCTATCCCATTGCGGCCACTTTCTGGCCAGTAGTGGCCACGACCAGCGCCTCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CCA 72 bp | CAGATCTCGAGTCGGATGGAACGCCAGGCCACTGGCTaGGGCTTCCAGCACGATGTCTTCTGGGGTATCACG | + |
|
Preference number: 6 (lower is better) Translates to: QISSRMERQATG*GFQHDVFWGIT Trigger: CGTGATACCCCAGAAGACATCGTGCTGGAAGCCCCAGCCAGTGGCCTGGCGTTCCATCCGACTCGAGATCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CCA 72 bp | CCAGCAGATCTCGAGTCGGATGGAACGCCAGGCCACTaGCTGGGGCTTCCAGCACGATGTCTTCTGGGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: PADLESDGTPGH*LGLPARCLLGY Trigger: ATACCCCAGAAGACATCGTGCTGGAAGCCCCAGCCAGTGGCCTGGCGTTCCATCCGACTCGAGATCTGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CCA 72 bp | CCCGGCATGCTGGCCCACGGTACCTACCACTCGGTTTaGCAGGATGTTCACAGCCCTGATGATTCCATCCGT | + |
|
Preference number: 6 (lower is better) Translates to: PGMLAHGTYHSV*QDVHSPDDSIR Trigger: ACGGATGGAATCATCAGGGCTGTGAACATCCTGCCAAACCGAGTGGTAGGTACCGTGGGCCAGCATGCCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS GCA 72 bp | ACCCTGCAAAGAAGTCGTCCGTGCTCCAAGCCTTACTaGTCAGGGCACGAAGCGGCCCTCCCTTTTTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: TLQRSRPCSKPY*SGHEAALPFSC Trigger: GCAAGAAAAAGGGAGGGCCGCTTCGTGCCCTGAGCAGTAAGGCTTGGAGCACGGACGACTTCTTTGCAGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS GCA 72 bp | CTTCATCTTCCCTCAACCCTGCAAAGAAGTCGTCCGTaGTCCAAGCCTTACTGCTCAGGGCACGAAGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LHLPSTLQRSRP*SKPYCSGHEAA Trigger: GGCCGCTTCGTGCCCTGAGCAGTAAGGCTTGGAGCACGGACGACTTCTTTGCAGGGTTGAGGGAAGATGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CAA 90 bp | TCGTCGTCATCGTCATCGCTCTCCCTCACCACCTCCTCTGGAGCCTaGGCATCCTCTTCATCTTCCCTCAACCCTGCAAAGAAGTCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSSLSLTTSSGA*ASSSSSLNPAKKSS Trigger: GGACGACTTCTTTGCAGGGTTGAGGGAAGATGAAGAGGATGCCAAGGCTCCAGAGGAGGTGGTGAGGGAGAGCGATGACGATGACGACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS TCA 72 bp | GAAGACAACAGCCCGGCAGGACTTGAGGTGGTGTCCTaGGGACCAGAGTTCCTTGGTTTCTCCCTCCTGACA | + |
|
Preference number: 6 (lower is better) Translates to: EDNSPAGLEVVS*GPEFLGFSLLT Trigger: TGTCAGGAGGGAGAAACCAAGGAACTCTGGTCCTCAGGACACCACCTCAAGTCCTGCCGGGCTGTTGTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS TCA 72 bp | GCCCATCCTCTGAGAAGACAACAGCCCGGCAGGACTTaGGGTGGTGTCCTGAGGACCAGAGTTCCTTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: AHPLRRQQPGRT*GGVLRTRVPWF Trigger: AAACCAAGGAACTCTGGTCCTCAGGACACCACCTCAAGTCCTGCCGGGCTGTTGTCTTCTCAGAGGATGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS GCA 72 bp | TACTGCTCAGGGCACGAAGCGGCCCTCCCTTTTTCTTaGGTCGCCGATAGTCATCCACAACCACGGTTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: YCSGHEAALPFS*VADSHPQPRFE Trigger: TTCGAACCGTGGTTGTGGATGACTATCGGCGACGCAAGAAAAAGGGAGGGCCGCTTCGTGCCCTGAGCAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CCA 72 bp | TCCTCTGAGAAGACAACAGCCCGGCAGGACTTGAGGTaGTGTCCTGAGGACCAGAGTTCCTTGGTTTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: SSEKTTARQDLR*CPEDQSSLVSP Trigger: GGGAGAAACCAAGGAACTCTGGTCCTCAGGACACCACCTCAAGTCCTGCCGGGCTGTTGTCTTCTCAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CAA 90 bp | ACAAGTTTCTGCCCATCCTCTGAGAAGACAACAGCCCGGCAGGACTaGAGGTGGTGTCCTGAGGACCAGAGTTCCTTGGTTTCTCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TSFCPSSEKTTARQD*RWCPEDQSSLVSPS Trigger: GGAGGGAGAAACCAAGGAACTCTGGTCCTCAGGACACCACCTCAAGTCCTGCCGGGCTGTTGTCTTCTCAGAGGATGGGCAGAAACTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS TCA 72 bp | CAACCACGGTTCGAAGCTGAGTCATGTCCCAAAACTTaGGGCGCTGGTCGTGGCCACTACTGGCCAGAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: QPRFEAESCPKT*GAGRGHYWPES Trigger: ACTTTCTGGCCAGTAGTGGCCACGACCAGCGCCTCAAGTTTTGGGACATGACTCAGCTTCGAACCGTGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS TCA 72 bp | ACAGGCCACCTTCTTCCCGTACCAGCTGTACTTTCATaGGGGCGACGGAGGTTAGATCTCCTGACTGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TGHLLPVPAVLS*GRRRLDLLTEA Trigger: AGCCTCAGTCAGGAGATCTAACCTCCGTCGCCCTCATGAAAGTACAGCTGGTACGGGAAGAAGGTGGCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235748.2 |
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| CDS GCA 72 bp | CAGCACGATGTCTTCTGGGGTATCACGGATCCGGGGTaGTGCCTTCGTGGAGTCAAGGTCTTCCTCTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: QHDVFWGITDPG*CLRGVKVFLFI Trigger: AATGAAGAGGAAGACCTTGACTCCACGAAGGCAGCACCCCGGATCCGTGATACCCCAGAAGACATCGTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
||
| CDS CAA 72 bp | GGCTCTGAGAGTAACTCAAACCGGCGTCTCTTGATGTaGAAGACACCAAGGCAGCCATCCCCACTGGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: GSESNSNRRLLM*KTPRQPSPLAV Trigger: GACAGCCAGTGGGGATGGCTGCCTTGGTGTCTTCAACATCAAGAGACGCCGGTTTGAGTTACTCTCAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS GCA 72 bp | CACGATGTCTTCTGGGGTATCACGGATCCGGGGTGCTaGCTTCGTGGAGTCAAGGTCTTCCTCTTCATTGTT | + |
|
Preference number: 6 (lower is better) Translates to: HDVFWGITDPGC*LRGVKVFLFIV Trigger: AACAATGAAGAGGAAGACCTTGACTCCACGAAGGCAGCACCCCGGATCCGTGATACCCCAGAAGACATCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS GCA 72 bp | TGGAGCCTTGGCATCCTCTTCATCTTCCCTCAACCCTaGAAAGAAGTCGTCCGTGCTCCAAGCCTTACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: WSLGILFIFPQP*KEVVRAPSLTA Trigger: AGCAGTAAGGCTTGGAGCACGGACGACTTCTTTGCAGGGTTGAGGGAAGATGAAGAGGATGCCAAGGCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CCA 72 bp | CTTCTGGGGTATCACGGATCCGGGGTGCTGCCTTCGTaGAGTCAAGGTCTTCCTCTTCATTGTTTGAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LLGYHGSGVLPS*SQGLPLHCLSP Trigger: AGGACTCAAACAATGAAGAGGAAGACCTTGACTCCACGAAGGCAGCACCCCGGATCCGTGATACCCCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
||
| CDS TCA 72 bp | TGCCTTCGTGGAGTCAAGGTCTTCCTCTTCATTGTTTaGGTCCTCTGCAGGACTCTCTTCACACGTGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: CLRGVKVFLFIV*VLCRTLFTRGV Trigger: GACCCCACGTGTGAAGAGAGTCCTGCAGAGGACTCAAACAATGAAGAGGAAGACCTTGACTCCACGAAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
