Pregenerated sensors for WDR45B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025173Ensembl transcript IDs: ENSMUST00000026173.13
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGCCATCCCAATGTTAGTGTGTTCCTATGGATGCTGGGAGAGATaGGACAGGACAAACGCCACAGGCCAAGGCAGTACCCTCCACACC | + |
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Preference number: 1 (lower is better) Translates to: PAIPMLVCSYGCWER*DRTNATGQGSTLHT Trigger: GGTGTGGAGGGTACTGCCTTGGCCTGTGGCGTTTGTCCTGTCTCATCTCTCCCAGCATCCATAGGAACACACTAACATTGGGATGGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR TCA 90 bp | GGCATGAATATGGTGGTGCCATTAATGCTAGCATCACAGGTGAATTaGAGGGTAGTGGCTAGCAAGGGCACGAACCGCCCAGAGCCACGG | + |
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Preference number: 1 (lower is better) Translates to: GMNMVVPLMLASQVN*RVVASKGTNRPEPR Trigger: CCGTGGCTCTGGGCGGTTCGTGCCCTTGCTAGCCACTACCCTTCAATTCACCTGTGATGCTAGCATTAATGGCACCACCATATTCATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR TCA 90 bp | GTACCCTCCACACCAACGGGAGCTAGAGGCACATGGACACTGCACTaGGAAGGCCCCTCAGTAAAGCAATGCTCTCTTCTGGGACTGATT | + |
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Preference number: 1 (lower is better) Translates to: VPSTPTGARGTWTLH*EGPSVKQCSLLGLI Trigger: AATCAGTCCCAGAAGAGAGCATTGCTTTACTGAGGGGCCTTCTCAGTGCAGTGTCCATGTGCCTCTAGCTCCCGTTGGTGTGGAGGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR GCA 90 bp | ACAGAAACACAGACTCTTCAGTCTGTGCCAGTACCAGGATGTGCCTaGCATCCCAATGTTAGTGTGTTCCTATGGATGCTGGGAGAGATG | + |
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Preference number: 1 (lower is better) Translates to: TETQTLQSVPVPGCA*HPNVSVFLWMLGEM Trigger: CATCTCTCCCAGCATCCATAGGAACACACTAACATTGGGATGGCAGGCACATCCTGGTACTGGCACAGACTGAAGAGTCTGTGTTTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR CCA 90 bp | GAGGCAGGGGGTGCTCTACCAGACAAGCTGATAGTGTTATCTCATTaGAACTGTCTAGTATTTAAGCCCCGACACACTCATCCTACAAGC | + |
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Preference number: 1 (lower is better) Translates to: EAGGALPDKLIVLSH*NCLVFKPRHTHPTS Trigger: GCTTGTAGGATGAGTGTGTCGGGGCTTAAATACTAGACAGTTCCAATGAGATAACACTATCAGCTTGTCTGGTAGAGCACCCCCTGCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR-3UTR CCA 90 bp | ACGCCACAGGCCAAGGCAGTACCCTCCACACCAACGGGAGCTAGAGGCACATGGAGTCCACAGGGCGGCTaGGTGGTGGCATCACCTGCG | + |
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Preference number: 2 (lower is better) Translates to: TPQAKAVPSTPTGARGTWSPQGG*VVASPA Trigger: CGCAGGTGATGCCACCACCCAGCCGCCCTGTGGACT...CCATGTGCCTCTAGCTCCCGTTGGTGTGGAGGGTACTGCCTTGGCCTGTGGCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR-3UTR CCA 90 bp | TGCTCCCCATGTGAGGCAGGGGGTGCTCTACCAGACAAGCTGATAGTGTTATCTCCTCACCCACAGGCCTaGGGCACTGGCACCAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: CSPCEAGGALPDKLIVLSPHPQA*GTGTSP Trigger: GGGGCTGGTGCCAGTGCCCCAGGCCTGTGGGTGAGG...AGATAACACTATCAGCTTGTCTGGTAGAGCACCCCCTGCCTCACATGGGGAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR-3UTR CCA 90 bp | CCATGTGAGGCAGGGGGTGCTCTACCAGACAAGCTGATAGTGTTATCTCATTGGACAGGCCTGGGGCACTaGCACCAGCCCCAGGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: PCEAGGALPDKLIVLSHWTGLGH*HQPQES Trigger: GGACTCCTGGGGCTGGTGCCAGTGCCCCAGGCCTGT...CCAATGAGATAACACTATCAGCTTGTCTGGTAGAGCACCCCCTGCCTCACATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR-3UTR GCA 90 bp | GAGATGAGACAGGACAAACGCCACAGGCCAAGGCAGTACCCTCCACACCAACGGTGGGATGAGAAGCCTTaGTCAGGAAGGCAGACAACC | + |
