Pregenerated sensors for WDR4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024037Ensembl transcript IDs: ENSMUST00000170176.9, ENSMUST00000171171.9, ENSMUST00000172284.9, ENSMUST00000236665.2
Found 245 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTGGGCATCCCAGTaGAAGTGGGGAGCTGCTGCTGGAGGTGGAGGCATCCTGACACAA | + |
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Preference number: 1 (lower is better) Translates to: GGQPFGNDPGNWASQ*KWGAAAGGGGILTQ Trigger: TTGTGTCAGGATGCCTCCACCTCCAGCAGCAGCTCCCCACTTCCACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR CCA 90 bp | TTATCAGAGACTGGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTaGGCATCCCAGTGGAAGTGGGGAGCTGCTGCTGGAGGTGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: LSETGGQPFGNDPGN*ASQWKWGAAAGGGG Trigger: GCCTCCACCTCCAGCAGCAGCTCCCCACTTCCACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR CCA 90 bp | TGTGTCATTGCCAGTGTGTCCGGCCTGCCTCCTGCTTGTGGAAGATaGGAGCTCTCAACTGGGGCTCCAGCCTCCCTTCCACCAGCATGG | + |
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Preference number: 1 (lower is better) Translates to: CVIASVSGLPPACGR*ELSTGAPASLPPAW Trigger: CCATGCTGGTGGAAGGGAGGCTGGAGCCCCAGTTGAGAGCTCCCATCTTCCACAAGCAGGAGGCAGGCCGGACACACTGGCAATGACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR TCA 90 bp | GATACCCCTCGAGTCTCTCAGCTCCTTGCACTGACCATCCGGCCATaGCGGCCCTGTGAGGACTGGTGCTTTGCAAGCATGGGCTCTACC | + |
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Preference number: 1 (lower is better) Translates to: DTPRVSQLLALTIRP*RPCEDWCFASMGST Trigger: GGTAGAGCCCATGCTTGCAAAGCACCAGTCCTCACAGGGCCGTCATGGCCGGATGGTCAGTGCAAGGAGCTGAGAGACTCGAGGGGTATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR CCA 90 bp | TGGTGTCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAACGACCCTaGCAACTGGGCATCCCAGTGGAAGTGGGGAGCTGCTGCTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: WCLIRDWWAAFWERP*QLGIPVEVGSCCWR Trigger: CCTCCAGCAGCAGCTCCCCACTTCCACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGACACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR CCA 90 bp | AATGAGAGCTGTGGCCATGTCCAAGGTCAGCAACTAAGGGCTGACTaGCCCGGGCACGCCTTTTTGGTCTGTTCCGGGGACCCTGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: NESCGHVQGQQLRAD*PGHAFLVCSGDPGK Trigger: CTTCCCAGGGTCCCCGGAACAGACCAAAAAGGCGTGCCCGGGCCAGTCAGCCCTTAGTTGCTGACCTTGGACATGGCCACAGCTCTCATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR CCA 90 bp | TTGTTGATGTGTCATTGCCAGTGTGTCCGGCCTGCCTCCTGCTTGTaGAAGATGGGAGCTCTCAACTGGGGCTCCAGCCTCCCTTCCACC | + |
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Preference number: 1 (lower is better) Translates to: LLMCHCQCVRPASCL*KMGALNWGSSLPST Trigger: GGTGGAAGGGAGGCTGGAGCCCCAGTTGAGAGCTCCCATCTTCCACAAGCAGGAGGCAGGCCGGACACACTGGCAATGACACATCAACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR GCA 90 bp | CTCTACCTGGCTCGCAGGCTACGCATGACCAGAGGACTGAGCGAATaGAGCACTGGCTCAGCAAAGCTGTATTCCTGGGCCCTCAGACTT | + |
