Pregenerated sensors for WDR44 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036769Ensembl transcript IDs: ENSMUST00000035766.13, ENSMUST00000101670.3, ENSMUST00000149483.2
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCAGGTCGAGATGGAGGTGGGGGTCTAGGAGGCGGGAAATTAGTTaGTGGGGGTGGGCGCGCAGGAACAGGCTTCTTTGTACTGGCTAC | + |
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Preference number: 1 (lower is better) Translates to: CRSRWRWGSRRREIS*WGWARRNRLLCTGY Trigger: GTAGCCAGTACAAAGAAGCCTGTTCCTGCGCGCCCACCCCCACCAACTAATTTCCCGCCTCCTAGACCCCCACCTCCATCTCGACCTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149483.2 |
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| 3UTR CCA 90 bp | AGGTCGAGATGGAGGTGGGGGTCTAGGAGGCGGGAAATTAGTTGGTaGGGGTGGGCGCGCAGGAACAGGCTTCTTTGTACTGGCTACTAT | + |
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Preference number: 1 (lower is better) Translates to: RSRWRWGSRRREISW*GWARRNRLLCTGYY Trigger: ATAGTAGCCAGTACAAAGAAGCCTGTTCCTGCGCGCCCACCCCCACCAACTAATTTCCCGCCTCCTAGACCCCCACCTCCATCTCGACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149483.2 |
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| 3UTR CCA 90 bp | AGATGGAGGTGGGGGTCTAGGAGGCGGGAAATTAGTTGGTGGGGGTaGGCGCGCAGGAACAGGCTTCTTTGTACTGGCTACTATATCAGG | + |
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Preference number: 1 (lower is better) Translates to: RWRWGSRRREISWWG*ARRNRLLCTGYYIR Trigger: CCTGATATAGTAGCCAGTACAAAGAAGCCTGTTCCTGCGCGCCCACCCCCACCAACTAATTTCCCGCCTCCTAGACCCCCACCTCCATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149483.2 |
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| 3UTR GCA 90 bp | ACAGGCTTCTTTGTACTGGCTACTATATCAGGTTCTGGAGTAAGGTaGCTTGGGGGTTTGGCAGGAGCCACTTCTTCCACAGCAGCAAAA | + |
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Preference number: 1 (lower is better) Translates to: TGFFVLATISGSGVR*LGGLAGATSSTAAK Trigger: TTTTGCTGCTGTGGAAGAAGTGGCTCCTGCCAAACCCCCAAGGCACCTTACTCCAGAACCTGATATAGTAGCCAGTACAAAGAAGCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149483.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCTGGCTTATTTTTAAGTaGGCAAAGCCTGGTGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: SFRNICKPSTTLPGFYCPWLIFK*AKPGAH Trigger: ATGAGCACCAGGCTTTGCTCACTTAAAAATAAGCCA...GGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| 3UTR-3UTR GCA 90 bp | AGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCGTGAGCAAAGCCTGGTaGTCATGGATAAAGAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: SFRNICKPSTTLPGFYCPVSKAW*SWIKKR Trigger: TCTTTTCTTTATCCATGAGCACCAGGCTTTGCTCAC...GGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| 3UTR-3UTR GCA 90 bp | GTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGTGAGCAAAGCCTGGTaGTCATGGATAAAGAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: VSETYANHQQHYQGSIVPVSKAW*SWIKKR Trigger: TCTTTTCTTTATCCATGAGCACCAGGCTTTGCTCAC...TGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| 3UTR-3UTR TCA 90 bp | ATACTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATGGCTTATTTTTAAGTaGGCAAAGCCTGGTGCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: ILQFQKHMQTINNITRVLWLIFK*AKPGAH Trigger: ATGAGCACCAGGCTTTGCTCACTTAAAAATAAGCCA...TAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| 3UTR-3UTR GCA 90 bp | GTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCATACATAGAAACATTGTaGTCCAGTGTGGCAAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: VSETYANHQQHYQGSIVPYIETL*SSVAKK Trigger: TTTCTTTGCCACACTGGAGCACAATGTTTCTATGTA...TGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| 3UTR-3UTR GCA 90 bp | CATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTGGTACATTATATTGGTTACATAGAAACATTGTaGTCCAGTGTGGCAAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: HYQGSIVPDVISLVHYIGYIETL*SSVAKK Trigger: TTTCTTTGCCACACTGGAGCACAATGTTTCTATGTA...ACCAATATAATGTACCAATGAAATAACATCTGGGACAATAGAACCCTGGTAATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| 3UTR-3UTR GCA 90 bp | AACATTTTTGTGTTTCTAGTTCACTTTCTTCAGCTACATTCTGACTTTCTGCCTTCTTGTTGTAGTTCATaGTCTATGGCTAATAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: NIFVFLVHFLQLHSDFLPSCCSS*SMANSP Trigger: TGGACTATTAGCCATAGAGCATGAACTACAACAAGA...AGGCAGAAAGTCAGAATGTAGCTGAAGAAAGTGAACTAGAAACACAAAAATGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149483.2 |
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| 3UTR-3UTR CCA 90 bp | TGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTAAAGCCTGGTGCTCATaGATAAAGAAAAGAATTCTT | + |
|
Preference number: 2 (lower is better) Translates to: CKPSTTLPGFYCPRCYFIKAWCS*IKKRIL Trigger: AAGAATTCTTTTCTTTATCCATGAGCACCAGGCTTT...AATGAAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| 3UTR-3UTR CCA 90 bp | CATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTGGTACATTATATTGGTAAAGCCTGGTGCTCATaGATAAAGAAAAGAATTCTT | + |
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Preference number: 2 (lower is better) Translates to: HYQGSIVPDVISLVHYIGKAWCS*IKKRIL Trigger: AAGAATTCTTTTCTTTATCCATGAGCACCAGGCTTT...ACCAATATAATGTACCAATGAAATAACATCTGGGACAATAGAACCCTGGTAATG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| 3UTR CCA 72 bp | TGGGGGTCTAGGAGGCGGGAAATTAGTTGGTGGGGGTaGGCGCGCAGGAACAGGCTTCTTTGTACTGGCTAC | + |
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Preference number: 3 (lower is better) Translates to: WGSRRREISWWG*ARRNRLLCTGY Trigger: GTAGCCAGTACAAAGAAGCCTGTTCCTGCGCGCCCACCCCCACCAACTAATTTCCCGCCTCCTAGACCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149483.2 |
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| 3UTR CCA 72 bp | TGGAGGTGGGGGTCTAGGAGGCGGGAAATTAGTTGGTaGGGGTGGGCGCGCAGGAACAGGCTTCTTTGTACT | + |
|
Preference number: 3 (lower is better) Translates to: WRWGSRRREISW*GWARRNRLLCT Trigger: AGTACAAAGAAGCCTGTTCCTGCGCGCCCACCCCCACCAACTAATTTCCCGCCTCCTAGACCCCCACCTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149483.2 |
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| 3UTR CCA 72 bp | AGATGGAGGTGGGGGTCTAGGAGGCGGGAAATTAGTTaGTGGGGGTGGGCGCGCAGGAACAGGCTTCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: RWRWGSRRREIS*WGWARRNRLLC Trigger: ACAAAGAAGCCTGTTCCTGCGCGCCCACCCCCACCAACTAATTTCCCGCCTCCTAGACCCCCACCTCCATCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149483.2 |
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| 3UTR CCA 72 bp | AACAGGCTTCTTTGTACTGGCTACTATATCAGGTTCTaGAGTAAGGTGCCTTGGGGGTTTGGCAGGAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: NRLLCTGYYIRF*SKVPWGFGRSH Trigger: GTGGCTCCTGCCAAACCCCCAAGGCACCTTACTCCAGAACCTGATATAGTAGCCAGTACAAAGAAGCCTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149483.2 |
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| 3UTR GCA 72 bp | TTTGTACTGGCTACTATATCAGGTTCTGGAGTAAGGTaGCTTGGGGGTTTGGCAGGAGCCACTTCTTCCACA | + |
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Preference number: 3 (lower is better) Translates to: FVLATISGSGVR*LGGLAGATSST Trigger: TGTGGAAGAAGTGGCTCCTGCCAAACCCCCAAGGCACCTTACTCCAGAACCTGATATAGTAGCCAGTACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149483.2 |
