Pregenerated sensors for WDR47 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040389Ensembl transcript IDs: ENSMUST00000051145.15, ENSMUST00000124731.3
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAGGAGTGCACTTAATAACCATGAACCCATCCTGGACCATGACTTaGGATGCAAACCAACAACATAAGAGCTCTTCTGCAGACTTTGGC | + |
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Preference number: 1 (lower is better) Translates to: QGVHLITMNPSWTMT*DANQQHKSSSADFG Trigger: GCCAAAGTCTGCAGAAGAGCTCTTATGTTGTTGGTTTGCATCCCAAGTCATGGTCCAGGATGGGTTCATGGTTATTAAGTGCACTCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| 3UTR CCA 90 bp | CTGGGTAACACCCAAGGAGTGCACTTAATAACCATGAACCCATCCTaGACCATGACTTGGGATGCAAACCAACAACATAAGAGCTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: LGNTQGVHLITMNPS*TMTWDANQQHKSSS Trigger: AGAAGAGCTCTTATGTTGTTGGTTTGCATCCCAAGTCATGGTCCAGGATGGGTTCATGGTTATTAAGTGCACTCCTTGGGTGTTACCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| 3UTR TCA 90 bp | TTAATTTTGAAGAGGAAAATGCTACCTGGTAAGTTAACCTACCATTaGCTATTGTTCCACGTAACAGCTGCCGCTCTGCTTCTACAGTGC | + |
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Preference number: 1 (lower is better) Translates to: LILKRKMLPGKLTYH*LLFHVTAAALLLQC Trigger: GCACTGTAGAAGCAGAGCGGCAGCTGTTACGTGGAACAATAGTCAATGGTAGGTTAACTTACCAGGTAGCATTTTCCTCTTCAAAATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| 3UTR GCA 90 bp | AGTTACACTTCTATTACCTCCCACTTGTGTACTATAGATTTAAAATaGTTGCTACATATAGTGCACAGACAGGTCAATACCACTGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: SYTSITSHLCTIDLK*LLHIVHRQVNTTAA Trigger: AGCTGCAGTGGTATTGACCTGTCTGTGCACTATATGTAGCAAGCATTTTAAATCTATAGTACACAAGTGGGAGGTAATAGAAGTGTAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| 3UTR-3UTR CCA 90 bp | GGAAGAAGCAGCTCTCCTTTCATCTGGAGGCTCTGTGGTGAGCCCTATGCAAAGTCCTGGACCATGACTTaGGATGCAAACCAACAACAT | + |
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Preference number: 2 (lower is better) Translates to: GRSSSPFIWRLCGEPYAKSWTMT*DANQQH Trigger: ATGTTGTTGGTTTGCATCCCAAGTCATGGTCCAGGA...CTTTGCATAGGGCTCACCACAGAGCCTCCAGATGAAAGGAGAGCTGCTTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| 3UTR-3UTR CCA 90 bp | GGGATTCCAGTCCTTAAACTCAGCGTGATTGGTCAAACGAGGCAAGGTGAGGAGGTAAATTCCAAATGCTaGGGCTCATCTTCTGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: GIPVLKLSVIGQTRQGEEVNSKC*GSSSAD Trigger: GTCTGCAGAAGATGAGCCCCAGCATTTGGAATTTAC...CTCCTCACCTTGCCTCGTTTGACCAATCACGCTGAGTTTAAGGACTGGAATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124731.3 |
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| 3UTR-3UTR TCA 90 bp | GTACTCCTCCAGAGCATGCAGACACTGCACCGCTTCCTGCATGGTAAATTCCAAATTCTAGAGGCTGAATaGACTGAAGAACTTCATCCC | + |
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Preference number: 2 (lower is better) Translates to: VLLQSMQTLHRFLHGKFQILEAE*TEELHP Trigger: GGGATGAAGTTCTTCAGTTCATTCAGCCTCTAGAAT...TTGGAATTTACCATGCAGGAAGCGGTGCAGTGTCTGCATGCTCTGGAGGAGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124731.3 |
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| 3UTR-3UTR CCA 90 bp | TATCATGCAAACATAGCTTTTCAAGCCATGCTAGGGTCATGGCAAAGTCTTAATACCATGAACCCATCCTaGACCATGACTTGGGATGCA | + |
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Preference number: 2 (lower is better) Translates to: YHANIAFQAMLGSWQSLNTMNPS*TMTWDA Trigger: TGCATCCCAAGTCATGGTCCAGGATGGGTTCATGGT...ATTAAGACTTTGCCATGACCCTAGCATGGCTTGAAAAGCTATGTTTGCATGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| 3UTR CAA 90 bp | TACACTTCTATTACCTCCCACTTGTGTACTATAGATTTAAAATGCTaGCTACATATAGTGCACAGACAGGTCAATACCACTGCAGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: YTSITSHLCTIDLKC*LHIVHRQVNTTAAE Trigger: TTCAGCTGCAGTGGTATTGACCTGTCTGTGCACTATATGTAGCAAGCATTTTAAATCTATAGTACACAAGTGGGAGGTAATAGAAGTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| 3UTR TCA 72 bp | CGTGCAGTGCTGGGATTCCAGTCCTTAAACTCAGCGTaGTTGGTCAAACGAGGCAAGGTGAGGAGCAGACAT | + |
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Preference number: 3 (lower is better) Translates to: RAVLGFQSLNSA*LVKRGKVRSRH Trigger: ATGTCTGCTCCTCACCTTGCCTCGTTTGACCAATCACGCTGAGTTTAAGGACTGGAATCCCAGCACTGCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124731.3 |
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| 3UTR GCA 72 bp | TACTCCTCCAGAGCATGCAGACACTGCACCGCTTCCTaGATGGTAAATTCCAAATGCTGGGGCTCATCTTCT | + |
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Preference number: 3 (lower is better) Translates to: YSSRACRHCTAS*MVNSKCWGSSS Trigger: AGAAGATGAGCCCCAGCATTTGGAATTTACCATGCAGGAAGCGGTGCAGTGTCTGCATGCTCTGGAGGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124731.3 |
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| 3UTR GCA 72 bp | TTAGAAGGGCAGTACTCCTCCAGAGCATGCAGACACTaGACCGCTTCCTGCATGGTAAATTCCAAATGCTGG | + |
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Preference number: 3 (lower is better) Translates to: LEGQYSSRACRH*TASCMVNSKCW Trigger: CCAGCATTTGGAATTTACCATGCAGGAAGCGGTGCAGTGTCTGCATGCTCTGGAGGAGTACTGCCCTTCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124731.3 |
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| 3UTR TCA 72 bp | TCATCTGGAGGCTCTGTGGTGAGCCCTATGCAAAGATaGTCAGGTAAAATTGGAGACTTACCAAACCCTGAC | + |
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Preference number: 3 (lower is better) Translates to: SSGGSVVSPMQR*SGKIGDLPNPD Trigger: GTCAGGGTTTGGTAAGTCTCCAATTTTACCTGATCATCTTTGCATAGGGCTCACCACAGAGCCTCCAGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| 3UTR CCA 72 bp | TTTGGCAAGGAAACTACACAGCAGCATGAACACACATaGAAGACTGAAAACCACCACCCAACACCTTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: FGKETTQQHEHT*KTENHHPTPSV Trigger: AACAGAAGGTGTTGGGTGGTGGTTTTCAGTCTTCCATGTGTGTTCATGCTGCTGTGTAGTTTCCTTGCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| 3UTR CCA 72 bp | ACCCAAGGAGTGCACTTAATAACCATGAACCCATCCTaGACCATGACTTGGGATGCAAACCAACAACATAAG | + |
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Preference number: 3 (lower is better) Translates to: TQGVHLITMNPS*TMTWDANQQHK Trigger: CTTATGTTGTTGGTTTGCATCCCAAGTCATGGTCCAGGATGGGTTCATGGTTATTAAGTGCACTCCTTGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| 3UTR CCA 72 bp | CACTTAATAACCATGAACCCATCCTGGACCATGACTTaGGATGCAAACCAACAACATAAGAGCTCTTCTGCA | + |
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Preference number: 3 (lower is better) Translates to: HLITMNPSWTMT*DANQQHKSSSA Trigger: TGCAGAAGAGCTCTTATGTTGTTGGTTTGCATCCCAAGTCATGGTCCAGGATGGGTTCATGGTTATTAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| 3UTR TCA 72 bp | AAGTTCCCAAAGCAAAATGGTTATTACCTTTTAGCCTaGAACAAAGTGACGTGTCAAATTAGCAACCACACC | + |
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Preference number: 3 (lower is better) Translates to: KFPKQNGYYLLA*NKVTCQISNHT Trigger: GGTGTGGTTGCTAATTTGACACGTCACTTTGTTTCAGGCTAAAAGGTAATAACCATTTTGCTTTGGGAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| 3UTR GCA 72 bp | TCTATTACCTCCCACTTGTGTACTATAGATTTAAAATaGTTGCTACATATAGTGCACAGACAGGTCAATACC | + |
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Preference number: 3 (lower is better) Translates to: SITSHLCTIDLK*LLHIVHRQVNT Trigger: GGTATTGACCTGTCTGTGCACTATATGTAGCAAGCATTTTAAATCTATAGTACACAAGTGGGAGGTAATAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR TCA 90 bp | TGTAGTCCTAACAGTTCAGTAGTCTGGGGTCTGTGTTTGCACGGCATAGGCCAGGAGGAAGCTGCTTGGTaGGGTCCCCTTGCAGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: CSPNSSVVWGLCLHGIGQEEAAW*GPLAGL Trigger: CAGACCTGCAAGGGGACCTCACCAAGCAGCTTCCTC...CTGGCCTATGCCGTGCAAACACAGACCCCAGACTACTGAACTGTTAGGACTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR GCA 90 bp | GGAAGAAGCAGCTCTCCTTTCATCTGGAGGCTCTGTGGTGAGCCCTATGCAAAGCCTGGGTGTGCCATCTaGACTGGATCACCTTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: GRSSSPFIWRLCGEPYAKPGCAI*TGSPCP Trigger: AGGACAAGGTGATCCAGTGCAGATGGCACACCCAGG...CTTTGCATAGGGCTCACCACAGAGCCTCCAGATGAAAGGAGAGCTGCTTCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR GCA 90 bp | GGAAGAAGCAGCTCTCCTTTCATCTGGAGGCTCTGTGGTGAGCCCTATGCAAAGGAGAGATCCTGGGTGTaGCATCTGCACTGGATCACC | + |
