Pregenerated sensors for WDR5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026917Ensembl transcript IDs: ENSMUST00000113952.10, ENSMUST00000140396.2
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCAAGCTCCCTCCCTCAGGAGGAGGCCGCACACCAGGCCACAGCTaGAAGGACCTTACTACCCTCCAGAAACCCCAGCAACATGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: SKLPPSGGGRTPGHS*KDLTTLQKPQQHAH Trigger: GTGGGCATGTTGCTGGGGTTTCTGGAGGGTAGTAAGGTCCTTCCAGCTGTGGCCTGGTGTGCGGCCTCCTCCTGAGGGAGGGAGCTTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR CCA 90 bp | TTGGCCACTACCTCTTTCCAGTCCTGGTCACCTGAGGCGGTGACCTaGGGCGGGGGCCAAGGACATAAGAGAGGTTTGGTGGGTTTAGAG | + |
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Preference number: 1 (lower is better) Translates to: LATTSFQSWSPEAVT*GGGQGHKRGLVGLE Trigger: CTCTAAACCCACCAAACCTCTCTTATGTCCTTGGCCCCCGCCCCAGGTCACCGCCTCAGGTGACCAGGACTGGAAAGAGGTAGTGGCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR CCA 90 bp | AAATGCTGTGTAGTCCTGAGCTTGGCCACTACCTCTTTCCAGTCCTaGTCACCTGAGGCGGTGACCTGGGGCGGGGGCCAAGGACATAAG | + |
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Preference number: 1 (lower is better) Translates to: KCCVVLSLATTSFQS*SPEAVTWGGGQGHK Trigger: CTTATGTCCTTGGCCCCCGCCCCAGGTCACCGCCTCAGGTGACCAGGACTGGAAAGAGGTAGTGGCCAAGCTCAGGACTACACAGCATTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR TCA 90 bp | AGAGGCCAAGGCAGGAAGCTGTACCTGCTGGGGCAAGCACCATATTaGACTCCTCCCTCCTGCACAGGTGACCCTGAGCCTCTCACAGAA | + |
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Preference number: 1 (lower is better) Translates to: RGQGRKLYLLGQAPY*TPPSCTGDPEPLTE Trigger: TTCTGTGAGAGGCTCAGGGTCACCTGTGCAGGAGGGAGGAGTTCAATATGGTGCTTGCCCCAGCAGGTACAGCTTCCTGCCTTGGCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR TCA 90 bp | GTCTGCTCCACAGTAGGTCACCCTGGGTTCAGCCAGCAGCAGTTGTaGAAATGCTGTGTAGTCCTGAGCTTGGCCACTACCTCTTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: VCSTVGHPGFSQQQL*KCCVVLSLATTSFQ Trigger: CTGGAAAGAGGTAGTGGCCAAGCTCAGGACTACACAGCATTTTCACAACTGCTGCTGGCTGAACCCAGGGTGACCTACTGTGGAGCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR TCA 90 bp | AGAAACTCATGGAAGCACGCTGGGTACTATTACAGGCAGGAAAATTaGACAAGCAGGCCAGGGCAGGAGGCAGGGAATGGGAGTAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: RNSWKHAGYYYRQEN*TSRPGQEAGNGSRA Trigger: AGCCCTACTCCCATTCCCTGCCTCCTGCCCTGGCCTGCTTGTTCAATTTTCCTGCCTGTAATAGTACCCAGCGTGCTTCCATGAGTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR TCA 90 bp | TCATCTATCCAACAGACGCCAGGGGCCCCAGAGCCCATGTCAGTGTaGCAAGCCACCCTCTTTAACAATGGCTTCTTCGATGTGATAGCC | + |
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Preference number: 1 (lower is better) Translates to: SSIQQTPGAPEPMSV*QATLFNNGFFDVIA Trigger: GGCTATCACATCGAAGAAGCCATTGTTAAAGAGGGTGGCTTGTCACACTGACATGGGCTCTGGGGCCCCTGGCGTCTGTTGGATAGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR CCA 90 bp | GCCAGGAAGGGAGGAGGGCTTTATAAAGCCAGGTGTCAAAGAGCCTaGTCAGAACTCAGGGCCACACCCAGTCCATACCCACCTTTTATT | + |
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Preference number: 1 (lower is better) Translates to: ARKGGGLYKARCQRA*SELRATPSPYPPFI Trigger: AATAAAAGGTGGGTATGGACTGGGTGTGGCCCTGAGTTCTGACCAGGCTCTTTGACACCTGGCTTTATAAAGCCCTCCTCCCTTCCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR CCA 90 bp | AGCCTTGGCAAAGGCAGAGTAGAGCAGCTACTGCCCTGGGTGATGTaGCTTCAATACACATCAGTGTTGGCCTCACAGATGGTTGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: SLGKGRVEQLLPWVM*LQYTSVLASQMVAA Trigger: AGCAGCAACCATCTGTGAGGCCAACACTGATGTGTATTGAAGCCACATCACCCAGGGCAGTAGCTGCTCTACTCTGCCTTTGCCAAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR TCA 90 bp | CACTACATGGTGCCTTTCCAAGACTTCCTTCCACTCTTTCTCATCTaGGGTTCTTCCTCTCCAACACTCAGCACCCACAGCAGCCACTGG | + |
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Preference number: 1 (lower is better) Translates to: HYMVPFQDFLPLFLI*GSSSPTLSTHSSHW Trigger: CCAGTGGCTGCTGTGGGTGCTGAGTGTTGGAGAGGAAGAACCTCAGATGAGAAAGAGTGGAAGGAAGTCTTGGAAAGGCACCATGTAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR GCA 90 bp | AGAATTGGCAAGAAATATCACAGTGGCTATCAAGACTCGGTAGTGTaGACTCCCCTGAGCCGACATCTTCAGATAGGAGGTGCACCAGGC | + |
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Preference number: 1 (lower is better) Translates to: RIGKKYHSGYQDSVV*TPLSRHLQIGGAPG Trigger: GCCTGGTGCACCTCCTATCTGAAGATGTCGGCTCAGGGGAGTGCACACTACCGAGTCTTGATAGCCACTGTGATATTTCTTGCCAATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
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| 3UTR GCA 90 bp | CAGGAGGCAGGGAATGGGAGTAGGGCTGTAGGTCCTGTTCCAGTGTaGACTGGGCAATACAATACCAAAACAACAACCACAGAGAAAAAC | + |
