Pregenerated sensors for WDR46 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024312Ensembl transcript IDs: ENSMUST00000025170.11, ENSMUST00000234334.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGAACTGGGACACACGCCATCTAAGATGTCAGCTCGGATACAGCTaGGTGATAGGTAGGTTAGGGTGGGAGTCTGCTGTCCCTGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: QNWDTRHLRCQLGYS*VIGRLGWESAVPVG Trigger: TCCCACAGGGACAGCAGACTCCCACCCTAACCTACCTATCACTCAGCTGTATCCGAGCTGACATCTTAGATGGCGTGTGTCCCAGTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| 3UTR GCA 90 bp | AATCAGAATTCCATTATCCCACACAGGAAGCTGGTGCAGGAGGCTTaGTACATGTTCCAGGCCGGCTTGAAATATGGAGCAAGACAACAC | + |
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Preference number: 1 (lower is better) Translates to: NQNSIIPHRKLVQEA*YMFQAGLKYGARQH Trigger: GTGTTGTCTTGCTCCATATTTCAAGCCGGCCTGGAACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGATAATGGAATTCTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| 3UTR TCA 90 bp | AAGACACTTGTGTGTTTTCTCCTGCCAAACGTGTTTTCTGGGAACTaGACTCAAGTTTGGCATCAAGTGCCTTTGCCCACTGAGCACTCT | + |
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Preference number: 1 (lower is better) Translates to: KTLVCFLLPNVFSGN*TQVWHQVPLPTEHS Trigger: AGAGTGCTCAGTGGGCAAAGGCACTTGATGCCAAACTTGAGTTCAGTTCCCAGAAAACACGTTTGGCAGGAGAAAACACACAAGTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGCATCAAGTGCCTTTaGCCACTGAGCACTCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: VCVCVCVCVCVRAAPCGHGIKCL*PLSTLA Trigger: GGCCAGAGTGCTCAGTGGGCAAAGGCACTTGATGCC...ATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACACACACACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| 3UTR-3UTR CCA 90 bp | TTATCCCACACAGGAAGCTGGTGCAGGAGGCTTGCTACATGTTCCAGGCCGGCTCTCACATGGCACCCTTaGCAGGCTAGGCTCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: LSHTGSWCRRLATCSRPALTWHP*QARLWA Trigger: AGCCCAGAGCCTAGCCTGCCAAGGGTGCCATGTGAG...AGCCGGCCTGGAACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGATAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCCACACAGGAAGCTGGTGCAGGAGGCTTGCTACATGTTCCAGGCCGGCTTGGGAATGTCTGTTTGCTaGGTCTTTGTTCGCTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: IPHRKLVQEACYMFQAGLGMSVC*VFVRWC Trigger: ACACCAGCGAACAAAGACTCAGCAAACAGACATTCC...CAAGCCGGCCTGGAACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAATTCCATTATCCCACACAGGAAGCTGGTGCAGGAGGCTTGCTACATGTTGGCTCTGGGCTGAGCTaGGGACATGCGCATGAACCC | + |
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Preference number: 2 (lower is better) Translates to: SEFHYPTQEAGAGGLLHVGSGLS*GHAHEP Trigger: GGGTTCATGCGCATGTCCCCAGCTCAGCCCAGAGCC...AACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGATAATGGAATTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGTGGACGTGAGGGTAAGGTTGGAATGTCTGTTTGCTGAGTCTTTGTTCGCTGTTAGGGTGGGAGTCTaGTGTCCCTGTGGGAGGATG | + |
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Preference number: 2 (lower is better) Translates to: WVDVRVRLECLFAESLFAVRVGV*CPCGRM Trigger: CATCCTCCCACAGGGACAGCAGACTCCCACCCTAAC...AGCGAACAAAGACTCAGCAAACAGACATTCCAACCTTACCCTCACGTCCACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAATTCCATTATCCCACACAGGAAGCTGGTGCAGGAGGCTTGCTACATGTTCCTCCACCACTCACATaGCACCCTTGGCAGGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: SEFHYPTQEAGAGGLLHVPPPLT*HPWQAR Trigger: CCTAGCCTGCCAAGGGTGCCATGTGAGTGGTGGAGG...AACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGATAATGGAATTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGGTGTTTTCTGGGAACTaGACTCAAGTTTGGCATCAA | + |
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Preference number: 2 (lower is better) Translates to: CVCVCVCVCALPHVGMERVFSGN*TQVWHQ Trigger: TTGATGCCAAACTTGAGTTCAGTTCCCAGAAAACAC...CCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| 3UTR-3UTR CCA 90 bp | GTCTGTTTGCTGAGTCTTTGTTCGCTGGTGTCAGGCGTTTTAATGCAGATTTCATGGCAGGCTAGGCTCTaGGCTGAGCTGGGGACATGC | + |
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Preference number: 2 (lower is better) Translates to: VCLLSLCSLVSGVLMQISWQARL*AELGTC Trigger: GCATGTCCCCAGCTCAGCCCAGAGCCTAGCCTGCCA...TGAAATCTGCATTAAAACGCCTGACACCAGCGAACAAAGACTCAGCAAACAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| 3UTR-3UTR CCA 90 bp | AGAATTCCATTATCCCACACAGGAAGCTGGTGCAGGAGGCTTGCTACATGTTCCAGTCTGCTGTCCCTGTaGGAGGATGGACATTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: RIPLSHTGSWCRRLATCSSLLSL*EDGHSP Trigger: TGGGGAATGTCCATCCTCCCACAGGGACAGCAGACT...GGAACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGATAATGGAATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCCATTATCCCACACAGGAAGCTGGTGCAGGAGGCTTGCTACATGTTCCAGGAATGCAGATTTCAGGTaGAGAACTGGGACACACGCC | + |
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Preference number: 2 (lower is better) Translates to: IPLSHTGSWCRRLATCSRNADFR*RTGTHA Trigger: GGCGTGTGTCCCAGTTCTGCACCTGAAATCTGCATT...CCTGGAACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGATAATGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| 3UTR CAA 90 bp | GAATCAGAATTCCATTATCCCACACAGGAAGCTGGTGCAGGAGGCTaGCTACATGTTCCAGGCCGGCTTGAAATATGGAGCAAGACAACA | + |
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Preference number: 2 (lower is better) Translates to: ESEFHYPTQEAGAGG*LHVPGRLEIWSKTT Trigger: TGTTGTCTTGCTCCATATTTCAAGCCGGCCTGGAACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGATAATGGAATTCTGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| 3UTR CCA 72 bp | TCCCCAAGACCTAGCTCCTCCCCTCCACCACTCACATaGCACCCTTGGCAGGCTAGGCTCTGGGCTGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: SPRPSSSPPPLT*HPWQARLWAEL Trigger: CAGCTCAGCCCAGAGCCTAGCCTGCCAAGGGTGCCATGTGAGTGGTGGAGGGGAGGAGCTAGGTCTTGGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| 3UTR GCA 72 bp | TCCATTATCCCACACAGGAAGCTGGTGCAGGAGGCTTaGTACATGTTCCAGGCCGGCTTGAAATATGGAGCA | + |