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Preference number: 4 (lower is better) Translates to: GRSSSPFIWRLCGEPYAKERSWV*HLHWIT Trigger: GGTGATCCAGTGCAGATGGCACACCCAGGATCTCTC...CTTTGCATAGGGCTCACCACAGAGCCTCCAGATGAAAGGAGAGCTGCTTCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR GCA 90 bp | GTGAGTATAAACTGTGACCTGGGTAACACCCAAGGAGTGCACTTAATAACCATGGTCCACAGCCACAGATaGCACTGCACTGCCAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: VSINCDLGNTQGVHLITMVHSHR*HCTASS Trigger: GGAACTGGCAGTGCAGTGGCATCTGTGGCTGTGGAC...CATGGTTATTAAGTGCACTCCTTGGGTGTTACCCAGGTCACAGTTTATACTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR CCA 90 bp | ATGACTTGGGATGCAAACCAACAACATAAGAGCTCTTCTGCAGACTTTGGCAAGCTGACCCCTGGCACATaGCTTCACTGCTCACAGGCT | + |
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Preference number: 4 (lower is better) Translates to: MTWDANQQHKSSSADFGKLTPGT*LHCSQA Trigger: AGCCTGTGAGCAGTGAAGCCATGTGCCAGGGGTCAG...CTTGCCAAAGTCTGCAGAAGAGCTCTTATGTTGTTGGTTTGCATCCCAAGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR CCA 90 bp | CAGCATGAACACACATGGAAGACTGAAAACCACCACCCAACACCTTCTGTTCATAGGAAGGAGAGATCCTaGGTGTGCCATCTGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: QHEHTWKTENHHPTPSVHRKERS*VCHLHW Trigger: CCAGTGCAGATGGCACACCCAGGATCTCTCCTTCCT...ATGAACAGAAGGTGTTGGGTGGTGGTTTTCAGTCTTCCATGTGTGTTCATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR TCA 90 bp | ATGACTTGGGATGCAAACCAACAACATAAGAGCTCTTCTGCAGACTTTGGCAAGTCTGTCCGCAGAGGATaGGAGGAAGGAGAGATCCTG | + |
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Preference number: 4 (lower is better) Translates to: MTWDANQQHKSSSADFGKSVRRG*EEGEIL Trigger: CAGGATCTCTCCTTCCTCTCATCCTCTGCGGACAGA...CTTGCCAAAGTCTGCAGAAGAGCTCTTATGTTGTTGGTTTGCATCCCAAGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR GCA 90 bp | ATGACTTGGGATGCAAACCAACAACATAAGAGCTCTTCTGCAGACTTTGGCAAGTACTCCTCCAGAGCATaGAGACACTGCACCGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: MTWDANQQHKSSSADFGKYSSRA*RHCTAS Trigger: GGAAGCGGTGCAGTGTCTGCATGCTCTGGAGGAGTA...CTTGCCAAAGTCTGCAGAAGAGCTCTTATGTTGTTGGTTTGCATCCCAAGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR GCA 90 bp | TGTAGTCCTAACAGTTCAGTAGTCTGGGGTCTGTGTTTGCACGGCATAGGCCAGTTGATCCATTGTTTTTaGTCCCGCTGCATTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: CSPNSSVVWGLCLHGIGQLIHCF*SRCIAG Trigger: ACCAGCAATGCAGCGGGAGCAAAAACAATGGATCAA...CTGGCCTATGCCGTGCAAACACAGACCCCAGACTACTGAACTGTTAGGACTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR GCA 90 bp | GTGAGTATAAACTGTGACCTGGGTAACACCCAAGGAGTGCACTTAATAACCATGACCATGAGAGGAAGCTaGTTGGTGAGGTCCCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: VSINCDLGNTQGVHLITMTMRGS*LVRSPC Trigger: GCAAGGGGACCTCACCAAGCAGCTTCCTCTCATGGT...CATGGTTATTAAGTGCACTCCTTGGGTGTTACCCAGGTCACAGTTTATACTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR GCA 90 bp | ACTTACCAAACCCTGACCTCTAGAAGACACGTGATACAGTATGGGATCGTGACACAGATGCCACTGCACTaGCAGTTCCATGGAATGTTG | + |
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Preference number: 4 (lower is better) Translates to: TYQTLTSRRHVIQYGIVTQMPLH*QFHGML Trigger: CAACATTCCATGGAACTGGCAGTGCAGTGGCATCTG...TGTCACGATCCCATACTGTATCACGTGTCTTCTAGAGGTCAGGGTTTGGTAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR GCA 90 bp | CAAACCAACAACATAAGAGCTCTTCTGCAGACTTTGGCAAGGAAACTACACAGCATCACCTTGTCCTTGTaGTCCCCCACCACCATGAGA | + |
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Preference number: 4 (lower is better) Translates to: QTNNIRALLQTLARKLHSITLSL*SPTTMR Trigger: TCTCATGGTGGTGGGGGAGCACAAGGACAAGGTGAT...GCTGTGTAGTTTCCTTGCCAAAGTCTGCAGAAGAGCTCTTATGTTGTTGGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR CCA 90 bp | ATGACTTGGGATGCAAACCAACAACATAAGAGCTCTTCTGCAGACTTTGGCAAGCAGAGCGAACGTCACTaGAGTGAGGGTGGTAACTCT | + |
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Preference number: 4 (lower is better) Translates to: MTWDANQQHKSSSADFGKQSERH*SEGGNS Trigger: AGAGTTACCACCCTCACTCCAGTGACGTTCGCTCTG...CTTGCCAAAGTCTGCAGAAGAGCTCTTATGTTGTTGGTTTGCATCCCAAGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR TCA 90 bp | GGGATTCCAGTCCTTAAACTCAGCGTGATTGGTCAAACGAGGCAAGGTGAGGAGGCCAGCATACTAATGTaGAGCTTCTTTGAATTCAAG | + |
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Preference number: 4 (lower is better) Translates to: GIPVLKLSVIGQTRQGEEASILM*SFFEFK Trigger: CTTGAATTCAAAGAAGCTTCACATTAGTATGCTGGC...CTCCTCACCTTGCCTCGTTTGACCAATCACGCTGAGTTTAAGGACTGGAATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124731.3 |
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| CDS-3UTR TCA 90 bp | GGGATTCCAGTCCTTAAACTCAGCGTGATTGGTCAAACGAGGCAAGGTGAGGAGGAAGAGCATATCATCTaGAAACAGGCCATTTATGAC | + |
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Preference number: 4 (lower is better) Translates to: GIPVLKLSVIGQTRQGEEEEHII*KQAIYD Trigger: GTCATAAATGGCCTGTTTTCAGATGATATGCTCTTC...CTCCTCACCTTGCCTCGTTTGACCAATCACGCTGAGTTTAAGGACTGGAATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124731.3 |
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| CDS-3UTR TCA 90 bp | ACTTACCAAACCCTGACCTCTAGAAGACACGTGATACAGTATGGGATCGTGACATCCTTAAACTCAGCGTaGTTGGTCAAACGAGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: TYQTLTSRRHVIQYGIVTSLNSA*LVKRGK Trigger: CTTGCCTCGTTTGACCAATCACGCTGAGTTTAAGGA...TGTCACGATCCCATACTGTATCACGTGTCTTCTAGAGGTCAGGGTTTGGTAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR GCA 90 bp | CAGCATGAACACACATGGAAGACTGAAAACCACCACCCAACACCTTCTGTTCATCACTGCACCGCTTCCTaGATGGTAAATTCCAAATGC | + |
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Preference number: 4 (lower is better) Translates to: QHEHTWKTENHHPTPSVHHCTAS*MVNSKC Trigger: GCATTTGGAATTTACCATGCAGGAAGCGGTGCAGTG...ATGAACAGAAGGTGTTGGGTGGTGGTTTTCAGTCTTCCATGTGTGTTCATGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR GCA 90 bp | ATGACTTGGGATGCAAACCAACAACATAAGAGCTCTTCTGCAGACTTTGGCAAGAAAGCAGTGAACTCGTaGAGTGCTGGGATTCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: MTWDANQQHKSSSADFGKKAVNS*SAGIPV Trigger: GACTGGAATCCCAGCACTGCACGAGTTCACTGCTTT...CTTGCCAAAGTCTGCAGAAGAGCTCTTATGTTGTTGGTTTGCATCCCAAGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR GCA 90 bp | GTGAGTATAAACTGTGACCTGGGTAACACCCAAGGAGTGCACTTAATAACCATGATCTGCTGGTACATCTaGCGCTGTTGCTCCTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: VSINCDLGNTQGVHLITMICWYI*RCCSFC Trigger: ACAGAAGGAGCAACAGCGGCAGATGTACCAGCAGAT...CATGGTTATTAAGTGCACTCCTTGGGTGTTACCCAGGTCACAGTTTATACTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR GCA 90 bp | CAGCATGAACACACATGGAAGACTGAAAACCACCACCCAACACCTTCTGTTCATCCTTCAAGTAACATCTaGTGGTACATCTGCCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: QHEHTWKTENHHPTPSVHPSSNI*WYICRC Trigger: ACAGCGGCAGATGTACCAGCAGATGTTACTTGAAGG...ATGAACAGAAGGTGTTGGGTGGTGGTTTTCAGTCTTCCATGTGTGTTCATGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR TCA 90 bp | CAAACCAACAACATAAGAGCTCTTCTGCAGACTTTGGCAAGGAAACTACACAGCCATCCAAAGCAGGATTaGGAGAGCGAGTCATATAGG | + |
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Preference number: 4 (lower is better) Translates to: QTNNIRALLQTLARKLHSHPKQD*ESESYR Trigger: CCTATATGACTCGCTCTCTCAATCCTGCTTTGGATG...GCTGTGTAGTTTCCTTGCCAAAGTCTGCAGAAGAGCTCTTATGTTGTTGGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR GCA 90 bp | TTAAATTATCATGCAAACATAGCTTTTCAAGCCATGCTAGGGTCATGGCAAAGTTCACTGCTCACAGGCTaGTGGGCCTCAACAGGCGTA | + |
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Preference number: 4 (lower is better) Translates to: LNYHANIAFQAMLGSWQSSLLTG*WASTGV Trigger: TACGCCTGTTGAGGCCCAGCAGCCTGTGAGCAGTGA...ACTTTGCCATGACCCTAGCATGGCTTGAAAAGCTATGTTTGCATGATAATTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR GCA 90 bp | TTAAATTATCATGCAAACATAGCTTTTCAAGCCATGCTAGGGTCATGGCAAAGTTTGCTCCCGCTGCATTaGTGGTTGAGCACTGGCACC | + |