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Preference number: 1 (lower is better) Translates to: QEAGNGSRAVGPVPV*TGQYNTKTTTTEKN Trigger: GTTTTTCTCTGTGGTTGTTGTTTTGGTATTGTATTGCCCAGTGCACACTGGAACAGGACCTACAGCCCTACTCCCATTCCCTGCCTCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR CCA 90 bp | CTGAGCACAGAACAGACCAGGAACTTCCCCAGGCAGAGACAGAATTaGCAAGAAATATCACAGTGGCTATCAAGACTCGGTAGTGTGCAC | + |
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Preference number: 1 (lower is better) Translates to: LSTEQTRNFPRQRQN*QEISQWLSRLGSVH Trigger: GTGCACACTACCGAGTCTTGATAGCCACTGTGATATTTCTTGCCAATTCTGTCTCTGCCTGGGGAAGTTCCTGGTCTGTTCTGTGCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR CCA 90 bp | ACCCTGAGCCTCTCACAGAATAAAGAGGTCCAGAACCTCACTACATaGTGCCTTTCCAAGACTTCCTTCCACTCTTTCTCATCTGAGGTT | + |
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Preference number: 1 (lower is better) Translates to: TLSLSQNKEVQNLTT*CLSKTSFHSFSSEV Trigger: AACCTCAGATGAGAAAGAGTGGAAGGAAGTCTTGGAAAGGCACCATGTAGTGAGGTTCTGGACCTCTTTATTCTGTGAGAGGCTCAGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR GCA 90 bp | CTGAGCCTCTCACAGAATAAAGAGGTCCAGAACCTCACTACATGGTaGCTTTCCAAGACTTCCTTCCACTCTTTCTCATCTGAGGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: LSLSQNKEVQNLTTW*LSKTSFHSFSSEVL Trigger: AAGAACCTCAGATGAGAAAGAGTGGAAGGAAGTCTTGGAAAGGCACCATGTAGTGAGGTTCTGGACCTCTTTATTCTGTGAGAGGCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR CCA 90 bp | CAACTTACAACCTTTCTGTGTTTCCAGAAACTCATGGAAGCACGCTaGGTACTATTACAGGCAGGAAAATTGAACAAGCAGGCCAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: QLTTFLCFQKLMEAR*VLLQAGKLNKQARA Trigger: TGCCCTGGCCTGCTTGTTCAATTTTCCTGCCTGTAATAGTACCCAGCGTGCTTCCATGAGTTTCTGGAAACACAGAAAGGTTGTAAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR CCA 90 bp | GATAGCCCATTTACACACCATCTCCCTCAAGGAAGTGACAATGTATaGGGTTTCTTTTCCAATACCTTTGGATTCTTATTATGCACGATG | + |
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Preference number: 1 (lower is better) Translates to: DSPFTHHLPQGSDNV*GFFSNTFGFLLCTM Trigger: CATCGTGCATAATAAGAATCCAAAGGTATTGGAAAAGAAACCCCATACATTGTCACTTCCTTGAGGGAGATGGTGTGTAAATGGGCTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR-3UTR TCA 90 bp | AAAGGGCTGTCAGGACCACAGCTGGGGACAAGCCTTGGCAAAGGCAGAGTAGAGGGTCACCTGAGGCGGTaGCCTGGGGCGGGGGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: KGLSGPQLGTSLGKGRVEGHLRR*PGAGAK Trigger: CTTGGCCCCCGCCCCAGGTCACCGCCTCAGGTGACC...CTCTACTCTGCCTTTGCCAAGGCTTGTCCCCAGCTGTGGTCCTGACAGCCCTTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR-3UTR GCA 90 bp | GACATGGCAAGCAAGCTCCCTCCCTCAGGAGGAGGCCGCACACCAGGCCACAGCCTCACAGATGGTTGCTaGTGCAACCAGAGCAAACCC | + |
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Preference number: 2 (lower is better) Translates to: DMASKLPPSGGGRTPGHSLTDGC*CNQSKP Trigger: GGGTTTGCTCTGGTTGCAGCAGCAACCATCTGTGAG...GCTGTGGCCTGGTGTGCGGCCTCCTCCTGAGGGAGGGAGCTTGCTTGCCATGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR-3UTR GCA 90 bp | TGCACTCCCCTGAGCCGACATCTTCAGATAGGAGGTGCACCAGGCCTGTCAACCCTGGCCCCATGCCTCTaGCCCACATGTGTTTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: CTPLSRHLQIGGAPGLSTLAPCL*PTCVSC Trigger: GCAAGAAACACATGTGGGGCAGAGGCATGGGGCCAG...GGTTGACAGGCCTGGTGCACCTCCTATCTGAAGATGTCGGCTCAGGGGAGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
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| 3UTR-3UTR CCA 90 bp | TATCCAACAGACGCCAGGGGCCCCAGAGCCCATGTCAGTGTGACAAGCCACCCTGCTGGGGACAAGCCTTaGCAAAGGCAGAGTAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: YPTDARGPRAHVSVTSHPAGDKP*QRQSRA Trigger: TGCTCTACTCTGCCTTTGCCAAGGCTTGTCCCCAGC...AGGGTGGCTTGTCACACTGACATGGGCTCTGGGGCCCCTGGCGTCTGTTGGATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR-3UTR TCA 90 bp | CTCCCTCCCTCAGGAGGAGGCCGCACACCAGGCCACAGCTGGAAGGACCTTACTCCACTCTTTCTCATCTaGGGTTCTTCCTCTCCAACA | + |
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Preference number: 2 (lower is better) Translates to: LPPSGGGRTPGHSWKDLTPLFLI*GSSSPT Trigger: TGTTGGAGAGGAAGAACCTCAGATGAGAAAGAGTGG...AGTAAGGTCCTTCCAGCTGTGGCCTGGTGTGCGGCCTCCTCCTGAGGGAGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR-3UTR GCA 90 bp | CTCCCTCCCTCAGGAGGAGGCCGCACACCAGGCCACAGCTGGAAGGACCTTACTAACCTCACTACATGGTaGCTTTCCAAGACTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LPPSGGGRTPGHSWKDLTNLTTW*LSKTSF Trigger: GAAGGAAGTCTTGGAAAGGCACCATGTAGTGAGGTT...AGTAAGGTCCTTCCAGCTGTGGCCTGGTGTGCGGCCTCCTCCTGAGGGAGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR-3UTR CCA 90 bp | AAAGGGCTGTCAGGACCACAGCTGGGGACAAGCCTTGGCAAAGGCAGAGTAGAGACCCACAGCAGCCACTaGGAAGAAGAGGCACAACAA | + |
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Preference number: 2 (lower is better) Translates to: KGLSGPQLGTSLGKGRVETHSSH*EEEAQQ Trigger: TTGTTGTGCCTCTTCTTCCCAGTGGCTGCTGTGGGT...CTCTACTCTGCCTTTGCCAAGGCTTGTCCCCAGCTGTGGTCCTGACAGCCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGGAGGCAGGGAATGGGAGTAGGGCTGTAGGTCCTGTTCCAGTGTGCACTAAAATTTGTTGCCTCTaGGCACAGAACAGACCAGGA | + |