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Preference number: 3 (lower is better) Translates to: SIIPHRKLVQEA*YMFQAGLKYGA Trigger: TGCTCCATATTTCAAGCCGGCCTGGAACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGATAATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| 3UTR CCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTaGGCATGGAAAGGTAAAAAGACACTTGTGTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVCARCPM*AWKGKKTLVCF Trigger: AAAACACACAAGTGTCTTTTTACCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACACACACACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| 3UTR TCA 72 bp | GTGTGTTTTCTCCTGCCAAACGTGTTTTCTGGGAACTaGACTCAAGTTTGGCATCAAGTGCCTTTGCCCACT | + |
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Preference number: 3 (lower is better) Translates to: VCFLLPNVFSGN*TQVWHQVPLPT Trigger: AGTGGGCAAAGGCACTTGATGCCAAACTTGAGTTCAGTTCCCAGAAAACACGTTTGGCAGGAGAAAACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS-3UTR GCA 90 bp | CACTCACATGGCACCCTTGGCAGGCTAGGCTCTGGGCTGAGCTGGGGACATGCGGGTCACAGCGGCGGATaGAGTGAAGCTCGATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: HSHGTLGRLGSGLSWGHAGHSGG*SEARCL Trigger: AAGGCATCGAGCTTCACTGCATCCGCCGCTGTGACC...CGCATGTCCCCAGCTCAGCCCAGAGCCTAGCCTGCCAAGGGTGCCATGTGAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGGCTGGCCTTGCCCTaGCCTGCCCATATGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVRAAPCGHGLALP*PAHMLT Trigger: GGTCAACATATGGGCAGGGCAGGGCAAGGCCAGCCC...ATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACACACACACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGAAGTGCCCTGCTCCCTaGGGCAAGGTCCGGGAACTC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVRAAPCGHGKKCPAP*GKVREL Trigger: GAGTTCCCGGACCTTGCCCCAGGGAGCAGGGCACTT...CTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGCCCGACAGCGTCCTCTaGGGCTTCTTCCAGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCALPHVGMERPDSVL*GFFQSG Trigger: TCCAGACTGGAAGAAGCCTCAGAGGACGCTGTCGGG...CCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGTAAAAAGACACTCGAGGGCAGCCACGTaGCCCCGACGCCCTCCTAAA | + |
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Preference number: 4 (lower is better) Translates to: VCVCVRAAPCGHGKVKRHSRAAT*PRRPPK Trigger: TTTAGGAGGGCGTCGGGGTCACGTGGCTGCCCTCGA...GTGTCTTTTTACCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS-3UTR GCA 90 bp | TTATCCCACACAGGAAGCTGGTGCAGGAGGCTTGCTACATGTTCCAGGCCGGCTGACTTCTGGGCGATGTaGGCGCTCTTGGACCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: LSHTGSWCRRLATCSRPADFWAM*ALLDLG Trigger: CCCGAGGTCCAAGAGCGCGCACATCGCCCAGAAGTC...AGCCGGCCTGGAACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGATAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGGTGAAGCCTCCACTGTaGCCCACCCCCAACACGTCT | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCALPHVGMERVKPPL*PTPNTS Trigger: AGACGTGTTGGGGGTGGGGCACAGTGGAGGCTTCAC...CCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS-3UTR CCA 90 bp | AGAATTCCATTATCCCACACAGGAAGCTGGTGCAGGAGGCTTGCTACATGTTCCGGCGGGGACGGGTCCTaGGAACGGGTCCTGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: RIPLSHTGSWCRRLATCSGGDGS*ERVLSP Trigger: GGGGCTCAGGACCCGTTCCCAGGACCCGTCCCCGCC...GGAACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGATAATGGAATTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| CDS-3UTR CCA 90 bp | CACTCACATGGCACCCTTGGCAGGCTAGGCTCTGGGCTGAGCTGGGGACATGCGAGCAGAGCCTCAGAATaGAGGAAGTGGATGTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: HSHGTLGRLGSGLSWGHASRASE*RKWMSR Trigger: ACGGGACATCCACTTCCTCCATTCTGAGGCTCTGCT...CGCATGTCCCCAGCTCAGCCCAGAGCCTAGCCTGCCAAGGGTGCCATGTGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| CDS-3UTR CCA 90 bp | CACTCACATGGCACCCTTGGCAGGCTAGGCTCTGGGCTGAGCTGGGGACATGCGCAGAATCTTCGCCAGTaGCTCCTTCACTGCTGGACT | + |
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Preference number: 4 (lower is better) Translates to: HSHGTLGRLGSGLSWGHAQNLRQ*LLHCWT Trigger: AGTCCAGCAGTGAAGGAGCCACTGGCGAAGATTCTG...CGCATGTCCCCAGCTCAGCCCAGAGCCTAGCCTGCCAAGGGTGCCATGTGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGCCCTGCCCATATGTTaGCCACATCACCCATTCCCG | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCALPHVGMALPIC*PHHPFP Trigger: CGGGAATGGGTGATGTGGTCAACATATGGGCAGGGC...CATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACACACACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGTCTGCTGCTCCAGAGTaGCCACATCCACCTCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVRAAPCGHGKSAAPE*PHPPLP Trigger: TGGCAGAGGTGGATGTGGTCACTCTGGAGCAGCAGA...CTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGTAAAAAGACACGACTTCTGGGCGATGTaGGCGCTCTTGGACCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: VCVCVRAAPCGHGKVKRHDFWAM*ALLDLG Trigger: CCCGAGGTCCAAGAGCGCGCACATCGCCCAGAAGTC...GTGTCTTTTTACCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGGTCACAGCGGCGGATaGAGTGAAGCTCGATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCALPHVGMGHSGG*SEARCL Trigger: AAGGCATCGAGCTTCACTGCATCCGCCGCTGTGACC...CATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACACACACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGTGCCTGTAGAATCTACTaGCACAGCACGCACCCCACC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCARCPMWAWKGACRIY*HSTHPT Trigger: GGTGGGGTGCGTGCTGTGGCAGTAGATTCTACAGGC...ACCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGTTCAAAGGGGCAGAACTaGAGCCCATGCACGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCARCPMWAWKGSKGQN*SPCTWP Trigger: AGGCCACGTGCATGGGCTCCAGTTCTGCCCCTTTGA...ACCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS-3UTR