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Preference number: 4 (lower is better) Translates to: LNYHANIAFQAMLGSWQSLLPLH*WLSTGT Trigger: GGTGCCAGTGCTCAACCAGCAATGCAGCGGGAGCAA...ACTTTGCCATGACCCTAGCATGGCTTGAAAAGCTATGTTTGCATGATAATTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR CCA 90 bp | ATGAACACACATGGAAGACTGAAAACCACCACCCAACACCTTCTGTTCATAGGATTGCTGGTTGAGCACTaGCACCTCATTACCAAGACT | + |
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Preference number: 4 (lower is better) Translates to: MNTHGRLKTTTQHLLFIGLLVEH*HLITKT Trigger: AGTCTTGGTAATGAGGTGCCAGTGCTCAACCAGCAA...TCCTATGAACAGAAGGTGTTGGGTGGTGGTTTTCAGTCTTCCATGTGTGTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR CCA 90 bp | CAGCATGAACACACATGGAAGACTGAAAACCACCACCCAACACCTTCTGTTCATCTAACAGTCTTATCCTaGGAACCAGACGCAATCATC | + |
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Preference number: 4 (lower is better) Translates to: QHEHTWKTENHHPTPSVHLTVLS*EPDAII Trigger: GATGATTGCGTCTGGTTCCCAGGATAAGACTGTTAG...ATGAACAGAAGGTGTTGGGTGGTGGTTTTCAGTCTTCCATGTGTGTTCATGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR TCA 90 bp | ACTTACCAAACCCTGACCTCTAGAAGACACGTGATACAGTATGGGATCGTGACATGCACAAGAAAAGACTaGAGAAGGGAGATTCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: TYQTLTSRRHVIQYGIVTCTRKD*RREILK Trigger: CTTCAGAATCTCCCTTCTTCAGTCTTTTCTTGTGCA...TGTCACGATCCCATACTGTATCACGTGTCTTCTAGAGGTCAGGGTTTGGTAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR TCA 90 bp | TTAAATTATCATGCAAACATAGCTTTTCAAGCCATGCTAGGGTCATGGCAAAGTCAGCTAGAGTCCTCCTaGCCTGTAGCTAAGAGACGG | + |
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Preference number: 4 (lower is better) Translates to: LNYHANIAFQAMLGSWQSQLESS*PVAKRR Trigger: CCGTCTCTTAGCTACAGGTCAGGAGGACTCTAGCTG...ACTTTGCCATGACCCTAGCATGGCTTGAAAAGCTATGTTTGCATGATAATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR GCA 90 bp | ATGAACACACATGGAAGACTGAAAACCACCACCCAACACCTTCTGTTCATAGGACAGGATTACGAGGAGTaGTTGTGTGAATATTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: MNTHGRLKTTTQHLLFIGQDYEE*LCEYWQ Trigger: CTGCCAATATTCACACAAGCACTCCTCGTAATCCTG...TCCTATGAACAGAAGGTGTTGGGTGGTGGTTTTCAGTCTTCCATGTGTGTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR GCA 90 bp | ATGAACACACATGGAAGACTGAAAACCACCACCCAACACCTTCTGTTCATAGGAAACTCTGGACCATTCTaGCTCCTCTTATGTCGTACA | + |
|
Preference number: 4 (lower is better) Translates to: MNTHGRLKTTTQHLLFIGNSGPF*LLLCRT Trigger: TGTACGACATAAGAGGAGGCAGAATGGTCCAGAGTT...TCCTATGAACAGAAGGTGTTGGGTGGTGGTTTTCAGTCTTCCATGTGTGTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CCA 90 bp | ATGACTTGGGATGCAAACCAACAACATAAGAGCTCTTCTGCAGACTTTGGCAAGTTGTTTAGCTGGAACTaGGTTCTGTGCTCCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: MTWDANQQHKSSSADFGKLFSWN*VLCSIC Trigger: GCAAATGGAGCACAGAACCCAGTTCCAGCTAAACAA...CTTGCCAAAGTCTGCAGAAGAGCTCTTATGTTGTTGGTTTGCATCCCAAGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CCA 90 bp | CACGTGATACAGTATGGGATCGTGACAAGAGCAAAGTCATTTCTGAATACCTCTTCAAGTAACATCTGCTaGTACATCTGCCGCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HVIQYGIVTRAKSFLNTSSSNIC*YICRCC Trigger: GCAACAGCGGCAGATGTACCAGCAGATGTTACTTGA...AGAGGTATTCAGAAATGACTTTGCTCTTGTCACGATCCCATACTGTATCACGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CCA 90 bp | GTGAGTATAAACTGTGACCTGGGTAACACCCAAGGAGTGCACTTAATAACCATGACTGGAATCTTGGGGTaGTGTACTGAAACTAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSINCDLGNTQGVHLITMTGILG*CTETSH Trigger: GTGACTAGTTTCAGTACACCACCCCAAGATTCCAGT...CATGGTTATTAAGTGCACTCCTTGGGTGTTACCCAGGTCACAGTTTATACTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CCA 90 bp | ATGAACACACATGGAAGACTGAAAACCACCACCCAACACCTTCTGTTCATAGGAGTATTAACCTCTGACTaGAATCTTGGGGTGGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MNTHGRLKTTTQHLLFIGVLTSD*NLGVVY Trigger: GTACACCACCCCAAGATTCCAGTCAGAGGTTAATAC...TCCTATGAACAGAAGGTGTTGGGTGGTGGTTTTCAGTCTTCCATGTGTGTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR TCA 90 bp | GTGAGTATAAACTGTGACCTGGGTAACACCCAAGGAGTGCACTTAATAACCATGCCAGTTGCTTTACTCTaGCAAAATTCTACGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSINCDLGNTQGVHLITMPVALL*QNSTQH Trigger: ATGCTGCGTAGAATTTTGTCAGAGTAAAGCAACTGG...CATGGTTATTAAGTGCACTCCTTGGGTGTTACCCAGGTCACAGTTTATACTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR TCA 90 bp | CAGCATGAACACACATGGAAGACTGAAAACCACCACCCAACACCTTCTGTTCATGAAGAAGGGAGATTCTaGAGCCAAGACAATAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: QHEHTWKTENHHPTPSVHEEGRF*SQDNKL Trigger: AAGTTTATTGTCTTGGCTTCAGAATCTCCCTTCTTC...ATGAACAGAAGGTGTTGGGTGGTGGTTTTCAGTCTTCCATGTGTGTTCATGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR TCA 90 bp | TGCTTGCTACATATAGTGCACAGACAGGTCAATACCACTGCAGCTGAAATAAATCATATAGGCATCAGCTaGCTGAGGTCTTCTCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLLHIVHRQVNTTAAEINHIGIS*LRSSHW Trigger: CCAATGAGAAGACCTCAGTCAGCTGATGCCTATATG...ATTTATTTCAGCTGCAGTGGTATTGACCTGTCTGTGCACTATATGTAGCAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR TCA 90 bp | TATCATGCAAACATAGCTTTTCAAGCCATGCTAGGGTCATGGCAAAGTCTTAATGTAAGATTCTGCTGCTaGTCAGGACCATCCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YHANIAFQAMLGSWQSLNVRFCC*SGPSSW Trigger: CCAAGAGGATGGTCCTGATCAGCAGCAGAATCTTAC...ATTAAGACTTTGCCATGACCCTAGCATGGCTTGAAAAGCTATGTTTGCATGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR TCA 90 bp | CACGTGATACAGTATGGGATCGTGACAAGAGCAAAGTCATTTCTGAATACCTCTCGAGGAGTGCTTGTGTaGATATTGGCAGTATCATGT | + |
|
Preference number: 4 (lower is better) Translates to: HVIQYGIVTRAKSFLNTSRGVLV*ILAVSC Trigger: ACATGATACTGCCAATATTCACACAAGCACTCCTCG...AGAGGTATTCAGAAATGACTTTGCTCTTGTCACGATCCCATACTGTATCACGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR GCA 90 bp | TATCATGCAAACATAGCTTTTCAAGCCATGCTAGGGTCATGGCAAAGTCTTAATTACATCTGCCGCTGTTaGTCCTTCTGTTCTAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: YHANIAFQAMLGSWQSLNYICRC*SFCSRC Trigger: GCACCTAGAACAGAAGGAGCAACAGCGGCAGATGTA...ATTAAGACTTTGCCATGACCCTAGCATGGCTTGAAAAGCTATGTTTGCATGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR GCA 90 bp | TGCTTGCTACATATAGTGCACAGACAGGTCAATACCACTGCAGCTGAAATAAATTTGGTGAGGTCCCCTTaGAGGTCTGTCACCTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: CLLHIVHRQVNTTAAEINLVRSP*RSVTFI Trigger: AATAAAGGTGACAGACCTGCAAGGGGACCTCACCAA...ATTTATTTCAGCTGCAGTGGTATTGACCTGTCTGTGCACTATATGTAGCAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CCA 90 bp | CATGGAAGACTGAAAACCACCACCCAACACCTTCTGTTCATAGGAAATGGTAATGAGGTTCTGTACCCCTaGATAGTGGAAGTTAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HGRLKTTTQHLLFIGNGNEVLYP*IVEVSK Trigger: TTTGCTAACTTCCACTATCCAGGGGTACAGAACCTC...ATTACCATTTCCTATGAACAGAAGGTGTTGGGTGGTGGTTTTCAGTCTTCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CCA 90 bp | CAAACCAACAACATAAGAGCTCTTCTGCAGACTTTGGCAAGGAAACTACACAGCTTTTTCTTGTTTAGCTaGAACTGGGTTCTGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTNNIRALLQTLARKLHSFFLFS*NWVLCS Trigger: GGAGCACAGAACCCAGTTCCAGCTAAACAAGAAAAA...GCTGTGTAGTTTCCTTGCCAAAGTCTGCAGAAGAGCTCTTATGTTGTTGGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CCA 90 bp | CATGGAAGACTGAAAACCACCACCCAACACCTTCTGTTCATAGGAAATGGTAATTTTAAATCGCACCACTaGCTGCTTAGGATTGTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: HGRLKTTTQHLLFIGNGNFKSHH*LLRIVV Trigger: CACGACAATCCTAAGCAGCCAGTGGTGCGATTTAAA...ATTACCATTTCCTATGAACAGAAGGTGTTGGGTGGTGGTTTTCAGTCTTCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CCA 90 bp | TTAAATTATCATGCAAACATAGCTTTTCAAGCCATGCTAGGGTCATGGCAAAGTGTGTGCCATCTGCACTaGATCACCTTGTCCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LNYHANIAFQAMLGSWQSVCHLH*ITLSLC Trigger: GCACAAGGACAAGGTGATCCAGTGCAGATGGCACAC...ACTTTGCCATGACCCTAGCATGGCTTGAAAAGCTATGTTTGCATGATAATTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| 3UTR CAA 72 bp | ATGCAAACCAACAACATAAGAGCTCTTCTGCAGACTTaGGCAAGGAAACTACACAGCAGCATGAACACACAT | + |
|