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Preference number: 2 (lower is better) Translates to: GQEAGNGSRAVGPVPVCTKICCL*AQNRPG Trigger: TCCTGGTCTGTTCTGTGCTCAGAGGCAACAAATTTT...AGTGCACACTGGAACAGGACCTACAGCCCTACTCCCATTCCCTGCCTCCTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR CAA 90 bp | GAGCAGCTACTGCCCTGGGTGATGTGGCTTCAATACACATCAGTGTaGGCCTCACAGATGGTTGCTGCTGCAACCAGAGCAAACCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: EQLLPWVMWLQYTSV*ASQMVAAATRANPE Trigger: TTCTGGGTTTGCTCTGGTTGCAGCAGCAACCATCTGTGAGGCCAACACTGATGTGTATTGAAGCCACATCACCCAGGGCAGTAGCTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR-3UTR TCA 90 bp | ATCAGTGTTGGCCTCACAGATGGTTGCTGCTGCAACCAGAGCAAACCCAGAATCGGGCAAGCACCATATTaGACTCCTCCCTCCTGCACA | + |
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Preference number: 2 (lower is better) Translates to: ISVGLTDGCCCNQSKPRIGQAPY*TPPSCT Trigger: TGTGCAGGAGGGAGGAGTTCAATATGGTGCTTGCCC...GATTCTGGGTTTGCTCTGGTTGCAGCAGCAACCATCTGTGAGGCCAACACTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR-3UTR CCA 90 bp | GTTGCTGCTGCAACCAGAGCAAACCCAGAATCTCCTTTCCACCCATGTCTGTGCAGGTGTCAAAGAGCCTaGTCAGAACTCAGGGCCACA | + |
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Preference number: 2 (lower is better) Translates to: VAAATRANPESPFHPCLCRCQRA*SELRAT Trigger: TGTGGCCCTGAGTTCTGACCAGGCTCTTTGACACCT...GCACAGACATGGGTGGAAAGGAGATTCTGGGTTTGCTCTGGTTGCAGCAGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR-3UTR GCA 90 bp | GCCTCTCACAGAATAAAGAGGTCCAGAACCTCACTACATGGTGCCTTTCCAAGACTGGCCCCATGCCTCTaGCCCACATGTGTTTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: ASHRIKRSRTSLHGAFPRLAPCL*PTCVSC Trigger: GCAAGAAACACATGTGGGGCAGAGGCATGGGGCCAG...TCTTGGAAAGGCACCATGTAGTGAGGTTCTGGACCTCTTTATTCTGTGAGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR-3UTR CCA 90 bp | CATCTCCCTCAAGGAAGTGACAATGTATGGGGTTTCTTTTCCAATACCTTTGGACACAGTAGGTCACCCTaGGTTCAGCCAGCAGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: HLPQGSDNVWGFFSNTFGHSRSP*VQPAAV Trigger: AACTGCTGCTGGCTGAACCCAGGGTGACCTACTGTG...TCCAAAGGTATTGGAAAAGAAACCCCATACATTGTCACTTCCTTGAGGGAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR-3UTR GCA 90 bp | CATCTCCCTCAAGGAAGTGACAATGTATGGGGTTTCTTTTCCAATACCTTTGGATACTCCCAGAACCTCTaGAGTCTGCTCCACAGTAGG | + |
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Preference number: 2 (lower is better) Translates to: HLPQGSDNVWGFFSNTFGYSQNL*SLLHSR Trigger: CCTACTGTGGAGCAGACTGCAGAGGTTCTGGGAGTA...TCCAAAGGTATTGGAAAAGAAACCCCATACATTGTCACTTCCTTGAGGGAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR CAA 90 bp | TCCCTCAAGGAAGTGACAATGTATGGGGTTTCTTTTCCAATACCTTaGGATTCTTATTATGCACGATGGAGGGAGAAAGGGCTGTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: SLKEVTMYGVSFPIP*DSYYARWREKGLSG Trigger: TCCTGACAGCCCTTTCTCCCTCCATCGTGCATAATAAGAATCCAAAGGTATTGGAAAAGAAACCCCATACATTGTCACTTCCTTGAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR-3UTR TCA 90 bp | CACCATCTCCCTCAAGGAAGTGACAATGTATGGGGTTTCTTTTCCAATACCTTTGTCAGTGTTGACCTATaGACTCCAAAAGAACAAAGG | + |
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Preference number: 2 (lower is better) Translates to: HHLPQGSDNVWGFFSNTFVSVDL*TPKEQR Trigger: CCTTTGTTCTTTTGGAGTTCATAGGTCAACACTGAC...AAAGGTATTGGAAAAGAAACCCCATACATTGTCACTTCCTTGAGGGAGATGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR CCA 72 bp | GTAGTCCTGAGCTTGGCCACTACCTCTTTCCAGTCCTaGTCACCTGAGGCGGTGACCTGGGGCGGGGGCCAA | + |
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Preference number: 3 (lower is better) Translates to: VVLSLATTSFQS*SPEAVTWGGGQ Trigger: TTGGCCCCCGCCCCAGGTCACCGCCTCAGGTGACCAGGACTGGAAAGAGGTAGTGGCCAAGCTCAGGACTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR GCA 72 bp | CACCAGGCCTGTCAACCCAGCCTGGCCCCATGCCTCTaGCCCACATGTGTTTCTTGCCAATCCGGGTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: HQACQPSLAPCL*PTCVSCQSGWL Trigger: AAGCCACCCGGATTGGCAAGAAACACATGTGGGGCAGAGGCATGGGGCCAGGCTGGGTTGACAGGCCTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
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| 3UTR TCA 72 bp | CCACTACCTCTTTCCAGTCCTGGTCACCTGAGGCGGTaGCCTGGGGCGGGGGCCAAGGACATAAGAGAGGTT | + |
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Preference number: 3 (lower is better) Translates to: PLPLSSPGHLRR*PGAGAKDIREV Trigger: AACCTCTCTTATGTCCTTGGCCCCCGCCCCAGGTCACCGCCTCAGGTGACCAGGACTGGAAAGAGGTAGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR CCA 72 bp | ACCTCTTTCCAGTCCTGGTCACCTGAGGCGGTGACCTaGGGCGGGGGCCAAGGACATAAGAGAGGTTTGGTG | + |