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Preference number: 1 (lower is better) Translates to: LYLARRLRMTRGLSE*STGSAKLYSWALRL Trigger: AAGTCTGAGGGCCCAGGAATACAGCTTTGCTGAGCCAGTGCTGCATTCGCTCAGTCCTCTGGTCATGCGTAGCCTGCGAGCCAGGTAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR CCA 90 bp | ACTGGGGCTCCAGCCTCCCTTCCACCAGCATGGCCCCCAACCCTCTaGAACTGCAAGGCCAGTCAATCTCTCTCATATAAATTGCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: TGAPASLPPAWPPTL*NCKASQSLSYKLPW Trigger: CCAAGGCAATTTATATGAGAGAGATTGACTGGCCTTGCAGTTCCAGAGGGTTGGGGGCCATGCTGGTGGAAGGGAGGCTGGAGCCCCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR TCA 90 bp | TGCTCAGTCTGCTCAGCCCAGCCCAGGAGTGCGAACAGCACCAACTaGATCTGCCTCAAAACAGCAAGCAGCTACAGAGCCATACAGAGC | + |
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Preference number: 1 (lower is better) Translates to: CSVCSAQPRSANSTN*ICLKTASSYRAIQS Trigger: GCTCTGTATGGCTCTGTAGCTGCTTGCTGTTTTGAGGCAGATTCAGTTGGTGCTGTTCGCACTCCTGGGCTGGGCTGAGCAGACTGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
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| 3UTR TCA 90 bp | GAAGTGGGGAGCTGCTGCTGGAGGTGGAGGCATCCTGACACAAGCTaGAATCATAGCATGAACTGCCCAGGTCAGACTGGCCTAAAACCA | + |
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Preference number: 1 (lower is better) Translates to: EVGSCCWRWRHPDTS*NHSMNCPGQTGLKP Trigger: TGGTTTTAGGCCAGTCTGACCTGGGCAGTTCATGCTATGATTTCAGCTTGTGTCAGGATGCCTCCACCTCCAGCAGCAGCTCCCCACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR GCA 90 bp | GCTCCAGCCTCCCTTCCACCAGCATGGCCCCCAACCCTCTGGAACTaGAAGGCCAGTCAATCTCTCTCATATAAATTGCCTTGGTGTCTT | + |
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Preference number: 1 (lower is better) Translates to: APASLPPAWPPTLWN*KASQSLSYKLPWCL Trigger: AAGACACCAAGGCAATTTATATGAGAGAGATTGACTGGCCTTGCAGTTCCAGAGGGTTGGGGGCCATGCTGGTGGAAGGGAGGCTGGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR CCA 90 bp | TACCCCACCCTTAGTGCTTCCACTGGCTACACTCACACAAGTAAGTaGACCCTGGGACATGCACAGATGTCACTGTGGCATAGGACAATC | + |
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Preference number: 1 (lower is better) Translates to: YPTLSASTGYTHTSK*TLGHAQMSLWHRTI Trigger: GATTGTCCTATGCCACAGTGACATCTGTGCATGTCCCAGGGTCCACTTACTTGTGTGAGTGTAGCCAGTGGAAGCACTAAGGGTGGGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR GCA 90 bp | AGATGTTTAGAAGGATTAGGACTTAGGGCCTTGTTGATGTGTCATTaGCAGTGTGTCCGGCCTGCCTCCTGCTTGTGGAAGATGGGAGCT | + |
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Preference number: 1 (lower is better) Translates to: RCLEGLGLRALLMCH*QCVRPASCLWKMGA Trigger: AGCTCCCATCTTCCACAAGCAGGAGGCAGGCCGGACACACTGGCAATGACACATCAACAAGGCCCTAAGTCCTAATCCTTCTAAACATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR GCA 90 bp | CAACCCTCTGGAACTGCAAGGCCAGTCAATCTCTCTCATATAAATTaGCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAAC | + |
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Preference number: 1 (lower is better) Translates to: QPSGTARPVNLSHIN*LGVLSETGGQPFGN Trigger: GTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTTATATGAGAGAGATTGACTGGCCTTGCAGTTCCAGAGGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR GCA 90 bp | AGTACAGGGGCCAAACTAACTAAACTGACAAAGGAGAGAGCTGTGTaGACTGATCTGGATGGGAACGGTCCCCAGTGTTGGAGATGTTTA | + |