TCA 90 bp | TCCATTATCCCACACAGGAAGCTGGTGCAGGAGGCTTGCTACATGTTCCAGGCCCAGCGGCGGATGCAGTaGAGCTCGATGCCTTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: SIIPHRKLVQEACYMFQAQRRMQ*SSMPWL Trigger: CAACCAAGGCATCGAGCTTCACTGCATCCGCCGCTG...GGCCTGGAACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGATAATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| CDS-3UTR TCA 90 bp | TCCATTATCCCACACAGGAAGCTGGTGCAGGAGGCTTGCTACATGTTCCAGGCCCGCACCCCACCACGGTaGCACAGAATCTTCGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: SIIPHRKLVQEACYMFQARTPPR*HRIFAS Trigger: ACTGGCGAAGATTCTGTGTCACCGTGGTGGGGTGCG...GGCCTGGAACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGATAATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGTAAAAAGAAAAGGCCAAGTGCCCTaGTCCCTGGGGCAAGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVRAAPCGHGKVKRKGQVP*SLGQGP Trigger: CGGACCTTGCCCCAGGGAGCAGGGCACTTGGCCTTT...TCTTTTTACCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGTAAAAAGACAGAACTGGAGCCCATaGACGTGGCCTGAGAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVRAAPCGHGKVKRQNWSP*TWPESR Trigger: CCGGCTCTCAGGCCACGTGCATGGGCTCCAGTTCTG...TCTTTTTACCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGTTCTTCTGCTGCTGCTaGTCAAGGCTCTGCCGGACT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVRAAPCGHGKFFCCC*SRLCRT Trigger: AGTCCGGCAGAGCCTTGAGCAGCAGCAGCAGAAGAA...CTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGCTGAAAGGCAGCCTTaGCGTCTGGATCATAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVRAAPCGHAERQP*RLDHSP Trigger: TGGGCTATGATCCAGACGCCAAGGCTGCCTTTCAGC...ATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACACACACACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS-3UTR TCA 90 bp | TTCCATTATCCCACACAGGAAGCTGGTGCAGGAGGCTTGCTACATGTTCCAGGCCCCGACAGCGTCCTCTaGGGCTTCTTCCAGTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: FHYPTQEAGAGGLLHVPGPDSVL*GFFQSG Trigger: TCCAGACTGGAAGAAGCCTCAGAGGACGCTGTCGGG...GCCTGGAACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGATAATGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| CDS-3UTR TCA 90 bp | TTATCCCACACAGGAAGCTGGTGCAGGAGGCTTGCTACATGTTCCAGGCCGGCTCACGATCTTCCCCACTaGCACATCCAGGTAGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LSHTGSWCRRLATCSRPAHDLPH*HIQVGQ Trigger: CTGACCTACCTGGATGTGTCAGTGGGGAAGATCGTG...AGCCGGCCTGGAACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGCTTGCCTCTTCCTCTTaGGCTTCAGCCTTCTCGAGT | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCVCALPHVGMERLASSS*ASAFSS Trigger: ACTCGAGAAGGCTGAAGCGCAAGAGGAAGAGGCAAG...CCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS-3UTR GCA 90 bp | TCCATTATCCCACACAGGAAGCTGGTGCAGGAGGCTTGCTACATGTTCCAGGCCGCGGTTCTGAGCGACTaGGAGCAGAGCCTCAGAATG | + |
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Preference number: 4 (lower is better) Translates to: SIIPHRKLVQEACYMFQAAVLSD*EQSLRM Trigger: CATTCTGAGGCTCTGCTCGCAGTCGCTCAGAACCGC...GGCCTGGAACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGATAATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| CDS-3UTR GCA 90 bp | TCCATTATCCCACACAGGAAGCTGGTGCAGGAGGCTTGCTACATGTTCCAGGCCGCCTGTAGAATCTACTaGCACAGCACGCACCCCACC | + |
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Preference number: 4 (lower is better) Translates to: SIIPHRKLVQEACYMFQAACRIY*HSTHPT Trigger: GGTGGGGTGCGTGCTGTGGCAGTAGATTCTACAGGC...GGCCTGGAACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGATAATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATTCAGGTCAAAGTGCTTaGCAGCACTGGCGATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVRAAPCGHSGQSA*QHWRCP Trigger: TGGACATCGCCAGTGCTGCCAAGCACTTTGACCTGA...ATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACACACACACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATAGCAGAGCCTCAGAATaGAGGAAGTGGATGTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCVRAAPCGHSRASE*RKWMSR Trigger: ACGGGACATCCACTTCCTCCATTCTGAGGCTCTGCT...ATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACACACACACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGTGGGCTCCAGGAGGCATaGCCATATCCTGCTTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCARCPMWAWKGGLQEA*PYPAFS Trigger: AGAAAAAGCAGGATATGGCCATGCCTCCTGGAGCCC...ACCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGTAAAAAGACACCACGATCTTCCCCACTaGCACATCCAGGTAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVRAAPCGHGKVKRHHDLPH*HIQVGQ Trigger: CTGACCTACCTGGATGTGTCAGTGGGGAAGATCGTG...GTGTCTTTTTACCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR TCA 90 bp | CTGTCTGCTCCTACCCAGTTAAGATGTAAGGCACATGGGACAATTTCCCTATGGCCCATGCACGTGGCCTaGGAGCCGGTGGGTGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSAPTQLRCKAHGTISLWPMHVA*EPVGEV Trigger: TACCTCACCCACCGGCTCTCAGGCCACGTGCATGGG...CCATAGGGAAATTGTCCCATGTGCCTTACATCTTAACTGGGTAGGAGCAGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAGGGGGTTCAAACAAATaGGCTCTGCAGGTACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCVCALPHVGMEGGSNK*ALQVPS Trigger: AGAAGGTACCTGCAGAGCTCATTTGTTTGAACCCCC...TTCCATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACACACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGGTGGATGTCCCGTACTaGTTCCATGACGTTGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCALPHVGMERVDVPY*FHDVDL Trigger: GAGATCAACGTCATGGAAGCAGTACGGGACATCCAC...CCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGTAAAAAGAAGATCGGGGGCTTCTTaGAGAACCGGGACTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVRAAPCGHGKVKRRSGAS*RTGTSG Trigger: CCCAGAAGTCCCGGTTCTCCAAGAAGCCCCCGATCT...TCTTTTTACCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACACACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGTAAAAAGACACCTGTCTCTGAAGTGGTaGCCAGGAGGAAGTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVRAAPCGHGKVKRHLSLKW*PGGSGR