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Preference number: 3 (lower is better) Translates to: TSFQSWSPEAVT*GGGQGHKRGLV Trigger: CACCAAACCTCTCTTATGTCCTTGGCCCCCGCCCCAGGTCACCGCCTCAGGTGACCAGGACTGGAAAGAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR GCA 72 bp | AGAGCAAACCCAGAATCTCCTTTCCACCCATGTCTGTaGCCAGCAGCCTCCGCCACCCATCTGTACTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: RANPESPFHPCL*PAASATHLYSQ Trigger: CTGGGAGTACAGATGGGTGGCGGAGGCTGCTGGGCACAGACATGGGTGGAAAGGAGATTCTGGGTTTGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR-3UTR CAA 90 bp | ACCTCTGCAGTCTGCTCCACAGTAGGTCACCCTGGGTTCAGCCAGCAGCAGTTGGGACATAAGAGAGGTTaGGTGGGTTTAGAGGCCAAG | + |
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Preference number: 3 (lower is better) Translates to: TSAVCSTVGHPGFSQQQLGHKRG*VGLEAK Trigger: CTTGGCCTCTAAACCCACCAAACCTCTCTTATGTCC...CAACTGCTGCTGGCTGAACCCAGGGTGACCTACTGTGGAGCAGACTGCAGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR TCA 72 bp | TGGAAGCACGCTGGGTACTATTACAGGCAGGAAAATTaGACAAGCAGGCCAGGGCAGGAGGCAGGGAATGGG | + |
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Preference number: 3 (lower is better) Translates to: WKHAGYYYRQEN*TSRPGQEAGNG Trigger: CCCATTCCCTGCCTCCTGCCCTGGCCTGCTTGTTCAATTTTCCTGCCTGTAATAGTACCCAGCGTGCTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR GCA 72 bp | TTGGTGGGTTTAGAGGCCAAGGCAGGAAGCTGTACCTaGTGGGGCAAGCACCATATTGAACTCCTCCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: LVGLEAKAGSCT*WGKHHIELLPP Trigger: AGGAGGGAGGAGTTCAATATGGTGCTTGCCCCAGCAGGTACAGCTTCCTGCCTTGGCCTCTAAACCCACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR-3UTR CAA 90 bp | TTCATCTATCCAACAGACGCCAGGGGCCCCAGAGCCCATGTCAGTGTGACAAGCTTACAGGCAGGAAAATaGAACAAGCAGGCCAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: FIYPTDARGPRAHVSVTSLQAGK*NKQARA Trigger: TGCCCTGGCCTGCTTGTTCAATTTTCCTGCCTGTAA...GCTTGTCACACTGACATGGGCTCTGGGGCCCCTGGCGTCTGTTGGATAGATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR TCA 72 bp | ACAGTAGGTCACCCTGGGTTCAGCCAGCAGCAGTTGTaGAAATGCTGTGTAGTCCTGAGCTTGGCCACTACC | + |
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Preference number: 3 (lower is better) Translates to: TVGHPGFSQQQL*KCCVVLSLATT Trigger: GGTAGTGGCCAAGCTCAGGACTACACAGCATTTTCACAACTGCTGCTGGCTGAACCCAGGGTGACCTACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR CCA 72 bp | CAGAACCTCTGCAGTCTGCTCCACAGTAGGTCACCCTaGGTTCAGCCAGCAGCAGTTGTGAAAATGCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: QNLCSLLHSRSP*VQPAAVVKMLC Trigger: ACACAGCATTTTCACAACTGCTGCTGGCTGAACCCAGGGTGACCTACTGTGGAGCAGACTGCAGAGGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR CCA 72 bp | AGCCTTGGCAAAGGCAGAGTAGAGCAGCTACTGCCCTaGGTGATGTGGCTTCAATACACATCAGTGTTGGCC | + |
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Preference number: 3 (lower is better) Translates to: SLGKGRVEQLLP*VMWLQYTSVLA Trigger: GGCCAACACTGATGTGTATTGAAGCCACATCACCCAGGGCAGTAGCTGCTCTACTCTGCCTTTGCCAAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR TCA 72 bp | GTGCCTTTCCAAGACTTCCTTCCACTCTTTCTCATCTaGGGTTCTTCCTCTCCAACACTCAGCACCCACAGC | + |
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Preference number: 3 (lower is better) Translates to: VPFQDFLPLFLI*GSSSPTLSTHS Trigger: GCTGTGGGTGCTGAGTGTTGGAGAGGAAGAACCTCAGATGAGAAAGAGTGGAAGGAAGTCTTGGAAAGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR GCA 72 bp | ATACACATCAGTGTTGGCCTCACAGATGGTTGCTGCTaGAACCAGAGCAAACCCAGAATCTCCTTTCCACCC | + |
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Preference number: 3 (lower is better) Translates to: IHISVGLTDGCC*NQSKPRISFPP Trigger: GGGTGGAAAGGAGATTCTGGGTTTGCTCTGGTTGCAGCAGCAACCATCTGTGAGGCCAACACTGATGTGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| 3UTR CCA 72 bp | AAAGGCAGAGTAGAGCAGCTACTGCCCTGGGTGATGTaGCTTCAATACACATCAGTGTTGGCCTCACAGATG | + |
|
Preference number: 3 (lower is better) Translates to: KGRVEQLLPWVM*LQYTSVLASQM Trigger: CATCTGTGAGGCCAACACTGATGTGTATTGAAGCCACATCACCCAGGGCAGTAGCTGCTCTACTCTGCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| 3UTR GCA 72 bp | GGGAATGGGAGTAGGGCTGTAGGTCCTGTTCCAGTGTaGACTGGGCAATACAATACCAAAACAACAACCACA | + |
|
Preference number: 3 (lower is better) Translates to: GNGSRAVGPVPV*TGQYNTKTTTT Trigger: TGTGGTTGTTGTTTTGGTATTGTATTGCCCAGTGCACACTGGAACAGGACCTACAGCCCTACTCCCATTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| 3UTR CCA 72 bp | TGTGGCTTCAATACACATCAGTGTTGGCCTCACAGATaGTTGCTGCTGCAACCAGAGCAAACCCAGAATCTC | + |
|