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Preference number: 1 (lower is better) Translates to: STGAKLTKLTKERAV*TDLDGNGPQCWRCL Trigger: TAAACATCTCCAACACTGGGGACCGTTCCCATCCAGATCAGTGCACACAGCTCTCTCCTTTGTCAGTTTAGTTAGTTTGGCCCCTGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR GCA 90 bp | ATTGATGCTGTGATTTCTGTTCATTTCCTTCTGTTCTGCAGTGTATaGAGAGTTCAGAGCAACAGAACCACGAGGTCACCATCATTCCCT | + |
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Preference number: 1 (lower is better) Translates to: IDAVISVHFLLFCSV*RVQSNRTTRSPSFP Trigger: AGGGAATGATGGTGACCTCGTGGTTCTGTTGCTCTGAACTCTGCATACACTGCAGAACAGAAGGAAATGAACAGAAATCACAGCATCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
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| 3UTR TCA 90 bp | CATACACACATTGAATGTCTTAAGATCAGCTATGGAGGCTGCTGCTaGACATTCCAGAAAGCTATGCAAAGTTTGTCTTTATTGATGCTG | + |
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Preference number: 1 (lower is better) Translates to: HTHIECLKISYGGCC*TFQKAMQSLSLLML Trigger: CAGCATCAATAAAGACAAACTTTGCATAGCTTTCTGGAATGTTCAGCAGCAGCCTCCATAGCTGATCTTAAGACATTCAATGTGTGTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | CTGTTCCGGGGACCCTGGGAAGGGGCTCCTTTGCCGCTTCTTCTTCAGCTGCTGCCCCCGGCAATGATGTaGAGGCAGGTCCTGTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: LFRGPWEGAPLPLLLQLLPPAMM*RQVLSC Trigger: GCAGGACAGGACCTGCCTTCACATCATTGCCGGGGG...CAGCAGCTGAAGAAGAAGCGGCAAAGGAGCCCCTTCCCAGGGTCCCCGGAACAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTGGGCATCCCAGTGGAAGTGGCAGGACTGGGATTGTTaGGGTGGGCCTGCCTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: GGQPFGNDPGNWASQWKWQDWDC*GGPACC Trigger: GCAGCAGGCAGGCCCACCCCAACAATCCCAGTCCTG...CCACTTCCACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGCAAGGTCACACCCTCAGAGCCCCAAAGCTTGCTCAGTCTGCTCAGCCCCAACCCCTTGTGGCCTaGCTGCTCTCCAGGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: AWQGHTLRAPKLAQSAQPQPLVA*LLSRLL Trigger: CAGGAGCCTGGAGAGCAGCCAGGCCACAAGGGGTTG...GGGCTGAGCAGACTGAGCAAGCTTTGGGGCTCTGAGGGTGTGACCTTGCCAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | CCCCATCACTGTCTGTGTGGCTGTCTCAGAGCCTACAAGGCAGACACCAGGGACCTGACCATCCGGCCATaGCGGCCCTGTGAGGACTGG | + |
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Preference number: 2 (lower is better) Translates to: PHHCLCGCLRAYKADTRDLTIRP*RPCEDW Trigger: CCAGTCCTCACAGGGCCGTCATGGCCGGATGGTCAG...GTCCCTGGTGTCTGCCTTGTAGGCTCTGAGACAGCCACACAGACAGTGATGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTCTCCAGGCTCCTGTAGGCCGGCCAGGTCACAGCACTGCAGCTGCCTACAGCAGCAGTTCAGGATaGCTGGGCACTACAAGGATG | + |
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Preference number: 2 (lower is better) Translates to: AALQAPVGRPGHSTAAAYSSSSG*LGTTRM Trigger: CATCCTTGTAGTGCCCAGTCATCCTGAACTGCTGCT...GTAGGCAGCTGCAGTGCTGTGACCTGGCCGGCCTACAGGAGCCTGGAGAGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | CTCCTGCTTGTGGAAGATGGGAGCTCTCAACTGGGGCTCCAGCCTCCCTTCCACGCATCCCAGTGGAAGTaGGGAGCTGCTGCTGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: LLLVEDGSSQLGLQPPFHASQWK*GAAAGG Trigger: ACCTCCAGCAGCAGCTCCCCACTTCCACTGGGATGC...GTGGAAGGGAGGCTGGAGCCCCAGTTGAGAGCTCCCATCTTCCACAAGCAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | GCTGCTGTCTGCTGGCATCAAGCTGGAAGACGAAGACCACGGGAACGCACTCACCAACCCCTTGTGGCCTaGCTGCTCTCCAGGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: AAVCWHQAGRRRPRERTHQPLVA*LLSRLL Trigger: CAGGAGCCTGGAGAGCAGCCAGGCCACAAGGGGTTG...GTGAGTGCGTTCCCGTGGTCTTCGTCTTCCAGCTTGATGCCAGCAGACAGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR CAA 90 bp | AAACAAGGCTGGCCTGGCAAGGTCACACCCTCAGAGCCCCAAAGCTaGCTCAGTCTGCTCAGCCCAGCCCAGGAGTGCGAACAGCACCAA | + |