Trigger: CCTTCCACTTCCTCCTGGCCACCACTTCAGAGACAG...GTGTCTTTTTACCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGTAAAAAGACACACCCTGTCTCTGAAGTaGTGGCCAGGAGGAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVRAAPCGHGKVKRHTLSLK*WPGGSG Trigger: TCCACTTCCTCCTGGCCACCACTTCAGAGACAGGGT...GTGTCTTTTTACCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGTTCAAAGATCTTCAGCTaGTGGTCCAGACCAGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCARCPMWAWKGSKIFS*WSRPEV Trigger: CACCTCTGGTCTGGACCACCAGCTGAAGATCTTTGA...ACCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR CCA 90 bp | TTTTCTCCTGCCAAACGTGTTTTCTGGGAACTGAACTCAAGTTTGGCATCAAGTCCAGGGAGGGTGGGCTaGCCTTGCCCTGCCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSPAKRVFWELNSSLASSPGRVG*PCPALP Trigger: GGGCAGGGCAGGGCAAGGCCAGCCCACCCTCCCTGG...ACTTGATGCCAAACTTGAGTTCAGTTCCCAGAAAACACGTTTGGCAGGAGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGTTGTCCCTGTGCTCCTaGTCCATGACCTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCALPHVGMERLSLCS*SMTFFF Trigger: GAAGAAGAAGGTCATGGACCAGGAGCACAGGGACAA...CCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR GCA 90 bp | TTATCCCACACAGGAAGCTGGTGCAGGAGGCTTGCTACATGTTCCAGGCCGGCTGTGGATGTCCCGTACTaGTTCCATGACGTTGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSHTGSWCRRLATCSRPAVDVPY*FHDVDL Trigger: GAGATCAACGTCATGGAAGCAGTACGGGACATCCAC...AGCCGGCCTGGAACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
||
| CDS-3UTR CCA 90 bp | TTCCATTATCCCACACAGGAAGCTGGTGCAGGAGGCTTGCTACATGTTCCAGGCCTGTCTCTGAAGTGGTaGCCAGGAGGAAGTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FHYPTQEAGAGGLLHVPGLSLKW*PGGSGR Trigger: CCTTCCACTTCCTCCTGGCCACCACTTCAGAGACAG...GCCTGGAACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGATAATGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCTCCTGCCAAACGTGTTTTCTGGGAACTGAACTCAAGTTTGGCATCAAGTCTGCTCCAGGGAGGGTaGGCTGGCCTTGCCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSPAKRVFWELNSSLASSLLQGG*AGLALP Trigger: GGGCAGGGCAAGGCCAGCCCACCCTCCCTGGAGCAG...ACTTGATGCCAAACTTGAGTTCAGTTCCCAGAAAACACGTTTGGCAGGAGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR TCA 90 bp | GTCTGTTTGCTGAGTCTTTGTTCGCTGGTGTCAGGCGTTTTAATGCAGATTTCATCGAGGGCAGCCACGTaGCCCCGACGCCCTCCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VCLLSLCSLVSGVLMQISSRAAT*PRRPPK Trigger: TTTAGGAGGGCGTCGGGGTCACGTGGCTGCCCTCGA...TGAAATCTGCATTAAAACGCCTGACACCAGCGAACAAAGACTCAGCAAACAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
||
| CDS-3UTR CCA 90 bp | AGAATTCCATTATCCCACACAGGAAGCTGGTGCAGGAGGCTTGCTACATGTTCCAGATCGGGGGCTTCTTaGAGAACCGGGACTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RIPLSHTGSWCRRLATCSRSGAS*RTGTSG Trigger: CCCAGAAGTCCCGGTTCTCCAAGAAGCCCCCGATCT...GGAACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGATAATGGAATTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCACATGGGACAATTTCCCTATGGATCTTTGTGTTCCCTTTATATATGTGTGGCGGGGACGGGTCCTaGGAACGGGTCCTGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KAHGTISLWIFVFPLYMCGGDGS*ERVLSP Trigger: GGGGCTCAGGACCCGTTCCCAGGACCCGTCCCCGCC...ACACATATATAAAGGGAACACAAAGATCCATAGGGAAATTGTCCCATGTGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| 3UTR CAA 72 bp | TTCCATTATCCCACACAGGAAGCTGGTGCAGGAGGCTaGCTACATGTTCCAGGCCGGCTTGAAATATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FHYPTQEAGAGG*LHVPGRLEIWS Trigger: GCTCCATATTTCAAGCCGGCCTGGAACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGATAATGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGTAAAAAGACACTGTCTGCAGGATTTTTaGCGTGTCTTCCCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVRAAPCGHGKVKRHCLQDF*RVFPIF Trigger: GAAGATGGGGAAGACACGGCAAAAATCCTGCAGACA...GTGTCTTTTTACCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGTAAAAAGATGCTTTTTCTTCTGCTaGTGCTGCTCAAGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVRAAPCGHGKVKRCFFFC*CCSRLC Trigger: GCAGAGCCTTGAGCAGCAGCAGCAGAAGAAAAAGCA...TCTTTTTACCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACACACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR CCA 90 bp | CTGTCTGCTCCTACCCAGTTAAGATGTAAGGCACATGGGACAATTTCCCTATGGAGTGCTTGGCAGCACTaGCGATGTCCACAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSAPTQLRCKAHGTISLWSAWQH*RCPQPP Trigger: TGGAGGCTGTGGACATCGCCAGTGCTGCCAAGCACT...CCATAGGGAAATTGTCCCATGTGCCTTACATCTTAACTGGGTAGGAGCAGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR CCA 90 bp | TCAGAATTCCATTATCCCACACAGGAAGCTGGTGCAGGAGGCTTGCTACATGTTAGTGCTTGGCAGCACTaGCGATGTCCACAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SEFHYPTQEAGAGGLLHVSAWQH*RCPQPP Trigger: TGGAGGCTGTGGACATCGCCAGTGCTGCCAAGCACT...AACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGATAATGGAATTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCTCCTGCCAAACGTGTTTTCTGGGAACTGAACTCAAGTTTGGCATCAAGTTGGAGCCCATGCACGTaGCCTGAGAGCCGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSPAKRVFWELNSSLASSWSPCT*PESRWV Trigger: CACCCACCGGCTCTCAGGCCACGTGCATGGGCTCCA...ACTTGATGCCAAACTTGAGTTCAGTTCCCAGAAAACACGTTTGGCAGGAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR TCA 90 bp | GGCACATGGGACAATTTCCCTATGGATCTTTGTGTTCCCTTTATATATGTGTGTCAGCGCGGGCGGCTCTaGCGCTTGCCTCTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTWDNFPMDLCVPFIYVCQRGRL*RLPLPL Trigger: AAGAGGAAGAGGCAAGCGTCAGAGCCGCCCGCGCTG...ACACACATATATAAAGGGAACACAAAGATCCATAGGGAAATTGTCCCATGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR TCA 90 bp | AGACACTTGTGTGTTTTCTCCTGCCAAACGTGTTTTCTGGGAACTGAACTCAAGCAGCGGCGGATGCAGTaGAGCTCGATGCCTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RHLCVFSCQTCFLGTELKQRRMQ*SSMPWL