Preference number: 4 (lower is better) Translates to: MQTNNIRALLQT*ARKLHSSMNTH Trigger: ATGTGTGTTCATGCTGCTGTGTAGTTTCCTTGCCAAAGTCTGCAGAAGAGCTCTTATGTTGTTGGTTTGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| 3UTR CAA 72 bp | TCCAAATGCTGGGGCTCATCTTCTGCAGACATTGCATaGTTAACACACAAAGCTTCTAGAAACTTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKCWGSSSADIA*LTHKASRNFCF Trigger: GAAGCAGAAGTTTCTAGAAGCTTTGTGTGTTAACAATGCAATGTCTGCAGAAGATGAGCCCCAGCATTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124731.3 |
||
| CDS-3UTR TCA 90 bp | ATGAACACACATGGAAGACTGAAAACCACCACCCAACACCTTCTGTTCATAGGAGCCAGCATACTAATGTaGAGCTTCTTTGAATTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: MNTHGRLKTTTQHLLFIGASILM*SFFEFK Trigger: CTTGAATTCAAAGAAGCTTCACATTAGTATGCTGGC...TCCTATGAACAGAAGGTGTTGGGTGGTGGTTTTCAGTCTTCCATGTGTGTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR TCA 90 bp | ATGACTTGGGATGCAAACCAACAACATAAGAGCTCTTCTGCAGACTTTGGCAAGGAAGAGCATATCATCTaGAAACAGGCCATTTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: MTWDANQQHKSSSADFGKEEHII*KQAIYD Trigger: GTCATAAATGGCCTGTTTTCAGATGATATGCTCTTC...CTTGCCAAAGTCTGCAGAAGAGCTCTTATGTTGTTGGTTTGCATCCCAAGTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR TCA 90 bp | ATGAACACACATGGAAGACTGAAAACCACCACCCAACACCTTCTGTTCATAGGAGTTAGCAAAGGAGTGTaGCATTGGAGAAGTTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MNTHGRLKTTTQHLLFIGVSKGV*HWRSFV Trigger: AACAAAACTTCTCCAATGTCACACTCCTTTGCTAAC...TCCTATGAACAGAAGGTGTTGGGTGGTGGTTTTCAGTCTTCCATGTGTGTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR TCA 90 bp | TATCATGCAAACATAGCTTTTCAAGCCATGCTAGGGTCATGGCAAAGTCTTAATAGGGATGTGATTCGTTaGTCCAGGATTACGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YHANIAFQAMLGSWQSLNRDVIR*SRITRS Trigger: ACTCCTCGTAATCCTGGATCAACGAATCACATCCCT...ATTAAGACTTTGCCATGACCCTAGCATGGCTTGAAAAGCTATGTTTGCATGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR GCA 90 bp | CATGGAAGACTGAAAACCACCACCCAACACCTTCTGTTCATAGGAAATGGTAATCAACAGATCAGCATATaGAGCTTTTGTAGGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HGRLKTTTQHLLFIGNGNQQISI*SFCRLQ Trigger: CTGAAGCCTACAAAAGCTGCATATGCTGATCTGTTG...ATTACCATTTCCTATGAACAGAAGGTGTTGGGTGGTGGTTTTCAGTCTTCCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR GCA 90 bp | TTAAATTATCATGCAAACATAGCTTTTCAAGCCATGCTAGGGTCATGGCAAAGTAATCGCACCACTGGCTaGTTAGGATTGTCGTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LNYHANIAFQAMLGSWQSNRTTG*LGLSCA Trigger: TGCACACGACAATCCTAAGCAGCCAGTGGTGCGATT...ACTTTGCCATGACCCTAGCATGGCTTGAAAAGCTATGTTTGCATGATAATTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR GCA 90 bp | ATGACTTGGGATGCAAACCAACAACATAAGAGCTCTTCTGCAGACTTTGGCAAGCGAATTGTCCCATCATaGATGCTAAATTCCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: MTWDANQQHKSSSADFGKRIVPS*MLNSRS Trigger: AGATCTGGAATTTAGCATGCATGATGGGACAATTCG...CTTGCCAAAGTCTGCAGAAGAGCTCTTATGTTGTTGGTTTGCATCCCAAGTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR TCA 90 bp | TGCTTGCTACATATAGTGCACAGACAGGTCAATACCACTGCAGCTGAAATAAATATTCTAGAGGCTGAATaGACTGAAGAACTTCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: CLLHIVHRQVNTTAAEINILEAE*TEELHP Trigger: GGGATGAAGTTCTTCAGTTCATTCAGCCTCTAGAAT...ATTTATTTCAGCTGCAGTGGTATTGACCTGTCTGTGCACTATATGTAGCAAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR GCA 90 bp | TATCATGCAAACATAGCTTTTCAAGCCATGCTAGGGTCATGGCAAAGTCTTAATCTGGGGCTCATCTTCTaGAGACATTGCATTGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: YHANIAFQAMLGSWQSLNLGLIF*RHCIVN Trigger: GTTAACAATGCAATGTCTGCAGAAGATGAGCCCCAG...ATTAAGACTTTGCCATGACCCTAGCATGGCTTGAAAAGCTATGTTTGCATGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR GCA 90 bp | GTTTTAGCTGGGGGAGAACCTGGACCTAGTATGTGTAACAATTACTTAAATTATAGCAGGAATGAACTCTaGAACCATGACACAGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLAGGEPGPSMCNNYLNYSRNEL*NHDTDL Trigger: GAGGTCTGTGTCATGGTTGCAGAGTTCATTCCTGCT...ATAATTTAAGTAATTGTTACACATACTAGGTCCAGGTTCTCCCCCAGCTAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR GCA 90 bp | TGCTTGCTACATATAGTGCACAGACAGGTCAATACCACTGCAGCTGAAATAAATTGCATTACATGTCTCTaGATTGAAGGGCAGCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: CLLHIVHRQVNTTAAEINCITCL*IEGQHF Trigger: AAAGTGCTGCCCTTCAATGCAGAGACATGTAATGCA...ATTTATTTCAGCTGCAGTGGTATTGACCTGTCTGTGCACTATATGTAGCAAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR CCA 90 bp | TATCATGCAAACATAGCTTTTCAAGCCATGCTAGGGTCATGGCAAAGTCTTAATGTAAATTCCAAATGCTaGGGCTCATCTTCTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: YHANIAFQAMLGSWQSLNVNSKC*GSSSAD Trigger: GTCTGCAGAAGATGAGCCCCAGCATTTGGAATTTAC...ATTAAGACTTTGCCATGACCCTAGCATGGCTTGAAAAGCTATGTTTGCATGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CCA 90 bp | TATCATGCAAACATAGCTTTTCAAGCCATGCTAGGGTCATGGCAAAGTCTTAATTGTTCTGATGAGTTCTaGCTTCCACAAGGTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YHANIAFQAMLGSWQSLNCSDEF*LPQGES Trigger: AGACTCACCTTGTGGAAGCCAGAACTCATCAGAACA...ATTAAGACTTTGCCATGACCCTAGCATGGCTTGAAAAGCTATGTTTGCATGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CCA 90 bp | TTAAATTATCATGCAAACATAGCTTTTCAAGCCATGCTAGGGTCATGGCAAAGTCACACGAACACAGCTTaGTACACGAAGATCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LNYHANIAFQAMLGSWQSHTNTA*YTKIPE Trigger: TTCTGGGATCTTCGTGTACCAAGCTGTGTTCGTGTG...ACTTTGCCATGACCCTAGCATGGCTTGAAAAGCTATGTTTGCATGATAATTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR TCA 90 bp | TTAAATTATCATGCAAACATAGCTTTTCAAGCCATGCTAGGGTCATGGCAAAGTTCATGTATTAACCTCTaGCTGGAATCTTGGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LNYHANIAFQAMLGSWQSSCINL*LESWGG Trigger: ACCACCCCAAGATTCCAGTCAGAGGTTAATACATGA...ACTTTGCCATGACCCTAGCATGGCTTGAAAAGCTATGTTTGCATGATAATTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR GCA 90 bp | TTAAATTATCATGCAAACATAGCTTTTCAAGCCATGCTAGGGTCATGGCAAAGTTGGGCCTTCCATAAATaGCAAATCTCGAATTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LNYHANIAFQAMLGSWQSWAFHK*QISNCP Trigger: GGGACAATTCGAGATTTGGCATTTATGGAAGGCCCA...ACTTTGCCATGACCCTAGCATGGCTTGAAAAGCTATGTTTGCATGATAATTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR TCA 90 bp | GCACAGTTACACTTCTATTACCTCCCACTTGTGTACTATAGATTTAAAATGCTTTCTTCTCATTGGAGATaGAGGGTAGGGAGACAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: AQLHFYYLPLVYYRFKMLSSHWR*RVGRQF Trigger: AAACTGTCTCCCTACCCTTCATCTCCAATGAGAAGA...AAGCATTTTAAATCTATAGTACACAAGTGGGAGGTAATAGAAGTGTAACTGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR TCA 90 bp | TATCATGCAAACATAGCTTTTCAAGCCATGCTAGGGTCATGGCAAAGTCTTAATTTTGTTCCCAAGATCTaGGATCCTCTTATCATGACT | + |
|
Preference number: 4 (lower is better) Translates to: YHANIAFQAMLGSWQSLNFVPKI*DPLIMT Trigger: AGTCATGATAAGAGGATCTCAGATCTTGGGAACAAA...ATTAAGACTTTGCCATGACCCTAGCATGGCTTGAAAAGCTATGTTTGCATGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR GCA 90 bp | TGCTTGCTACATATAGTGCACAGACAGGTCAATACCACTGCAGCTGAAATAAATATCTTCTGCAGACATTaGATTGTTAACACACAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLLHIVHRQVNTTAAEINIFCRH*IVNTQS Trigger: GCTTTGTGTGTTAACAATGCAATGTCTGCAGAAGAT...ATTTATTTCAGCTGCAGTGGTATTGACCTGTCTGTGCACTATATGTAGCAAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CCA 90 bp | TATCATGCAAACATAGCTTTTCAAGCCATGCTAGGGTCATGGCAAAGTCTTAATGCTAAATTCCAGATCTaGTCCTGTTGCATTACATGT | + |
|
Preference number: 4 (lower is better) Translates to: YHANIAFQAMLGSWQSLNAKFQI*SCCITC Trigger: ACATGTAATGCAACAGGACCAGATCTGGAATTTAGC...ATTAAGACTTTGCCATGACCCTAGCATGGCTTGAAAAGCTATGTTTGCATGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CCA 90 bp | TTAAATTATCATGCAAACATAGCTTTTCAAGCCATGCTAGGGTCATGGCAAAGTCCCTTCATTACGAGCTaGAATAAGCGATTGTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: LNYHANIAFQAMLGSWQSPFITS*NKRLLL Trigger: AAGTAACAATCGCTTATTCCAGCTCGTAATGAAGGG...ACTTTGCCATGACCCTAGCATGGCTTGAAAAGCTATGTTTGCATGATAATTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| 3UTR CAA 72 bp | ATTACCTCCCACTTGTGTACTATAGATTTAAAATGCTaGCTACATATAGTGCACAGACAGGTCAATACCACT | + |
|