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| 3UTR GCA 72 bp | TATGTTACTAAACTCTGTCCCAGCCACAGAAGGACCTaGAGTAGCCTCATCAGAAAGTCCTTTTCCTTTGGA | + |
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Preference number: 3 (lower is better) Translates to: YVTKLCPSHRRT*SSLIRKSFSFG Trigger: TCCAAAGGAAAAGGACTTTCTGATGAGGCTACTGCAGGTCCTTCTGTGGCTGGGACAGAGTTTAGTAACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149483.2 |
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| 3UTR-3UTR CAA 90 bp | TTCTTTGTACTGGCTACTATATCAGGTTCTGGAGTAAGGTGCCTTGGGGGTTTGAGAACATCACCTTCTTaGACTTCCAATGCTTCCTTG | + |
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Preference number: 3 (lower is better) Translates to: FFVLATISGSGVRCLGGLRTSPS*TSNASL Trigger: CAAGGAAGCATTGGAAGTCAAAGAAGGTGATGTTCT...CAAACCCCCAAGGCACCTTACTCCAGAACCTGATATAGTAGCCAGTACAAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149483.2 |
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| 3UTR GCA 72 bp | TTCAGTGTTTCAGCTTCTAGTCCAGAAGCATCAAGCTaGTCACCTGAACTTACTTCAGTTAAATTATCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: FSVSASSPEASS*SPELTSVKLSV Trigger: GACTGATAATTTAACTGAAGTAAGTTCAGGTGAGCAGCTTGATGCTTCTGGACTAGAAGCTGAAACACTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149483.2 |
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| 3UTR-3UTR CAA 90 bp | ATACTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTACTTTACATAGAAACATaGTGCTCCAGTGTGGCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: ILQFQKHMQTINNITRVLLYIET*CSSVAK Trigger: CTTTGCCACACTGGAGCACAATGTTTCTATGTAAAG...TAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR GCA 90 bp | CTGGCTACTATATCAGGTTCTGGAGTAAGGTGCCTTGGGGGTTTGGCAGGAGCCATTTCCAGCTTGGTTTaGTGTATTCTCGGCTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LATISGSGVRCLGGLAGAISSLV*CILGFP Trigger: AGGGAAGCCGAGAATACAGCAAACCAAGCTGGAAAT...GGCTCCTGCCAAACCCCCAAGGCACCTTACTCCAGAACCTGATATAGTAGCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149483.2 |
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| CDS-3UTR CCA 90 bp | AGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCCGGGAAATTAGTTGGTaGGGGTGGGCGCGCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: SFRNICKPSTTLPGFYCPREISW*GWARRN Trigger: GTTCCTGCGCGCCCACCCCCACCAACTAATTTCCCG...GGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR CCA 90 bp | AGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCATTAGTTGGTGGGGGTaGGCGCGCAGGAACAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SFRNICKPSTTLPGFYCPISWWG*ARRNRL Trigger: AAGCCTGTTCCTGCGCGCCCACCCCCACCAACTAAT...GGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR CCA 90 bp | CTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGCGGGAAATTAGTTGGTaGGGGTGGGCGCGCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LQFQKHMQTINNITRVLLREISW*GWARRN Trigger: GTTCCTGCGCGCCCACCCCCACCAACTAATTTCCCG...CAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR CCA 90 bp | CTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGAGGTCGAGATGGAGGTaGGGGTCTAGGAGGCGGGAA | + |
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Preference number: 4 (lower is better) Translates to: LQFQKHMQTINNITRVLLRSRWR*GSRRRE Trigger: TTCCCGCCTCCTAGACCCCCACCTCCATCTCGACCT...CAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR GCA 90 bp | GTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGGTTCTGGAGTAAGGTaGCTTGGGGGTTTGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: VSETYANHQQHYQGSIVPGSGVR*LGGLAG Trigger: TCCTGCCAAACCCCCAAGGCACCTTACTCCAGAACC...TGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR CCA 90 bp | TTCTTTGTACTGGCTACTATATCAGGTTCTGGAGTAAGGTGCCTTGGGGGTTTGGACTCATTTCCAGCTTaGTTTGCTGTATTCTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: FFVLATISGSGVRCLGGLDSFPA*FAVFSA Trigger: AGCCGAGAATACAGCAAACCAAGCTGGAAATGAGTC...CAAACCCCCAAGGCACCTTACTCCAGAACCTGATATAGTAGCCAGTACAAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149483.2 |
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| CDS-3UTR CCA 90 bp | CATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTATTAGTTGGTGGGGGTaGGCGCGCAGGAACAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: HMQTINNITRVLLSQMLFISWWG*ARRNRL Trigger: AAGCCTGTTCCTGCGCGCCCACCCCCACCAACTAAT...AAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR CCA 90 bp | CATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTGGTACATTATATTGGTAGGTCGAGATGGAGGTaGGGGTCTAGGAGGCGGGAA | + |
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Preference number: 4 (lower is better) Translates to: HYQGSIVPDVISLVHYIGRSRWR*GSRRRE Trigger: TTCCCGCCTCCTAGACCCCCACCTCCATCTCGACCT...ACCAATATAATGTACCAATGAAATAACATCTGGGACAATAGAACCCTGGTAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR TCA 90 bp | GTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCATTGGATCTAGGTCTCTaGGGGCCCATCACTTCACCT | + |
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Preference number: 4 (lower is better) Translates to: VSETYANHQQHYQGSIVPLDLGL*GPITSP Trigger: AGGTGAAGTGATGGGCCCTCAGAGACCTAGATCCAA...TGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR TCA 90 bp | CATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTGTTGTCTTGTCCAGCTaGAGCAAGCAGTCGGCCACA | + |
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Preference number: 4 (lower is better) Translates to: HMQTINNITRVLLSQMLFVVLSS*SKQSAT Trigger: TGTGGCCGACTGCTTGCTTCAGCTGGACAAGACAAC...AAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR GCA 90 bp | CATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTGGTTCTGGAGTAAGGTaGCTTGGGGGTTTGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: HMQTINNITRVLLSQMLFGSGVR*LGGLAG Trigger: TCCTGCCAAACCCCCAAGGCACCTTACTCCAGAACC...AAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| 3UTR CAA 72 bp | GGACCTGCAGTAGCCTCATCAGAAAGTCCTTTTCCTTaGGAGTCCAAAGAGTCATCTTCCAATTGTAGTACT | + |
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Preference number: 4 (lower is better) Translates to: GPAVASSESPFP*ESKESSSNCST Trigger: AGTACTACAATTGGAAGATGACTCTTTGGACTCCAAAGGAAAAGGACTTTCTGATGAGGCTACTGCAGGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149483.2 |
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| CDS-3UTR TCA 90 bp | ATACTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGGATCTAGGTCTCTaGGGGCCCATCACTTCACCT | + |
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Preference number: 4 (lower is better) Translates to: ILQFQKHMQTINNITRVLLDLGL*GPITSP Trigger: AGGTGAAGTGATGGGCCCTCAGAGACCTAGATCCAA...TAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR TCA 90 bp | TGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTAGCAGTCGGCCACAGTaGGAAAACTTCATGGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: CKPSTTLPGFYCPRCYFISSRPQ*ENFMVQ Trigger: TTGGACCATGAAGTTTTCTCACTGTGGCCGACTGCT...AATGAAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR TCA 90 bp | GTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGAACTTAGACTTTCCTaGGATGGTGAAGGTGACACG | + |
