Pregenerated sensors for WDR54 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030032Ensembl transcript IDs: ENSMUST00000032108.12, ENSMUST00000125894.9, ENSMUST00000153148.8
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGAGGGACAAAGTGGGATGGGAAGACAGCAGGGTGAGTATTGGGTaGATGGGGTCAGTGGGGGACTGGGAGGAAGGTGCCCGGTTGGGG | + |
|
Preference number: 1 (lower is better) Translates to: GRDKVGWEDSRVSIG*MGSVGDWEEGARLG Trigger: CCCCAACCGGGCACCTTCCTCCCAGTCCCCCACTGACCCCATGCACCCAATACTCACCCTGCTGTCTTCCCATCCCACTTTGTCCCTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR CCA 90 bp | ATCCTGGCCCAGCGGGAGGGCACAAGGCTGGAGCCATCCCCACCCTaGCTAGCAATGTTTACAGACCAGCCTGCCTTGCCTAGCTCCTGC | + |
|
Preference number: 1 (lower is better) Translates to: ILAQREGTRLEPSPP*LAMFTDQPALPSSC Trigger: GCAGGAGCTAGGCAAGGCAGGCTGGTCTGTAAACATTGCTAGCCAGGGTGGGGATGGCTCCAGCCTTGTGCCCTCCCGCTGGGCCAGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR CCA 90 bp | ATCAACAAGGTGACTAGTCCCTCCGGGGTGAGGCCACCTGGTGCCTaGGCTCAGGCACCTCTCTCTCAAGACTCCGGAGGGTTGGGCCCA | + |
|
Preference number: 1 (lower is better) Translates to: INKVTSPSGVRPPGA*AQAPLSQDSGGLGP Trigger: TGGGCCCAACCCTCCGGAGTCTTGAGAGAGAGGTGCCTGAGCCCAGGCACCAGGTGGCCTCACCCCGGAGGGACTAGTCACCTTGTTGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR TCA 90 bp | CAGCGTCAGCCCTGCAGCGCCTTCCTGCCACACATGCCACTCCACTaGTGTCCCTTCTCCCTCCAGAGGTCCTCGATTCCACCTCTTGGC | + |
|
Preference number: 1 (lower is better) Translates to: QRQPCSAFLPHMPLH*CPFSLQRSSIPPLG Trigger: GCCAAGAGGTGGAATCGAGGACCTCTGGAGGGAGAAGGGACATCAGTGGAGTGGCATGTGTGGCAGGAAGGCGCTGCAGGGCTGACGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR GCA 90 bp | TGTGCTGGCATCATACAGGCGCACTTGCCCATTTCCATACCCTGCTaGCACGATCCCCTGCCACAGCTGCACAGAGGGGCATGGGACCCC | + |
|
Preference number: 1 (lower is better) Translates to: CAGIIQAHLPISIPC*HDPLPQLHRGAWDP Trigger: GGGGTCCCATGCCCCTCTGTGCAGCTGTGGCAGGGGATCGTGGCAGCAGGGTATGGAAATGGGCAAGTGCGCCTGTATGATGCCAGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR GCA 90 bp | CCCTGTGCTGGCATCATACAGGCGCACTTGCCCATTTCCATACCCTaGTGCCACGATCCCCTGCCACAGCTGCACAGAGGGGCATGGGAC | + |
|
Preference number: 1 (lower is better) Translates to: PCAGIIQAHLPISIP*CHDPLPQLHRGAWD Trigger: GTCCCATGCCCCTCTGTGCAGCTGTGGCAGGGGATCGTGGCAGCAGGGTATGGAAATGGGCAAGTGCGCCTGTATGATGCCAGCACAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR GCA 90 bp | ATCTGGACGTGGAGGGCCCCTGTGCTGGCATCATACAGGCGCACTTaGCCATTTCCATACCCTGCTGCCACGATCCCCTGCCACAGCTGC | + |
|
Preference number: 1 (lower is better) Translates to: IWTWRAPVLASYRRT*PFPYPAATIPCHSC Trigger: GCAGCTGTGGCAGGGGATCGTGGCAGCAGGGTATGGAAATGGGCAAGTGCGCCTGTATGATGCCAGCACAGGGGCCCTCCACGTCCAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR GCA 90 bp | CCCTGGCTAGCAATGTTTACAGACCAGCCTGCCTTGCCTAGCTCCTaGTCGCCTGCCTCAGTGGCCCCAGTCCCAACCTGGATGCAACCC | + |
|
Preference number: 1 (lower is better) Translates to: PWLAMFTDQPALPSS*SPASVAPVPTWMQP Trigger: GGGTTGCATCCAGGTTGGGACTGGGGCCACTGAGGCAGGCGAGCAGGAGCTAGGCAAGGCAGGCTGGTCTGTAAACATTGCTAGCCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR GCA 90 bp | CCCCTTTATGGCAGCGTGTGTTGCCGCCTGGCAGCTCAGCCTCTCTaGATGATCCAGCCCACTGCAAGTGGTGCCCTTAGGGTGCAGGTG | + |
|
Preference number: 1 (lower is better) Translates to: PLYGSVCCRLAAQPL*MIQPTASGALRVQV Trigger: CACCTGCACCCTAAGGGCACCACTTGCAGTGGGCTGGATCATGCAGAGAGGCTGAGCTGCCAGGCGGCAACACACGCTGCCATAAAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR GCA 90 bp | TTCCCATCCTCACCTGGTACTTCCTCCTCCCCCAGAGGAGAACCCTaGCTGGCTACCCCTTTATGGCAGCGTGTGTTGCCGCCTGGCAGC | + |
|
Preference number: 1 (lower is better) Translates to: FPSSPGTSSSPRGEP*LATPLWQRVLPPGS Trigger: GCTGCCAGGCGGCAACACACGCTGCCATAAAGGGGTAGCCAGGCAGGGTTCTCCTCTGGGGGAGGAGGAAGTACCAGGTGAGGATGGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR CCA 90 bp | CATCCTCACCTGGTACTTCCTCCTCCCCCAGAGGAGAACCCTGCCTaGCTACCCCTTTATGGCAGCGTGTGTTGCCGCCTGGCAGCTCAG | + |
|
Preference number: 1 (lower is better) Translates to: HPHLVLPPPPEENPA*LPLYGSVCCRLAAQ Trigger: CTGAGCTGCCAGGCGGCAACACACGCTGCCATAAAGGGGTAGCCAGGCAGGGTTCTCCTCTGGGGGAGGAGGAAGTACCAGGTGAGGATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR GCA 90 bp | GAACTCAGGTCCCGACCTCCAGACACACAGGACACCCGAGTCATCTaGTGTCACCATGTCAGCAACACCATCCTGCCCCTGGGCACGCTC | + |
|
Preference number: 1 (lower is better) Translates to: ELRSRPPDTQDTRVI*CHHVSNTILPLGTL Trigger: GAGCGTGCCCAGGGGCAGGATGGTGTTGCTGACATGGTGACAGCAGATGACTCGGGTGTCCTGTGTGTCTGGAGGTCGGGACCTGAGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR GCA 90 bp | GTGGAACAACCCAGCGTCAGCCCTGCAGCGCCTTCCTGCCACACATaGCACTCCACTGATGTCCCTTCTCCCTCCAGAGGTCCTCGATTC | + |
|
Preference number: 1 (lower is better) Translates to: VEQPSVSPAAPSCHT*HSTDVPSPSRGPRF Trigger: GAATCGAGGACCTCTGGAGGGAGAAGGGACATCAGTGGAGTGGCATGTGTGGCAGGAAGGCGCTGCAGGGCTGACGCTGGGTTGTTCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR GCA 90 bp | TTCTTGGCAGTGGAACAACCCAGCGTCAGCCCTGCAGCGCCTTCCTaGCACACATGCCACTCCACTGATGTCCCTTCTCCCTCCAGAGGT | + |
|
Preference number: 1 (lower is better) Translates to: FLAVEQPSVSPAAPS*HTCHSTDVPSPSRG Trigger: ACCTCTGGAGGGAGAAGGGACATCAGTGGAGTGGCATGTGTGGCAGGAAGGCGCTGCAGGGCTGACGCTGGGTTGTTCCACTGCCAAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR TCA 90 bp | CAGAGGGGCATGGGACCCCGAATCCTGGTATTCGGGTCAGTAAGGTaGACTCAGGTCCCGACCTCCAGACACACAGGACACCCGAGTCAT | + |
|
Preference number: 1 (lower is better) Translates to: QRGMGPRILVFGSVR*TQVPTSRHTGHPSH Trigger: ATGACTCGGGTGTCCTGTGTGTCTGGAGGTCGGGACCTGAGTTCACCTTACTGACCCGAATACCAGGATTCGGGGTCCCATGCCCCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR CCA 90 bp | GGCCAGCCTGGGCTCCTCTTCCTCCACTGGACTAGGACGGAAGGCTaGGGAGGGGTAATGGAAACCCCTCTTAAGTTGTGGCTATCATGG | + |
|
Preference number: 1 (lower is better) Translates to: GQPGLLFLHWTRTEG*GGVMETPLKLWLSW Trigger: CCATGATAGCCACAACTTAAGAGGGGTTTCCATTACCCCTCCCCAGCCTTCCGTCCTAGTCCAGTGGAGGAAGAGGAGCCCAGGCTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR CCA 90 bp | CTGGTGCCTGGGCTCAGGCACCTCTCTCTCAAGACTCCGGAGGGTTaGGCCCAGGCTTCAGAGACAAGAGAAAGGCAGACTCTGTTCCTA | + |
|
Preference number: 1 (lower is better) Translates to: LVPGLRHLSLKTPEG*AQASETRERQTLFL Trigger: TAGGAACAGAGTCTGCCTTTCTCTTGTCTCTGAAGCCTGGGCCCAACCCTCCGGAGTCTTGAGAGAGAGGTGCCTGAGCCCAGGCACCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR TCA 90 bp | GATCTAGACATGGGAGGGACAAAGTGGGATGGGAAGACAGCAGGGTaGGTATTGGGTGCATGGGGTCAGTGGGGGACTGGGAGGAAGGTG | + |
|
Preference number: 1 (lower is better) Translates to: DLDMGGTKWDGKTAG*VLGAWGQWGTGRKV Trigger: CACCTTCCTCCCAGTCCCCCACTGACCCCATGCACCCAATACTCACCCTGCTGTCTTCCCATCCCACTTTGTCCCTCCCATGTCTAGATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR GCA 90 bp | TGCCCCTGGGCACGCTCAGTGGCAATATCTGTGATTGGTGTCTGGTaGCCAGCCAGTTCCTCGCTGAGTACAATGTTGGGACCCTTAGCG | + |
|
Preference number: 1 (lower is better) Translates to: CPWARSVAISVIGVW*PASSSLSTMLGPLA Trigger: CGCTAAGGGTCCCAACATTGTACTCAGCGAGGAACTGGCTGGGCACCAGACACCAATCACAGATATTGCCACTGAGCGTGCCCAGGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR GCA 90 bp | CAGTCTTATCAGAACCTGTGGCCTCCGGAGGTCCCTGTGAGGGGCTaGTCCTGCAGAATAATGCCATCTCAGCAGAGATTCGGGCCTTGC | + |
|