Trigger: CAACCAAGGCATCGAGCTTCACTGCATCCGCCGCTG...CTTGAGTTCAGTTCCCAGAAAACACGTTTGGCAGGAGAAAACACACAAGTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR GCA 90 bp | TGGGTGGACGTGAGGGTAAGGTTGGAATGTCTGTTTGCTGAGTCTTTGTTCGCTCTTGCCTCTTCCTCTTaGGCTTCAGCCTTCTCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WVDVRVRLECLFAESLFALASSS*ASAFSS Trigger: ACTCGAGAAGGCTGAAGCGCAAGAGGAAGAGGCAAG...AGCGAACAAAGACTCAGCAAACAGACATTCCAACCTTACCCTCACGTCCACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGACGTGAGGGTAAGGTTGGAATGTCTGTTTGCTGAGTCTTTGTTCGCTTCAGGTCAAAGTGCTTaGCAGCACTGGCGATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WVDVRVRLECLFAESLFASGQSA*QHWRCP Trigger: TGGACATCGCCAGTGCTGCCAAGCACTTTGACCTGA...AGCGAACAAAGACTCAGCAAACAGACATTCCAACCTTACCCTCACGTCCACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCTCCTGCCAAACGTGTTTTCTGGGAACTGAACTCAAGTTTGGCATCAAGTCGCACCCCACCACGGTaGCACAGAATCTTCGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSPAKRVFWELNSSLASSRTPPR*HRIFAS Trigger: ACTGGCGAAGATTCTGTGTCACCGTGGTGGGGTGCG...ACTTGATGCCAAACTTGAGTTCAGTTCCCAGAAAACACGTTTGGCAGGAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR GCA 90 bp | TTGTGTGTTTTCTCCTGCCAAACGTGTTTTCTGGGAACTGAACTCAAGTTTGGCGGCCTTGCCCTGCCCTaGCCATATGTTGACCACATC | + |
|
Preference number: 4 (lower is better) Translates to: LCVFSCQTCFLGTELKFGGLALP*PYVDHI Trigger: GATGTGGTCAACATATGGGCAGGGCAGGGCAAGGCC...GCCAAACTTGAGTTCAGTTCCCAGAAAACACGTTTGGCAGGAGAAAACACACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR CCA 90 bp | TTGTGTGTTTTCTCCTGCCAAACGTGTTTTCTGGGAACTGAACTCAAGTTTGGCTTCGGCCCTTCTGCTTaGCCTTGGGCTGAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCVFSCQTCFLGTELKFGFGPSA*PWAERQ Trigger: CTGCCTTTCAGCCCAAGGCCAAGCAGAAGGGCCGAA...GCCAAACTTGAGTTCAGTTCCCAGAAAACACGTTTGGCAGGAGAAAACACACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR TCA 90 bp | AGGCACATGGGACAATTTCCCTATGGATCTTTGTGTTCCCTTTATATATGTGTGTGCTTGGCCTTGGGCTaGAAGGCAGCCTTGGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RHMGQFPYGSLCSLYICVCLALG*KAALAS Trigger: AGACGCCAAGGCTGCCTTTCAGCCCAAGGCCAAGCA...CACACATATATAAAGGGAACACAAAGATCCATAGGGAAATTGTCCCATGTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR GCA 90 bp | AGGCACATGGGACAATTTCCCTATGGATCTTTGTGTTCCCTTTATATATGTGTGGGCGGCTCTGACGCTTaGCTCTTCCTCTTGCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RHMGQFPYGSLCSLYICVGGSDA*LFLLRF Trigger: GAAGCGCAAGAGGAAGAGGCAAGCGTCAGAGCCGCC...CACACATATATAAAGGGAACACAAAGATCCATAGGGAAATTGTCCCATGTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR GCA 90 bp | TGGGTGGACGTGAGGGTAAGGTTGGAATGTCTGTTTGCTGAGTCTTTGTTCGCTTGTCTGCAGGATTTTTaGCGTGTCTTCCCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WVDVRVRLECLFAESLFACLQDF*RVFPIF Trigger: GAAGATGGGGAAGACACGGCAAAAATCCTGCAGACA...AGCGAACAAAGACTCAGCAAACAGACATTCCAACCTTACCCTCACGTCCACCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
||
| CDS-3UTR CCA 90 bp | GTCTGTTTGCTGAGTCTTTGTTCGCTGGTGTCAGGCGTTTTAATGCAGATTTCAACCCTGTCTCTGAAGTaGTGGCCAGGAGGAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VCLLSLCSLVSGVLMQISTLSLK*WPGGSG Trigger: TCCACTTCCTCCTGGCCACCACTTCAGAGACAGGGT...TGAAATCTGCATTAAAACGCCTGACACCAGCGAACAAAGACTCAGCAAACAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
||
| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGTAAAAAGATTCTCGAGTTTGCTTTaGGTTTTAGGCTTCGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVRAAPCGHGKVKRFSSLL*VLGFEC Trigger: ACATTCGAAGCCTAAAACTCAAAGCAAACTCGAGAA...TCTTTTTACCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACACACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR GCA 90 bp | AGGCACATGGGACAATTTCCCTATGGATCTTTGTGTTCCCTTTATATATGTGTGGCGGTTCTGAGCGACTaGGAGCAGAGCCTCAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: RHMGQFPYGSLCSLYICVAVLSD*EQSLRM Trigger: CATTCTGAGGCTCTGCTCGCAGTCGCTCAGAACCGC...CACACATATATAAAGGGAACACAAAGATCCATAGGGAAATTGTCCCATGTGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR GCA 90 bp | TGGGTGGACGTGAGGGTAAGGTTGGAATGTCTGTTTGCTGAGTCTTTGTTCGCTTCCATAAAGACACTGTaGCATTACTGTGTCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WVDVRVRLECLFAESLFASIKTL*HYCVPG Trigger: ACCTGGGACACAGTAATGGCACAGTGTCTTTATGGA...AGCGAACAAAGACTCAGCAAACAGACATTCCAACCTTACCCTCACGTCCACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
||
| CDS-3UTR CCA 90 bp | TTGTGTGTTTTCTCCTGCCAAACGTGTTTTCTGGGAACTGAACTCAAGTTTGGCGCGGTTTCTTCCTCTTaGCCTGAGGCTTGTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCVFSCQTCFLGTELKFGAVSSS*PEACLS Trigger: AGAGAGACAAGCCTCAGGCCAAGAGGAAGAAACCGC...GCCAAACTTGAGTTCAGTTCCCAGAAAACACGTTTGGCAGGAGAAAACACACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR CCA 90 bp | AGACACTTGTGTGTTTTCTCCTGCCAAACGTGTTTTCTGGGAACTGAACTCAAGCAGAATCTTCGCCAGTaGCTCCTTCACTGCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: RHLCVFSCQTCFLGTELKQNLRQ*LLHCWT Trigger: AGTCCAGCAGTGAAGGAGCCACTGGCGAAGATTCTG...CTTGAGTTCAGTTCCCAGAAAACACGTTTGGCAGGAGAAAACACACAAGTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR CCA 90 bp | AGGCACATGGGACAATTTCCCTATGGATCTTTGTGTTCCCTTTATATATGTGTGCGGGAACTCAGGGGCTaGAATGTCCCTCGCAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RHMGQFPYGSLCSLYICVRELRG*NVPRKS Trigger: TGACTTGCGAGGGACATTCCAGCCCCTGAGTTCCCG...CACACATATATAAAGGGAACACAAAGATCCATAGGGAAATTGTCCCATGTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR CCA 90 bp | GGCACATGGGACAATTTCCCTATGGATCTTTGTGTTCCCTTTATATATGTGTGTCCTTCTGCTTGGCCTTaGGCTGAAAGGCAGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GTWDNFPMDLCVPFIYVCPSAWP*AERQPW Trigger: CCAAGGCTGCCTTTCAGCCCAAGGCCAAGCAGAAGG...ACACACATATATAAAGGGAACACAAAGATCCATAGGGAAATTGTCCCATGTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR GCA 90 bp | AGGCACATGGGACAATTTCCCTATGGATCTTTGTGTTCCCTTTATATATGTGTGCGGACTTTGTCCCTGTaGTCCTGGTCCATGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RHMGQFPYGSLCSLYICVRTLSL*SWSMTF Trigger: GAAGGTCATGGACCAGGAGCACAGGGACAAAGTCCG...CACACATATATAAAGGGAACACAAAGATCCATAGGGAAATTGTCCCATGTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS-3UTR TCA 90 bp | TGGGTGGACGTGAGGGTAAGGTTGGAATGTCTGTTTGCTGAGTCTTTGTTCGCTTTCTCGAGTTTGCTTTaGGTTTTAGGCTTCGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: WVDVRVRLECLFAESLFAFSSLL*VLGFEC Trigger: ACATTCGAAGCCTAAAACTCAAAGCAAACTCGAGAA...AGCGAACAAAGACTCAGCAAACAGACATTCCAACCTTACCCTCACGTCCACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