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Preference number: 4 (lower is better) Translates to: VSETYANHQQHYQGSIVPELRLS*DGEGDT Trigger: CGTGTCACCTTCACCATCTCAGGAAAGTCTAAGTTC...TGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR TCA 90 bp | ATACTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTAAGCAGTCGGCCACAGTaGGAAAACTTCATGGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: ILQFQKHMQTINNITRVLSSRPQ*ENFMVQ Trigger: TTGGACCATGAAGTTTTCTCACTGTGGCCGACTGCT...TAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR TCA 90 bp | CTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGGAACTTAGACTTTCCTaGGATGGTGAAGGTGACACG | + |
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Preference number: 4 (lower is better) Translates to: LQFQKHMQTINNITRVLLELRLS*DGEGDT Trigger: CGTGTCACCTTCACCATCTCAGGAAAGTCTAAGTTC...CAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR GCA 90 bp | CATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTTCACCTGCTACTGTCTaGACATCAGGTGCTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: HMQTINNITRVLLSQMLFSPATV*TSGAFP Trigger: TGGAAAAGCACCTGATGTGCAGACAGTAGCAGGTGA...AAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR GCA 90 bp | CTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCACCTGCTACTGTCTaGACATCAGGTGCTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: LQFQKHMQTINNITRVLLSPATV*TSGAFP Trigger: TGGAAAAGCACCTGATGTGCAGACAGTAGCAGGTGA...CAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR CCA 90 bp | AGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCGACTCATTTCCAGCTTaGTTTGCTGTATTCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFRNICKPSTTLPGFYCPDSFPA*FAVFSA Trigger: AGCCGAGAATACAGCAAACCAAGCTGGAAATGAGTC...GGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR CCA 90 bp | TGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTTACTATATCAGGTTCTaGAGTAAGGTGCCTTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: CKPSTTLPGFYCPRCYFIYYIRF*SKVPWG Trigger: CCCCCAAGGCACCTTACTCCAGAACCTGATATAGTA...AATGAAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR TCA 90 bp | GTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCACTTTTCTTCATCATCTaGCTGTGTGGCATCATTGCT | + |
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Preference number: 4 (lower is better) Translates to: VSETYANHQQHYQGSIVPLFFII*LCGIIA Trigger: AGCAATGATGCCACACAGTCAGATGATGAAGAAAAG...TGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR TCA 90 bp | AGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCTCAGATCATACAGTCTaGTTCTGGAGTCATTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFRNICKPSTTLPGFYCPSDHTV*FWSHLR Trigger: CCTCAAATGACTCCAGAATCAGACTGTATGATCTGA...GGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR TCA 90 bp | GTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCATCAGATCATACAGTCTaGTTCTGGAGTCATTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSETYANHQQHYQGSIVPSDHTV*FWSHLR Trigger: CCTCAAATGACTCCAGAATCAGACTGTATGATCTGA...TGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR TCA 90 bp | CTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTGGAGCAAAGATGGCTaGCGTAACAACTGCATTATG | + |
|
Preference number: 4 (lower is better) Translates to: LQFQKHMQTINNITRVLLWSKDG*RNNCIM Trigger: CATAATGCAGTTGTTACGTCAGCCATCTTTGCTCCA...CAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | GTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAATTTCCAGCTTGGTTTaGTGTATTCTCGGCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSETYANHQQHYQGSIVPISSLV*CILGFL Trigger: AAGGAAGCCGAGAATACAGCAAACCAAGCTGGAAAT...TGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | CTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGGTCATGACTGAAACTTaGTTTGATCTGGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQFQKHMQTINNITRVLLVMTET*FDLAAA Trigger: AGCAGCAGCCAGATCAAAGCAAGTTTCAGTCATGAC...CAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CCA 90 bp | TGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTGACTCATTTCCAGCTTaGTTTGCTGTATTCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CKPSTTLPGFYCPRCYFIDSFPA*FAVFSA Trigger: AGCCGAGAATACAGCAAACCAAGCTGGAAATGAGTC...AATGAAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CCA 90 bp | CATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTGGTACATTATATTGGTTACTATATCAGGTTCTaGAGTAAGGTGCCTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HYQGSIVPDVISLVHYIGYYIRF*SKVPWG Trigger: CCCCCAAGGCACCTTACTCCAGAACCTGATATAGTA...ACCAATATAATGTACCAATGAAATAACATCTGGGACAATAGAACCCTGGTAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CCA 90 bp | GTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCACAGGCTTCTTTGTACTaGCTACTATATCAGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSETYANHQQHYQGSIVPQASLY*LLYQVL Trigger: CAGAACCTGATATAGTAGCCAGTACAAAGAAGCCTG...TGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CCA 90 bp | GTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAAGTGAGAAAACTTCATaGTCCAAACAGCTCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: VSETYANHQQHYQGSIVPSEKTS*SKQLPC Trigger: ACATGGGAGCTGTTTGGACCATGAAGTTTTCTCACT...TGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CCA 90 bp | TGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTTGCATTTTTGTCATCTaGGTCTTCGTCAGTTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: CKPSTTLPGFYCPRCYFICIFVI*VFVSSA Trigger: AGCGGAACTGACGAAGACCCAGATGACAAAAATGCA...AATGAAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CCA 90 bp | CTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTGCATTTTTGTCATCTaGGTCTTCGTCAGTTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQFQKHMQTINNITRVLLCIFVI*VFVSSA Trigger: AGCGGAACTGACGAAGACCCAGATGACAAAAATGCA...CAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR TCA 90 bp | CTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGCTTTTCTTCATCATCTaGCTGTGTGGCATCATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQFQKHMQTINNITRVLLLFFII*LCGIIA Trigger: AGCAATGATGCCACACAGTCAGATGATGAAGAAAAG...CAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR TCA 90 bp | CTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGGCATATTTGCCATTCTaGCAAAAATTGGCAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LQFQKHMQTINNITRVLLAYLPF*QKLAAV Trigger: CACAGCTGCCAATTTTTGTCAGAATGGCAAATATGC...CAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR TCA 90 bp | CATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTGGTACATTATATTGGTTGGAGCAAAGATGGCTaGCGTAACAACTGCATTATG | + |
|