Preference number: 3 (lower is better) Translates to: CGFNTHQCWPHR*LLLQPEQTQNL Trigger: GAGATTCTGGGTTTGCTCTGGTTGCAGCAGCAACCATCTGTGAGGCCAACACTGATGTGTATTGAAGCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| 3UTR GCA 72 bp | TCAATACACATCAGTGTTGGCCTCACAGATGGTTGCTaGTGCAACCAGAGCAAACCCAGAATCTCCTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SIHISVGLTDGC*CNQSKPRISFP Trigger: TGGAAAGGAGATTCTGGGTTTGCTCTGGTTGCAGCAGCAACCATCTGTGAGGCCAACACTGATGTGTATTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| 3UTR GCA 72 bp | GCTTCAATACACATCAGTGTTGGCCTCACAGATGGTTaGTGCTGCAACCAGAGCAAACCCAGAATCTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: ASIHISVGLTDG*CCNQSKPRISF Trigger: AAAGGAGATTCTGGGTTTGCTCTGGTTGCAGCAGCAACCATCTGTGAGGCCAACACTGATGTGTATTGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| 3UTR CCA 72 bp | CTCTCACAGAATAAAGAGGTCCAGAACCTCACTACATaGTGCCTTTCCAAGACTTCCTTCCACTCTTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LSQNKEVQNLTT*CLSKTSFHSFS Trigger: TGAGAAAGAGTGGAAGGAAGTCTTGGAAAGGCACCATGTAGTGAGGTTCTGGACCTCTTTATTCTGTGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| 3UTR GCA 72 bp | TCACAGAATAAAGAGGTCCAGAACCTCACTACATGGTaGCTTTCCAAGACTTCCTTCCACTCTTTCTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: SQNKEVQNLTTW*LSKTSFHSFSS Trigger: AGATGAGAAAGAGTGGAAGGAAGTCTTGGAAAGGCACCATGTAGTGAGGTTCTGGACCTCTTTATTCTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| 3UTR CCA 72 bp | ACCTTTCTGTGTTTCCAGAAACTCATGGAAGCACGCTaGGTACTATTACAGGCAGGAAAATTGAACAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TFLCFQKLMEAR*VLLQAGKLNKQ Trigger: CTGCTTGTTCAATTTTCCTGCCTGTAATAGTACCCAGCGTGCTTCCATGAGTTTCTGGAAACACAGAAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| 3UTR TCA 72 bp | GTGTTGACCTATGAACTCCAAAAGAACAAAGGGACTTaGCACGGATACAACTTACAACCTTTCTGTGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VLTYELQKNKGT*HGYNLQPFCVS Trigger: GGAAACACAGAAAGGTTGTAAGTTGTATCCGTGTCAAGTCCCTTTGTTCTTTTGGAGTTCATAGGTCAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| 3UTR CCA 72 bp | TACAACTTACAACCTTTCTGTGTTTCCAGAAACTCATaGAAGCACGCTGGGTACTATTACAGGCAGGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: YNLQPFCVSRNS*KHAGYYYRQEN Trigger: ATTTTCCTGCCTGTAATAGTACCCAGCGTGCTTCCATGAGTTTCTGGAAACACAGAAAGGTTGTAAGTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| 3UTR CCA 72 bp | TTTACACACCATCTCCCTCAAGGAAGTGACAATGTATaGGGTTTCTTTTCCAATACCTTTGGATTCTTATTA | + |
|
Preference number: 3 (lower is better) Translates to: FTHHLPQGSDNV*GFFSNTFGFLL Trigger: TAATAAGAATCCAAAGGTATTGGAAAAGAAACCCCATACATTGTCACTTCCTTGAGGGAGATGGTGTGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| CDS-3UTR GCA 90 bp | CAAGCAAGCTCCCTCCCTCAGGAGGAGGCCGCACACCAGGCCACAGCTGGAAGGGGAAGGAGTGGGCTGTaGTCTTGCAGCCTCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QASSLPQEEAAHQATAGRGRSGL*SCSLCL Trigger: GAGACAGAGGCTGCAAGAGCACAGCCCACTCCTTCC...CCTTCCAGCTGTGGCCTGGTGTGCGGCCTCCTCCTGAGGGAGGGAGCTTGCTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| CDS-3UTR TCA 90 bp | GGATACTGTGCTCGACATGGCAAGCAAGCTCCCTCCCTCAGGAGGAGGCCGCACACGCTGCTGAGGCAATaGTGTTCTCTGTCGGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GYCARHGKQAPSLRRRPHTLLRQ*CSLSGD Trigger: GTCACCCGACAGAGAACATCATTGCCTCAGCAGCGT...GTGCGGCCTCCTCCTGAGGGAGGGAGCTTGCTTGCCATGTCGAGCACAGTATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| CDS-3UTR CCA 90 bp | GGTAGTGTGCACTCCCCTGAGCCGACATCTTCAGATAGGAGGTGCACCAGGCCTAGTGTCTTCAGACACTaGCCAGAGGCGGTGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSVHSPEPTSSDRRCTRPSVFRH*PEAVSQ Trigger: CTGGGACACCGCCTCTGGCCAGTGTCTGAAGACACT...AGGCCTGGTGCACCTCCTATCTGAAGATGTCGGCTCAGGGGAGTGCACACTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
||
| CDS-3UTR TCA 90 bp | GGTAGTGTGCACTCCCCTGAGCCGACATCTTCAGATAGGAGGTGCACCAGGCCTTGTGGCCAGCCAGGGTaGACTTCAGGGCATAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSVHSPEPTSSDRRCTRPCGQPG*TSGHSL Trigger: CAAACTATGCCCTGAAGTTCACCCTGGCTGGCCACA...AGGCCTGGTGCACCTCCTATCTGAAGATGTCGGCTCAGGGGAGTGCACACTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| CDS-3UTR TCA 90 bp | CTCGGTAGTGTGCACTCCCCTGAGCCGACATCTTCAGATAGGAGGTGCACCAGGGGTTGGACTGGGGGTTaGAGTTGCAGCAGAAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: LGSVHSPEPTSSDRRCTRGWTGG*SCSRRR Trigger: ACGTCTTCTGCTGCAACTTCAACCCCCAGTCCAACC...CCTGGTGCACCTCCTATCTGAAGATGTCGGCTCAGGGGAGTGCACACTACCGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
||
| CDS-3UTR TCA 90 bp | GTAGTGTGCACTCCCCTGAGCCGACATCTTCAGATAGGAGGTGCACCAGGCCTGACGCTGCTGAGGCAATaGTGTTCTCTGTCGGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VVCTPLSRHLQIGGAPGLTLLRQ*CSLSGD Trigger: GTCACCCGACAGAGAACATCATTGCCTCAGCAGCGT...CAGGCCTGGTGCACCTCCTATCTGAAGATGTCGGCTCAGGGGAGTGCACACTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGCCGACATCTTCAGATAGGAGGTGCACCAGGCCTGTCAACCCAGCCTGGCACGATGAGGTTGGACTaGGGGTTGAAGTTGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSRHLQIGGAPGLSTQPGTMRLD*GLKLQQ Trigger: CTGCTGCAACTTCAACCCCCAGTCCAACCTCATCGT...GCCAGGCTGGGTTGACAGGCCTGGTGCACCTCCTATCTGAAGATGTCGGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