||
| CDS-3UTR GCA 90 bp | AGGCACATGGGACAATTTCCCTATGGATCTTTGTGTTCCCTTTATATATGTGTGTTTTTCTTCTGCTGCTaGTGCTCAAGGCTCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RHMGQFPYGSLCSLYICVFFFCC*CSRLCR Trigger: CCGGCAGAGCCTTGAGCAGCAGCAGCAGAAGAAAAA...CACACATATATAAAGGGAACACAAAGATCCATAGGGAAATTGTCCCATGTGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| 3UTR CAA 72 bp | GTGAGGGTAAGGTTGGAATGTCTGTTTGCTGAGTCTTaGTTCGCTGGTGTCAGGCGTTTTAATGCAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VRVRLECLFAES*FAGVRRFNADF Trigger: GAAATCTGCATTAAAACGCCTGACACCAGCGAACAAAGACTCAGCAAACAGACATTCCAACCTTACCCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| CDS-3UTR GCA 90 bp | AAGGCACATGGGACAATTTCCCTATGGATCTTTGTGTTCCCTTTATATATGTGTGGCATGGCCATATCCTaGTTTTTCTTCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KAHGTISLWIFVFPLYMCGMAIS*FFFCCC Trigger: GCAGCAGCAGAAGAAAAAGCAGGATATGGCCATGCC...ACACATATATAAAGGGAACACAAAGATCCATAGGGAAATTGTCCCATGTGCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS-3UTR GCA 90 bp | GGCACATGGGACAATTTCCCTATGGATCTTTGTGTTCCCTTTATATATGTGTGTTCCATAAAGACACTGTaGCATTACTGTGTCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTWDNFPMDLCVPFIYVCSIKTL*HYCVPG Trigger: ACCTGGGACACAGTAATGGCACAGTGTCTTTATGGA...ACACACATATATAAAGGGAACACAAAGATCCATAGGGAAATTGTCCCATGTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS TCA 90 bp | AGGGGCAGAACTGGAGCCCATGCACGTGGCCTGAGAGCCGGTGGGTaGGGTAGGGCTGCTCCAGGGAGGGTGGGCTGGCCTTGCCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RGRTGAHARGLRAGG*GRAAPGRVGWPCPA Trigger: GGCAGGGCAAGGCCAGCCCACCCTCCCTGGAGCAGCCCTACCTCACCCACCGGCTCTCAGGCCACGTGCATGGGCTCCAGTTCTGCCCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS CCA 90 bp | GAGGCTTCTTCCAGTCTGGAGCGGTCTTTGAGATCGGGGGCTTCTTaGAGAACCGGGACTTCTGGGCGATGTGCGCGCTCTTGGACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: EASSSLERSLRSGAS*RTGTSGRCARSWTS Trigger: CGAGGTCCAAGAGCGCGCACATCGCCCAGAAGTCCCGGTTCTCCAAGAAGCCCCCGATCTCAAAGACCGCTCCAGACTGGAAGAAGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
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| CDS CCA 90 bp | GCCAAGTGCCCTGCTCCCTGGGGCAAGGTCCGGGAACTCAGGGGCTaGAATGTCCCTCGCAAGTCAAAGATCTTCAGCTGGTGGTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AKCPAPWGKVRELRG*NVPRKSKIFSWWSR Trigger: TCTGGACCACCAGCTGAAGATCTTTGACTTGCGAGGGACATTCCAGCCCCTGAGTTCCCGGACCTTGCCCCAGGGAGCAGGGCACTTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGAGGCTCTGCCGGACTTaGTCCCTGTGCTCCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCVCALPHVGMERRLCRT*SLCSWS Trigger: GGACCAGGAGCACAGGGACAAAGTCCGGCAGAGCCT...CCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS TCA 90 bp | ATCTCACACATGAGCTTCTTGGTCACCCAGTCGAGGGCAGCCACGTaGCCCCGACGCCCTCCTAAAGCCAGGTGTCTCCCTGTTCGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ISHMSFLVTQSRAAT*PRRPPKARCLPVRE Trigger: CTCTCGAACAGGGAGACACCTGGCTTTAGGAGGGCGTCGGGGTCACGTGGCTGCCCTCGACTGGGTGACCAAGAAGCTCATGTGTGAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
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| CDS GCA 90 bp | CGGGCTCCAGGAGGCATGGCCATATCCTGCTTTTTCTTCTGCTGCTaGTGCTCAAGGCTCTGCCGGACTTTGTCCCTGTGCTCCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RAPGGMAISCFFFCC*CSRLCRTLSLCSWS Trigger: GGACCAGGAGCACAGGGACAAAGTCCGGCAGAGCCTTGAGCAGCAGCAGCAGAAGAAAAAGCAGGATATGGCCATGCCTCCTGGAGCCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS GCA 90 bp | GAGGGACGGGCTCCAGGAGGCATGGCCATATCCTGCTTTTTCTTCTaGTGCTGCTGCTCAAGGCTCTGCCGGACTTTGTCCCTGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EGRAPGGMAISCFFF*CCCSRLCRTLSLCS Trigger: GGAGCACAGGGACAAAGTCCGGCAGAGCCTTGAGCAGCAGCAGCAGAAGAAAAAGCAGGATATGGCCATGCCTCCTGGAGCCCGTCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS CCA 90 bp | CAGGGCCTTCACCTCCCATTCCTGGCGCTGCTTCCGGCTCCGGTATaGGTTATTCTCCAAACCATCAAAGTTAGGCTCCGCAGCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QGLHLPFLALLPAPV*VILQTIKVRLRSPR Trigger: CCTGGGGCTGCGGAGCCTAACTTTGATGGTTTGGAGAATAACCCATACCGGAGCCGGAAGCAGCGCCAGGAATGGGAGGTGAAGGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS GCA 90 bp | CAAGCCGGGTCACTCGGTCACAGCGGCGGATGCAGTGAAGCTCGATaGCTTGGTTGTCGTAGATATAAAGCCAGCGGTTCTGAGCGACTG | + |
|
Preference number: 5 (lower is better) Translates to: QAGSLGHSGGCSEAR*LGCRRYKASGSERL Trigger: CAGTCGCTCAGAACCGCTGGCTTTATATCTACGACAACCAAGGCATCGAGCTTCACTGCATCCGCCGCTGTGACCGAGTGACCCGGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
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| CDS GCA 90 bp | GGAAGGGGAGGAACTCAAGCCGGGTCACTCGGTCACAGCGGCGGATaGAGTGAAGCTCGATGCCTTGGTTGTCGTAGATATAAAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRGGTQAGSLGHSGG*SEARCLGCRRYKAS Trigger: GCTGGCTTTATATCTACGACAACCAAGGCATCGAGCTTCACTGCATCCGCCGCTGTGACCGAGTGACCCGGCTTGAGTTCCTCCCCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