Preference number: 4 (lower is better) Translates to: HYQGSIVPDVISLVHYIGWSKDG*RNNCIM Trigger: CATAATGCAGTTGTTACGTCAGCCATCTTTGCTCCA...ACCAATATAATGTACCAATGAAATAACATCTGGGACAATAGAACCCTGGTAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | ATACTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTAGTCATGACTGAAACTTaGTTTGATCTGGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILQFQKHMQTINNITRVLVMTET*FDLAAA Trigger: AGCAGCAGCCAGATCAAAGCAAGTTTCAGTCATGAC...TAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CCA 90 bp | TGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTCAGGCTTCTTTGTACTaGCTACTATATCAGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CKPSTTLPGFYCPRCYFIQASLY*LLYQVL Trigger: CAGAACCTGATATAGTAGCCAGTACAAAGAAGCCTG...AATGAAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CCA 90 bp | AGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGGATTAATACCTGTTaGCAACTTCTCTTCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFRNICKPSTTLPGFYCPRINTC*QLLFSK Trigger: CTTGCTGAAGAGAAGTTGCCAACAGGTATTAATCCT...GGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CCA 90 bp | GTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAAGGATTAATACCTGTTaGCAACTTCTCTTCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSETYANHQQHYQGSIVPRINTC*QLLFSK Trigger: CTTGCTGAAGAGAAGTTGCCAACAGGTATTAATCCT...TGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CCA 90 bp | CTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTTTATATTTGCAAAATaGTCGCTGCCGAAACGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQFQKHMQTINNITRVLLFIFAK*SLPKRC Trigger: GCACCGTTTCGGCAGCGACCATTTTGCAAATATAAA...CAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CCA 90 bp | CATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTATATCTGTCATCTCTTaGATGGAAAGCGATGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HMQTINNITRVLLSQMLFISVIS*MESDGS Trigger: ACTGCCATCGCTTTCCATCCAAGAGATGACAGATAT...AAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CCA 90 bp | AGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAACCCTTATACTTCATaGACAGTGATAGGTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFRNICKPSTTLPGFYCPNPYTS*TVIGLS Trigger: TGAGAGACCTATCACTGTCCATGAAGTATAAGGGTT...GGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR TCA 90 bp | GTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCACTTTGCTCTCTTCACTaGTTTTCCAAGGAATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSETYANHQQHYQGSIVPLCSLH*FSKEFL Trigger: AAGAAATTCCTTGGAAAATCAGTGAAGAGAGCAAAG...TGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR TCA 90 bp | TGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTGGAAAGCGATGGCAGTaGCAAAATCTATATGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CKPSTTLPGFYCPRCYFIGKRWQ*QNLYVE Trigger: TTCAACATATAGATTTTGTCACTGCCATCGCTTTCC...AATGAAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR TCA 90 bp | CATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTGGAAAGCGATGGCAGTaGCAAAATCTATATGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HMQTINNITRVLLSQMLFGKRWQ*QNLYVE Trigger: TTCAACATATAGATTTTGTCACTGCCATCGCTTTCC...AAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR TCA 90 bp | CTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGGTGATCAACTTTGTCTaGCCATCTACTTCATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LQFQKHMQTINNITRVLLVINFV*PSTSFH Trigger: ATGGAATGAAGTAGATGGTCAGACAAAGTTGATCAC...CAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR TCA 90 bp | CATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTGTGATCAACTTTGTCTaGCCATCTACTTCATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HMQTINNITRVLLSQMLFVINFV*PSTSFH Trigger: ATGGAATGAAGTAGATGGTCAGACAAAGTTGATCAC...AAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR TCA 90 bp | CATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTGGTACATTATATTGGTGCATATTTGCCATTCTaGCAAAAATTGGCAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HYQGSIVPDVISLVHYIGAYLPF*QKLAAV Trigger: CACAGCTGCCAATTTTTGTCAGAATGGCAAATATGC...ACCAATATAATGTACCAATGAAATAACATCTGGGACAATAGAACCCTGGTAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR TCA 90 bp | CATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTGGTACATTATATTGGTTCTGGCTGCTGCTATTaGCATAACCCTTATACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HYQGSIVPDVISLVHYIGSGCCY*HNPYTS Trigger: TGAAGTATAAGGGTTATGTCAATAGCAGCAGCCAGA...ACCAATATAATGTACCAATGAAATAACATCTGGGACAATAGAACCCTGGTAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR TCA 90 bp | ATACTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATCTGGCTGCTGCTATTaGCATAACCCTTATACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILQFQKHMQTINNITRVLSGCCY*HNPYTS Trigger: TGAAGTATAAGGGTTATGTCAATAGCAGCAGCCAGA...TAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | ATACTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTAATTTCCAGCTTGGTTTaGTGTATTCTCGGCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILQFQKHMQTINNITRVLISSLV*CILGFL Trigger: AAGGAAGCCGAGAATACAGCAAACCAAGCTGGAAAT...TAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | GTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCATCTTGTTGTAGTTCATaGTCTATGGCTAATAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSETYANHQQHYQGSIVPSCCSS*SMANSP Trigger: TGGACTATTAGCCATAGAGCATGAACTACAACAAGA...TGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | GTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCATTCTTTGACTTCCAATaGTTCCTTGTTCAGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSETYANHQQHYQGSIVPFFDFQ*FLVQCF Trigger: GAAACACTGAACAAGGAAGCATTGGAAGTCAAAGAA...TGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | CTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGACTGTGTGGCATCATTaGTTACATATTCCTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQFQKHMQTINNITRVLLTVWHH*LHIPLS Trigger: GGACAAAGGAATATGTAAGCAATGATGCCACACAGT...CAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | CTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTATTCCTCAGCAAGATaGTTTGCTCTCTTCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LQFQKHMQTINNITRVLLYSSAR*FALFTD Trigger: ATCAGTGAAGAGAGCAAAGCATCTTGCTGAGGAATA...CAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | CATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTTCCTTTGAAACCATGTaGTGCCTTGAATTTTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: HMQTINNITRVLLSQMLFSFETM*CLEFYW Trigger: CCAGTAAAATTCAAGGCAGCACATGGTTTCAAAGGA...AAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | AGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCTATGTCCTTTATATTTaGAAAATGGTCGCTGCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFRNICKPSTTLPGFYCPYVLYI*KMVAAE Trigger: TTCGGCAGCGACCATTTTGCAAATATAAAGGACATA...GGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CCA 90 bp | ATACTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTAAGTGAGAAAACTTCATaGTCCAAACAGCTCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: ILQFQKHMQTINNITRVLSEKTS*SKQLPC Trigger: ACATGGGAGCTGTTTGGACCATGAAGTTTTCTCACT...TAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CCA 90 bp | ATACTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTTATATTTGCAAAATaGTCGCTGCCGAAACGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILQFQKHMQTINNITRVLFIFAK*SLPKRC Trigger: GCACCGTTTCGGCAGCGACCATTTTGCAAATATAAA...TAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CCA 90 bp | CATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTGGTACATTATATTGGTATATCTGTCATCTCTTaGATGGAAAGCGATGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HYQGSIVPDVISLVHYIGISVIS*MESDGS Trigger: ACTGCCATCGCTTTCCATCCAAGAGATGACAGATAT...ACCAATATAATGTACCAATGAAATAACATCTGGGACAATAGAACCCTGGTAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CCA 