||
| CDS-3UTR TCA 90 bp | TGCACTCCCCTGAGCCGACATCTTCAGATAGGAGGTGCACCAGGCCTGTCAACCGGGCTCCGTTTCTCGTaGCTGGTCACAAACACAATG | + |
|
Preference number: 4 (lower is better) Translates to: CTPLSRHLQIGGAPGLSTGLRFS*LVTNTM Trigger: CATTGTGTTTGTGACCAGTCACGAGAAACGGAGCCC...GGTTGACAGGCCTGGTGCACCTCCTATCTGAAGATGTCGGCTCAGGGGAGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140396.2 |
||
| CDS-3UTR CCA 90 bp | CTCGGTAGTGTGCACTCCCCTGAGCCGACATCTTCAGATAGGAGGTGCACCAGGACGATGAGGTTGGACTaGGGGTTGAAGTTGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGSVHSPEPTSSDRRCTRTMRLD*GLKLQQ Trigger: CTGCTGCAACTTCAACCCCCAGTCCAACCTCATCGT...CCTGGTGCACCTCCTATCTGAAGATGTCGGCTCAGGGGAGTGCACACTACCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
||
| CDS-3UTR CCA 90 bp | CTTATTATGCACGATGGAGGGAGAAAGGGCTGTCAGGACCACAGCTGGGGACAAAGTGTCTTCAGACACTaGCCAGAGGCGGTGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LIMHDGGRKGCQDHSWGQSVFRH*PEAVSQ Trigger: CTGGGACACCGCCTCTGGCCAGTGTCTGAAGACACT...TTGTCCCCAGCTGTGGTCCTGACAGCCCTTTCTCCCTCCATCGTGCATAATAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| CDS-3UTR TCA 90 bp | CACATGTGTTTCTTGCCAATCCGGGTGGCTTCCTTAAGTCTCCCATGGAGCCAGGGGCAGGCAAAGTCTTaGGGCACTTCCCTGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HMCFLPIRVASLSLPWSQGQAKS*GTSLSS Trigger: TGAAGACAGGGAAGTGCCTCAAGACTTTGCCTGCCC...CTGGCTCCATGGGAGACTTAAGGAAGCCACCCGGATTGGCAAGAAACACATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
||
| CDS-3UTR TCA 90 bp | CACATGTGTTTCTTGCCAATCCGGGTGGCTTCCTTAAGTCTCCCATGGAGCCAGCCATCACGGTTGAAATaGACGGCTGAGACTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HMCFLPIRVASLSLPWSQPSRLK*TAETGS Trigger: GGACCCAGTCTCAGCCGTTCATTTCAACCGTGATGG...CTGGCTCCATGGGAGACTTAAGGAAGCCACCCGGATTGGCAAGAAACACATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
||
| CDS-3UTR TCA 90 bp | TGCACTCCCCTGAGCCGACATCTTCAGATAGGAGGTGCACCAGGCCTGTCAACCTGGTCACAAACACAATaGGTGTCTTCAGACACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CTPLSRHLQIGGAPGLSTWSQTQ*VSSDTG Trigger: GCCAGTGTCTGAAGACACTCATTGTGTTTGTGACCA...GGTTGACAGGCCTGGTGCACCTCCTATCTGAAGATGTCGGCTCAGGGGAGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140396.2 |
||
| 3UTR CAA 72 bp | CTGCCCTGGGTGATGTGGCTTCAATACACATCAGTGTaGGCCTCACAGATGGTTGCTGCTGCAACCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPWVMWLQYTSV*ASQMVAAATRA Trigger: TGCTCTGGTTGCAGCAGCAACCATCTGTGAGGCCAACACTGATGTGTATTGAAGCCACATCACCCAGGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| CDS-3UTR TCA 90 bp | TGCACTCCCCTGAGCCGACATCTTCAGATAGGAGGTGCACCAGGCCTGTCAACCGATTGTCATCATCAATaGGTGTCTTCAGACACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CTPLSRHLQIGGAPGLSTDCHHQ*VSSDTG Trigger: GCCAGTGTCTGAAGACACTCATTGATGATGACAATC...GGTTGACAGGCCTGGTGCACCTCCTATCTGAAGATGTCGGCTCAGGGGAGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| CDS-3UTR GCA 90 bp | CTGAGCCGACATCTTCAGATAGGAGGTGCACCAGGCCTGTCAACCCAGCCTGGCCAGCCAGGATGTATTTaGCATTTGGAGAGAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSRHLQIGGAPGLSTQPGQPGCI*HLERTS Trigger: TGAAGTTCTCTCCAAATGGCAAATACATCCTGGCTG...GCCAGGCTGGGTTGACAGGCCTGGTGCACCTCCTATCTGAAGATGTCGGCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAGGGAGGAGGGCTTTATAAAGCCAGGTGTCAAAGAGCCTGGTCAGAACTCTGGGCTTGCTCTGTGTaGCTGATGAGGAAGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKGGGLYKARCQRAWSELWACSV*LMRKEW Trigger: CCACTCCTTCCTCATCAGCCACACAGAGCAAGCCCA...GAGTTCTGACCAGGCTCTTTGACACCTGGCTTTATAAAGCCCTCCTCCCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| CDS-3UTR TCA 90 bp | GGTAGTGTGCACTCCCCTGAGCCGACATCTTCAGATAGGAGGTGCACCAGGCCTGATATTCCCAGTTTGTaGCCAGATATAGTTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSVHSPEPTSSDRRCTRPDIPSL*PDIVFS Trigger: TGAGAAAACTATATCTGGTCACAAACTGGGAATATC...AGGCCTGGTGCACCTCCTATCTGAAGATGTCGGCTCAGGGGAGTGCACACTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
||
| CDS-3UTR GCA 90 bp | CATGTGTTTCTTGCCAATCCGGGTGGCTTCCTTAAGTCTCCCATGGAGCCAGGATGTGTTGTCCAAAGTTaGAGCCAGGATGTATTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HVFLANPGGFLKSPMEPGCVVQS*SQDVFA Trigger: GGCAAATACATCCTGGCTGCAACTTTGGACAACACA...TCCTGGCTCCATGGGAGACTTAAGGAAGCCACCCGGATTGGCAAGAAACACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
||