Preference number: 1 (lower is better) Translates to: QSYQNLWPPEVPVRG*SCRIMPSQQRFGPC Trigger: GCAAGGCCCGAATCTCTGCTGAGATGGCATTATTCTGCAGGAGCAGCCCCTCACAGGGACCTCCGGAGGCCACAGGTTCTGATAAGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR GCA 90 bp | AAGCGCTTCCTGGGAGAAAACTGGAACAACTCTGCCCTATCTGCCTaGACTAACCAGCCTCCAGGGCGGCAACGGAGAGTGGAGAGGAAA | + |
|
Preference number: 1 (lower is better) Translates to: KRFLGENWNNSALSA*TNQPPGRQRRVERK Trigger: TTTCCTCTCCACTCTCCGTTGCCGCCCTGGAGGCTGGTTAGTGCAGGCAGATAGGGCAGAGTTGTTCCAGTTTTCTCCCAGGAAGCGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR CCA 90 bp | TCCTGCCCCTGGGCACGCTCAGTGGCAATATCTGTGATTGGTGTCTaGTGCCCAGCCAGTTCCTCGCTGAGTACAATGTTGGGACCCTTA | + |
|
Preference number: 1 (lower is better) Translates to: SCPWARSVAISVIGV*CPASSSLSTMLGPL Trigger: TAAGGGTCCCAACATTGTACTCAGCGAGGAACTGGCTGGGCACCAGACACCAATCACAGATATTGCCACTGAGCGTGCCCAGGGGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR GCA 90 bp | TATCAGAACCTGTGGCCTCCGGAGGTCCCTGTGAGGGGCTGCTCCTaGAGAATAATGCCATCTCAGCAGAGATTCGGGCCTTGCTTTCTT | + |
|
Preference number: 1 (lower is better) Translates to: YQNLWPPEVPVRGCS*RIMPSQQRFGPCFL Trigger: AAGAAAGCAAGGCCCGAATCTCTGCTGAGATGGCATTATTCTGCAGGAGCAGCCCCTCACAGGGACCTCCGGAGGCCACAGGTTCTGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR CCA 90 bp | CCCATGGCTCCAGTCCCCAGTGTGAGAGGAACCAGCAACAGGATCTaGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCC | + |
|
Preference number: 1 (lower is better) Translates to: PMAPVPSVRGTSNRI*PRKKMTQGQLGSRS Trigger: GGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTGGTTCCTCTCACACTGGGGACTGGAGCCATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR TCA 90 bp | TCATACATCTGGAAGATGGGGGCAAGGATGAGAGCAAGATCCAGATaGCCCTTGTTGAGTTCTGGGCACTTCACCCAGCCAGGTAAGTCC | + |
|
Preference number: 1 (lower is better) Translates to: SYIWKMGARMRARSR*PLLSSGHFTQPGKS Trigger: GGACTTACCTGGCTGGGTGAAGTGCCCAGAACTCAACAAGGGTCATCTGGATCTTGCTCTCATCCTTGCCCCCATCTTCCAGATGTATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR TCA 90 bp | GTACTGAAGAAGCATCGCCTGAGTCCAAGGCGTGCCAATAAACCATaGCGGAGCCATCAGACTCATACATCTGGAAGATGGGGGCAAGGA | + |
|
Preference number: 1 (lower is better) Translates to: VLKKHRLSPRRANKP*RSHQTHTSGRWGQG Trigger: TCCTTGCCCCCATCTTCCAGATGTATGAGTCTGATGGCTCCGTCATGGTTTATTGGCACGCCTTGGACTCAGGCGATGCTTCTTCAGTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR CCA 90 bp | TCAAAGACCAGTACTCGACCGGAACACGTTCCCACACAGATGAAGTaGACGCTGGCAGCAATTCCTCGGGCAAACATAGCCTGTACTGAA | + |
|
Preference number: 1 (lower is better) Translates to: SKTSTRPEHVPTQMK*TLAAIPRANIACTE Trigger: TTCAGTACAGGCTATGTTTGCCCGAGGAATTGCTGCCAGCGTCCACTTCATCTGTGTGGGAACGTGTTCCGGTCGAGTACTGGTCTTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR TCA 90 bp | CACCACTCTTACCCTAGAAGAAGTGCAAGATGGATTCCGTACACATaGCCTCACGCTCACCAGTCATGGTATGTGTGTGTGTGTCTGTCC | + |
|
Preference number: 1 (lower is better) Translates to: HHSYPRRSARWIPYT*PHAHQSWYVCVCLS Trigger: GGACAGACACACACACACATACCATGACTGGTGAGCGTGAGGTCATGTGTACGGAATCCATCTTGCACTTCTTCTAGGGTAAGAGTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR GCA 90 bp | TTCTCCTCCAGTTCTCTCTGCTTCCAGTTTGTGCTGCTAGTAACTTaGTGTTTGTCTCTACAAAGGTATAAACGGGCTGCTCTCCTCCCC | + |
|
Preference number: 1 (lower is better) Translates to: FSSSSLCFQFVLLVT*CLSLQRYKRAALLP Trigger: GGGGAGGAGAGCAGCCCGTTTATACCTTTGTAGAGACAAACAGCAAGTTACTAGCAGCACAAACTGGAAGCAGAGAGAACTGGAGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR TCA 90 bp | ACATGGAGTCCTGAAAGGCACAAACCTCTTTTGTTACTGGAGATCTaGGGATGCAGACACTGGGCAAGAACCACTGTTCACTATCGTCAT | + |
|
Preference number: 1 (lower is better) Translates to: TWSPERHKPLLLLEI*GCRHWARTTVHYRH Trigger: ATGACGATAGTGAACAGTGGTTCTTGCCCAGTGTCTGCATCCTCAGATCTCCAGTAACAAAAGAGGTTTGTGCCTTTCAGGACTCCATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR CAA 90 bp | GATCTGGACGTGGAGGGCCCCTGTGCTGGCATCATACAGGCGCACTaGCCCATTTCCATACCCTGCTGCCACGATCCCCTGCCACAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: DLDVEGPCAGIIQAH*PISIPCCHDPLPQL Trigger: CAGCTGTGGCAGGGGATCGTGGCAGCAGGGTATGGAAATGGGCAAGTGCGCCTGTATGATGCCAGCACAGGGGCCCTCCACGTCCAGATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR-3UTR CCA 90 bp | ACGTCACAGTCTTATCAGAACCTGTGGCCTCCGGAGGTCCCTGTGAGGGGCTGCCTGTGGGGCACCAGTTaGCCAGCCTGGGCTCCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: TSQSYQNLWPPEVPVRGCLWGTS*PAWAPL Trigger: AAGAGGAGCCCAGGCTGGCCAACTGGTGCCCCACAG...GCAGCCCCTCACAGGGACCTCCGGAGGCCACAGGTTCTGATAAGACTGTGACGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR CAA 90 bp | CCTGGTGCCTGGGCTCAGGCACCTCTCTCTCAAGACTCCGGAGGGTaGGGCCCAGGCTTCAGAGACAAGAGAAAGGCAGACTCTGTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: PGAWAQAPLSQDSGG*GPGFRDKRKADSVP Trigger: AGGAACAGAGTCTGCCTTTCTCTTGTCTCTGAAGCCTGGGCCCAACCCTCCGGAGTCTTGAGAGAGAGGTGCCTGAGCCCAGGCACCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCGCACTTGCCCATTTCCATACCCTGCTGCCACGATCCCCTGCCACAGCTGCACAGCCAGTTCCTCGCTaGGTACAATGTTGGGACCCT | + |
|
Preference number: 2 (lower is better) Translates to: GALAHFHTLLPRSPATAAQPVPR*VQCWDP Trigger: AGGGTCCCAACATTGTACTCAGCGAGGAACTGGCTG...TGCAGCTGTGGCAGGGGATCGTGGCAGCAGGGTATGGAAATGGGCAAGTGCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR-3UTR TCA 90 bp | GGGGAGCTGCAGAATGGGACACTGGTACATGGAGTCCTGAAAGGCACAAACCTCGAGCAGGCCAGGGCTTaGGCTCTGACTAGCCCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: GELQNGTLVHGVLKGTNLEQARA*ALTSPL Trigger: GAGGGGGCTAGTCAGAGCTCAAGCCCTGGCCTGCTC...GAGGTTTGTGCCTTTCAGGACTCCATGTACCAGTGTCCCATTCTGCAGCTCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR GCA 90 bp | CCATGCATGTGGACTCCTGTCTCCTCTTCTGAACTCACTTGCCCGGCACTGCTTGCCTTGCCTAGCTCCTaGTCGCCTGCCTCAGTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: PCMWTPVSSSELTCPALLALPSS*SPASVA Trigger: GGCCACTGAGGCAGGCGAGCAGGAGCTAGGCAAGGC...AAGCAGTGCCGGGCAAGTGAGTTCAGAAGAGGAGACAGGAGTCCACATGCATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTGGCTATCATGGTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGATTCCCCGGCGGCAACGGAGAGTaGAGAGGAAAGCACCTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: CGYHGTEGDHSWSWLGFPGGNGE*RGKHLP Trigger: GGGGAGGTGCTTTCCTCTCCACTCTCCGTTGCCGCC...GGGGAATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACCATGATAGCCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGGTCCAGGGCCCACTCAGCCCTACTGTGTTCCCCATTCCTCTCCACTTCTTACTCCAGTCCCCAGTGTaGGAGGAACCAGCAACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: GVQGPLSPTVFPIPLHFLLQSPV*EEPATG Trigger: TCCTGTTGCTGGTTCCTCTCACACTGGGGACTGGAG...TAAGAAGTGGAGAGGAATGGGGAACACAGTAGGGCTGAGTGGGCCCTGGACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGCCCACTCAGCCCTACTGTGTTCCCCATTCCTCTCCACTTCTTAAAAGCACACCTGGATGCTGCCCCTaGAGACCACTCCCTTGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: GPTQPYCVPHSSPLLKSTPGCCP*RPLPWA Trigger: GGCCCAAGGGAGTGGTCTGCAGGGGCAGCATCCAGG...TGTGCTTTTAAGAAGTGGAGAGGAATGGGGAACACAGTAGGGCTGAGTGGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR GCA 90 bp | AACCAGAGAGAAAGCACATCATGGGGTCCAGGGCCCACTCAGCCCTACTGTGTTCAGACCAGCCTGCCTTaGCTAGCTCCTGCTCGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: NQRESTSWGPGPTQPYCVQTSLP*LAPARL Trigger: CAGGCGAGCAGGAGCTAGGCAAGGCAGGCTGGTCTG...AACACAGTAGGGCTGAGTGGGCCCTGGACCCCATGATGTGCTTTCTCTCTGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGAGACTAGGGTCCGGGCAGGTGAGTTGGAGCAGGCCCCAGAGTGGCCTTTCAGAGTCGTTTCCTGCCTaGGTCTGTCCTAATCCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: RRLGSGQVSWSRPQSGLSESFPA*VCPNPS Trigger: GGAAGGATTAGGACAGACGCAGGCAGGAAACGACTC...TGAAAGGCCACTCTGGGGCCTGCTCCAACTCACCTGCCCGGACCCTAGTCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCAAGACTCCGGAGGGTTGGGCCCAGGCTTCAGAGACAAGAGAAAGGCAGACTGAGGGGGACCATTCCTaGAGCTGGCTAGGATTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: LKTPEGWAQASETRERQTEGDHS*SWLGFP Trigger: GGGGAATCCTAGCCAGCTCCAGGAATGGTCCCCCTC...AGTCTGCCTTTCTCTTGTCTCTGAAGCCTGGGCCCAACCCTCCGGAGTCTTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR TCA 90 bp | AACCAGAGAGAAAGCACATCATGGGGTCCAGGGCCCACTCAGCCCTACTGTGTTACGACATCGCAGCTGTaGCAGACATCCTGGCCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: NQRESTSWGPGPTQPYCVTTSQL*QTSWPS Trigger: GCTGGGCCAGGATGTCTGTCACAGCTGCGATGTCGT...AACACAGTAGGGCTGAGTGGGCCCTGGACCCCATGATGTGCTTTCTCTCTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCGCAGGCCAGTGGAGGCACTGTTGTGATGAAGTCATGAAGATCGAAACTCCTCCAGGGCTTGAGCTCTaGCTAGCCCCCTCCCCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: LAGQWRHCCDEVMKIETPPGLEL*LAPSPC Trigger: GCAAGGGGAGGGGGCTAGTCAGAGCTCAAGCCCTGG...AGGAGTTTCGATCTTCATGACTTCATCACAACAGTGCCTCCACTGGCCTGCGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCTCCGGAGGTCCCTGTGAGGGGCTGCTCCTGCAGAATAATGCCATCTCAGCATATTACAGTGACAGGTaGCAGTCAGGGCTGAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: ASGGPCEGLLLQNNAISAYYSDR*QSGLSR Trigger: CCTGCTCAGCCCTGACTGTCACCTGTCACTGTAATA...TGCTGAGATGGCATTATTCTGCAGGAGCAGCCCCTCACAGGGACCTCCGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGGTCCAGGGCCCACTCAGCCCTACTGTGTTCCCCATTCCTCTCCACTTCTTAAACCTTTTCCCTGGATaGTGCCCCTGCAGACCACTC | + |
|
Preference number: 2 (lower is better) Translates to: GVQGPLSPTVFPIPLHFLNLFPG*CPCRPL Trigger: GAGTGGTCTGCAGGGGCAGCATCCAGGGAAAAGGTT...TAAGAAGTGGAGAGGAATGGGGAACACAGTAGGGCTGAGTGGGCCCTGGACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR GCA 90 bp | AACCAGAGAGAAAGCACATCATGGGGTCCAGGGCCCACTCAGCCCTACTGTGTTCAGTCCCAACCTGGATaGAACCCCTGCCCTGGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: NQRESTSWGPGPTQPYCVQSQPG*NPCPGE Trigger: TTCCCCAGGGCAGGGGTTGCATCCAGGTTGGGACTG...AACACAGTAGGGCTGAGTGGGCCCTGGACCCCATGATGTGCTTTCTCTCTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCTCAAGACTCCGGAGGGTTGGGCCCAGGCTTCAGAGACAAGAGAAAGGCAGAAGAGCAGAGAAGCCCTaGAGAACTGGATGGAGGCGC | + |
|
Preference number: 2 (lower is better) Translates to: LSRLRRVGPRLQRQEKGRRAEKP*RTGWRR Trigger: GCGCCTCCATCCAGTTCTGCAGGGCTTCTCTGCTCT...TCTGCCTTTCTCTTGTCTCTGAAGCCTGGGCCCAACCCTCCGGAGTCTTGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR CCA 90 bp | TCATACAGGCGCACTTGCCCATTTCCATACCCTGCTGCCACGATCCCCTGCCACACCCTTGTTGAGTTCTaGGCACTTCACCCAGCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SYRRTCPFPYPAATIPCHTLVEF*ALHPAR Trigger: CCTGGCTGGGTGAAGTGCCCAGAACTCAACAAGGGT...GTGGCAGGGGATCGTGGCAGCAGGGTATGGAAATGGGCAAGTGCGCCTGTATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR-3UTR CCA 90 bp | AACCAGAGAGAAAGCACATCATGGGGTCCAGGGCCCACTCAGCCCTACTGTGTTCCCGAACCTTTTCCCTaGATGCTGCCCCTGCAGACC | + |
|
Preference number: 2 (lower is better) Translates to: NQRESTSWGPGPTQPYCVPEPFP*MLPLQT Trigger: GGTCTGCAGGGGCAGCATCCAGGGAAAAGGTTCGGG...AACACAGTAGGGCTGAGTGGGCCCTGGACCCCATGATGTGCTTTCTCTCTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR CCA 90 bp | CTACCCCCAAACAATGATGCTACAACAGGCAACCCGCTCCCTCAGCATCCCCAGGTCCTCCCTGGAGCTTaGTGTGGCTGTGATACTGAG | + |
|
Preference number: 2 (lower is better) Translates to: LPPNNDATTGNPLPQHPQVLPGA*CGCDTE Trigger: CTCAGTATCACAGCCACACCAAGCTCCAGGGAGGAC...CTGGGGATGCTGAGGGAGCGGGTTGCCTGTTGTAGCATCATTGTTTGGGGGTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGGAGCTGCAGAATGGGACACTGGTACATGGAGTCCTGAAAGGCACAAACCTCGAGAGGAGGGTCAGCTaGAGGCTGATGGAAAGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: GELQNGTLVHGVLKGTNLERRVS*RLMESG Trigger: CCCACTTTCCATCAGCCTCCAGCTGACCCTCCTCTC...GAGGTTTGTGCCTTTCAGGACTCCATGTACCAGTGTCCCATTCTGCAGCTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR GCA 90 bp | CCATGCATGTGGACTCCTGTCTCCTCTTCTGAACTCACTTGCCCGGCACTGCTTGTCCCTGTGAGGGGCTaGTCCTGCAGAATAATGCCA | + |
|
Preference number: 2 (lower is better) Translates to: PCMWTPVSSSELTCPALLVPVRG*SCRIMP Trigger: TGGCATTATTCTGCAGGAGCAGCCCCTCACAGGGAC...AAGCAGTGCCGGGCAAGTGAGTTCAGAAGAGGAGACAGGAGTCCACATGCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGGAGCTGCAGAATGGGACACTGGTACATGGAGTCCTGAAAGGCACAAACCTCGTCTTCTCGAGGACATaGTCTCTGAGGACCAGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: GELQNGTLVHGVLKGTNLVFSRT*SLRTSG Trigger: GCCACTGGTCCTCAGAGACCATGTCCTCGAGAAGAC...GAGGTTTGTGCCTTTCAGGACTCCATGTACCAGTGTCCCATTCTGCAGCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGCCATCTCAGCAGAGATTCGGGCCTTGCTTTCTTCCTATTACAGTGACAGGTGCTCGCCTGCCTCAGTaGCCCCAGTCCCAACCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: MPSQQRFGPCFLPITVTGARLPQ*PQSQPG Trigger: TCCAGGTTGGGACTGGGGCCACTGAGGCAGGCGAGC...ACCTGTCACTGTAATAGGAAGAAAGCAAGGCCCGAATCTCTGCTGAGATGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR CCA 90 bp | AACCAGAGAGAAAGCACATCATGGGGTCCAGGGCCCACTCAGCCCTACTGTGTTTCTTATCAGAACCTGTaGCCTCCGGAGGTCCCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: NQRESTSWGPGPTQPYCVSYQNL*PPEVPV Trigger: CACAGGGACCTCCGGAGGCCACAGGTTCTGATAAGA...AACACAGTAGGGCTGAGTGGGCCCTGGACCCCATGATGTGCTTTCTCTCTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR TCA 90 bp | AATCCTGGTATTCGGGTCAGTAAGGTGAACTCAGGTCCCGACCTCCAGACACACACGTTCCCACACAGATaGAGTGGACGCTGGCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: NPGIRVSKVNSGPDLQTHTFPHR*SGRWQQ Trigger: TTGCTGCCAGCGTCCACTTCATCTGTGTGGGAACGT...GTGTGTCTGGAGGTCGGGACCTGAGTTCACCTTACTGACCCGAATACCAGGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR-3UTR CCA 90 bp | TGCCCAGCCAGTTCCTCGCTGAGTACAATGTTGGGACCCTTAGCGGGGATATCACCCACACAGATGAAGTaGACGCTGGCAGCAATTCCT | + |
|
Preference number: 2 (lower is better) Translates to: CPASSSLSTMLGPLAGISPTQMK*TLAAIP Trigger: AGGAATTGCTGCCAGCGTCCACTTCATCTGTGTGGG...TGATATCCCCGCTAAGGGTCCCAACATTGTACTCAGCGAGGAACTGGCTGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR-3UTR CCA 90 bp | CTCGCAGGCCAGTGGAGGCACTGTTGTGATGAAGTCATGAAGATCGAAACTCCTCTCCTCTTCCTCCACTaGACTAGGACGGAAGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LAGQWRHCCDEVMKIETPLLFLH*TRTEGW Trigger: CCAGCCTTCCGTCCTAGTCCAGTGGAGGAAGAGGAG...AGGAGTTTCGATCTTCATGACTTCATCACAACAGTGCCTCCACTGGCCTGCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR CCA 90 bp | ACGTCACAGTCTTATCAGAACCTGTGGCCTCCGGAGGTCCCTGTGAGGGGCTGCACCAGCAACAGGATCTaGCCAAGAAAGAAAATGACC | + |
|
Preference number: 2 (lower is better) Translates to: TSQSYQNLWPPEVPVRGCTSNRI*PRKKMT Trigger: GGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTGGT...GCAGCCCCTCACAGGGACCTCCGGAGGCCACAGGTTCTGATAAGACTGTGACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR CCA 90 bp | CCATGCATGTGGACTCCTGTCTCCTCTTCTGAACTCACTTGCCCGGCACTGCTTGAGCCATCCCCACCCTaGCTAGCAATGTTTACAGAC | + |
|