90 bp | CATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTAACCCTTATACTTCATaGACAGTGATAGGTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HMQTINNITRVLLSQMLFNPYTS*TVIGLS Trigger: TGAGAGACCTATCACTGTCCATGAAGTATAAGGGTT...AAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR TCA 90 bp | TGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTAACATATTTATCTTCTaGACCGCTAACGAGGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CKPSTTLPGFYCPRCYFINIFIF*TANEVS Trigger: ACTTACCTCGTTAGCGGTTCAGAAGATAAATATGTT...AATGAAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | CATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTTCTTGTTGTAGTTCATaGTCTATGGCTAATAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HMQTINNITRVLLSQMLFSCCSS*SMANSP Trigger: TGGACTATTAGCCATAGAGCATGAACTACAACAAGA...AAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | CATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTGGTACATTATATTGGTTATTCCTCAGCAAGATaGTTTGCTCTCTTCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HYQGSIVPDVISLVHYIGYSSAR*FALFTD Trigger: ATCAGTGAAGAGAGCAAAGCATCTTGCTGAGGAATA...ACCAATATAATGTACCAATGAAATAACATCTGGGACAATAGAACCCTGGTAATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | CATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTTTTGAAACCATGTGCTaGCTTGAATTTTACTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HMQTINNITRVLLSQMLFFETMC*LEFYWS Trigger: AGACCAGTAAAATTCAAGGCAGCACATGGTTTCAAA...AAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATG 37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | ATACTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATCCTTTGAAACCATGTaGTGCCTTGAATTTTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: ILQFQKHMQTINNITRVLSFETM*CLEFYW Trigger: CCAGTAAAATTCAAGGCAGCACATGGTTTCAAAGGA...TAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | CATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTTATGTCCTTTATATTTaGAAAATGGTCGCTGCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: HMQTINNITRVLLSQMLFYVLYI*KMVAAE Trigger: TTCGGCAGCGACCATTTTGCAAATATAAAGGACATA...AAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | GTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCATCTCTTCTAGAAATGTaGCATAACCTGACTGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VSETYANHQQHYQGSIVPSLLEM*HNLTVL Trigger: TAAAACAGTCAGGTTATGGCACATTTCTAGAAGAGA...TGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | GTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAAACAACTGCATTATGTaGTTTAATACCTTCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSETYANHQQHYQGSIVPNNCIM*FNTFPE Trigger: TTCTGGGAAGGTATTAAAGCACATAATGCAGTTGTT...TGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | GTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCATCTAATTTTTCAGATTaGACATCCAAGGATAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: VSETYANHQQHYQGSIVPSNFSD*TSKDSI Trigger: GATGCTATCCTTGGATGTGCAATCTGAAAAATTAGA...TGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CCA 90 bp | CATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATCATCTGACTGTGTaGCATCATTGCTTACATATT | + |
|
Preference number: 4 (lower is better) Translates to: HMQTINNITRVLLSQMLFHHLTV*HHCLHI Trigger: AATATGTAAGCAATGATGCCACACAGTCAGATGATG...AAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CCA 90 bp | TGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTCATCATCTGACTGTGTaGCATCATTGCTTACATATT | + |
|
Preference number: 4 (lower is better) Translates to: CKPSTTLPGFYCPRCYFIHHLTV*HHCLHI Trigger: AATATGTAAGCAATGATGCCACACAGTCAGATGATG...AATGAAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CCA 90 bp | ATACTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATACTGGTCTTGTATATaGCATTCCTTCATCGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: ILQFQKHMQTINNITRVLYWSCI*HSFIVT Trigger: AGTGACGATGAAGGAATGCCATATACAAGACCAGTA...TAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAGTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR TCA 90 bp | ATACTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTAAACATATTTATCTTCTaGACCGCTAACGAGGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ILQFQKHMQTINNITRVLNIFIF*TANEVS Trigger: ACTTACCTCGTTAGCGGTTCAGAAGATAAATATGTT...TAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAGTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | ATACTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATACATTCTGACTTTCTaGCTTTTCGGAATCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILQFQKHMQTINNITRVLYILTF*LFGILL Trigger: CAACAAGATTCCGAAAAGGCAGAAAGTCAGAATGTA...TAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | ATACTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTCTTTGACTTCCAATaGTTCCTTGTTCAGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILQFQKHMQTINNITRVLFFDFQ*FLVQCF Trigger: GAAACACTGAACAAGGAAGCATTGGAAGTCAAAGAA...TAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAGTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | ATACTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTTGAAACCATGTGCTaGCTTGAATTTTACTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILQFQKHMQTINNITRVLFETMC*LEFYWS Trigger: AGACCAGTAAAATTCAAGGCAGCACATGGTTTCAAA...TAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | CTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCTCTTCTAGAAATGTaGCATAACCTGACTGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LQFQKHMQTINNITRVLLSLLEM*HNLTVL Trigger: TAAAACAGTCAGGTTATGGCACATTTCTAGAAGAGA...CAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | TGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTAACAACTGCATTATGTaGTTTAATACCTTCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CKPSTTLPGFYCPRCYFINNCIM*FNTFPE Trigger: TTCTGGGAAGGTATTAAAGCACATAATGCAGTTGTT...AATGAAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| 3UTR CAA 72 bp | CATATGCAAACCATCAACAACATTACCAGGGTTCTATaGTCCCAGATGTTATTTCATTGGTACATTATATTG | + |
|
Preference number: 4 (lower is better) Translates to: HMQTINNITRVL*SQMLFHWYIIL Trigger: CAATATAATGTACCAATGAAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR GCA 90 bp | CATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTGGTACATTATATTGGTTCTAATTTTTCAGATTaGACATCCAAGGATAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: HYQGSIVPDVISLVHYIGSNFSD*TSKDSI Trigger: GATGCTATCCTTGGATGTGCAATCTGAAAAATTAGA...ACCAATATAATGTACCAATGAAATAACATCTGGGACAATAGAACCCTGGTAATG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS GCA 90 bp | TCTCCCAGAGTTGGATCTAGGTCTCTGAGGGCCCATCACTTCACCTaGTACTGTCTGCACATCAGGTGCTTTTCCATTTTCCTGGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SPRVGSRSLRAHHFT*YCLHIRCFSIFLGS Trigger: ACTGCCCAGGAAAATGGAAAAGCACCTGATGTGCAGACAGTAGCAGGTGAAGTGATGGGCCCTCAGAGACCTAGATCCAACTCTGGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS TCA 90 bp | ATTTCCTCATCAGTAAGCTCTCTCCCAGAGTTGGATCTAGGTCTCTaGGGGCCCATCACTTCACCTGCTACTGTCTGCACATCAGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ISSSVSSLPELDLGL*GPITSPATVCTSGA Trigger: AGCACCTGATGTGCAGACAGTAGCAGGTGAAGTGATGGGCCCTCAGAGACCTAGATCCAACTCTGGGAGAGAGCTTACTGATGAGGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CAA 90 bp | GCGCGCAGGAACAGGCTTCTTTGTACTGGCTACTATATCAGGTTCTGGAGTAAGGGACTCATTTCCAGCTaGGTTTGCTGTATTCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: ARRNRLLCTGYYIRFWSKGLISS*VCCILG Trigger: GCCGAGAATACAGCAAACCAAGCTGGAAATGAGTCC...CTTACTCCAGAACCTGATATAGTAGCCAGTACAAAGAAGCCTGTTCCTGCGCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149483.2 |