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| CDS GCA 90 bp | GCTCCAGGAGGCATGGCCATATCCTGCTTTTTCTTCTGCTGCTGCTaGTCAAGGCTCTGCCGGACTTTGTCCCTGTGCTCCTGGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: APGGMAISCFFFCCC*SRLCRTLSLCSWSM Trigger: CATGGACCAGGAGCACAGGGACAAAGTCCGGCAGAGCCTTGAGCAGCAGCAGCAGAAGAAAAAGCAGGATATGGCCATGCCTCCTGGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS-3UTR CAA 90 bp | GATGGACATTCCCCAAGACCTAGCTCCTCCCCTCCACCACTCACATGGCACCCTTCACACATGAGCTTCTaGGTCACCCAGTCGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: DGHSPRPSSSPPPLTWHPSHMSF*VTQSRA Trigger: TGCCCTCGACTGGGTGACCAAGAAGCTCATGTGTGA...AGGGTGCCATGTGAGTGGTGGAGGGGAGGAGCTAGGTCTTGGGGAATGTCCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTGCCCCATGTGGGCATGGAAAGGTTGCCCTGCCCATATGTaGACCACATCACCCATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCARCPMWAWKGCPAHM*TTSPIP Trigger: GGGAATGGGTGATGTGGTCAACATATGGGCAGGGCA...ACCTTTCCATGCCCACATGGGGCAGCGCGCACACACACACACACACACACACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS GCA 90 bp | TATCCGCTCCTTCTTCTGCTGCTCCAGAGTGACCACATCCACCTCTaGCAGGGCTCGGGGGTTCAAACAAATGAGCTCTGCAGGTACCTT | + |
|
Preference number: 5 (lower is better) Translates to: YPLLLLLLQSDHIHL*QGSGVQTNELCRYL Trigger: AAGGTACCTGCAGAGCTCATTTGTTTGAACCCCCGAGCCCTGGCAGAGGTGGATGTGGTCACTCTGGAGCAGCAGAAGAAGGAGCGGATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS GCA 90 bp | ACTGGCGATGTCCACAGCCTCCACGATGTCTGTCTGCAGGATTTTTaGCGTGTCTTCCCCATCTTCTCCTACCAGAAACCCAGGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TGDVHSLHDVCLQDF*RVFPIFSYQKPRFL Trigger: GAGGAACCTGGGTTTCTGGTAGGAGAAGATGGGGAAGACACGGCAAAAATCCTGCAGACAGACATCGTGGAGGCTGTGGACATCGCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
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| CDS GCA 90 bp | TGCTTGGCAGCACTGGCGATGTCCACAGCCTCCACGATGTCTGTCTaGAGGATTTTTGCCGTGTCTTCCCCATCTTCTCCTACCAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: CLAALAMSTASTMSV*RIFAVSSPSSPTRN Trigger: GTTTCTGGTAGGAGAAGATGGGGAAGACACGGCAAAAATCCTGCAGACAGACATCGTGGAGGCTGTGGACATCGCCAGTGCTGCCAAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
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| CDS GCA 90 bp | GACTGCGAGCAGAGCCTCAGAATGGAGGAAGTGGATGTCCCGTACTaGTTCCATGACGTTGATCTCACACATGAGCTTCTTGGTCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: DCEQSLRMEEVDVPY*FHDVDLTHELLGHP Trigger: TGGGTGACCAAGAAGCTCATGTGTGAGATCAACGTCATGGAAGCAGTACGGGACATCCACTTCCTCCATTCTGAGGCTCTGCTCGCAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
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| CDS-3UTR CAA 90 bp | TTATCCCACACAGGAAGCTGGTGCAGGAGGCTTGCTACATGTTCCAGGCCGGCTAGAGTTGAGTTCAGGTaGGAGAAATTTGTGCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LSHTGSWCRRLATCSRPARVEFR*EKFVPV Trigger: TACAGGCACAAATTTCTCCAACCTGAACTCAACTCT...AGCCGGCCTGGAACATGTAGCAAGCCTCCTGCACCAGCTTCCTGTGTGGGATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234334.2 |
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| CDS-3UTR CAA 90 bp | GGCACATGGGACAATTTCCCTATGGATCTTTGTGTTCCCTTTATATATGTGTGTTCACACATGAGCTTCTaGGTCACCCAGTCGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GTWDNFPMDLCVPFIYVCSHMSF*VTQSRA Trigger: TGCCCTCGACTGGGTGACCAAGAAGCTCATGTGTGA...ACACACATATATAAAGGGAACACAAAGATCCATAGGGAAATTGTCCCATGTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS TCA 72 bp | ACTGGAGCCCATGCACGTGGCCTGAGAGCCGGTGGGTaGGGTAGGGCTGCTCCAGGGAGGGTGGGCTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: TGAHARGLRAGG*GRAAPGRVGWP Trigger: AGGCCAGCCCACCCTCCCTGGAGCAGCCCTACCTCACCCACCGGCTCTCAGGCCACGTGCATGGGCTCCAGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS CAA 90 bp | TGCTCCAGGGAGGGTGGGCTGGCCTTGCCCTGCCCTGCCCATATGTaGACCACATCACCCATTCCCGCAACTAACAGTCCCCGCTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: CSREGGLALPCPAHM*TTSPIPATNSPRWE Trigger: TTCCCAGCGGGGACTGTTAGTTGCGGGAATGGGTGATGTGGTCAACATATGGGCAGGGCAGGGCAAGGCCAGCCCACCCTCCCTGGAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS TCA 72 bp | ATGAGCTTCTTGGTCACCCAGTCGAGGGCAGCCACGTaGCCCCGACGCCCTCCTAAAGCCAGGTGTCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: MSFLVTQSRAAT*PRRPPKARCLP Trigger: AGGGAGACACCTGGCTTTAGGAGGGCGTCGGGGTCACGTGGCTGCCCTCGACTGGGTGACCAAGAAGCTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
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| CDS CCA 72 bp | TCCAGTCTGGAGCGGTCTTTGAGATCGGGGGCTTCTTaGAGAACCGGGACTTCTGGGCGATGTGCGCGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSLERSLRSGAS*RTGTSGRCARS Trigger: AGAGCGCGCACATCGCCCAGAAGTCCCGGTTCTCCAAGAAGCCCCCGATCTCAAAGACCGCTCCAGACTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
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| CDS CCA 72 bp | CCTGCTCCCTGGGGCAAGGTCCGGGAACTCAGGGGCTaGAATGTCCCTCGCAAGTCAAAGATCTTCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PAPWGKVRELRG*NVPRKSKIFSW Trigger: CCAGCTGAAGATCTTTGACTTGCGAGGGACATTCCAGCCCCTGAGTTCCCGGACCTTGCCCCAGGGAGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS TCA 72 bp | GTCTCTCTATCCGCTCCTTCTTCTGCTGCTCCAGAGTaGCCACATCCACCTCTGCCAGGGCTCGGGGGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: VSLSAPSSAAPE*PHPPLPGLGGS Trigger: TGAACCCCCGAGCCCTGGCAGAGGTGGATGTGGTCACTCTGGAGCAGCAGAAGAAGGAGCGGATAGAGAGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS CAA 90 bp | CCGGGTCACTCGGTCACAGCGGCGGATGCAGTGAAGCTCGATGCCTaGGTTGTCGTAGATATAAAGCCAGCGGTTCTGAGCGACTGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: PGHSVTAADAVKLDA*VVVDIKPAVLSDCE Trigger: CTCGCAGTCGCTCAGAACCGCTGGCTTTATATCTACGACAACCAAGGCATCGAGCTTCACTGCATCCGCCGCTGTGACCGAGTGACCCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
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| CDS TCA 72 bp | CGTCCTCTGAGGCTTCTTCCAGTCTGGAGCGGTCTTTaGGATCGGGGGCTTCTTGGAGAACCGGGACTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RPLRLLPVWSGL*DRGLLGEPGLL Trigger: CAGAAGTCCCGGTTCTCCAAGAAGCCCCCGATCTCAAAGACCGCTCCAGACTGGAAGAAGCCTCAGAGGACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