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Preference number: 2 (lower is better) Translates to: EMRQDKRHRPRQYPPHQRWDEKP*SGRQTT Trigger: GGTTGTCTGCCTTCCTGAGCAAGGCTTCTCATCCCA...CCGTTGGTGTGGAGGGTACTGCCTTGGCCTGTGGCGTTTGTCCTGTCTCATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR-3UTR TCA 90 bp | ACGCCACAGGCCAAGGCAGTACCCTCCACACCAACGGGAGCTAGAGGCACATGGTCCTTTAATATGGGATaGGAAGCCTTGCTCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: TPQAKAVPSTPTGARGTWSFNMG*EALLRK Trigger: CTTCCTGAGCAAGGCTTCTCATCCCATATTAAAGGA...CCATGTGCCTCTAGCTCCCGTTGGTGTGGAGGGTACTGCCTTGGCCTGTGGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR-3UTR GCA 90 bp | GATGCTGGGAGAGATGAGACAGGACAAACGCCACAGGCCAAGGCAGTACCCTCCGAGCCACGGAGTGTCTaGAGAACCATGATGATGATC | + |
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Preference number: 2 (lower is better) Translates to: DAGRDETGQTPQAKAVPSEPRSV*RTMMMI Trigger: GATCATCATCATGGTTCTGCAGACACTCCGTGGCTC...GGAGGGTACTGCCTTGGCCTGTGGCGTTTGTCCTGTCTCATCTCTCCCAGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR-3UTR TCA 90 bp | TCCACAGTTAGCCGATTACAGGAGCATAAAGGAACTGGCAGAACTGAGAACCTGACAGTGCTCCCCATGTaGGGCAGGGGGTGCTCTACC | + |
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Preference number: 2 (lower is better) Translates to: STVSRLQEHKGTGRTENLTVLPM*GRGCST Trigger: GGTAGAGCACCCCCTGCCTCACATGGGGAGCACTGT...CAGGTTCTCAGTTCTGCCAGTTCCTTTATGCTCCTGTAATCGGCTAACTGTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR-3UTR GCA 90 bp | TGCTCCCCATGTGAGGCAGGGGGTGCTCTACCAGACAAGCTGATAGTGTTATCTATAGTTCCCAAGGACTaGAGGGAGCCTACTGGCATG | + |
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Preference number: 2 (lower is better) Translates to: CSPCEAGGALPDKLIVLSIVPKD*REPTGM Trigger: CATGCCAGTAGGCTCCCTGCAGTCCTTGGGAACTAT...AGATAACACTATCAGCTTGTCTGGTAGAGCACCCCCTGCCTCACATGGGGAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR-3UTR CCA 90 bp | TCCACAGTTAGCCGATTACAGGAGCATAAAGGAACTGGCAGAACTGAGAACCTGGGGCTGTGCCTCAAATaGGTGCCACAAGCATTCTGC | + |
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Preference number: 2 (lower is better) Translates to: STVSRLQEHKGTGRTENLGLCLK*VPQAFC Trigger: GCAGAATGCTTGTGGCACCCATTTGAGGCACAGCCC...CAGGTTCTCAGTTCTGCCAGTTCCTTTATGCTCCTGTAATCGGCTAACTGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR-3UTR GCA 90 bp | CTGATTTTTAAAGACTATGCGTTACTCTGTTCCCTACAGATAATGGGAAAGTTCGAACTCCCCAGTGTGTaGTCTGAACAGTGCTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: LIFKDYALLCSLQIMGKFELPSV*SEQCSP Trigger: TGGGGAGCACTGTTCAGAGCACACACTGGGGAGTTC...GAACTTTCCCATTATCTGTAGGGAACAGAGTAACGCATAGTCTTTAAAAATCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR TCA 72 bp | ACACCAACGGGAGCTAGAGGCACATGGACACTGCACTaGGAAGGCCCCTCAGTAAAGCAATGCTCTCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: TPTGARGTWTLH*EGPSVKQCSLL Trigger: CAGAAGAGAGCATTGCTTTACTGAGGGGCCTTCTCAGTGCAGTGTCCATGTGCCTCTAGCTCCCGTTGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR GCA 72 bp | CCCGACACACTCATCCTACAAGCTTCTGCTGATTCGTaGTTGGATAGTTCCCAAGGACTGCAGGGAGCCTAC | + |