||
| CDS TCA 72 bp | ACTTTCATGAGGGCGACGGAGGTTAGATCTCCTGACTaGGGCTCTGAGAGTAACTCAAACCGGCGTCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TFMRATEVRSPD*GSESNSNRRLL Trigger: CAAGAGACGCCGGTTTGAGTTACTCTCAGAGCCTCAGTCAGGAGATCTAACCTCCGTCGCCCTCATGAAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235748.2 |
||
| CDS CAA 72 bp | CTGCCTTCGTGGAGTCAAGGTCTTCCTCTTCATTGTTaGAGTCCTCTGCAGGACTCTCTTCACACGTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LPSWSQGLPLHC*SPLQDSLHTWG Trigger: ACCCCACGTGTGAAGAGAGTCCTGCAGAGGACTCAAACAATGAAGAGGAAGACCTTGACTCCACGAAGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS GCA 72 bp | TGGATTGCTTTGTCCTTAGAGACGGTAACAAGTTTCTaGCCATCCTCTGAGAAGACAACAGCCCGGCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: WIALSLETVTSF*PSSEKTTARQD Trigger: GTCCTGCCGGGCTGTTGTCTTCTCAGAGGATGGGCAGAAACTTGTTACCGTCTCTAAGGACAAAGCAATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
||
| CDS CCA 72 bp | TCATCCACAAGCAGCACACTGTTAATGGGGGCACTGTaGGCCTTGGAAATTCGCCTTTCCAATTGTCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSTSSTLLMGAL*ALEIRLSNCPC Trigger: ACAGGGACAATTGGAAAGGCGAATTTCCAAGGCCCACAGTGCCCCCATTAACAGTGTGCTGCTTGTGGATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
||
| CDS CAA 72 bp | ACAAGCAGCACACTGTTAATGGGGGCACTGTGGGCCTaGGAAATTCGCCTTTCCAATTGTCCCTGTTCGACA | + |
|
Preference number: 6 (lower is better) Translates to: TSSTLLMGALWA*EIRLSNCPCST Trigger: TGTCGAACAGGGACAATTGGAAAGGCGAATTTCCAAGGCCCACAGTGCCCCCATTAACAGTGTGCTGCTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
||
| CDS CAA 90 bp | TTCTCATCCACAAGCAGCACACTGTTAATGGGGGCACTGTGGGCCTaGGAAATTCGCCTTTCCAATTGTCCCTGTTCGACATCTAAGATG | + |
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Preference number: 6 (lower is better) Translates to: FSSTSSTLLMGALWA*EIRLSNCPCSTSKM Trigger: CATCTTAGATGTCGAACAGGGACAATTGGAAAGGCGAATTTCCAAGGCCCACAGTGCCCCCATTAACAGTGTGCTGCTTGTGGATGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CAA 90 bp | CGCCTTTCCAATTGTCCCTGTTCGACATCTAAGATGTGGATTGCTTaGTCCTTAGAGACGGTAACAAGTTTCTGCCCATCCTCTGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: RLSNCPCSTSKMWIA*SLETVTSFCPSSEK Trigger: CTTCTCAGAGGATGGGCAGAAACTTGTTACCGTCTCTAAGGACAAAGCAATCCACATCTTAGATGTCGAACAGGGACAATTGGAAAGGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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| CDS CAA 72 bp | AATTGTCCCTGTTCGACATCTAAGATGTGGATTGCTTaGTCCTTAGAGACGGTAACAAGTTTCTGCCCATCC | + |
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Preference number: 6 (lower is better) Translates to: NCPCSTSKMWIA*SLETVTSFCPS Trigger: GGATGGGCAGAAACTTGTTACCGTCTCTAAGGACAAAGCAATCCACATCTTAGATGTCGAACAGGGACAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049323.9 |
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