Preference number: 2 (lower is better) Translates to: PCMWTPVSSSELTCPALLEPSPP*LAMFTD Trigger: GTCTGTAAACATTGCTAGCCAGGGTGGGGATGGCTC...AAGCAGTGCCGGGCAAGTGAGTTCAGAAGAGGAGACAGGAGTCCACATGCATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCGCAGGCCAGTGGAGGCACTGTTGTGATGAAGTCATGAAGATCGAAACTCCTAACCACCCCAAGCCCTaGCCAAGCAGGGGTCCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: LAGQWRHCCDEVMKIETPNHPKP*PSRGPY Trigger: ATAAGGACCCCTGCTTGGCCAGGGCTTGGGGTGGTT...AGGAGTTTCGATCTTCATGACTTCATCACAACAGTGCCTCCACTGGCCTGCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAGTGCAAGATGGATTCCGTACACATGACCTCACGCTCACCAGTCATGGTATGGCCCACCACAGGGCCTaGGATACAGAGGTACCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: EVQDGFRTHDLTLTSHGMAHHRA*DTEVPP Trigger: AGGAGGTACCTCTGTATCCCAGGCCCTGTGGTGGGC...CATACCATGACTGGTGAGCGTGAGGTCATGTGTACGGAATCCATCTTGCACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR CAA 90 bp | TCCACTGATGTCCCTTCTCCCTCCAGAGGTCCTCGATTCCACCTCTaGGCCCACACCACTCTTACCCTAGAAGAAGTGCAAGATGGATTC | + |
|
Preference number: 2 (lower is better) Translates to: STDVPSPSRGPRFHL*AHTTLTLEEVQDGF Trigger: GAATCCATCTTGCACTTCTTCTAGGGTAAGAGTGGTGTGGGCCAAGAGGTGGAATCGAGGACCTCTGGAGGGAGAAGGGACATCAGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTCCTCGGGCAAACATAGCCTGTACTGAAGAAGCATCGCCTGAGTCCAAGGCGAGATGGGGGCAAGGATaGGAGCAAGATCCAGATGAC | + |
|
Preference number: 2 (lower is better) Translates to: IPRANIACTEEASPESKARWGQG*EQDPDD Trigger: GTCATCTGGATCTTGCTCTCATCCTTGCCCCCATCT...CGCCTTGGACTCAGGCGATGCTTCTTCAGTACAGGCTATGTTTGCCCGAGGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR-3UTR TCA 90 bp | GAAGTGCAAGATGGATTCCGTACACATGACCTCACGCTCACCAGTCATGGTATGCGAGGACATGGTCTCTaGGGACCAGTGGCTTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: EVQDGFRTHDLTLTSHGMRGHGL*GPVASA Trigger: TGCAGAAGCCACTGGTCCTCAGAGACCATGTCCTCG...CATACCATGACTGGTGAGCGTGAGGTCATGTGTACGGAATCCATCTTGCACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCTCAAGACTCCGGAGGGTTGGGCCCAGGCTTCAGAGACAAGAGAAAGGCAGAAGCTCTTCTTTGACATaGGTAAGGGAAAGAGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: LSRLRRVGPRLQRQEKGRSSSLT*VRERAG Trigger: CCCAGCTCTTTCCCTTACTCATGTCAAAGAAGAGCT...TCTGCCTTTCTCTTGTCTCTGAAGCCTGGGCCCAACCCTCCGGAGTCTTGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAGTGCAAGATGGATTCCGTACACATGACCTCACGCTCACCAGTCATGGTATGCTCAGCCTCTCTGCATaGTCCAGCCCACTGCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: EVQDGFRTHDLTLTSHGMLSLSA*SSPLQV Trigger: CACTTGCAGTGGGCTGGATCATGCAGAGAGGCTGAG...CATACCATGACTGGTGAGCGTGAGGTCATGTGTACGGAATCCATCTTGCACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAGTGCAAGATGGATTCCGTACACATGACCTCACGCTCACCAGTCATGGTATGCAGTGGCTTCTGCAGTaGTCTGAACCCACCTCTCGG | + |
|
Preference number: 2 (lower is better) Translates to: EVQDGFRTHDLTLTSHGMQWLLQ*SEPTSR Trigger: CCGAGAGGTGGGTTCAGAGCACTGCAGAAGCCACTG...CATACCATGACTGGTGAGCGTGAGGTCATGTGTACGGAATCCATCTTGCACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGGAGCTGCAGAATGGGACACTGGTACATGGAGTCCTGAAAGGCACAAACCTCCCCCTAAGCGCTTCCTaGGAGAAAACTGGAACAACT | + |
|
Preference number: 2 (lower is better) Translates to: GELQNGTLVHGVLKGTNLPLSAS*EKTGTT Trigger: AGTTGTTCCAGTTTTCTCCCAGGAAGCGCTTAGGGG...GAGGTTTGTGCCTTTCAGGACTCCATGTACCAGTGTCCCATTCTGCAGCTCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCATCCTCACCTGGTACTTCCTCCTCCCCCAGAGGAGAACCCTGCCTGGCTACTCTCTCCTCTGTTCTTaGTTTCTTTATCCACTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: PILTWYFLLPQRRTLPGYSLLCS*FLYPLL Trigger: CAGAAGTGGATAAAGAAACCAAGAACAGAGGAGAGA...GTAGCCAGGCAGGGTTCTCCTCTGGGGGAGGAGGAAGTACCAGGTGAGGATGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCGCAGGCCAGTGGAGGCACTGTTGTGATGAAGTCATGAAGATCGAAACTCCTAGAGAAAGCACATCATaGGGTCCAGGGCCCACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LAGQWRHCCDEVMKIETPRESTS*GPGPTQ Trigger: CTGAGTGGGCCCTGGACCCCATGATGTGCTTTCTCT...AGGAGTTTCGATCTTCATGACTTCATCACAACAGTGCCTCCACTGGCCTGCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGGAGCTGCAGAATGGGACACTGGTACATGGAGTCCTGAAAGGCACAAACCTCGTTGTGATGAAGTCATaGAGATCGAAACTCCTGCGC | + |
|
Preference number: 2 (lower is better) Translates to: GELQNGTLVHGVLKGTNLVVMKS*RSKLLR Trigger: GCGCAGGAGTTTCGATCTTCATGACTTCATCACAAC...GAGGTTTGTGCCTTTCAGGACTCCATGTACCAGTGTCCCATTCTGCAGCTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAGCACTGTCTCTGAGGACCAGTaGCTTCTGCAGTGCTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: IWPRKKMTQGQLGSRSSTVSEDQ*LLQCSE Trigger: TTCAGAGCACTGCAGAAGCCACTGGTCCTCAGAGAC...AGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAGTGCAAGATGGATTCCGTACACATGACCTCACGCTCACCAGTCATGGTATGGGCCAAGAAAGAAAATaGCCCAAGGACAACTGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: EVQDGFRTHDLTLTSHGMGQERK*PKDNWA Trigger: AGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCC...CATACCATGACTGGTGAGCGTGAGGTCATGTGTACGGAATCCATCTTGCACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAGTGCAAGATGGATTCCGTACACATGACCTCACGCTCACCAGTCATGGTATGTTCTGTTTCCCTCCATaGATGTGGACTCCTGTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: EVQDGFRTHDLTLTSHGMFCFPP*MWTPVS Trigger: GGAGACAGGAGTCCACATGCATGGAGGGAAACAGAA...CATACCATGACTGGTGAGCGTGAGGTCATGTGTACGGAATCCATCTTGCACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCAAGACTCCGGAGGGTTGGGCCCAGGCTTCAGAGACAAGAGAAAGGCAGACTTATTTAACAGCTCGATaGCTTCTTTCACTTGTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LKTPEGWAQASETRERQTYLTAR*LLSLVF Trigger: GAAGACAAGTGAAAGAAGGCATCGAGCTGTTAAATA...AGTCTGCCTTTCTCTTGTCTCTGAAGCCTGGGCCCAACCCTCCGGAGTCTTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAGCACTAAGTTGTGGCTATCATaGTACAGAGGGGGACCATTC | + |
|
Preference number: 2 (lower is better) Translates to: IWPRKKMTQGQLGSRSSTKLWLS*YRGGPF Trigger: GAATGGTCCCCCTCTGTACCATGATAGCCACAACTT...AGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGCCATCTCAGCAGAGATTCGGGCCTTGCTTTCTTCCTATTACAGTGACAGGTGGCTGTGATACTGAGTaGTCAGACAAGGACTTGATG | + |
|
Preference number: 2 (lower is better) Translates to: MPSQQRFGPCFLPITVTGGCDTE*SDKDLM Trigger: CATCAAGTCCTTGTCTGAGCACTCAGTATCACAGCC...ACCTGTCACTGTAATAGGAAGAAAGCAAGGCCCGAATCTCTGCTGAGATGGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR CCA 72 bp | GTGACTAGTCCCTCCGGGGTGAGGCCACCTGGTGCCTaGGCTCAGGCACCTCTCTCTCAAGACTCCGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VTSPSGVRPPGA*AQAPLSQDSGG Trigger: CCCTCCGGAGTCTTGAGAGAGAGGTGCCTGAGCCCAGGCACCAGGTGGCCTCACCCCGGAGGGACTAGTCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR GCA 72 bp | TTGGATGTACTGGGCGGGCAACTCGGACCTGGGCCTTaGTGTTCATGCCCCTCTGCACCTTCCCTGCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LDVLGGQLGPGP*CSCPSAPSLPC Trigger: GCAGGGCAGGGAAGGTGCAGAGGGGCATGAACAGCAAGGCCCAGGTCCGAGTTGCCCGCCCAGTACATCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR GCA 72 bp | GGCAGCGTGTGTTGCCGCCTGGCAGCTCAGCCTCTCTaGATGATCCAGCCCACTGCAAGTGGTGCCCTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: GSVCCRLAAQPL*MIQPTASGALR Trigger: CCTAAGGGCACCACTTGCAGTGGGCTGGATCATGCAGAGAGGCTGAGCTGCCAGGCGGCAACACACGCTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR CCA 72 bp | TCCCCCAGAGGAGAACCCTGCCTGGCTACCCCTTTATaGCAGCGTGTGTTGCCGCCTGGCAGCTCAGCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SPRGEPCLATPL*QRVLPPGSSAS Trigger: AGAGGCTGAGCTGCCAGGCGGCAACACACGCTGCCATAAAGGGGTAGCCAGGCAGGGTTCTCCTCTGGGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR TCA 72 bp | TCCAGCCCACTGCAAGTGGTGCCCTTAGGGTGCAGGTaGGGGGTCCTACAGGAGTGGAGGGGGCATGGACAT | + |