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Preference number: 3 (lower is better) Translates to: PDTLILQASADS*LDSSQGLQGAY Trigger: GTAGGCTCCCTGCAGTCCTTGGGAACTATCCAAGCACGAATCAGCAGAAGCTTGTAGGATGAGTGTGTCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR TCA 72 bp | ATGGTGGTGCCATTAATGCTAGCATCACAGGTGAATTaGAGGGTAGTGGCTAGCAAGGGCACGAACCGCCCA | + |
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Preference number: 3 (lower is better) Translates to: MVVPLMLASQVN*RVVASKGTNRP Trigger: TGGGCGGTTCGTGCCCTTGCTAGCCACTACCCTTCAATTCACCTGTGATGCTAGCATTAATGGCACCACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR TCA 72 bp | GCCACAAGCATTCTGCTCTCTGGTAGGTCTGGGATGTaGCTCACTCTAATGGCCAAAGTCAGAACTCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: ATSILLSGRSGM*LTLMAKVRTPQ Trigger: CTGGGGAGTTCTGACTTTGGCCATTAGAGTGAGTCACATCCCAGACCTACCAGAGAGCAGAATGCTTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR TCA 72 bp | CCAATGTTAGTGTGTTCCTATGGATGCTGGGAGAGATaGGACAGGACAAACGCCACAGGCCAAGGCAGTACC | + |
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Preference number: 3 (lower is better) Translates to: PMLVCSYGCWER*DRTNATGQGST Trigger: GGTACTGCCTTGGCCTGTGGCGTTTGTCCTGTCTCATCTCTCCCAGCATCCATAGGAACACACTAACATTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR CCA 72 bp | GGATGTGCCTGCCATCCCAATGTTAGTGTGTTCCTATaGATGCTGGGAGAGATGAGACAGGACAAACGCCAC | + |
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Preference number: 3 (lower is better) Translates to: GCACHPNVSVFL*MLGEMRQDKRH Trigger: GTGGCGTTTGTCCTGTCTCATCTCTCCCAGCATCCATAGGAACACACTAACATTGGGATGGCAGGCACATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR GCA 72 bp | CAGACTCTTCAGTCTGTGCCAGTACCAGGATGTGCCTaGCATCCCAATGTTAGTGTGTTCCTATGGATGCTG | + |
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Preference number: 3 (lower is better) Translates to: QTLQSVPVPGCA*HPNVSVFLWML Trigger: CAGCATCCATAGGAACACACTAACATTGGGATGGCAGGCACATCCTGGTACTGGCACAGACTGAAGAGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR GCA 72 bp | CCTCAAGTGGTACAGAAACACAGACTCTTCAGTCTGTaGCAGTACCAGGATGTGCCTGCCATCCCAATGTTA | + |
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Preference number: 3 (lower is better) Translates to: PQVVQKHRLFSL*QYQDVPAIPML Trigger: TAACATTGGGATGGCAGGCACATCCTGGTACTGGCACAGACTGAAGAGTCTGTGTTTCTGTACCACTTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR CCA 72 bp | TGCTTGGATAGTTCCCAAGGACTGCAGGGAGCCTACTaGCATGAATATGGTGGTGCCATTAATGCTAGCATC | + |
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Preference number: 3 (lower is better) Translates to: CLDSSQGLQGAY*HEYGGAINASI Trigger: GATGCTAGCATTAATGGCACCACCATATTCATGCCAGTAGGCTCCCTGCAGTCCTTGGGAACTATCCAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| 3UTR CCA 72 bp | GGTGCTCTACCAGACAAGCTGATAGTGTTATCTCATTaGAACTGTCTAGTATTTAAGCCCCGACACACTCAT | + |
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Preference number: 3 (lower is better) Translates to: GALPDKLIVLSH*NCLVFKPRHTH Trigger: ATGAGTGTGTCGGGGCTTAAATACTAGACAGTTCCAATGAGATAACACTATCAGCTTGTCTGGTAGAGCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| CDS-3UTR TCA 90 bp | CCACAGGCCAAGGCAGTACCCTCCACACCAACGGGAGCTAGAGGCACATGGACAGAGCCTGAAGGAACCTaGAACTTGGAAAAACTCCAC | + |