Preference number: 4 (lower is better) Translates to: ITSHLCTIDLKC*LHIVHRQVNTT Trigger: AGTGGTATTGACCTGTCTGTGCACTATATGTAGCAAGCATTTTAAATCTATAGTACACAAGTGGGAGGTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR TCA 90 bp | GCACAGTTACACTTCTATTACCTCCCACTTGTGTACTATAGATTTAAAATGCTTCACAGAGGAATTATTTaGTCCATTGTTTTTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AQLHFYYLPLVYYRFKMLHRGII*SIVFAP Trigger: GGGAGCAAAAACAATGGATCAAATAATTCCTCTGTG...AAGCATTTTAAATCTATAGTACACAAGTGGGAGGTAATAGAAGTGTAACTGTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS GCA 90 bp | ACAGTTCTGTCCGCAGAGGATGAGAGGAAGGAGAGATCCTGGGTGTaGCATCTGCACTGGATCACCTTGTCCTTGTGCTCCCCCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: TVLSAEDERKERSWV*HLHWITLSLCSPTT Trigger: GGTGGTGGGGGAGCACAAGGACAAGGTGATCCAGTGCAGATGGCACACCCAGGATCTCTCCTTCCTCTCATCCTCTGCGGACAGAACTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS GCA 90 bp | TTGCAGGCTCTTTTTCTAACCCTGACCCCTGGCACATGGCTTCACTaGTCACAGGCTGCTGGGCCTCAACAGGCGTATCACTTCGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LQALFLTLTPGTWLH*SQAAGPQQAYHFAQ Trigger: CTGAGCGAAGTGATACGCCTGTTGAGGCCCAGCAGCCTGTGAGCAGTGAAGCCATGTGCCAGGGGTCAGGGTTAGAAAAAGAGCCTGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS TCA 90 bp | CTAGCCACTGTAAGTCCAGAGGGTCACAGTTCTGTCCGCAGAGGATaGGAGGAAGGAGAGATCCTGGGTGTGCCATCTGCACTGGATCAC | + |
|
Preference number: 5 (lower is better) Translates to: LATVSPEGHSSVRRG*EEGEILGVPSALDH Trigger: GTGATCCAGTGCAGATGGCACACCCAGGATCTCTCCTTCCTCTCATCCTCTGCGGACAGAACTGTGACCCTCTGGACTTACAGTGGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS TCA 90 bp | ATTCTGCCTCCTCTTATGTCGTACAGCATGCAGCTAGAGTCCTCCTaGCCTGTAGCTAAGAGACGGCCACTGGGGTCCACAGCCACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ILPPLMSYSMQLESS*PVAKRRPLGSTATD Trigger: ATCTGTGGCTGTGGACCCCAGTGGCCGTCTCTTAGCTACAGGTCAGGAGGACTCTAGCTGCATGCTGTACGACATAAGAGGAGGCAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS GCA 90 bp | TCCTCTTGGTTCACGCCTCCTTCAAGTAACATCTGCTGGTACATCTaGCGCTGTTGCTCCTTCTGTTCTAGGTGCTGCTGGTACCGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSWFTPPSSNICWYI*RCCSFCSRCCWYRS Trigger: ACTGCGGTACCAGCAGCACCTAGAACAGAAGGAGCAACAGCGGCAGATGTACCAGCAGATGTTACTTGAAGGAGGCGTGAACCAAGAGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS CCA 90 bp | TCAGGACCATCCTCTTGGTTCACGCCTCCTTCAAGTAACATCTGCTaGTACATCTGCCGCTGTTGCTCCTTCTGTTCTAGGTGCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SGPSSWFTPPSSNIC*YICRCCSFCSRCCW Trigger: CCAGCAGCACCTAGAACAGAAGGAGCAACAGCGGCAGATGTACCAGCAGATGTTACTTGAAGGAGGCGTGAACCAAGAGGATGGTCCTGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS CCA 90 bp | GCAGATAGTGAGCTCCAGGAGAGAAGCGAACAGAGCGAACGTCACTaGAGTGAGGGTGGTAACTCTGGACCATTCTGCCTCCTCTTATGT | + |
|
Preference number: 5 (lower is better) Translates to: ADSELQERSEQSERH*SEGGNSGPFCLLLC Trigger: ACATAAGAGGAGGCAGAATGGTCCAGAGTTACCACCCTCACTCCAGTGACGTTCGCTCTGTTCGCTTCTCTCCTGGAGCTCACTATCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CAA 90 bp | GGAAGAAGCAGCTCTCCTTTCATCTGGAGGCTCTGTGGTGAGCCCTATGCAAAGAAGGGATGTGATTCGTaGATCCAGGATTACGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GRSSSPFIWRLCGEPYAKKGCDS*IQDYEE Trigger: CTCCTCGTAATCCTGGATCAACGAATCACATCCCTT...CTTTGCATAGGGCTCACCACAGAGCCTCCAGATGAAAGGAGAGCTGCTTCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CAA 90 bp | TGTAGTCCTAACAGTTCAGTAGTCTGGGGTCTGTGTTTGCACGGCATAGGCCAGCCAGATCTGGTCCTGTaGCATTACATGTCTCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CSPNSSVVWGLCLHGIGQPDLVL*HYMSLH Trigger: ATGCAGAGACATGTAATGCAACAGGACCAGATCTGG...CTGGCCTATGCCGTGCAAACACAGACCCCAGACTACTGAACTGTTAGGACTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CAA 90 bp | CAAACCAACAACATAAGAGCTCTTCTGCAGACTTTGGCAAGGAAACTACACAGCTGGATCACCTTGTCCTaGTGCTCCCCCACCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: QTNNIRALLQTLARKLHSWITLS*CSPTTM Trigger: CATGGTGGTGGGGGAGCACAAGGACAAGGTGATCCA...GCTGTGTAGTTTCCTTGCCAAAGTCTGCAGAAGAGCTCTTATGTTGTTGGTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CAA 90 bp | CACGTGATACAGTATGGGATCGTGACAAGAGCAAAGTCATTTCTGAATACCTCTCTGCACTGGATCACCTaGTCCTTGTGCTCCCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: HVIQYGIVTRAKSFLNTSLHWIT*SLCSPT Trigger: GGTGGGGGAGCACAAGGACAAGGTGATCCAGTGCAG...AGAGGTATTCAGAAATGACTTTGCTCTTGTCACGATCCCATACTGTATCACGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS GCA 90 bp | GAACTCTGCAACCATGACACAGACCTCTTCAAAGCAGTGAACTCGTaGAGTGCTGGGATTCCAGTCCTTAAACTCAGCGTGATTGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ELCNHDTDLFKAVNS*SAGIPVLKLSVIGQ Trigger: TTGACCAATCACGCTGAGTTTAAGGACTGGAATCCCAGCACTGCACGAGTTCACTGCTTTGAAGAGGTCTGTGTCATGGTTGCAGAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS CCA 90 bp | ACTGCCAGTTCCATGGAATGTTGTGCCAACCACACGAACACAGCTTaGTACACGAAGATCCCAGAATCTAACAGTCTTATCCTGGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: TASSMECCANHTNTA*YTKIPESNSLILGT Trigger: GGTTCCCAGGATAAGACTGTTAGATTCTGGGATCTTCGTGTACCAAGCTGTGTTCGTGTGGTTGGCACAACATTCCATGGAACTGGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CAA 90 bp | CAGCATGAACACACATGGAAGACTGAAAACCACCACCCAACACCTTCTGTTCATAAGAACTTCATCCCATaGGCCATCCAGGATCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QHEHTWKTENHHPTPSVHKNFIP*AIQDQL Trigger: CAGCTGATCCTGGATGGCCAATGGGATGAAGTTCTT...ATGAACAGAAGGTGTTGGGTGGTGGTTTTCAGTCTTCCATGTGTGTTCATGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CAA 90 bp | GGAAGAAGCAGCTCTCCTTTCATCTGGAGGCTCTGTGGTGAGCCCTATGCAAAGGAATTATTTGATCCATaGTTTTTGCTCCCGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GRSSSPFIWRLCGEPYAKELFDP*FLLPLH Trigger: ATGCAGCGGGAGCAAAAACAATGGATCAAATAATTC...CTTTGCATAGGGCTCACCACAGAGCCTCCAGATGAAAGGAGAGCTGCTTCTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CAA 90 bp | CAGCATGAACACACATGGAAGACTGAAAACCACCACCCAACACCTTCTGTTCATCCTCTGACTGGAATCTaGGGGTGGTGTACTGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: QHEHTWKTENHHPTPSVHPLTGI*GWCTET Trigger: AGTTTCAGTACACCACCCCAAGATTCCAGTCAGAGG...ATGAACAGAAGGTGTTGGGTGGTGGTTTTCAGTCTTCCATGTGTGTTCATGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS TCA 90 bp | GGAATCTTGGGGTGGTGTACTGAAACTAGTCACAGAGGAATTATTTaGTCCATTGTTTTTGCTCCCGCTGCATTGCTGGTTGAGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GILGWCTETSHRGII*SIVFAPAALLVEHW Trigger: CCAGTGCTCAACCAGCAATGCAGCGGGAGCAAAAACAATGGATCAAATAATTCCTCTGTGACTAGTTTCAGTACACCACCCCAAGATTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS GCA 90 bp | GTCACAGAGGAATTATTTGATCCATTGTTTTTGCTCCCGCTGCATTaGTGGTTGAGCACTGGCACCTCATTACCAAGACTATCCATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VTEELFDPLFLLPLH*WLSTGTSLPRLSIP Trigger: TGGAATGGATAGTCTTGGTAATGAGGTGCCAGTGCTCAACCAGCAATGCAGCGGGAGCAAAAACAATGGATCAAATAATTCCTCTGTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CAA 90 bp | CAAACCAACAACATAAGAGCTCTTCTGCAGACTTTGGCAAGGAAACTACACAGCTTTGATCCATTGTTTTaGCTCCCGCTGCATTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QTNNIRALLQTLARKLHSFDPLF*LPLHCW Trigger: CCAGCAATGCAGCGGGAGCAAAAACAATGGATCAAA...GCTGTGTAGTTTCCTTGCCAAAGTCTGCAGAAGAGCTCTTATGTTGTTGGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CAA 90 bp | TGCTTGCTACATATAGTGCACAGACAGGTCAATACCACTGCAGCTGAAATAAATCCACACGAACACAGCTaGGTACACGAAGATCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CLLHIVHRQVNTTAAEINPHEHS*VHEDPR Trigger: TCTGGGATCTTCGTGTACCAAGCTGTGTTCGTGTGG...ATTTATTTCAGCTGCAGTGGTATTGACCTGTCTGTGCACTATATGTAGCAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CAA 90 bp | TTAAATTATCATGCAAACATAGCTTTTCAAGCCATGCTAGGGTCATGGCAAAGTATGAGAGGAAGCTGCTaGGTGAGGTCCCCTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LNYHANIAFQAMLGSWQSMRGSC*VRSPCR Trigger: CCTGCAAGGGGACCTCACCAAGCAGCTTCCTCTCAT...ACTTTGCCATGACCCTAGCATGGCTTGAAAAGCTATGTTTGCATGATAATTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS TCA 90 bp | GACATTGGAGAAGTTTTGTTCCCAAGATCTGAGATCCTCTTATCATaGCTGGTTAACCCACATGTGAGGCCATCCAAAGCAGGATTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: DIGEVLFPRSEILLS*LVNPHVRPSKAGLR Trigger: TCTCAATCCTGCTTTGGATGGCCTCACATGTGGGTTAACCAGTCATGATAAGAGGATCTCAGATCTTGGGAACAAAACTTCTCCAATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS CCA 90 bp | TGTGATTCGTTGATCCAGGATTACGAGGAGTGCTTGTGTGAATATTaGCAGTATCATGTATTAACCTCTGACTGGAATCTTGGGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CDSLIQDYEECLCEY*QYHVLTSDWNLGVV Trigger: CACCACCCCAAGATTCCAGTCAGAGGTTAATACATGATACTGCCAATATTCACACAAGCACTCCTCGTAATCCTGGATCAACGAATCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS GCA 90 bp | CTTTCTGGGCCTTCCATAAATGCCAAATCTCGAATTGTCCCATCATaGATGCTAAATTCCAGATCTGGTCCTGTTGCATTACATGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSGPSINAKSRIVPS*MLNSRSGPVALHVS Trigger: AGAGACATGTAATGCAACAGGACCAGATCTGGAATTTAGCATGCATGATGGGACAATTCGAGATTTGGCATTTATGGAAGGCCCAGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS CCA 90 bp | ACAGAGGAATTATTTGATCCATTGTTTTTGCTCCCGCTGCATTGCTaGTTGAGCACTGGCACCTCATTACCAAGACTATCCATTCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: TEELFDPLFLLPLHC*LSTGTSLPRLSIPI Trigger: TATTGGAATGGATAGTCTTGGTAATGAGGTGCCAGTGCTCAACCAGCAATGCAGCGGGAGCAAAAACAATGGATCAAATAATTCCTCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CAA 90 bp | CATGGAAGACTGAAAACCACCACCCAACACCTTCTGTTCATAGGAAATGGTAATCTGGTACCGCAGTCTTaGCCTGTAATATTCCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: HGRLKTTTQHLLFIGNGNLVPQS*PVIFLK Trigger: TTTCAGGAATATTACAGGCAAAGACTGCGGTACCAG...ATTACCATTTCCTATGAACAGAAGGTGTTGGGTGGTGGTTTTCAGTCTTCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CAA 90 bp | GTGAGTATAAACTGTGACCTGGGTAACACCCAAGGAGTGCACTTAATAACCATGGATTACGAGGAGTGCTaGTGTGAATATTGGCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: VSINCDLGNTQGVHLITMDYEEC*CEYWQY Trigger: ATACTGCCAATATTCACACAAGCACTCCTCGTAATC...CATGGTTATTAAGTGCACTCCTTGGGTGTTACCCAGGTCACAGTTTATACTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CAA 90 bp | CACGTGATACAGTATGGGATCGTGACAAGAGCAAAGTCATTTCTGAATACCTCTTGTCATTTGATCCTGTaGCTAACAACTGTCCACACG | + |
|
Preference number: 5 (lower is better) Translates to: HVIQYGIVTRAKSFLNTSCHLIL*LTTVHT Trigger: CGTGTGGACAGTTGTTAGCAACAGGATCAAATGACA...AGAGGTATTCAGAAATGACTTTGCTCTTGTCACGATCCCATACTGTATCACGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CAA 90 bp | CAAACCAACAACATAAGAGCTCTTCTGCAGACTTTGGCAAGGAAACTACACAGCTTACATGTCTCTGCATaGAAGGGCAGCACTTTTACA | + |
|
Preference number: 5 (lower is better) Translates to: QTNNIRALLQTLARKLHSLHVSA*KGSTFT Trigger: TGTAAAAGTGCTGCCCTTCAATGCAGAGACATGTAA...GCTGTGTAGTTTCCTTGCCAAAGTCTGCAGAAGAGCTCTTATGTTGTTGGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR CAA 90 bp | TTAAATTATCATGCAAACATAGCTTTTCAAGCCATGCTAGGGTCATGGCAAAGTACTGAGGTCTTCTCATaGGAGATGAAGGGTAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LNYHANIAFQAMLGSWQSTEVFS*EMKGRE Trigger: CTCCCTACCCTTCATCTCCAATGAGAAGACCTCAGT...ACTTTGCCATGACCCTAGCATGGCTTGAAAAGCTATGTTTGCATGATAATTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR CAA 90 bp | CATGGAAGACTGAAAACCACCACCCAACACCTTCTGTTCATAGGAAATGGTAATGACATTGGAGAAGTTTaGTTCCCAAGATCTGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: HGRLKTTTQHLLFIGNGNDIGEV*FPRSEI Trigger: GATCTCAGATCTTGGGAACAAAACTTCTCCAATGTC...ATTACCATTTCCTATGAACAGAAGGTGTTGGGTGGTGGTTTTCAGTCTTCCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR CAA 90 bp | GCACAGTTACACTTCTATTACCTCCCACTTGTGTACTATAGATTTAAAATGCTTATCAGGACCATCCTCTaGGTTCACGCCTCCTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: AQLHFYYLPLVYYRFKMLIRTIL*VHASFK Trigger: CTTGAAGGAGGCGTGAACCAAGAGGATGGTCCTGAT...AAGCATTTTAAATCTATAGTACACAAGTGGGAGGTAATAGAAGTGTAACTGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS TCA 90 bp | AGGAATTATTTGATCCATTGTTTTTGCTCCCGCTGCATTGCTGGTTaGGCACTGGCACCTCATTACCAAGACTATCCATTCCAATATTTA | + |
|
Preference number: 5 (lower is better) Translates to: RNYLIHCFCSRCIAG*ALAPHYQDYPFQYL Trigger: TAAATATTGGAATGGATAGTCTTGGTAATGAGGTGCCAGTGCTCAACCAGCAATGCAGCGGGAGCAAAAACAATGGATCAAATAATTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS TCA 90 bp | AGAGTTTTTGAATTTGAACCAACAGCATATAAACTACCACTTGGATaGAACGCCACGGCTCTAACAGCCTGTGTGTCTTCTAGGGTATTA | + |
|
Preference number: 5 (lower is better) Translates to: RVFEFEPTAYKLPLG*NATALTACVSSRVL Trigger: TAATACCCTAGAAGACACACAGGCTGTTAGAGCCGTGGCGTTTCATCCAAGTGGTAGTTTATATGCTGTTGGTTCAAATTCAAAAACTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR CAA 90 bp | TTAAATTATCATGCAAACATAGCTTTTCAAGCCATGCTAGGGTCATGGCAAAGTGGTTCTGTGCTCCATTaGCAGGCTCTTTTTCTAACC | + |
|
Preference number: 5 (lower is better) Translates to: LNYHANIAFQAMLGSWQSGSVLH*QALFLT Trigger: GGTTAGAAAAAGAGCCTGCAAATGGAGCACAGAACC...ACTTTGCCATGACCCTAGCATGGCTTGAAAAGCTATGTTTGCATGATAATTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS-3UTR CAA 90 bp | CAAACCAACAACATAAGAGCTCTTCTGCAGACTTTGGCAAGGAAACTACACAGCACACTCTCAGAGTTTTaGAATTTGAACCAACAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QTNNIRALLQTLARKLHSTLSEF*NLNQQH Trigger: ATGCTGTTGGTTCAAATTCAAAAACTCTGAGAGTGT...GCTGTGTAGTTTCCTTGCCAAAGTCTGCAGAAGAGCTCTTATGTTGTTGGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS TCA 90 bp | TCCACTTTCCTTCTCCAGCGCCAGCATACTAATGTGAAGCTTCTTTaGATTCAAGAAGTCCAAAATCAGCTTAATGATCTCAACCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: STFLLQRQHTNVKLL*IQEVQNQLNDLNLF Trigger: AAAGAGGTTGAGATCATTAAGCTGATTTTGGACTTCTTGAATTCAAAGAAGCTTCACATTAGTATGCTGGCGCTGGAGAAGGAAAGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051145.15 ENSMUST00000124731.3 |
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| CDS TCA 90 bp | CCATTTATGACTCCACTTTCCTTCTCCAGCGCCAGCATACTAATGTaGAGCTTCTTTGAATTCAAGAAGTCCAAAATCAGCTTAATGATC | + |
|
Preference number: 5 (lower is better) Translates to: PFMTPLSFSSASILM*SFFEFKKSKISLMI Trigger: GATCATTAAGCTGATTTTGGACTTCTTGAATTCAAAGAAGCTTCACATTAGTATGCTGGCGCTGGAGAAGGAAAGTGGAGTCATAAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051145.15 ENSMUST00000124731.3 |
||
| CDS GCA 90 bp | GTAGGGAGACAGTTTGCTGATAAGAGGAGTCAACAGATCAGCATATaGAGCTTTTGTAGGCTTCAGAAGTTTGTCAACATGAATATTAAG | + |
|
Preference number: 5 (lower is better) Translates to: VGRQFADKRSQQISI*SFCRLQKFVNMNIK Trigger: CTTAATATTCATGTTGACAAACTTCTGAAGCCTACAAAAGCTGCATATGCTGATCTGTTGACTCCTCTTATCAGCAAACTGTCTCCCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CAA 90 bp | GTTTTAGCTGGGGGAGAACCTGGACCTAGTATGTGTAACAATTACTTAAATTATCATCCTCTTCCCCTTTaGACCTTGATAGATTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLAGGEPGPSMCNNYLNYHPLPL*TLIDFL Trigger: CAGGAAATCTATCAAGGTCAAAAGGGGAAGAGGATG...ATAATTTAAGTAATTGTTACACATACTAGGTCCAGGTTCTCCCCCAGCTAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CAA 90 bp | TATCATGCAAACATAGCTTTTCAAGCCATGCTAGGGTCATGGCAAAGTCTTAATAACTGCTTTTTCGACTaGTCATCCTCTTCCCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: YHANIAFQAMLGSWQSLNNCFFD*SSSSPF Trigger: AAAAGGGGAAGAGGATGACAAGTCGAAAAAGCAGTT...ATTAAGACTTTGCCATGACCCTAGCATGGCTTGAAAAGCTATGTTTGCATGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CAA 90 bp | GTTTTAGCTGGGGGAGAACCTGGACCTAGTATGTGTAACAATTACTTAAATTATCAAAGGAGTGTGACATaGGAGAAGTTTTGTTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VLAGGEPGPSMCNNYLNYQRSVT*EKFCSQ Trigger: TTGGGAACAAAACTTCTCCAATGTCACACTCCTTTG...ATAATTTAAGTAATTGTTACACATACTAGGTCCAGGTTCTCCCCCAGCTAAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS TCA 90 bp | ATTTTCTGTTCAAATGCACAAGAAAAGACTGAAGAAGGGAGATTCTaGAGCCAAGACAATAAACTTAGATCTAAATCGTCACAACCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: IFCSNAQEKTEEGRF*SQDNKLRSKSSQPL Trigger: CAACGGTTGTGACGATTTAGATCTAAGTTTATTGTCTTGGCTTCAGAATCTCCCTTCTTCAGTCTTTTCTTGTGCATTTGAACAGAAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CAA 90 bp | GCACAGTTACACTTCTATTACCTCCCACTTGTGTACTATAGATTTAAAATGCTTAAGACCCTGTCCTCTTaGACAGTCTGTTGTATAAAT | + |
|