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| CDS CAA 72 bp | GCGTCCTCTGAGGCTTCTTCCAGTCTGGAGCGGTCTTaGAGATCGGGGGCTTCTTGGAGAACCGGGACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ASSEASSSLERS*RSGASWRTGTS Trigger: AGAAGTCCCGGTTCTCCAAGAAGCCCCCGATCTCAAAGACCGCTCCAGACTGGAAGAAGCCTCAGAGGACGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
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| CDS CAA 90 bp | AAGCAGCAGCTCAGCGCGGGCGGCTCTGACGCTTGCCTCTTCCTCTaGCGCTTCAGCCTTCTCGAGTTTGCTTTGAGTTTTAGGCTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: KQQLSAGGSDACLFL*RFSLLEFALSFRLR Trigger: TCGAAGCCTAAAACTCAAAGCAAACTCGAGAAGGCTGAAGCGCAAGAGGAAGAGGCAAGCGTCAGAGCCGCCCGCGCTGAGCTGCTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
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| CDS GCA 72 bp | GGAACTCAAGCCGGGTCACTCGGTCACAGCGGCGGATaGAGTGAAGCTCGATGCCTTGGTTGTCGTAGATAT | + |
|
Preference number: 6 (lower is better) Translates to: GTQAGSLGHSGG*SEARCLGCRRY Trigger: ATATCTACGACAACCAAGGCATCGAGCTTCACTGCATCCGCCGCTGTGACCGAGTGACCCGGCTTGAGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
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| CDS GCA 72 bp | ACCAGAGGTGGCCATGTACGTGCCTGTAGAATCTACTaGCACAGCACGCACCCCACCACGGTGACACAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: TRGGHVRACRIY*HSTHPTTVTQN Trigger: ATTCTGTGTCACCGTGGTGGGGTGCGTGCTGTGGCAGTAGATTCTACAGGCACGTACATGGCCACCTCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS GCA 72 bp | TCCTGCTTTTTCTTCTGCTGCTGCTGCTCAAGGCTCTaGCGGACTTTGTCCCTGTGCTCCTGGTCCATGACC | + |
|
Preference number: 6 (lower is better) Translates to: SCFFFCCCCSRL*RTLSLCSWSMT Trigger: GGTCATGGACCAGGAGCACAGGGACAAAGTCCGGCAGAGCCTTGAGCAGCAGCAGCAGAAGAAAAAGCAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS CCA 72 bp | GGCTGGAATGTCCCTCGCAAGTCAAAGATCTTCAGCTaGTGGTCCAGACCAGAGGTGGCCATGTACGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GWNVPRKSKIFS*WSRPEVAMYVP Trigger: AGGCACGTACATGGCCACCTCTGGTCTGGACCACCAGCTGAAGATCTTTGACTTGCGAGGGACATTCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
||
| CDS CCA 72 bp | CACCTCCCATTCCTGGCGCTGCTTCCGGCTCCGGTATaGGTTATTCTCCAAACCATCAAAGTTAGGCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: HLPFLALLPAPV*VILQTIKVRLR Trigger: GCGGAGCCTAACTTTGATGGTTTGGAGAATAACCCATACCGGAGCCGGAAGCAGCGCCAGGAATGGGAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025170.11 |
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| CDS CAA 90 bp | GCCTCAGAATGGAGGAAGTGGATGTCCCGTACTGCTTCCATGACGTaGATCTCACACATGAGCTTCTTGGTCACCCAGTCGAGGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ASEWRKWMSRTASMT*ISHMSFLVTQSRAA Trigger: GGCTGCCCTCGACTGGGTGACCAAGAAGCTCATGTGTGAGATCAACGTCATGGAAGCAGTACGGGACATCCACTTCCTCCATTCTGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
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| CDS GCA 72 bp | GCACTGGCGATGTCCACAGCCTCCACGATGTCTGTCTaGAGGATTTTTGCCGTGTCTTCCCCATCTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ALAMSTASTMSV*RIFAVSSPSSP Trigger: AGGAGAAGATGGGGAAGACACGGCAAAAATCCTGCAGACAGACATCGTGGAGGCTGTGGACATCGCCAGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
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| CDS CAA 72 bp | TCGGTCACAGCGGCGGATGCAGTGAAGCTCGATGCCTaGGTTGTCGTAGATATAAAGCCAGCGGTTCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SVTAADAVKLDA*VVVDIKPAVLS Trigger: GCTCAGAACCGCTGGCTTTATATCTACGACAACCAAGGCATCGAGCTTCACTGCATCCGCCGCTGTGACCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
||
| CDS CAA 90 bp | CACTGGCGATGTCCACAGCCTCCACGATGTCTGTCTGCAGGATTTTaGCCGTGTCTTCCCCATCTTCTCCTACCAGAAACCCAGGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: HWRCPQPPRCLSAGF*PCLPHLLLPETQVP Trigger: AGGAACCTGGGTTTCTGGTAGGAGAAGATGGGGAAGACACGGCAAAAATCCTGCAGACAGACATCGTGGAGGCTGTGGACATCGCCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
||
| CDS GCA 72 bp | TCACTCGGTCACAGCGGCGGATGCAGTGAAGCTCGATaGCTTGGTTGTCGTAGATATAAAGCCAGCGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLGHSGGCSEAR*LGCRRYKASGS Trigger: AGAACCGCTGGCTTTATATCTACGACAACCAAGGCATCGAGCTTCACTGCATCCGCCGCTGTGACCGAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
||
| CDS CCA 72 bp | ACTGTCTTAGATTCAGGTCAAAGTGCTTGGCAGCACTaGCGATGTCCACAGCCTCCACGATGTCTGTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TVLDSGQSAWQH*RCPQPPRCLSA Trigger: TGCAGACAGACATCGTGGAGGCTGTGGACATCGCCAGTGCTGCCAAGCACTTTGACCTGAATCTAAGACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
||
| CDS CAA 72 bp | TGTCCACAGCCTCCACGATGTCTGTCTGCAGGATTTTaGCCGTGTCTTCCCCATCTTCTCCTACCAGAAACC | + |
|
Preference number: 6 (lower is better) Translates to: CPQPPRCLSAGF*PCLPHLLLPET Trigger: GGTTTCTGGTAGGAGAAGATGGGGAAGACACGGCAAAAATCCTGCAGACAGACATCGTGGAGGCTGTGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
||
| CDS CAA 72 bp | TGGAGGAAGTGGATGTCCCGTACTGCTTCCATGACGTaGATCTCACACATGAGCTTCTTGGTCACCCAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: WRKWMSRTASMT*ISHMSFLVTQS Trigger: CGACTGGGTGACCAAGAAGCTCATGTGTGAGATCAACGTCATGGAAGCAGTACGGGACATCCACTTCCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
||
| CDS CAA 72 bp | CTCTTCCTCTTGCGCTTCAGCCTTCTCGAGTTTGCTTaGAGTTTTAGGCTTCGAATGTGGGAGCGTTTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LFLLRFSLLEFA*SFRLRMWERFG Trigger: TCCAAAACGCTCCCACATTCGAAGCCTAAAACTCAAAGCAAACTCGAGAAGGCTGAAGCGCAAGAGGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025170.11 ENSMUST00000234334.2 |
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