||
| CDS TCA 90 bp | CTCACTATGTTGTCTTGTCCAGCTGAAGCAAGCAGTCGGCCACAGTaGGAAAACTTCATGGTCCAAACAGCTCCCATGTGTTCACCACTA | + |
|
Preference number: 5 (lower is better) Translates to: LTMLSCPAEASSRPQ*ENFMVQTAPMCSPL Trigger: TAGTGGTGAACACATGGGAGCTGTTTGGACCATGAAGTTTTCTCACTGTGGCCGACTGCTTGCTTCAGCTGGACAAGACAACATAGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS GCA 90 bp | AGCAGTATGTCCTTTATATTTGCAAAATGGTCGCTGCCGAAACGGTaGATTTTTGTCATCTGGGTCTTCGTCAGTTCCGCTACATACCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSMSFIFAKWSLPKR*IFVIWVFVSSATYP Trigger: GGGGTATGTAGCGGAACTGACGAAGACCCAGATGACAAAAATGCACCGTTTCGGCAGCGACCATTTTGCAAATATAAAGGACATACTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS GCA 90 bp | TCAAGGAGATCAGCAGTATGTCCTTTATATTTGCAAAATGGTCGCTaGCGAAACGGTGCATTTTTGTCATCTGGGTCTTCGTCAGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SRRSAVCPLYLQNGR*RNGAFLSSGSSSVP Trigger: CGGAACTGACGAAGACCCAGATGACAAAAATGCACCGTTTCGGCAGCGACCATTTTGCAAATATAAAGGACATACTGCTGATCTCCTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CAA 90 bp | CATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTGGACTCATTTCCAGCTaGGTTTGCTGTATTCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: HMQTINNITRVLLSQMLFGLISS*VCCILG Trigger: GCCGAGAATACAGCAAACCAAGCTGGAAATGAGTCC...AAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CAA 90 bp | CATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTGCATCAAACTTGGGTTaGGAGCAAAGATGGCTGACG | + |
|
Preference number: 5 (lower is better) Translates to: HMQTINNITRVLLSQMLFASNLG*EQRWLT Trigger: CGTCAGCCATCTTTGCTCCAAACCCAAGTTTGATGC...AAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CAA 90 bp | CATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTGGTACATTATATTGGTGGACTCATTTCCAGCTaGGTTTGCTGTATTCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: HYQGSIVPDVISLVHYIGGLISS*VCCILG Trigger: GCCGAGAATACAGCAAACCAAGCTGGAAATGAGTCC...ACCAATATAATGTACCAATGAAATAACATCTGGGACAATAGAACCCTGGTAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CAA 90 bp | GTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCACCTCAGCAAGATGCTTaGCTCTCTTCACTGATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSETYANHQQHYQGSIVPPQQDA*LSSLIF Trigger: GAAAATCAGTGAAGAGAGCAAAGCATCTTGCTGAGG...TGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CAA 90 bp | AGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAATATCTGTCATCTCTaGGATGGAAAGCGATGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SFRNICKPSTTLPGFYCPNICHL*DGKRWQ Trigger: CTGCCATCGCTTTCCATCCAAGAGATGACAGATATT...GGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CAA 90 bp | GTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCATTTCTTCCAACCTTGTaGCGTCCTCTAGTAGATCGT | + |
|
Preference number: 5 (lower is better) Translates to: VSETYANHQQHYQGSIVPFLPTL*RPLVDR Trigger: ACGATCTACTAGAGGACGCAACAAGGTTGGAAGAAA...TGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS TCA 90 bp | TCCCAATTACTGCATATTTGCCATTCTGACAAAAATTGGCAGCTGTaGTCAACTTTGTCTGACCATCTACTTCATTCCATAAAGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: SQLLHICHSDKNWQL*STLSDHLLHSIKPP Trigger: AGGTGGCTTTATGGAATGAAGTAGATGGTCAGACAAAGTTGATCACAGCTGCCAATTTTTGTCAGAATGGCAAATATGCAGTAATTGGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CAA 90 bp | GTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAATCTTGTCTCAATTCTaGTACAGGGGACTCATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSETYANHQQHYQGSIVPILSQF*YRGLIS Trigger: GGAAATGAGTCCCCTGTACAAGAATTGAGACAAGAT...TGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CAA 90 bp | AGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGAACATCACCTTCTTaGACTTCCAATGCTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SFRNICKPSTTLPGFYCPRTSPS*TSNASL Trigger: CAAGGAAGCATTGGAAGTCAAAGAAGGTGATGTTCT...GGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CAA 90 bp | AGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCGTATGTCCTTTATATTaGCAAAATGGTCGCTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SFRNICKPSTTLPGFYCPVCPLY*QNGRCR Trigger: TCGGCAGCGACCATTTTGCAAATATAAAGGACATAC...GGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CAA 90 bp | CTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGAATATCTGTCATCTCTaGGATGGAAAGCGATGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LQFQKHMQTINNITRVLLNICHL*DGKRWQ Trigger: CTGCCATCGCTTTCCATCCAAGAGATGACAGATATT...CAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CAA 90 bp | AGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCCATAAAGCCACCTTTTaGTCAGGTATGTTCCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: SFRNICKPSTTLPGFYCPHKATF*SGMFHR Trigger: CCTATGGAACATACCTGACAAAAAGGTGGCTTTATG...GGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS GCA 90 bp | CACTTTGATCTGATCAAAATCATAAGGTCCTTTGAAACCATGTGCTaGCTTGAATTTTACTGGTCTTGTATATGGCATTCCTTCATCGTC | + |
|
Preference number: 5 (lower is better) Translates to: HFDLIKIIRSFETMC*LEFYWSCIWHSFIV Trigger: GACGATGAAGGAATGCCATATACAAGACCAGTAAAATTCAAGGCAGCACATGGTTTCAAAGGACCTTATGATTTTGATCAGATCAAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS GCA 90 bp | CACCACTTTGATCTGATCAAAATCATAAGGTCCTTTGAAACCATGTaGTGCCTTGAATTTTACTGGTCTTGTATATGGCATTCCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: HHFDLIKIIRSFETM*CLEFYWSCIWHSFI Trigger: GATGAAGGAATGCCATATACAAGACCAGTAAAATTCAAGGCAGCACATGGTTTCAAAGGACCTTATGATTTTGATCAGATCAAAGTGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CAA 90 bp | TGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTATCTTGTCTCAATTCTaGTACAGGGGACTCATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CKPSTTLPGFYCPRCYFIILSQF*YRGLIS Trigger: GGAAATGAGTCCCCTGTACAAGAATTGAGACAAGAT...AATGAAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CAA 90 bp | CTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGACTTCCAATGCTTCCTaGTTCAGTGTTTCAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LQFQKHMQTINNITRVLLTSNAS*FSVSAS Trigger: AGAAGCTGAAACACTGAACAAGGAAGCATTGGAAGT...CAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CAA 90 bp | CATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTGGTACATTATATTGGTCCTCAGCAAGATGCTTaGCTCTCTTCACTGATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HYQGSIVPDVISLVHYIGPQQDA*LSSLIF Trigger: GAAAATCAGTGAAGAGAGCAAAGCATCTTGCTGAGG...ACCAATATAATGTACCAATGAAATAACATCTGGGACAATAGAACCCTGGTAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CAA 90 bp | TGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTTTCACCACTAAGATCTaGCACCACTTTGATCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: CKPSTTLPGFYCPRCYFIFTTKI*HHFDLI Trigger: GATCAGATCAAAGTGGTGCAAGATCTTAGTGGTGAA...AATGAAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CAA 90 bp | CTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTTCACCACTAAGATCTaGCACCACTTTGATCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: LQFQKHMQTINNITRVLLFTTKI*HHFDLI Trigger: GATCAGATCAAAGTGGTGCAAGATCTTAGTGGTGAA...CAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CAA 90 bp | CATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTGTATGTCCTTTATATTaGCAAAATGGTCGCTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: HMQTINNITRVLLSQMLFVCPLY*QNGRCR Trigger: TCGGCAGCGACCATTTTGCAAATATAAAGGACATAC...AAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