|
Preference number: 3 (lower is better) Translates to: SSPLQVVPLGCR*GVLQEWRGHGH Trigger: ATGTCCATGCCCCCTCCACTCCTGTAGGACCCCTCACCTGCACCCTAAGGGCACCACTTGCAGTGGGCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR GCA 72 bp | TGGAGGGCCCCTGTGCTGGCATCATACAGGCGCACTTaGCCATTTCCATACCCTGCTGCCACGATCCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: WRAPVLASYRRT*PFPYPAATIPC Trigger: GCAGGGGATCGTGGCAGCAGGGTATGGAAATGGGCAAGTGCGCCTGTATGATGCCAGCACAGGGGCCCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR GCA 72 bp | GTGGAACAACCCAGCGTCAGCCCTGCAGCGCCTTCCTaGCACACATGCCACTCCACTGATGTCCCTTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: VEQPSVSPAAPS*HTCHSTDVPSP Trigger: GGGAGAAGGGACATCAGTGGAGTGGCATGTGTGGCAGGAAGGCGCTGCAGGGCTGACGCTGGGTTGTTCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR CCA 72 bp | GCACCAGTTGGCCAGCCTGGGCTCCTCTTCCTCCACTaGACTAGGACGGAAGGCTGGGGAGGGGTAATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: APVGQPGLLFLH*TRTEGWGGVME Trigger: TTCCATTACCCCTCCCCAGCCTTCCGTCCTAGTCCAGTGGAGGAAGAGGAGCCCAGGCTGGCCAACTGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR CCA 72 bp | CAGCGGGAGGGCACAAGGCTGGAGCCATCCCCACCCTaGCTAGCAATGTTTACAGACCAGCCTGCCTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: QREGTRLEPSPP*LAMFTDQPALP Trigger: AGGCAAGGCAGGCTGGTCTGTAAACATTGCTAGCCAGGGTGGGGATGGCTCCAGCCTTGTGCCCTCCCGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR CCA 72 bp | CTGGTACTTCCTCCTCCCCCAGAGGAGAACCCTGCCTaGCTACCCCTTTATGGCAGCGTGTGTTGCCGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LVLPPPPEENPA*LPLYGSVCCRL Trigger: CAGGCGGCAACACACGCTGCCATAAAGGGGTAGCCAGGCAGGGTTCTCCTCTGGGGGAGGAGGAAGTACCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR TCA 72 bp | CCCTGCAGCGCCTTCCTGCCACACATGCCACTCCACTaGTGTCCCTTCTCCCTCCAGAGGTCCTCGATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PCSAFLPHMPLH*CPFSLQRSSIP Trigger: TGGAATCGAGGACCTCTGGAGGGAGAAGGGACATCAGTGGAGTGGCATGTGTGGCAGGAAGGCGCTGCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR GCA 72 bp | GGCATCATACAGGCGCACTTGCCCATTTCCATACCCTaGTGCCACGATCCCCTGCCACAGCTGCACAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GIIQAHLPISIP*CHDPLPQLHRG Trigger: CCCTCTGTGCAGCTGTGGCAGGGGATCGTGGCAGCAGGGTATGGAAATGGGCAAGTGCGCCTGTATGATGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR GCA 72 bp | CTGTGGCCTCCGGAGGTCCCTGTGAGGGGCTGCTCCTaGAGAATAATGCCATCTCAGCAGAGATTCGGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LWPPEVPVRGCS*RIMPSQQRFGP Trigger: AGGCCCGAATCTCTGCTGAGATGGCATTATTCTGCAGGAGCAGCCCCTCACAGGGACCTCCGGAGGCCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR GCA 72 bp | TCACCTGGTACTTCCTCCTCCCCCAGAGGAGAACCCTaGCTGGCTACCCCTTTATGGCAGCGTGTGTTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: SPGTSSSPRGEP*LATPLWQRVLP Trigger: CGGCAACACACGCTGCCATAAAGGGGTAGCCAGGCAGGGTTCTCCTCTGGGGGAGGAGGAAGTACCAGGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR TCA 72 bp | ATGGGAGGGACAAAGTGGGATGGGAAGACAGCAGGGTaGGTATTGGGTGCATGGGGTCAGTGGGGGACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: MGGTKWDGKTAG*VLGAWGQWGTG Trigger: CCCAGTCCCCCACTGACCCCATGCACCCAATACTCACCCTGCTGTCTTCCCATCCCACTTTGTCCCTCCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR GCA 72 bp | TCCCGACCTCCAGACACACAGGACACCCGAGTCATCTaGTGTCACCATGTCAGCAACACCATCCTGCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SRPPDTQDTRVI*CHHVSNTILPL Trigger: CAGGGGCAGGATGGTGTTGCTGACATGGTGACAGCAGATGACTCGGGTGTCCTGTGTGTCTGGAGGTCGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR GCA 72 bp | AAAGTGGGATGGGAAGACAGCAGGGTGAGTATTGGGTaGATGGGGTCAGTGGGGGACTGGGAGGAAGGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: KVGWEDSRVSIG*MGSVGDWEEGA Trigger: GGCACCTTCCTCCCAGTCCCCCACTGACCCCATGCACCCAATACTCACCCTGCTGTCTTCCCATCCCACTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCGCAGGCCAGTGGAGGCACTGTTGTGATGAAGTCATGAAGATCGAAACTCCTGGCCTTCTCGCTCGGTaGCACCCCTTCCCCCGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LAGQWRHCCDEVMKIETPGLLAR*HPFPRR Trigger: TCTGCGGGGGAAGGGGTGCAACCGAGCGAGAAGGCC...AGGAGTTTCGATCTTCATGACTTCATCACAACAGTGCCTCCACTGGCCTGCGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR GCA 72 bp | CTGGGAGAAAACTGGAACAACTCTGCCCTATCTGCCTaGACTAACCAGCCTCCAGGGCGGCAACGGAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LGENWNNSALSA*TNQPPGRQRRV Trigger: CACTCTCCGTTGCCGCCCTGGAGGCTGGTTAGTGCAGGCAGATAGGGCAGAGTTGTTCCAGTTTTCTCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR GCA 72 bp | CAGAACCTGTGGCCTCCGGAGGTCCCTGTGAGGGGCTaGTCCTGCAGAATAATGCCATCTCAGCAGAGATTC | + |
|
Preference number: 3 (lower is better) Translates to: QNLWPPEVPVRG*SCRIMPSQQRF Trigger: GAATCTCTGCTGAGATGGCATTATTCTGCAGGAGCAGCCCCTCACAGGGACCTCCGGAGGCCACAGGTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR GCA 72 bp | GTCCCCCTTTCCTGTCTCTACTTGCTCCTTCTTTCCTaGCTCAGCACAGGCTCCCATCCCCACCATGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: VPLSCLYLLLLS*LSTGSHPHHAC Trigger: GCAAGCATGGTGGGGATGGGAGCCTGTGCTGAGGCAGGAAAGAAGGAGCAAGTAGAGACAGGAAAGGGGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR CCA 72 bp | GGGCTCCTCTTCCTCCACTGGACTAGGACGGAAGGCTaGGGAGGGGTAATGGAAACCCCTCTTAAGTTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: GLLFLHWTRTEG*GGVMETPLKLW Trigger: CCACAACTTAAGAGGGGTTTCCATTACCCCTCCCCAGCCTTCCGTCCTAGTCCAGTGGAGGAAGAGGAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR CCA 72 bp | AAGCCCTGGCCAAGCAGGGGTCCTTATACCACGAGATaGGTAAGTGAGAGGAGGGTCAGCTGGAGGCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: KPWPSRGPYTTR*VSERRVSWRLM Trigger: CATCAGCCTCCAGCTGACCCTCCTCTCACTTACCCATCTCGTGGTATAAGGACCCCTGCTTGGCCAGGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR TCA 72 bp | ATGGGACCCCGAATCCTGGTATTCGGGTCAGTAAGGTaGACTCAGGTCCCGACCTCCAGACACACAGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: MGPRILVFGSVR*TQVPTSRHTGH Trigger: GTGTCCTGTGTGTCTGGAGGTCGGGACCTGAGTTCACCTTACTGACCCGAATACCAGGATTCGGGGTCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR TCA 72 bp | GCCAAGCAGGGGTCCTTATACCACGAGATGGGTAAGTaGGAGGAGGGTCAGCTGGAGGCTGATGGAAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: AKQGSLYHEMGK*EEGQLEADGKW Trigger: CCACTTTCCATCAGCCTCCAGCTGACCCTCCTCTCACTTACCCATCTCGTGGTATAAGGACCCCTGCTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR TCA 72 bp | AGACCAGTACTCGACCGGAACACGTTCCCACACAGATaGAGTGGACGCTGGCAGCAATTCCTCGGGCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: RPVLDRNTFPHR*SGRWQQFLGQT Trigger: TGTTTGCCCGAGGAATTGCTGCCAGCGTCCACTTCATCTGTGTGGGAACGTGTTCCGGTCGAGTACTGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR CCA 72 bp | AGTACTCGACCGGAACACGTTCCCACACAGATGAAGTaGACGCTGGCAGCAATTCCTCGGGCAAACATAGCC | + |
|