| CDS-3UTR TCA 90 bp | TTCATCTATCCAACAGACGCCAGGGGCCCCAGAGCCCATGTCAGTGTGACAAGCGATATTCCCAGTTTGTaGCCAGATATAGTTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FIYPTDARGPRAHVSVTSDIPSL*PDIVFS Trigger: TGAGAAAACTATATCTGGTCACAAACTGGGAATATC...GCTTGTCACACTGACATGGGCTCTGGGGCCCCTGGCGTCTGTTGGATAGATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| CDS-3UTR TCA 90 bp | CATCTCCCTCAAGGAAGTGACAATGTATGGGGTTTCTTTTCCAATACCTTTGGACCATCACGGTTGAAATaGACGGCTGAGACTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLPQGSDNVWGFFSNTFGPSRLK*TAETGS Trigger: GGACCCAGTCTCAGCCGTTCATTTCAACCGTGATGG...TCCAAAGGTATTGGAAAAGAAACCCCATACATTGTCACTTCCTTGAGGGAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| CDS-3UTR CCA 90 bp | CACATGTGTTTCTTGCCAATCCGGGTGGCTTCCTTAAGTCTCCCATGGAGCCAGGATGTATTTGCCATTTaGAGAGAACTTCACGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HMCFLPIRVASLSLPWSQDVFAI*RELHEG Trigger: TCCTTCGTGAAGTTCTCTCCAAATGGCAAATACATC...CTGGCTCCATGGGAGACTTAAGGAAGCCACCCGGATTGGCAAGAAACACATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
||
| CDS-3UTR GCA 90 bp | TTCTGTGTTTCCAGAAACTCATGGAAGCACGCTGGGTACTATTACAGGCAGGAACAGCCAGGATGTATTTaGCATTTGGAGAGAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FCVSRNSWKHAGYYYRQEQPGCI*HLERTS Trigger: TGAAGTTCTCTCCAAATGGCAAATACATCCTGGCTG...TTCCTGCCTGTAATAGTACCCAGCGTGCTTCCATGAGTTTCTGGAAACACAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| CDS-3UTR GCA 90 bp | GGAGACATTTCAACCACTGAGAGGTCAGTGTTGACCTATGAACTCCAAAAGAACTGTGTTGTCCAAAGTTaGAGCCAGGATGTATTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GDISTTERSVLTYELQKNCVVQS*SQDVFA Trigger: GGCAAATACATCCTGGCTGCAACTTTGGACAACACA...GTTCTTTTGGAGTTCATAGGTCAACACTGACCTCTCAGTGGTTGAAATGTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| CDS-3UTR CCA 90 bp | TTCTGTGTTTCCAGAAACTCATGGAAGCACGCTGGGTACTATTACAGGCAGGAAGATGTATTTGCCATTTaGAGAGAACTTCACGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FCVSRNSWKHAGYYYRQEDVFAI*RELHEG Trigger: TCCTTCGTGAAGTTCTCTCCAAATGGCAAATACATC...TTCCTGCCTGTAATAGTACCCAGCGTGCTTCCATGAGTTTCTGGAAACACAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| 3UTR CAA 72 bp | GAAGTGACAATGTATGGGGTTTCTTTTCCAATACCTTaGGATTCTTATTATGCACGATGGAGGGAGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EVTMYGVSFPIP*DSYYARWREKG Trigger: CCCTTTCTCCCTCCATCGTGCATAATAAGAATCCAAAGGTATTGGAAAAGAAACCCCATACATTGTCACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| CDS-3UTR CAA 90 bp | GGATACTGTGCTCGACATGGCAAGCAAGCTCCCTCCCTCAGGAGGAGGCCGCACAGGTTGGACTGGGGGTaGAAGTTGCAGCAGAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: GYCARHGKQAPSLRRRPHRLDWG*KLQQKT Trigger: CGTCTTCTGCTGCAACTTCAACCCCCAGTCCAACCT...GTGCGGCCTCCTCCTGAGGGAGGGAGCTTGCTTGCCATGTCGAGCACAGTATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| CDS-3UTR CAA 90 bp | GAGCCGACATCTTCAGATAGGAGGTGCACCAGGCCTGTCAACCCAGCCTGGCCCAGGTTGGACTGGGGGTaGAAGTTGCAGCAGAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: EPTSSDRRCTRPVNPAWPRLDWG*KLQQKT Trigger: CGTCTTCTGCTGCAACTTCAACCCCCAGTCCAACCT...GGGCCAGGCTGGGTTGACAGGCCTGGTGCACCTCCTATCTGAAGATGTCGGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
||
| CDS-3UTR CAA 90 bp | GACATGGCAAGCAAGCTCCCTCCCTCAGGAGGAGGCCGCACACCAGGCCACAGCGGATGTATTTGCCATTaGGAGAGAACTTCACGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: DMASKLPPSGGGRTPGHSGCICH*ERTSRR Trigger: CCTTCGTGAAGTTCTCTCCAAATGGCAAATACATCC...GCTGTGGCCTGGTGTGCGGCCTCCTCCTGAGGGAGGGAGCTTGCTTGCCATGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| CDS-3UTR CAA 90 bp | CTCGGTAGTGTGCACTCCCCTGAGCCGACATCTTCAGATAGGAGGTGCACCAGGCAGAGCTTCAGTGTGTaGTCCAAAGTTGCAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGSVHSPEPTSSDRRCTRQSFSV*SKVAAR Trigger: CCTGGCTGCAACTTTGGACAACACACTGAAGCTCTG...CCTGGTGCACCTCCTATCTGAAGATGTCGGCTCAGGGGAGTGCACACTACCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
||
| CDS-3UTR CAA 90 bp | TATCCAACAGACGCCAGGGGCCCCAGAGCCCATGTCAGTGTGACAAGCCACCCTGCAGCCAGGATGTATTaGCCATTTGGAGAGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: YPTDARGPRAHVSVTSHPAARMY*PFGENF Trigger: GAAGTTCTCTCCAAATGGCAAATACATCCTGGCTGC...AGGGTGGCTTGTCACACTGACATGGGCTCTGGGGCCCCTGGCGTCTGTTGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| CDS-3UTR CAA 90 bp | CTCGGTAGTGTGCACTCCCCTGAGCCGACATCTTCAGATAGGAGGTGCACCAGGAAGGACACTGGAGGATaGTCATCATCACAGGGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LGSVHSPEPTSSDRRCTRKDTGG*SSSQGV Trigger: AACCCCCTGTGATGATGACAATCCTCCAGTGTCCTT...CCTGGTGCACCTCCTATCTGAAGATGTCGGCTCAGGGGAGTGCACACTACCGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140396.2 |
||
| CDS-3UTR CAA 90 bp | CTCGGTAGTGTGCACTCCCCTGAGCCGACATCTTCAGATAGGAGGTGCACCAGGGCAGCCAGGATGTATTaGCCATTTGGAGAGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LGSVHSPEPTSSDRRCTRAARMY*PFGENF Trigger: GAAGTTCTCTCCAAATGGCAAATACATCCTGGCTGC...CCTGGTGCACCTCCTATCTGAAGATGTCGGCTCAGGGGAGTGCACACTACCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
||
| CDS-3UTR CAA 90 bp | AGTGTTGGCCTCACAGATGGTTGCTGCTGCAACCAGAGCAAACCCAGAATCTCCCAGAGCTTCAGTGTGTaGTCCAAAGTTGCAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SVGLTDGCCCNQSKPRISQSFSV*SKVAAR Trigger: CCTGGCTGCAACTTTGGACAACACACTGAAGCTCTG...GGAGATTCTGGGTTTGCTCTGGTTGCAGCAGCAACCATCTGTGAGGCCAACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