||
| CDS-3UTR CAA 90 bp | CATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATAAAGCCACCTTTTaGTCAGGTATGTTCCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: HMQTINNITRVLLSQMLFHKATF*SGMFHR Trigger: CCTATGGAACATACCTGACAAAAAGGTGGCTTTATG...AAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR CAA 90 bp | CATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTGGTACATTATATTGGTTTTCTTCCAACCTTGTaGCGTCCTCTAGTAGATCGT | + |
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Preference number: 5 (lower is better) Translates to: HYQGSIVPDVISLVHYIGFLPTL*RPLVDR Trigger: ACGATCTACTAGAGGACGCAACAAGGTTGGAAGAAA...ACCAATATAATGTACCAATGAAATAACATCTGGGACAATAGAACCCTGGTAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR CAA 90 bp | CATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTGGTACATTATATTGGTACTTCCAATGCTTCCTaGTTCAGTGTTTCAGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: HYQGSIVPDVISLVHYIGTSNAS*FSVSAS Trigger: AGAAGCTGAAACACTGAACAAGGAAGCATTGGAAGT...ACCAATATAATGTACCAATGAAATAACATCTGGGACAATAGAACCCTGGTAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR CAA 90 bp | CATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTGGTACATTATATTGGTAGAACATCACCTTCTTaGACTTCCAATGCTTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: HYQGSIVPDVISLVHYIGRTSPS*TSNASL Trigger: CAAGGAAGCATTGGAAGTCAAAGAAGGTGATGTTCT...ACCAATATAATGTACCAATGAAATAACATCTGGGACAATAGAACCCTGGTAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR CAA 90 bp | CTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGACGCGTCCTTCAGTATaGTATTTCATTCGCATATTG | + |
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Preference number: 5 (lower is better) Translates to: LQFQKHMQTINNITRVLLTRPSV*YFIRIL Trigger: CAATATGCGAATGAAATACAATACTGAAGGACGCGT...CAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR CAA 90 bp | AGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCTGTCTGTGTCAGATTTaGATGAACTTAGACTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: SFRNICKPSTTLPGFYCPCLCQI*MNLDFP Trigger: AGGAAAGTCTAAGTTCATCAAAATCTGACACAGACA...GGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR CAA 90 bp | TGCAAACCATCAACAACATTACCAGGGTTCTATTGTCCCAGATGTTATTTCATTATTTTTCTTCCAACCTaGTTGCGTCCTCTAGTAGAT | + |
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Preference number: 5 (lower is better) Translates to: CKPSTTLPGFYCPRCYFIIFLPT*LRPLVD Trigger: ATCTACTAGAGGACGCAACAAGGTTGGAAGAAAAAT...AATGAAATAACATCTGGGACAATAGAACCCTGGTAATGTTGTTGATGGTTTGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR CAA 90 bp | CTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGATTTTTCTTCCAACCTaGTTGCGTCCTCTAGTAGAT | + |
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Preference number: 5 (lower is better) Translates to: LQFQKHMQTINNITRVLLIFLPT*LRPLVD Trigger: ATCTACTAGAGGACGCAACAAGGTTGGAAGAAAAAT...CAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS GCA 90 bp | ACTTCAGCATCTTCATATTTATCAATCCCTTCTAATTTTTCAGATTaGACATCCAAGGATAGCATCAAACTTGGGTTTGGAGCAAAGATG | + |
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Preference number: 5 (lower is better) Translates to: TSASSYLSIPSNFSD*TSKDSIKLGFGAKM Trigger: CATCTTTGCTCCAAACCCAAGTTTGATGCTATCCTTGGATGTGCAATCTGAAAAATTAGAAGGGATTGATAAATATGAAGATGCTGAAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR CAA 90 bp | ATACTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTAAAACCATGTGCTGCCTaGAATTTTACTGGTCTTGTA | + |
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Preference number: 5 (lower is better) Translates to: ILQFQKHMQTINNITRVLKPCAA*NFTGLV Trigger: TACAAGACCAGTAAAATTCAAGGCAGCACATGGTTT...TAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR CAA 90 bp | ATACTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTAACGCGTCCTTCAGTATaGTATTTCATTCGCATATTG | + |
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Preference number: 5 (lower is better) Translates to: ILQFQKHMQTINNITRVLTRPSV*YFIRIL Trigger: CAATATGCGAATGAAATACAATACTGAAGGACGCGT...TAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAGTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS-3UTR CAA 90 bp | CTTCAGTTTCAGAAACATATGCAAACCATCAACAACATTACCAGGGTTCTATTGTGTCTGTGTCAGATTTaGATGAACTTAGACTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: LQFQKHMQTINNITRVLLCLCQI*MNLDFP Trigger: AGGAAAGTCTAAGTTCATCAAAATCTGACACAGACA...CAATAGAACCCTGGTAATGTTGTTGATGGTTTGCATATGTTTCTGAAACTGAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS TCA 72 bp | TCAGTAAGCTCTCTCCCAGAGTTGGATCTAGGTCTCTaGGGGCCCATCACTTCACCTGCTACTGTCTGCACA | + |
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Preference number: 6 (lower is better) Translates to: SVSSLPELDLGL*GPITSPATVCT Trigger: TGTGCAGACAGTAGCAGGTGAAGTGATGGGCCCTCAGAGACCTAGATCCAACTCTGGGAGAGAGCTTACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS TCA 72 bp | TTGTCTTGTCCAGCTGAAGCAAGCAGTCGGCCACAGTaGGAAAACTTCATGGTCCAAACAGCTCCCATGTGT | + |
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Preference number: 6 (lower is better) Translates to: LSCPAEASSRPQ*ENFMVQTAPMC Trigger: ACACATGGGAGCTGTTTGGACCATGAAGTTTTCTCACTGTGGCCGACTGCTTGCTTCAGCTGGACAAGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS GCA 72 bp | GTTGGATCTAGGTCTCTGAGGGCCCATCACTTCACCTaGTACTGTCTGCACATCAGGTGCTTTTCCATTTTC | + |
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Preference number: 6 (lower is better) Translates to: VGSRSLRAHHFT*YCLHIRCFSIF Trigger: GAAAATGGAAAAGCACCTGATGTGCAGACAGTAGCAGGTGAAGTGATGGGCCCTCAGAGACCTAGATCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS CAA 90 bp | GGTCTTCGTCAGTTCCGCTACATACCCCCATGTCTGTGTCAGATTTaGATGAACTTAGACTTTCCTGAGATGGTGAAGGTGACACGCGTC | + |
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Preference number: 6 (lower is better) Translates to: GLRQFRYIPPCLCQI*MNLDFPEMVKVTRV Trigger: GACGCGTGTCACCTTCACCATCTCAGGAAAGTCTAAGTTCATCAAAATCTGACACAGACATGGGGGTATGTAGCGGAACTGACGAAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS CAA 72 bp | TCAATTCTTGTACAGGGGACTCATTTCCAGCTTGGTTaGCTGTATTCTCGGCTTCCCTACAGGATAGCCGGT | + |
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Preference number: 6 (lower is better) Translates to: SILVQGTHFQLG*LYSRLPYRIAG Trigger: ACCGGCTATCCTGTAGGGAAGCCGAGAATACAGCAAACCAAGCTGGAAATGAGTCCCCTGTACAAGAATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149483.2 |
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| CDS CAA 72 bp | TATTTGCAAAATGGTCGCTGCCGAAACGGTGCATTTTaGTCATCTGGGTCTTCGTCAGTTCCGCTACATACC | + |