Preference number: 5 (lower is better) Translates to: AQLHFYYLPLVYYRFKMLKTLSS*TVCCIN Trigger: ATTTATACAACAGACTGTCAAAGAGGACAGGGTCTT...AAGCATTTTAAATCTATAGTACACAAGTGGGAGGTAATAGAAGTGTAACTGTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS-3UTR CAA 90 bp | GCACAGTTACACTTCTATTACCTCCCACTTGTGTACTATAGATTTAAAATGCTTAGCTGGAATAAGCGATaGTTACTTGCTTTAAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: AQLHFYYLPLVYYRFKMLSWNKR*LLALKP Trigger: TGGTTTTAAAGCAAGTAACAATCGCTTATTCCAGCT...AAGCATTTTAAATCTATAGTACACAAGTGGGAGGTAATAGAAGTGTAACTGTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS CAA 90 bp | AAGGAGAGATCCTGGGTGTGCCATCTGCACTGGATCACCTTGTCCTaGTGCTCCCCCACCACCATGAGAGGAAGCTGCTTGGTGAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: KERSWVCHLHWITLS*CSPTTMRGSCLVRS Trigger: GGACCTCACCAAGCAGCTTCCTCTCATGGTGGTGGGGGAGCACAAGGACAAGGTGATCCAGTGCAGATGGCACACCCAGGATCTCTCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS CAA 90 bp | GAGAGGAAGGAGAGATCCTGGGTGTGCCATCTGCACTGGATCACCTaGTCCTTGTGCTCCCCCACCACCATGAGAGGAAGCTGCTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ERKERSWVCHLHWIT*SLCSPTTMRGSCLV Trigger: CACCAAGCAGCTTCCTCTCATGGTGGTGGGGGAGCACAAGGACAAGGTGATCCAGTGCAGATGGCACACCCAGGATCTCTCCTTCCTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS CCA 72 bp | GAGAGGAAGGAGAGATCCTGGGTGTGCCATCTGCACTaGATCACCTTGTCCTTGTGCTCCCCCACCACCATG | + |
|
Preference number: 6 (lower is better) Translates to: ERKERSWVCHLH*ITLSLCSPTTM Trigger: CATGGTGGTGGGGGAGCACAAGGACAAGGTGATCCAGTGCAGATGGCACACCCAGGATCTCTCCTTCCTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS CAA 72 bp | GAGAGATCCTGGGTGTGCCATCTGCACTGGATCACCTaGTCCTTGTGCTCCCCCACCACCATGAGAGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: ERSWVCHLHWIT*SLCSPTTMRGS Trigger: GCTTCCTCTCATGGTGGTGGGGGAGCACAAGGACAAGGTGATCCAGTGCAGATGGCACACCCAGGATCTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS GCA 72 bp | TTGTCCTTGTGCTCCCCCACCACCATGAGAGGAAGCTaGTTGGTGAGGTCCCCTTGCAGGTCTGTCACCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSLCSPTTMRGS*LVRSPCRSVTF Trigger: AAAGGTGACAGACCTGCAAGGGGACCTCACCAAGCAGCTTCCTCTCATGGTGGTGGGGGAGCACAAGGACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
||
| CDS TCA 72 bp | CCTCTTATGTCGTACAGCATGCAGCTAGAGTCCTCCTaGCCTGTAGCTAAGAGACGGCCACTGGGGTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: PLMSYSMQLESS*PVAKRRPLGST Trigger: TGTGGACCCCAGTGGCCGTCTCTTAGCTACAGGTCAGGAGGACTCTAGCTGCATGCTGTACGACATAAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS TCA 72 bp | GTAAGTCCAGAGGGTCACAGTTCTGTCCGCAGAGGATaGGAGGAAGGAGAGATCCTGGGTGTGCCATCTGCA | + |
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Preference number: 6 (lower is better) Translates to: VSPEGHSSVRRG*EEGEILGVPSA Trigger: TGCAGATGGCACACCCAGGATCTCTCCTTCCTCTCATCCTCTGCGGACAGAACTGTGACCCTCTGGACTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS GCA 72 bp | TTCACGCCTCCTTCAAGTAACATCTGCTGGTACATCTaGCGCTGTTGCTCCTTCTGTTCTAGGTGCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: FTPPSSNICWYI*RCCSFCSRCCW Trigger: CCAGCAGCACCTAGAACAGAAGGAGCAACAGCGGCAGATGTACCAGCAGATGTTACTTGAAGGAGGCGTGAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS CAA 72 bp | CCACAGATGCCACTGCACTGCCAGTTCCATGGAATGTaGTGCCAACCACACGAACACAGCTTGGTACACGAA | + |
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Preference number: 6 (lower is better) Translates to: PQMPLHCQFHGM*CQPHEHSLVHE Trigger: TTCGTGTACCAAGCTGTGTTCGTGTGGTTGGCACAACATTCCATGGAACTGGCAGTGCAGTGGCATCTGTGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS GCA 72 bp | CCATCCTCTTGGTTCACGCCTCCTTCAAGTAACATCTaGTGGTACATCTGCCGCTGTTGCTCCTTCTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: PSSWFTPPSSNI*WYICRCCSFCS Trigger: AGAACAGAAGGAGCAACAGCGGCAGATGTACCAGCAGATGTTACTTGAAGGAGGCGTGAACCAAGAGGATGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS CCA 72 bp | TCCTCTTGGTTCACGCCTCCTTCAAGTAACATCTGCTaGTACATCTGCCGCTGTTGCTCCTTCTGTTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: SSWFTPPSSNIC*YICRCCSFCSR Trigger: CCTAGAACAGAAGGAGCAACAGCGGCAGATGTACCAGCAGATGTTACTTGAAGGAGGCGTGAACCAAGAGGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS GCA 72 bp | AACCATGACACAGACCTCTTCAAAGCAGTGAACTCGTaGAGTGCTGGGATTCCAGTCCTTAAACTCAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: NHDTDLFKAVNS*SAGIPVLKLSV Trigger: CACGCTGAGTTTAAGGACTGGAATCCCAGCACTGCACGAGTTCACTGCTTTGAAGAGGTCTGTGTCATGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS CCA 72 bp | GGTACACGAAGATCCCAGAATCTAACAGTCTTATCCTaGGAACCAGACGCAATCATCCACCCACTCCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: GTRRSQNLTVLS*EPDAIIHPLQV Trigger: TACCTGGAGTGGGTGGATGATTGCGTCTGGTTCCCAGGATAAGACTGTTAGATTCTGGGATCTTCGTGTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS TCA 72 bp | AACTCTGCAACCATGACACAGACCTCTTCAAAGCAGTaGACTCGTGCAGTGCTGGGATTCCAGTCCTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: NSATMTQTSSKQ*TRAVLGFQSLN Trigger: GTTTAAGGACTGGAATCCCAGCACTGCACGAGTTCACTGCTTTGAAGAGGTCTGTGTCATGGTTGCAGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS CAA 90 bp | TGGGGTGGTGTACTGAAACTAGTCACAGAGGAATTATTTGATCCATaGTTTTTGCTCCCGCTGCATTGCTGGTTGAGCACTGGCACCTCA | + |
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Preference number: 6 (lower is better) Translates to: WGGVLKLVTEELFDP*FLLPLHCWLSTGTS Trigger: TGAGGTGCCAGTGCTCAACCAGCAATGCAGCGGGAGCAAAAACAATGGATCAAATAATTCCTCTGTGACTAGTTTCAGTACACCACCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS TCA 72 bp | TTGATCCATTGTTTTTGCTCCCGCTGCATTGCTGGTTaGGCACTGGCACCTCATTACCAAGACTATCCATTC | + |
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Preference number: 6 (lower is better) Translates to: LIHCFCSRCIAG*ALAPHYQDYPF Trigger: GAATGGATAGTCTTGGTAATGAGGTGCCAGTGCTCAACCAGCAATGCAGCGGGAGCAAAAACAATGGATCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS CAA 90 bp | GGTGTACTGAAACTAGTCACAGAGGAATTATTTGATCCATTGTTTTaGCTCCCGCTGCATTGCTGGTTGAGCACTGGCACCTCATTACCA | + |
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Preference number: 6 (lower is better) Translates to: GVLKLVTEELFDPLF*LPLHCWLSTGTSLP Trigger: TGGTAATGAGGTGCCAGTGCTCAACCAGCAATGCAGCGGGAGCAAAAACAATGGATCAAATAATTCCTCTGTGACTAGTTTCAGTACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS CCA 72 bp | TTATTTGATCCATTGTTTTTGCTCCCGCTGCATTGCTaGTTGAGCACTGGCACCTCATTACCAAGACTATCC | + |
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Preference number: 6 (lower is better) Translates to: LFDPLFLLPLHC*LSTGTSLPRLS Trigger: GGATAGTCTTGGTAATGAGGTGCCAGTGCTCAACCAGCAATGCAGCGGGAGCAAAAACAATGGATCAAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS CCA 72 bp | TCCATGGAATGTTGTGCCAACCACACGAACACAGCTTaGTACACGAAGATCCCAGAATCTAACAGTCTTATC | + |
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Preference number: 6 (lower is better) Translates to: SMECCANHTNTA*YTKIPESNSLI Trigger: GATAAGACTGTTAGATTCTGGGATCTTCGTGTACCAAGCTGTGTTCGTGTGGTTGGCACAACATTCCATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS CAA 72 bp | TTTGATCCATTGTTTTTGCTCCCGCTGCATTGCTGGTaGAGCACTGGCACCTCATTACCAAGACTATCCATT | + |
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Preference number: 6 (lower is better) Translates to: FDPLFLLPLHCW*STGTSLPRLSI Trigger: AATGGATAGTCTTGGTAATGAGGTGCCAGTGCTCAACCAGCAATGCAGCGGGAGCAAAAACAATGGATCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS CAA 72 bp | AAACTAGTCACAGAGGAATTATTTGATCCATTGTTTTaGCTCCCGCTGCATTGCTGGTTGAGCACTGGCACC | + |
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Preference number: 6 (lower is better) Translates to: KLVTEELFDPLF*LPLHCWLSTGT Trigger: GGTGCCAGTGCTCAACCAGCAATGCAGCGGGAGCAAAAACAATGGATCAAATAATTCCTCTGTGACTAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS CAA 72 bp | AGGGCAGCACTTTTACATATTTGTCATTTGATCCTGTaGCTAACAACTGTCCACACGGACTCCAAGCCACAC | + |
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Preference number: 6 (lower is better) Translates to: RAALLHICHLIL*LTTVHTDSKPH Trigger: GTGTGGCTTGGAGTCCGTGTGGACAGTTGTTAGCAACAGGATCAAATGACAAATATGTAAAAGTGCTGCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS CAA 90 bp | TCTGGCTTCCACAAGGTGAGTCTTCATGAAAAGGGATGTGATTCGTaGATCCAGGATTACGAGGAGTGCTTGTGTGAATATTGGCAGTAT | + |