Preference number: 3 (lower is better) Translates to: STRPEHVPTQMK*TLAAIPRANIA Trigger: GGCTATGTTTGCCCGAGGAATTGCTGCCAGCGTCCACTTCATCTGTGTGGGAACGTGTTCCGGTCGAGTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR TCA 72 bp | TGGAAGATGGGGGCAAGGATGAGAGCAAGATCCAGATaGCCCTTGTTGAGTTCTGGGCACTTCACCCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: WKMGARMRARSR*PLLSSGHFTQP Trigger: TGGCTGGGTGAAGTGCCCAGAACTCAACAAGGGTCATCTGGATCTTGCTCTCATCCTTGCCCCCATCTTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR GCA 72 bp | GCACGCTCAGTGGCAATATCTGTGATTGGTGTCTGGTaGCCAGCCAGTTCCTCGCTGAGTACAATGTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ARSVAISVIGVW*PASSSLSTMLG Trigger: TCCCAACATTGTACTCAGCGAGGAACTGGCTGGGCACCAGACACCAATCACAGATATTGCCACTGAGCGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR GCA 72 bp | GAGTCATCTGCTGTCACCATGTCAGCAACACCATCCTaGCCCTGGGCACGCTCAGTGGCAATATCTGTGATT | + |
|
Preference number: 3 (lower is better) Translates to: ESSAVTMSATPS*PWARSVAISVI Trigger: AATCACAGATATTGCCACTGAGCGTGCCCAGGGGCAGGATGGTGTTGCTGACATGGTGACAGCAGATGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR CCA 72 bp | TGGGCACGCTCAGTGGCAATATCTGTGATTGGTGTCTaGTGCCCAGCCAGTTCCTCGCTGAGTACAATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: WARSVAISVIGV*CPASSSLSTML Trigger: CAACATTGTACTCAGCGAGGAACTGGCTGGGCACCAGACACCAATCACAGATATTGCCACTGAGCGTGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR CCA 72 bp | GCTCGATGCCTTCTTTCACTTGTCTTCTCGAGGACATaGTCTCTGAGGACCAGTGGCTTCTGCAGTGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: ARCLLSLVFSRT*SLRTSGFCSAL Trigger: CAGAGCACTGCAGAAGCCACTGGTCCTCAGAGACCATGTCCTCGAGAAGACAAGTGAAAGAAGGCATCGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR CCA 72 bp | CCAGTCCCCAGTGTGAGAGGAACCAGCAACAGGATCTaGCCAAGAAAGAAAATGACCCAAGGACAACTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: PVPSVRGTSNRI*PRKKMTQGQLG Trigger: GCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTGGTTCCTCTCACACTGGGGACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR CCA 72 bp | CAAGTTGTCTACGCAGCAAGCCGGGGAGCTGCAGAATaGGACACTGGTACATGGAGTCCTGAAAGGCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: QVVYAASRGAAE*DTGTWSPERHK Trigger: TTTGTGCCTTTCAGGACTCCATGTACCAGTGTCCCATTCTGCAGCTCCCCGGCTTGCTGCGTAGACAACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR CAA 90 bp | CTACCCCCAAACAATGATGCTACAACAGGCAACCCGCTCCCTCAGCATCCCCAGGATGCCTTCTTTCACTaGTCTTCTCGAGGACATGGT | + |
|
Preference number: 3 (lower is better) Translates to: LPPNNDATTGNPLPQHPQDAFFH*SSRGHG Trigger: ACCATGTCCTCGAGAAGACAAGTGAAAGAAGGCATC...CTGGGGATGCTGAGGGAGCGGGTTGCCTGTTGTAGCATCATTGTTTGGGGGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR TCA 72 bp | GAGGAACCAGCAACAGGATCTGGCCAAGAAAGAAAATaGCCCAAGGACAACTGGGCTCTAGGTCCAGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: EEPATGSGQERK*PKDNWALGPAL Trigger: CAGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGATCCTGTTGCTGGTTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR CCA 72 bp | GCAAGCCGGGGAGCTGCAGAATGGGACACTGGTACATaGAGTCCTGAAAGGCACAAACCTCTTTTGTTACTG | + |
|
Preference number: 3 (lower is better) Translates to: ASRGAAEWDTGT*SPERHKPLLLL Trigger: CAGTAACAAAAGAGGTTTGTGCCTTTCAGGACTCCATGTACCAGTGTCCCATTCTGCAGCTCCCCGGCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR CAA 90 bp | AACCAGAGAGAAAGCACATCATGGGGTCCAGGGCCCACTCAGCCCTACTGTGTTGCAGAGATTCGGGCCTaGCTTTCTTCCTATTACAGT | + |
|
Preference number: 3 (lower is better) Translates to: NQRESTSWGPGPTQPYCVAEIRA*LSSYYS Trigger: ACTGTAATAGGAAGAAAGCAAGGCCCGAATCTCTGC...AACACAGTAGGGCTGAGTGGGCCCTGGACCCCATGATGTGCTTTCTCTCTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR TCA 72 bp | AAGCATCGCCTGAGTCCAAGGCGTGCCAATAAACCATaGCGGAGCCATCAGACTCATACATCTGGAAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: KHRLSPRRANKP*RSHQTHTSGRW Trigger: CCATCTTCCAGATGTATGAGTCTGATGGCTCCGTCATGGTTTATTGGCACGCCTTGGACTCAGGCGATGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR TCA 72 bp | TACCCTAGAAGAAGTGCAAGATGGATTCCGTACACATaGCCTCACGCTCACCAGTCATGGTATGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: YPRRSARWIPYT*PHAHQSWYVCV Trigger: CACACACACATACCATGACTGGTGAGCGTGAGGTCATGTGTACGGAATCCATCTTGCACTTCTTCTAGGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR GCA 72 bp | TTTCTTGGGTCAAGCAGTTTCTCCTCCAGTTCTCTCTaGTTCCAGTTTGTGCTGCTAGTAACTTGCTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: FLGSSSFSSSSL*FQFVLLVTCCL Trigger: CAAACAGCAAGTTACTAGCAGCACAAACTGGAAGCAGAGAGAACTGGAGGAGAAACTGCTTGACCCAAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGGACATAGATGGACAACCTAAAGATCTAGACATGGGAGGGACAAAGTGGGATTTCTCTCCTCTGTTCTaGGTTTCTTTATCCACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: MDIDGQPKDLDMGGTKWDFSPLF*VSLSTS Trigger: AGAAGTGGATAAAGAAACCAAGAACAGAGGAGAGAA...ATCCCACTTTGTCCCTCCCATGTCTAGATCTTTAGGTTGTCCATCTATGTCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR CAA 72 bp | GTGGAGGGCCCCTGTGCTGGCATCATACAGGCGCACTaGCCCATTTCCATACCCTGCTGCCACGATCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VEGPCAGIIQAH*PISIPCCHDPL Trigger: CAGGGGATCGTGGCAGCAGGGTATGGAAATGGGCAAGTGCGCCTGTATGATGCCAGCACAGGGGCCCTCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| 3UTR CAA 72 bp | TTTGGATGTACTGGGCGGGCAACTCGGACCTGGGCCTaGCTGTTCATGCCCCTCTGCACCTTCCCTGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FGCTGRATRTWA*LFMPLCTFPAL Trigger: CAGGGCAGGGAAGGTGCAGAGGGGCATGAACAGCAAGGCCCAGGTCCGAGTTGCCCGCCCAGTACATCCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCAGCCAGTTCCTCGCTGAGTACAATGTTGGGACCCTTAGCGGGGATATCACCTCAGGGGCAGCACTaGGAAGCTGGGCGCTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CPASSSLSTMLGPLAGISPQGQH*EAGRSV Trigger: GACCGAGCGCCCAGCTTCTCAGTGCTGCCCCTGAGG...TGATATCCCCGCTAAGGGTCCCAACATTGTACTCAGCGAGGAACTGGCTGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| CDS-3UTR TCA 90 bp | CCATGCATGTGGACTCCTGTCTCCTCTTCTGAACTCACTTGCCCGGCACTGCTTCCTCAGGGGCAGCACTaGGAAGCTGGGCGCTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PCMWTPVSSSELTCPALLPQGQH*EAGRSV Trigger: GACCGAGCGCCCAGCTTCTCAGTGCTGCCCCTGAGG...AAGCAGTGCCGGGCAAGTGAGTTCAGAAGAGGAGACAGGAGTCCACATGCATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCTATCATGGTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGATTCCCCACGTGGAGCTGGCGCTaGGCCAAGGGCACACCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CGYHGTEGDHSWSWLGFPTWSWR*AKGTPS Trigger: TGAGGGTGTGCCCTTGGCCCAGCGCCAGCTCCACGT...GGGGAATCCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACCATGATAGCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCGCACTTGCCCATTTCCATACCCTGCTGCCACGATCCCCTGCCACAGCTGTCTTTAACGTGGAGCTaGCGCTGGGCCAAGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: QAHLPISIPCCHDPLPQLSLTWS*RWAKGT Trigger: TGTGCCCTTGGCCCAGCGCCAGCTCCACGTTAAAGA...CAGCTGTGGCAGGGGATCGTGGCAGCAGGGTATGGAAATGGGCAAGTGCGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| CDS-3UTR CCA 90 bp | ACAGTCTTATCAGAACCTGTGGCCTCCGGAGGTCCCTGTGAGGGGCTGCTCCTGCTGCACAGAGGGGCATaGGACCCCGAATCCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TVLSEPVASGGPCEGLLLLHRGA*DPESWY Trigger: ATACCAGGATTCGGGGTCCCATGCCCCTCTGTGCAG...CAGGAGCAGCCCCTCACAGGGACCTCCGGAGGCCACAGGTTCTGATAAGACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCCGGAGGTCCCTGTGAGGGGCTGCTCCTGCAGAATAATGCCATCTCAGCACAGCCAGTTCCTCGCTaGGTACAATGTTGGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASGGPCEGLLLQNNAISAQPVPR*VQCWDP Trigger: AGGGTCCCAACATTGTACTCAGCGAGGAACTGGCTG...TGCTGAGATGGCATTATTCTGCAGGAGCAGCCCCTCACAGGGACCTCCGGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| CDS-3UTR CCA 90 bp | AGACACACAGGACACCCGAGTCATCTGCTGTCACCATGTCAGCAACACCATCCTACGTGGAGCTGGCGCTaGGCCAAGGGCACACCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RHTGHPSHLLSPCQQHHPTWSWR*AKGTPS Trigger: TGAGGGTGTGCCCTTGGCCCAGCGCCAGCTCCACGT...AGGATGGTGTTGCTGACATGGTGACAGCAGATGACTCGGGTGTCCTGTGTGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| CDS-3UTR CCA 90 bp | AGGAGACTAGGGTCCGGGCAGGTGAGTTGGAGCAGGCCCCAGAGTGGCCTTTCAGGCAATATCTGTGATTaGTGTCTGGTGCCCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRLGSGQVSWSRPQSGLSGNICD*CLVPSQ Trigger: CTGGCTGGGCACCAGACACCAATCACAGATATTGCC...TGAAAGGCCACTCTGGGGCCTGCTCCAACTCACCTGCCCGGACCCTAGTCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| CDS-3UTR TCA 90 bp | TGGTGTCTGGTGCCCAGCCAGTTCCTCGCTGAGTACAATGTTGGGACCCTTAGCGGACCAGCAGTACTCTaGAGGGGAGGACACACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WCLVPSQFLAEYNVGTLSGPAVL*RGGHTS Trigger: ACTGGTGTGTCCTCCCCTTCAGAGTACTGCTGGTCC...GCTAAGGGTCCCAACATTGTACTCAGCGAGGAACTGGCTGGGCACCAGACACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| CDS-3UTR TCA 90 bp | ACAGTCTTATCAGAACCTGTGGCCTCCGGAGGTCCCTGTGAGGGGCTGCTCCTGCAGTGGCAATATCTGTaGTTGGTGTCTGGTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TVLSEPVASGGPCEGLLLQWQYL*LVSGAQ Trigger: CTGGGCACCAGACACCAATCACAGATATTGCCACTG...CAGGAGCAGCCCCTCACAGGGACCTCCGGAGGCCACAGGTTCTGATAAGACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| CDS-3UTR GCA 90 bp | GCCTCCGGAGGTCCCTGTGAGGGGCTGCTCCTGCAGAATAATGCCATCTCAGCAGACACCCGAGTCATCTaGTGTCACCATGTCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ASGGPCEGLLLQNNAISADTRVI*CHHVSN Trigger: GTTGCTGACATGGTGACAGCAGATGACTCGGGTGTC...TGCTGAGATGGCATTATTCTGCAGGAGCAGCCCCTCACAGGGACCTCCGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| CDS-3UTR CCA 90 bp | TGCCACAGCTGCACAGAGGGGCATGGGACCCCGAATCCTGGTATTCGGGTCAGTAACCTGAGTGATAAGTaGGGGACTCACTCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: CHSCTEGHGTPNPGIRVSNLSDK*GTHSST Trigger: GGTGCTGGAGTGAGTCCCCCACTTATCACTCAGGTT...ACTGACCCGAATACCAGGATTCGGGGTCCCATGCCCCTCTGTGCAGCTGTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| CDS-3UTR TCA 90 bp | AACCAGAGAGAAAGCACATCATGGGGTCCAGGGCCCACTCAGCCCTACTGTGTTGGACCAGCAGTACTCTaGAGGGGAGGACACACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NQRESTSWGPGPTQPYCVGPAVL*RGGHTS Trigger: ACTGGTGTGTCCTCCCCTTCAGAGTACTGCTGGTCC...AACACAGTAGGGCTGAGTGGGCCCTGGACCCCATGATGTGCTTTCTCTCTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCAAGACTCCGGAGGGTTGGGCCCAGGCTTCAGAGACAAGAGAAAGGCAGATCACGGGCTGGCAGCTaGAGTACACTGAGGTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LSRLRRVGPRLQRQEKGRSRAGS*STLRLL Trigger: TAACAACCTCAGTGTACTGCAGCTGCCAGCCCGTGA...TCTGCCTTTCTCTTGTCTCTGAAGCCTGGGCCCAACCCTCCGGAGTCTTGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| CDS-3UTR CCA 90 bp | CTTAAGTTGTGGCTATCATGGTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGTCTTTAACGTGGAGCTaGCGCTGGGCCAAGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LKLWLSWYRGGPFLELARSLTWS*RWAKGT Trigger: TGTGCCCTTGGCCCAGCGCCAGCTCCACGTTAAAGA...CCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACCATGATAGCCACAACTTAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCATCAGACTCATACATCTGGAAGATGGGGGCAAGGATGAGAGCAAGATCCGCACCCTCTTTAACGTaGAGCTGGCGCTGGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EPSDSYIWKMGARMRARSAPSLT*SWRWAK Trigger: CTTGGCCCAGCGCCAGCTCCACGTTAAAGAGGGTGC...GGATCTTGCTCTCATCCTTGCCCCCATCTTCCAGATGTATGAGTCTGATGGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| CDS-3UTR TCA 90 bp | CTTAAGTTGTGGCTATCATGGTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGACGTTCCCACACAGATaGAGTGGACGCTGGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKLWLSWYRGGPFLELARTFPHR*SGRWQQ Trigger: TTGCTGCCAGCGTCCACTTCATCTGTGTGGGAACGT...CCTAGCCAGCTCCAGGAATGGTCCCCCTCTGTACCATGATAGCCACAACTTAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCAGCCAGTTCCTCGCTGAGTACAATGTTGGGACCCTTAGCGGGGATATCATCACGGGCTGGCAGCTaGAGTACACTGAGGTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: CPASSSLSTMLGPLAGISSRAGS*STLRLL Trigger: TAACAACCTCAGTGTACTGCAGCTGCCAGCCCGTGA...TGATATCCCCGCTAAGGGTCCCAACATTGTACTCAGCGAGGAACTGGCTGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| CDS-3UTR GCA 90 bp | CTCAAGACTCCGGAGGGTTGGGCCCAGGCTTCAGAGACAAGAGAAAGGCAGACTTCATACAGGCGCACTTaGCCATTTCCATACCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKTPEGWAQASETRERQTSYRRT*PFPYPA Trigger: AGCAGGGTATGGAAATGGGCAAGTGCGCCTGTATGA...AGTCTGCCTTTCTCTTGTCTCTGAAGCCTGGGCCCAACCCTCCGGAGTCTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| CDS-3UTR CCA 90 bp | CCATGCATGTGGACTCCTGTCTCCTCTTCTGAACTCACTTGCCCGGCACTGCTTAACCTGAGTGATAAGTaGGGGACTCACTCCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: PCMWTPVSSSELTCPALLNLSDK*GTHSST Trigger: GGTGCTGGAGTGAGTCCCCCACTTATCACTCAGGTT...AAGCAGTGCCGGGCAAGTGAGTTCAGAAGAGGAGACAGGAGTCCACATGCATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| 3UTR CAA 72 bp | GTCTGGTGCCCAGCCAGTTCCTCGCTGAGTACAATGTaGGGACCCTTAGCGGGGATATCAAAGACCAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: VWCPASSSLSTM*GPLAGISKTST Trigger: AGTACTGGTCTTTGATATCCCCGCTAAGGGTCCCAACATTGTACTCAGCGAGGAACTGGCTGGGCACCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| CDS-3UTR CCA 90 bp | ATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCCAGCACTCCCACACAGATGAAGTaGACGCTGGCAGCAATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IWPRKKMTQGQLGSRSSTPTQMK*TLAAIP Trigger: AGGAATTGCTGCCAGCGTCCACTTCATCTGTGTGGG...AGTGCTGGACCTAGAGCCCAGTTGTCCTTGGGTCATTTTCTTTCTTGGCCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| CDS-3UTR GCA 90 bp | ATGGACATAGATGGACAACCTAAAGATCTAGACATGGGAGGGACAAAGTGGGATATTTCCATACCCTGCTaGCACGATCCCCTGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: MDIDGQPKDLDMGGTKWDISIPC*HDPLPQ Trigger: CTGTGGCAGGGGATCGTGGCAGCAGGGTATGGAAAT...ATCCCACTTTGTCCCTCCCATGTCTAGATCTTTAGGTTGTCCATCTATGTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| CDS-3UTR CCA 90 bp | GAAGTGCAAGATGGATTCCGTACACATGACCTCACGCTCACCAGTCATGGTATGAATAGAGCCACTTTCTaGGTTTCTGTTCAGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EVQDGFRTHDLTLTSHGMNRATF*VSVQLP Trigger: TGGAAGCTGAACAGAAACCCAGAAAGTGGCTCTATT...CATACCATGACTGGTGAGCGTGAGGTCATGTGTACGGAATCCATCTTGCACTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| CDS TCA 90 bp | CCTCTGGAGCGAGGTCCAGGGCAGAGATGGTCCGGGCGTGGGCACTaGTCTGGACGTGGAGGGCCCCTGTGCTGGCATCATACAGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PLERGPGQRWSGRGH*SGRGGPLCWHHTGA Trigger: TGCGCCTGTATGATGCCAGCACAGGGGCCCTCCACGTCCAGATCAGTGCCCACGCCCGGACCATCTCTGCCCTGGACCTCGCTCCAGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125894.9 ENSMUST00000153148.8 |
||
| CDS CCA 90 bp | GGAGCGAGGTCCAGGGCAGAGATGGTCCGGGCGTGGGCACTGATCTaGACGTGGAGGGCCCCTGTGCTGGCATCATACAGGCGCACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GARSRAEMVRAWALI*TWRAPVLASYRRTC Trigger: GCAAGTGCGCCTGTATGATGCCAGCACAGGGGCCCTCCACGTCCAGATCAGTGCCCACGCCCGGACCATCTCTGCCCTGGACCTCGCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125894.9 ENSMUST00000153148.8 |
||