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Preference number: 6 (lower is better) Translates to: YLQNGRCRNGAF*SSGSSSVPLHT Trigger: GGTATGTAGCGGAACTGACGAAGACCCAGATGACAAAAATGCACCGTTTCGGCAGCGACCATTTTGCAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS GCA 72 bp | TCCTTTATATTTGCAAAATGGTCGCTGCCGAAACGGTaGATTTTTGTCATCTGGGTCTTCGTCAGTTCCGCT | + |
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Preference number: 6 (lower is better) Translates to: SFIFAKWSLPKR*IFVIWVFVSSA Trigger: AGCGGAACTGACGAAGACCCAGATGACAAAAATGCACCGTTTCGGCAGCGACCATTTTGCAAATATAAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS GCA 72 bp | TCAGCAGTATGTCCTTTATATTTGCAAAATGGTCGCTaGCGAAACGGTGCATTTTTGTCATCTGGGTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: SAVCPLYLQNGR*RNGAFLSSGSS Trigger: CGAAGACCCAGATGACAAAAATGCACCGTTTCGGCAGCGACCATTTTGCAAATATAAAGGACATACTGCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS TCA 72 bp | ATGTCTGTGTCAGATTTTGATGAACTTAGACTTTCCTaGGATGGTGAAGGTGACACGCGTCCTTCAGTATTG | + |
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Preference number: 6 (lower is better) Translates to: MSVSDFDELRLS*DGEGDTRPSVL Trigger: CAATACTGAAGGACGCGTGTCACCTTCACCATCTCAGGAAAGTCTAAGTTCATCAAAATCTGACACAGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS CAA 90 bp | TTAGACCATGAAAGATCAAGGAGATCAGCAGTATGTCCTTTATATTaGCAAAATGGTCGCTGCCGAAACGGTGCATTTTTGTCATCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LDHERSRRSAVCPLY*QNGRCRNGAFLSSG Trigger: CCCAGATGACAAAAATGCACCGTTTCGGCAGCGACCATTTTGCAAATATAAAGGACATACTGCTGATCTCCTTGATCTTTCATGGTCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS CAA 72 bp | GAAAGATCAAGGAGATCAGCAGTATGTCCTTTATATTaGCAAAATGGTCGCTGCCGAAACGGTGCATTTTTG | + |
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Preference number: 6 (lower is better) Translates to: ERSRRSAVCPLY*QNGRCRNGAFL Trigger: CAAAAATGCACCGTTTCGGCAGCGACCATTTTGCAAATATAAAGGACATACTGCTGATCTCCTTGATCTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS CAA 90 bp | AAACTTCATGGTCCAAACAGCTCCCATGTGTTCACCACTAAGATCTaGCACCACTTTGATCTGATCAAAATCATAAGGTCCTTTGAAACC | + |
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Preference number: 6 (lower is better) Translates to: KLHGPNSSHVFTTKI*HHFDLIKIIRSFET Trigger: GGTTTCAAAGGACCTTATGATTTTGATCAGATCAAAGTGGTGCAAGATCTTAGTGGTGAACACATGGGAGCTGTTTGGACCATGAAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS TCA 72 bp | TCATGGACAGTGATAGGTCTCTCAGATCATACAGTCTaGTTCTGGAGTCATTTGAGGTTACCAGTATCTTAT | + |
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Preference number: 6 (lower is better) Translates to: SWTVIGLSDHTV*FWSHLRLPVSY Trigger: ATAAGATACTGGTAACCTCAAATGACTCCAGAATCAGACTGTATGATCTGAGAGACCTATCACTGTCCATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS GCA 72 bp | TCATTGCTTACATATTCCTTTGTCCTTCTCATGATGTaGAGAGTGAGAGGATTAATACCTGTTGGCAACTTC | + |
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Preference number: 6 (lower is better) Translates to: SLLTYSFVLLMM*RVRGLIPVGNF Trigger: GAAGTTGCCAACAGGTATTAATCCTCTCACTCTGCACATCATGAGAAGGACAAAGGAATATGTAAGCAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS CAA 90 bp | TCTCCAGGTAAAGGTTCAATGCCAGTAATTTTTCTTCCAACCTTGTaGCGTCCTCTAGTAGATCGTACATGTATTTGTGTATGGTATTTC | + |
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Preference number: 6 (lower is better) Translates to: SPGKGSMPVIFLPTL*RPLVDRTCICVWYF Trigger: GAAATACCATACACAAATACATGTACGATCTACTAGAGGACGCAACAAGGTTGGAAGAAAAATTACTGGCATTGAACCTTTACCTGGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS GCA 72 bp | CTGATCAAAATCATAAGGTCCTTTGAAACCATGTGCTaGCTTGAATTTTACTGGTCTTGTATATGGCATTCC | + |
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Preference number: 6 (lower is better) Translates to: LIKIIRSFETMC*LEFYWSCIWHS Trigger: GGAATGCCATATACAAGACCAGTAAAATTCAAGGCAGCACATGGTTTCAAAGGACCTTATGATTTTGATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS CAA 72 bp | TTACTGGTCTTGTATATGGCATTCCTTCATCGTCACTaGATGAAGGGTCATCTTGATCAGTATGAAACACTT | + |
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Preference number: 6 (lower is better) Translates to: LLVLYMAFLHRH*MKGHLDQYETL Trigger: AAGTGTTTCATACTGATCAAGATGACCCTTCATCAAGTGACGATGAAGGAATGCCATATACAAGACCAGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS CAA 72 bp | GGTAAAGGTTCAATGCCAGTAATTTTTCTTCCAACCTaGTTGCGTCCTCTAGTAGATCGTACATGTATTTGT | + |
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Preference number: 6 (lower is better) Translates to: GKGSMPVIFLPT*LRPLVDRTCIC Trigger: ACAAATACATGTACGATCTACTAGAGGACGCAACAAGGTTGGAAGAAAAATTACTGGCATTGAACCTTTACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS CAA 90 bp | TTTTCTCCAGGTAAAGGTTCAATGCCAGTAATTTTTCTTCCAACCTaGTTGCGTCCTCTAGTAGATCGTACATGTATTTGTGTATGGTAT | + |
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Preference number: 6 (lower is better) Translates to: FSPGKGSMPVIFLPT*LRPLVDRTCICVWY Trigger: ATACCATACACAAATACATGTACGATCTACTAGAGGACGCAACAAGGTTGGAAGAAAAATTACTGGCATTGAACCTTTACCTGGAGAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS CAA 72 bp | AAAGGTTCAATGCCAGTAATTTTTCTTCCAACCTTGTaGCGTCCTCTAGTAGATCGTACATGTATTTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: KGSMPVIFLPTL*RPLVDRTCICV Trigger: TACACAAATACATGTACGATCTACTAGAGGACGCAACAAGGTTGGAAGAAAAATTACTGGCATTGAACCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS CAA 90 bp | AATAATACTTTCAATTATCTTTTTAGATACATCTTGTCTCAATTCTaGTACAGGGGACTCATTTCCAGCTTGGTTTGCTGTATTCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: NNTFNYLFRYILSQF*YRGLISSLVCCILG Trigger: GCCGAGAATACAGCAAACCAAGCTGGAAATGAGTCCCCTGTACAAGAATTGAGACAAGATGTATCTAAAAAGATAATTGAAAGTATTATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS TCA 72 bp | ATGGTACGTACTCCAGATATAAACATATTTATCTTCTaGACCGCTAACGAGGTAAGTAAAGTCATGACTGAA | + |
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Preference number: 6 (lower is better) Translates to: MVRTPDINIFIF*TANEVSKVMTE Trigger: TTCAGTCATGACTTTACTTACCTCGTTAGCGGTTCAGAAGATAAATATGTTTATATCTGGAGTACGTACCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS CAA 72 bp | TTCAATTATCTTTTTAGATACATCTTGTCTCAATTCTaGTACAGGGGACTCATTTCCAGCTTGGTTTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: FNYLFRYILSQF*YRGLISSLVCC Trigger: ACAGCAAACCAAGCTGGAAATGAGTCCCCTGTACAAGAATTGAGACAAGATGTATCTAAAAAGATAATTGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS CAA 72 bp | TTTGTAGTTAGCAGAGAATCAGATGTAATATTTTCTTaGGGTACATCCAGATCAGGTGTTTTAAGAGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: FVVSRESDVIFS*GTSRSGVLRAS Trigger: TGAGGCTCTTAAAACACCTGATCTGGATGTACCCAAAGAAAATATTACATCTGATTCTCTGCTAACTACAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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| CDS GCA 72 bp | TCTTCATATTTATCAATCCCTTCTAATTTTTCAGATTaGACATCCAAGGATAGCATCAAACTTGGGTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: SSYLSIPSNFSD*TSKDSIKLGFG Trigger: TCCAAACCCAAGTTTGATGCTATCCTTGGATGTGCAATCTGAAAAATTAGAAGGGATTGATAAATATGAAGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035766.13 ENSMUST00000101670.3 |
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