||
| CDS-3UTR CAA 90 bp | CTCGGTAGTGTGCACTCCCCTGAGCCGACATCTTCAGATAGGAGGTGCACCAGGTTCTGCACAATCTCCTaGGTCTGCAGATTCCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: LGSVHSPEPTSSDRRCTRFCTIS*VCRFQI Trigger: TATCTGGAATCTGCAGACCAAGGAGATTGTGCAGAA...CCTGGTGCACCTCCTATCTGAAGATGTCGGCTCAGGGGAGTGCACACTACCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
||
| CDS-3UTR CAA 90 bp | GTAGTGTGCACTCCCCTGAGCCGACATCTTCAGATAGGAGGTGCACCAGGCCTGCACAGTTTGATTGTTTaGTCGTTCTCTAACGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VVCTPLSRHLQIGGAPGLHSLIV*SFSNAA Trigger: AGCAGCGTTAGAGAACGACAAAACAATCAAACTGTG...CAGGCCTGGTGCACCTCCTATCTGAAGATGTCGGCTCAGGGGAGTGCACACTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
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| CDS-3UTR CAA 90 bp | GCCCCACATGTGTTTCTTGCCAATCCGGGTGGCTTCCTTAAGTCTCCCATGGAGGGATGTATTTGCCATTaGGAGAGAACTTCACGAAGG | + |
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Preference number: 5 (lower is better) Translates to: APHVFLANPGGFLKSPMEGCICH*ERTSRR Trigger: CCTTCGTGAAGTTCTCTCCAAATGGCAAATACATCC...CTCCATGGGAGACTTAAGGAAGCCACCCGGATTGGCAAGAAACACATGTGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
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| CDS-3UTR CAA 90 bp | GCCCCACATGTGTTTCTTGCCAATCCGGGTGGCTTCCTTAAGTCTCCCATGGAGTTCTGCACAATCTCCTaGGTCTGCAGATTCCAGATA | + |
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Preference number: 5 (lower is better) Translates to: APHVFLANPGGFLKSPMEFCTIS*VCRFQI Trigger: TATCTGGAATCTGCAGACCAAGGAGATTGTGCAGAA...CTCCATGGGAGACTTAAGGAAGCCACCCGGATTGGCAAGAAACACATGTGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
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| CDS-3UTR CAA 90 bp | TTCTGTGTTTCCAGAAACTCATGGAAGCACGCTGGGTACTATTACAGGCAGGAATTAACTGGTGTGGGCTaGCTCTGTGTGGCTGATGAG | + |
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Preference number: 5 (lower is better) Translates to: FCVSRNSWKHAGYYYRQELTGVG*LCVADE Trigger: CTCATCAGCCACACAGAGCAAGCCCACACCAGTTAA...TTCCTGCCTGTAATAGTACCCAGCGTGCTTCCATGAGTTTCTGGAAACACAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| CDS-3UTR CAA 90 bp | CACATGTGTTTCTTGCCAATCCGGGTGGCTTCCTTAAGTCTCCCATGGAGCCAGCACAGTTTGATTGTTTaGTCGTTCTCTAACGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: HMCFLPIRVASLSLPWSQHSLIV*SFSNAA Trigger: AGCAGCGTTAGAGAACGACAAAACAATCAAACTGTG...CTGGCTCCATGGGAGACTTAAGGAAGCCACCCGGATTGGCAAGAAACACATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
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| CDS-3UTR CAA 90 bp | ACAATGTATGGGGTTTCTTTTCCAATACCTTTGGATTCTTATTATGCACGATGGGCCAACCATTCCCCATaGGGGCTGAACTTCACAGAG | + |
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Preference number: 5 (lower is better) Translates to: TMYGVSFPIPLDSYYARWANHSP*GLNFTE Trigger: CTCTGTGAAGTTCAGCCCCAATGGGGAATGGTTGGC...CCATCGTGCATAATAAGAATCCAAAGGTATTGGAAAAGAAACCCCATACATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| CDS-3UTR CAA 90 bp | TGGGGTTTCTTTTCCAATACCTTTGGATTCTTATTATGCACGATGGAGGGAGAATATCAGCAGATGAACTaGCCAACCATTCCCCATTGG | + |
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Preference number: 5 (lower is better) Translates to: WGFFSNTFGFLLCTMEGEYQQMN*PTIPHW Trigger: CCAATGGGGAATGGTTGGCAAGTTCATCTGCTGATA...TTCTCCCTCCATCGTGCATAATAAGAATCCAAAGGTATTGGAAAAGAAACCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113952.10 |
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| CDS TCA 72 bp | GGGGGCTCCGTTTCTCGTGACTGGTCACAAACACAATaGGTGTCTTCAGACACTGGCCAGAGGCGGTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: GGSVSRDWSQTQ*VSSDTGQRRCP Trigger: GGGACACCGCCTCTGGCCAGTGTCTGAAGACACTCATTGTGTTTGTGACCAGTCACGAGAAACGGAGCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140396.2 |
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| CDS TCA 72 bp | CTACTGGAAACAATCAATGATCCATCACGGTTGAAATaGACGGCTGAGACTGGGTCCGAATGGGCAGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: LLETINDPSRLK*TAETGSEWAGK Trigger: TTTGCCTGCCCATTCGGACCCAGTCTCAGCCGTTCATTTCAACCGTGATGGATCATTGATTGTTTCCAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
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| CDS TCA 72 bp | CATAGCTACTGGAAACAATCAATGATCCATCACGGTTaGAATGAACGGCTGAGACTGGGTCCGAATGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: HSYWKQSMIHHG*NERLRLGPNGQ Trigger: CTGCCCATTCGGACCCAGTCTCAGCCGTTCATTTCAACCGTGATGGATCATTGATTGTTTCCAGTAGCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113952.10 ENSMUST00000140396.2 |
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