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Preference number: 4 (lower is better) Translates to: PQAKAVPSTPTGARGTWTEPEGT*NLEKLH Trigger: GTGGAGTTTTTCCAAGTTTCAGGTTCCTTCAGGCTC...TGTCCATGTGCCTCTAGCTCCCGTTGGTGTGGAGGGTACTGCCTTGGCCTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| CDS-3UTR TCA 90 bp | CCATGTGAGGCAGGGGGTGCTCTACCAGACAAGCTGATAGTGTTATCTCATTGGTGTACGTGGCCAGTGTaGGTGCCAGGGAAGGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: PCEAGGALPDKLIVLSHWCTWPV*VPGKAR Trigger: TCTTGCCTTCCCTGGCACTCACACTGGCCACGTACA...CCAATGAGATAACACTATCAGCTTGTCTGGTAGAGCACCCCCTGCCTCACATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| CDS-3UTR GCA 90 bp | GAGGCAGGGGGTGCTCTACCAGACAAGCTGATAGTGTTATCTCATTGGAACTGTCGTGGCCAGTGTGAGTaGCAGGGAAGGCAAGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: EAGGALPDKLIVLSHWNCRGQCE*QGRQEG Trigger: CCCTTCTTGCCTTCCCTGGCACTCACACTGGCCACG...ACAGTTCCAATGAGATAACACTATCAGCTTGTCTGGTAGAGCACCCCCTGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| CDS-3UTR CCA 90 bp | CCATGTGAGGCAGGGGGTGCTCTACCAGACAAGCTGATAGTGTTATCTCATTGGAAACACCCGTGGTCCTaGTTGAAGCCGGCGTACAGC | + |
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Preference number: 4 (lower is better) Translates to: PCEAGGALPDKLIVLSHWKHPWS*LKPAYS Trigger: GCTGTACGCCGGCTTCAACCAGGACCACGGGTGTTT...CCAATGAGATAACACTATCAGCTTGTCTGGTAGAGCACCCCCTGCCTCACATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| CDS-3UTR GCA 90 bp | CAGTACCCTCCACACCAACGGGAGCTAGAGGCACATGGACACTGCACTGAGAAGATTTTCCATTCCACATaGAAAACACCCGTGGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QYPPHQRELEAHGHCTEKIFHST*KTPVVL Trigger: CAGGACCACGGGTGTTTTGCATGTGGAATGGAAAAT...CTTCTCAGTGCAGTGTCCATGTGCCTCTAGCTCCCGTTGGTGTGGAGGGTACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| CDS-3UTR CCA 90 bp | ACCTCAAGTGGTACAGAAACACAGACTCTTCAGTCTGTGCCAGTACCAGGATGTCATGCAAAACACCCGTaGTCCTGGTTGAAGCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: TSSGTETQTLQSVPVPGCHAKHP*SWLKPA Trigger: CGCCGGCTTCAACCAGGACCACGGGTGTTTTGCATG...ACATCCTGGTACTGGCACAGACTGAAGAGTCTGTGTTTCTGTACCACTTGAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| CDS-3UTR GCA 90 bp | ACCTCAAGTGGTACAGAAACACAGACTCTTCAGTCTGTGCCAGTACCAGGATGTACAGATAGCAATGACTaGATTGGGCTCTGTTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: TSSGTETQTLQSVPVPGCTDSND*IGLCSK Trigger: TTTGGAACAGAGCCCAATGCAGTCATTGCTATCTGT...ACATCCTGGTACTGGCACAGACTGAAGAGTCTGTGTTTCTGTACCACTTGAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| CDS-3UTR TCA 90 bp | CTGATTTTTAAAGACTATGCGTTACTCTGTTCCCTACAGATAATGGGAAAGTTCTGGAAGGAAACTGGCTaGTGCCAAACTAGACTGTTT | + |
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Preference number: 4 (lower is better) Translates to: LIFKDYALLCSLQIMGKFWKETG*CQTRLF Trigger: AAACAGTCTAGTTTGGCATCAGCCAGTTTCCTTCCA...GAACTTTCCCATTATCTGTAGGGAACAGAGTAACGCATAGTCTTTAAAAATCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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| CDS-3UTR CAA 90 bp | TGCTCCCCATGTGAGGCAGGGGGTGCTCTACCAGACAAGCTGATAGTGTTATCTAAGGCAAGAAGGGAGTaGTTACTGTTGGGACACAGG | + |
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Preference number: 5 (lower is better) Translates to: CSPCEAGGALPDKLIVLSKARRE*LLLGHR Trigger: CCTGTGTCCCAACAGTAACAACTCCCTTCTTGCCTT...AGATAACACTATCAGCTTGTCTGGTAGAGCACCCCCTGCCTCACATGGGGAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026173.13 |
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