| CDS CCA 90 bp | AGGTCCAGGGCAGAGATGGTCCGGGCGTGGGCACTGATCTGGACGTaGAGGGCCCCTGTGCTGGCATCATACAGGCGCACTTGCCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: RSRAEMVRAWALIWT*RAPVLASYRRTCPF Trigger: AAATGGGCAAGTGCGCCTGTATGATGCCAGCACAGGGGCCCTCCACGTCCAGATCAGTGCCCACGCCCGGACCATCTCTGCCCTGGACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125894.9 ENSMUST00000153148.8 |
||
| CDS CCA 90 bp | GGCGCTCGGTCCATGAACCACCCCAAAATGCGTGAGATCACGGGCTaGCAGCTGCAGTACACTGAGGTTGTTAGACAGGGCGGCGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GARSMNHPKMREITG*QLQYTEVVRQGGGR Trigger: TCTGCCGCCGCCCTGTCTAACAACCTCAGTGTACTGCAGCTGCCAGCCCGTGATCTCACGCATTTTGGGGTGGTTCATGGACCGAGCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032108.12 ENSMUST00000125894.9 ENSMUST00000153148.8 |
||
| CDS-3UTR CAA 90 bp | TGCCACAGCTGCACAGAGGGGCATGGGACCCCGAATCCTGGTATTCGGGTCAGTTGCAGTACACTGAGGTaGTTAGACAGGGCGGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CHSCTEGHGTPNPGIRVSCSTLR*LDRAAA Trigger: TGCCGCCGCCCTGTCTAACAACCTCAGTGTACTGCA...ACTGACCCGAATACCAGGATTCGGGGTCCCATGCCCCTCTGTGCAGCTGTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032108.12 |
||
| CDS-3UTR CAA 90 bp | AGAGATCCCCCAAATCCAGAGGTTTCTACAGCAAAAGCCAGCTCGGCCCATGGCTGCAGTACACTGAGGTaGTTAGACAGGGCGGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RDPPNPEVSTAKASSAHGCSTLR*LDRAAA Trigger: TGCCGCCGCCCTGTCTAACAACCTCAGTGTACTGCA...GCCATGGGCCGAGCTGGCTTTTGCTGTAGAAACCTCTGGATTTGGGGGATCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153148.8 |
||
| CDS GCA 90 bp | ATCTCAGGATCTCAGCCAGGTCATAACCTGTCACAGCAAAGGAGCTaGCCAATGGATCACAGAACCGAGCACCACACACCTGGGTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ISGSQPGHNLSQQRS*PMDHRTEHHTPGCQ Trigger: CTGACACCCAGGTGTGTGGTGCTCGGTTCTGTGATCCATTGGGCAGCTCCTTTGCTGTGACAGGTTATGACCTGGCTGAGATCCTGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125894.9 ENSMUST00000153148.8 |
||
| CDS CCA 90 bp | GATCTCAGCCAGGTCATAACCTGTCACAGCAAAGGAGCTGCCCAATaGATCACAGAACCGAGCACCACACACCTGGGTGTCAGAAATACA | + |
|
Preference number: 5 (lower is better) Translates to: DLSQVITCHSKGAAQ*ITEPSTTHLGVRNT Trigger: TGTATTTCTGACACCCAGGTGTGTGGTGCTCGGTTCTGTGATCCATTGGGCAGCTCCTTTGCTGTGACAGGTTATGACCTGGCTGAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125894.9 ENSMUST00000153148.8 |
||
| CDS CCA 90 bp | GCAAAGGAGCTGCCCAATGGATCACAGAACCGAGCACCACACACCTaGGTGTCAGAAATACATTCACCATGGCAGTGTTCCACCTCAATA | + |
|
Preference number: 5 (lower is better) Translates to: AKELPNGSQNRAPHT*VSEIHSPWQCSTSI Trigger: TATTGAGGTGGAACACTGCCATGGTGAATGTATTTCTGACACCCAGGTGTGTGGTGCTCGGTTCTGTGATCCATTGGGCAGCTCCTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125894.9 ENSMUST00000153148.8 |
||
| CDS TCA 72 bp | GGCGCTGGGCCAAGGGCACACCCTCAGGGGCAGCACTaGGAAGCTGGGCGCTCGGTCCATGAACCACCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GAGPRAHPQGQH*EAGRSVHEPPQ Trigger: TTGGGGTGGTTCATGGACCGAGCGCCCAGCTTCTCAGTGCTGCCCCTGAGGGTGTGCCCTTGGCCCAGCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032108.12 ENSMUST00000125894.9 ENSMUST00000153148.8 |
||
| CDS CCA 72 bp | GGGGGACTCACTCCAGCACCCTCTTTAACGTGGAGCTaGCGCTGGGCCAAGGGCACACCCTCAGGGGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GGLTPAPSLTWS*RWAKGTPSGAA Trigger: TGCTGCCCCTGAGGGTGTGCCCTTGGCCCAGCGCCAGCTCCACGTTAAAGAGGGTGCTGGAGTGAGTCCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032108.12 ENSMUST00000125894.9 ENSMUST00000153148.8 |
||
| CDS CCA 72 bp | TCCAGGGCAGAGATGGTCCGGGCGTGGGCACTGATCTaGACGTGGAGGGCCCCTGTGCTGGCATCATACAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRAEMVRAWALI*TWRAPVLASYR Trigger: CCTGTATGATGCCAGCACAGGGGCCCTCCACGTCCAGATCAGTGCCCACGCCCGGACCATCTCTGCCCTGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125894.9 ENSMUST00000153148.8 |
||
| CDS CCA 72 bp | ATAAGTGGGGGACTCACTCCAGCACCCTCTTTAACGTaGAGCTGGCGCTGGGCCAAGGGCACACCCTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ISGGLTPAPSLT*SWRWAKGTPSG Trigger: CCCTGAGGGTGTGCCCTTGGCCCAGCGCCAGCTCCACGTTAAAGAGGGTGCTGGAGTGAGTCCCCCACTTAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032108.12 ENSMUST00000125894.9 ENSMUST00000153148.8 |
||
| CDS CAA 72 bp | GTGAGATCACGGGCTGGCAGCTGCAGTACACTGAGGTaGTTAGACAGGGCGGCGGCAGAGCTACGAAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VRSRAGSCSTLR*LDRAAAELRSG Trigger: CCCACTTCGTAGCTCTGCCGCCGCCCTGTCTAACAACCTCAGTGTACTGCAGCTGCCAGCCCGTGATCTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032108.12 ENSMUST00000125894.9 ENSMUST00000153148.8 |
||
| CDS CAA 90 bp | CCAAAATGCGTGAGATCACGGGCTGGCAGCTGCAGTACACTGAGGTaGTTAGACAGGGCGGCGGCAGAGCTACGAAGTGGGATGGAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: PKCVRSRAGSCSTLR*LDRAAAELRSGMER Trigger: GCGCTCCATCCCACTTCGTAGCTCTGCCGCCGCCCTGTCTAACAACCTCAGTGTACTGCAGCTGCCAGCCCGTGATCTCACGCATTTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032108.12 ENSMUST00000125894.9 ENSMUST00000153148.8 |
||
| CDS GCA 72 bp | ACCACCCCAAAATGCGTGAGATCACGGGCTGGCAGCTaGAGTACACTGAGGTTGTTAGACAGGGCGGCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: TTPKCVRSRAGS*STLRLLDRAAA Trigger: TGCCGCCGCCCTGTCTAACAACCTCAGTGTACTGCAGCTGCCAGCCCGTGATCTCACGCATTTTGGGGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032108.12 ENSMUST00000125894.9 ENSMUST00000153148.8 |
||
| CDS GCA 72 bp | ACGGAGCCATCAGACTCATACATCTGTATCCCTCGATaGGAGGTGAGGACCAGCAGTACTCTGAAGGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TEPSDSYICIPR*EVRTSSTLKGR Trigger: CCTCCCCTTCAGAGTACTGCTGGTCCTCACCTCGCATCGAGGGATACAGATGTATGAGTCTGATGGCTCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125894.9 ENSMUST00000153148.8 |
||
| CDS CCA 72 bp | TCCATGAACCACCCCAAAATGCGTGAGATCACGGGCTaGCAGCTGCAGTACACTGAGGTTGTTAGACAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SMNHPKMREITG*QLQYTEVVRQG Trigger: GCCCTGTCTAACAACCTCAGTGTACTGCAGCTGCCAGCCCGTGATCTCACGCATTTTGGGGTGGTTCATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032108.12 ENSMUST00000125894.9 ENSMUST00000153148.8 |
||
| CDS CCA 72 bp | CAGGTCATAACCTGTCACAGCAAAGGAGCTGCCCAATaGATCACAGAACCGAGCACCACACACCTGGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: QVITCHSKGAAQ*ITEPSTTHLGV Trigger: GACACCCAGGTGTGTGGTGCTCGGTTCTGTGATCCATTGGGCAGCTCCTTTGCTGTGACAGGTTATGACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125894.9 ENSMUST00000153148.8 |
||
| CDS GCA 72 bp | TCTCAGCCAGGTCATAACCTGTCACAGCAAAGGAGCTaGCCAATGGATCACAGAACCGAGCACCACACACCT | + |
|
Preference number: 6 (lower is better) Translates to: SQPGHNLSQQRS*PMDHRTEHHTP Trigger: AGGTGTGTGGTGCTCGGTTCTGTGATCCATTGGGCAGCTCCTTTGCTGTGACAGGTTATGACCTGGCTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125894.9 ENSMUST00000153148.8 |
||
| CDS CCA 72 bp | CTGCCCAATGGATCACAGAACCGAGCACCACACACCTaGGTGTCAGAAATACATTCACCATGGCAGTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LPNGSQNRAPHT*VSEIHSPWQCS Trigger: GGAACACTGCCATGGTGAATGTATTTCTGACACCCAGGTGTGTGGTGCTCGGTTCTGTGATCCATTGGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125894.9 ENSMUST00000153148.8 |
||
| CDS CCA 72 bp | GCACCACACACCTGGGTGTCAGAAATACATTCACCATaGCAGTGTTCCACCTCAATAGAGCCACTTTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: APHTWVSEIHSP*QCSTSIEPLSG Trigger: CCCAGAAAGTGGCTCTATTGAGGTGGAACACTGCCATGGTGAATGTATTTCTGACACCCAGGTGTGTGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125894.9 ENSMUST00000153148.8 |
||