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Preference number: 6 (lower is better) Translates to: SGFHKVSLHEKGCDS*IQDYEECLCEYWQY Trigger: ATACTGCCAATATTCACACAAGCACTCCTCGTAATCCTGGATCAACGAATCACATCCCTTTTCATGAAGACTCACCTTGTGGAAGCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS TCA 72 bp | GAAGTTTTGTTCCCAAGATCTGAGATCCTCTTATCATaGCTGGTTAACCCACATGTGAGGCCATCCAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: EVLFPRSEILLS*LVNPHVRPSKA Trigger: TGCTTTGGATGGCCTCACATGTGGGTTAACCAGTCATGATAAGAGGATCTCAGATCTTGGGAACAAAACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS TCA 72 bp | GGGTGGTGTACTGAAACTAGTCACAGAGGAATTATTTaGTCCATTGTTTTTGCTCCCGCTGCATTGCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: GWCTETSHRGII*SIVFAPAALLV Trigger: AACCAGCAATGCAGCGGGAGCAAAAACAATGGATCAAATAATTCCTCTGTGACTAGTTTCAGTACACCACCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS TCA 72 bp | GAATTTGAACCAACAGCATATAAACTACCACTTGGATaGAACGCCACGGCTCTAACAGCCTGTGTGTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: EFEPTAYKLPLG*NATALTACVSS Trigger: AGAAGACACACAGGCTGTTAGAGCCGTGGCGTTTCATCCAAGTGGTAGTTTATATGCTGTTGGTTCAAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS GCA 72 bp | GAATTATTTGATCCATTGTTTTTGCTCCCGCTGCATTaGTGGTTGAGCACTGGCACCTCATTACCAAGACTA | + |
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Preference number: 6 (lower is better) Translates to: ELFDPLFLLPLH*WLSTGTSLPRL Trigger: TAGTCTTGGTAATGAGGTGCCAGTGCTCAACCAGCAATGCAGCGGGAGCAAAAACAATGGATCAAATAATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS CCA 72 bp | ATTGTTTTTGCTCCCGCTGCATTGCTGGTTGAGCACTaGCACCTCATTACCAAGACTATCCATTCCAATATT | + |
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Preference number: 6 (lower is better) Translates to: IVFAPAALLVEH*HLITKTIHSNI Trigger: AATATTGGAATGGATAGTCTTGGTAATGAGGTGCCAGTGCTCAACCAGCAATGCAGCGGGAGCAAAAACAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS TCA 72 bp | ACTCCACTTTCCTTCTCCAGCGCCAGCATACTAATGTaGAGCTTCTTTGAATTCAAGAAGTCCAAAATCAGC | + |
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Preference number: 6 (lower is better) Translates to: TPLSFSSASILM*SFFEFKKSKIS Trigger: GCTGATTTTGGACTTCTTGAATTCAAAGAAGCTTCACATTAGTATGCTGGCGCTGGAGAAGGAAAGTGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051145.15 ENSMUST00000124731.3 |
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| CDS CAA 72 bp | GTACTGAAACTAGTCACAGAGGAATTATTTGATCCATaGTTTTTGCTCCCGCTGCATTGCTGGTTGAGCACT | + |
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Preference number: 6 (lower is better) Translates to: VLKLVTEELFDP*FLLPLHCWLST Trigger: AGTGCTCAACCAGCAATGCAGCGGGAGCAAAAACAATGGATCAAATAATTCCTCTGTGACTAGTTTCAGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS CAA 72 bp | CACAAGGTGAGTCTTCATGAAAAGGGATGTGATTCGTaGATCCAGGATTACGAGGAGTGCTTGTGTGAATAT | + |
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Preference number: 6 (lower is better) Translates to: HKVSLHEKGCDS*IQDYEECLCEY Trigger: ATATTCACACAAGCACTCCTCGTAATCCTGGATCAACGAATCACATCCCTTTTCATGAAGACTCACCTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS CAA 90 bp | GAGGAATTATTTGATCCATTGTTTTTGCTCCCGCTGCATTGCTGGTaGAGCACTGGCACCTCATTACCAAGACTATCCATTCCAATATTT | + |
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Preference number: 6 (lower is better) Translates to: EELFDPLFLLPLHCW*STGTSLPRLSIPIF Trigger: AAATATTGGAATGGATAGTCTTGGTAATGAGGTGCCAGTGCTCAACCAGCAATGCAGCGGGAGCAAAAACAATGGATCAAATAATTCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS CAA 90 bp | GTTGCATTACATGTCTCTGCATTGAAGGGCAGCACTTTTACATATTaGTCATTTGATCCTGTTGCTAACAACTGTCCACACGGACTCCAA | + |
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Preference number: 6 (lower is better) Translates to: VALHVSALKGSTFTY*SFDPVANNCPHGLQ Trigger: TTGGAGTCCGTGTGGACAGTTGTTAGCAACAGGATCAAATGACAAATATGTAAAAGTGCTGCCCTTCAATGCAGAGACATGTAATGCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS TCA 72 bp | CCAGATCTGGTCCTGTTGCATTACATGTCTCTGCATTaGAGGGCAGCACTTTTACATATTTGTCATTTGATC | + |
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Preference number: 6 (lower is better) Translates to: PDLVLLHYMSLH*RAALLHICHLI Trigger: GATCAAATGACAAATATGTAAAAGTGCTGCCCTTCAATGCAGAGACATGTAATGCAACAGGACCAGATCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS GCA 72 bp | AAGACAATAAACTTAGATCTAAATCGTCACAACCGTTaGCACATAACAGGTCGATGCCAAGAAGGACTTCAC | + |
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Preference number: 6 (lower is better) Translates to: KTINLDLNRHNR*HITGRCQEGLH Trigger: GTGAAGTCCTTCTTGGCATCGACCTGTTATGTGGCAACGGTTGTGACGATTTAGATCTAAGTTTATTGTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS GCA 72 bp | CAGTTTGCTGATAAGAGGAGTCAACAGATCAGCATATaGAGCTTTTGTAGGCTTCAGAAGTTTGTCAACATG | + |
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Preference number: 6 (lower is better) Translates to: QFADKRSQQISI*SFCRLQKFVNM Trigger: CATGTTGACAAACTTCTGAAGCCTACAAAAGCTGCATATGCTGATCTGTTGACTCCTCTTATCAGCAAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS GCA 72 bp | CCTTCCATAAATGCCAAATCTCGAATTGTCCCATCATaGATGCTAAATTCCAGATCTGGTCCTGTTGCATTA | + |
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Preference number: 6 (lower is better) Translates to: PSINAKSRIVPS*MLNSRSGPVAL Trigger: TAATGCAACAGGACCAGATCTGGAATTTAGCATGCATGATGGGACAATTCGAGATTTGGCATTTATGGAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS CAA 72 bp | CAAGACAATAAACTTAGATCTAAATCGTCACAACCGTaGCCACATAACAGGTCGATGCCAAGAAGGACTTCA | + |
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Preference number: 6 (lower is better) Translates to: QDNKLRSKSSQP*PHNRSMPRRTS Trigger: TGAAGTCCTTCTTGGCATCGACCTGTTATGTGGCAACGGTTGTGACGATTTAGATCTAAGTTTATTGTCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS CAA 72 bp | CATGTCTCTGCATTGAAGGGCAGCACTTTTACATATTaGTCATTTGATCCTGTTGCTAACAACTGTCCACAC | + |
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Preference number: 6 (lower is better) Translates to: HVSALKGSTFTY*SFDPVANNCPH Trigger: GTGTGGACAGTTGTTAGCAACAGGATCAAATGACAAATATGTAAAAGTGCTGCCCTTCAATGCAGAGACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS CAA 72 bp | TCAAAGCATGAAGACCCTGTCCTCTTTGACAGTCTGTaGTATAAATGTTACAATCTCCTGCTCCAGCACTTA | + |
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Preference number: 6 (lower is better) Translates to: SKHEDPVLFDSL*YKCYNLLLQHL Trigger: TAAGTGCTGGAGCAGGAGATTGTAACATTTATACAACAGACTGTCAAAGAGGACAGGGTCTTCATGCTTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS CCA 72 bp | TTGATCCAGGATTACGAGGAGTGCTTGTGTGAATATTaGCAGTATCATGTATTAACCTCTGACTGGAATCTT | + |
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Preference number: 6 (lower is better) Translates to: LIQDYEECLCEY*QYHVLTSDWNL Trigger: AAGATTCCAGTCAGAGGTTAATACATGATACTGCCAATATTCACACAAGCACTCCTCGTAATCCTGGATCAA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS CAA 72 bp | TCCAGATCTGGTCCTGTTGCATTACATGTCTCTGCATaGAAGGGCAGCACTTTTACATATTTGTCATTTGAT | + |
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Preference number: 6 (lower is better) Translates to: SRSGPVALHVSA*KGSTFTYLSFD Trigger: ATCAAATGACAAATATGTAAAAGTGCTGCCCTTCAATGCAGAGACATGTAATGCAACAGGACCAGATCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS GCA 72 bp | AAATTCCAGATCTGGTCCTGTTGCATTACATGTCTCTaGATTGAAGGGCAGCACTTTTACATATTTGTCATT | + |
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Preference number: 6 (lower is better) Translates to: KFQIWSCCITCL*IEGQHFYIFVI Trigger: AATGACAAATATGTAAAAGTGCTGCCCTTCAATGCAGAGACATGTAATGCAACAGGACCAGATCTGGAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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| CDS TCA 72 bp | TCAAATGCACAAGAAAAGACTGAAGAAGGGAGATTCTaGAGCCAAGACAATAAACTTAGATCTAAATCGTCA | + |
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Preference number: 6 (lower is better) Translates to: SNAQEKTEEGRF*SQDNKLRSKSS Trigger: TGACGATTTAGATCTAAGTTTATTGTCTTGGCTTCAGAATCTCCCTTCTTCAGTCTTTTCTTGTGCATTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051145.15 |
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