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Preference number: 2 (lower is better) Translates to: KQGWPGKVTPSEPQS*LSLLSPAQECEQHQ Trigger: TTGGTGCTGTTCGCACTCCTGGGCTGGGCTGAGCAGACTGAGCAAGCTTTGGGGCTCTGAGGGTGTGACCTTGCCAGGCCAGCCTTGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCATCACTGTCTGTGTGGCTGTCTCAGAGCCTACAAGGCAGACACCAGGGACGAGAGCCCCCGGCAATaGTGTGAAGGCAGGTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: PHHCLCGCLRAYKADTRDESPRQ*CEGRSC Trigger: ACAGGACCTGCCTTCACATCATTGCCGGGGGCTCTC...GTCCCTGGTGTCTGCCTTGTAGGCTCTGAGACAGCCACACAGACAGTGATGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGAGAGCTGCCCACAGGGCCTCAGGAATGAGAGCTGTGGCCATGTCCAAGGTAAGTCAGCCGCTGTCTaGACACCAGCTGCTGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: GESCPQGLRNESCGHVQGKSAAV*TPAAVC Trigger: GCAGACAGCAGCTGGTGTTCAGACAGCGGCTGACTT...ACCTTGGACATGGCCACAGCTCTCATTCCTGAGGCCCTGTGGGCAGCTCTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | CTTATCAGAGACTGGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTGGGCATCACCACCTGCCTTCCCTaGAACCCGGCAGGAGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LIRDWWAAFWERPWQLGITTCLP*NPAGAC Trigger: ACAGGCTCCTGCCGGGTTGCAGGGAAGGCAGGTGGT...GATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | AGACAGGACTGGGATTGTTGGGGTGGGCCTGCCTGCTGCTCACTATGCTGTTTGACCACCTGCCTTCCCTaGAACCCGGCAGGAGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: RQDWDCWGGPACCSLCCLTTCLP*NPAGAC Trigger: ACAGGCTCCTGCCGGGTTGCAGGGAAGGCAGGTGGT...CAAACAGCATAGTGAGCAGCAGGCAGGCCCACCCCAACAATCCCAGTCCTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTGGGCATCCCAGTGGAAGTGGGTGGACCCTGGGACATaGACAGATGTCACTGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: GGQPFGNDPGNWASQWKWVDPGT*TDVTVA Trigger: TGCCACAGTGACATCTGTGCATGTCCCAGGGTCCAC...CCACTTCCACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | ACTCGGGTCTCATCTCCCCAACCCAAGACGGTCTCTGCTGCAGCTCGTCTGGGAAAAGACTCGATGCTATaGGGGGCAGCAGCCCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: TRVSSPQPKTVSAAARLGKDSML*GAAAQL Trigger: CAGCTGGGCTGCTGCCCCGCATAGCATCGAGTCTTT...TCCCAGACGAGCTGCAGCAGAGACCGTCTTGGGTTGGGGAGATGAGACCCGAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTGGGCATCCCAGTGGAAGTGGTCACAGCACTGCAGCTaGCTACCGCTTCTGTACTCC | + |
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Preference number: 2 (lower is better) Translates to: GGQPFGNDPGNWASQWKWSQHCS*LPLLYS Trigger: GGAGTACAGAAGCGGTAGGCAGCTGCAGTGCTGTGA...CCACTTCCACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTGGGCATCCCAGTGGAAGTGGTTTTGGGAACGACCCTaGCAACTGGGCATCCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: GGQPFGNDPGNWASQWKWFWERP*QLGIPV Trigger: CACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAA...CCACTTCCACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | AGCTCTAGACTCTTAGCTAAGCTAACACCACCTGCCTTCCCTGCAACCCGGCAGCCCCCGGCAATGATGTaGAGGCAGGTCCTGTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SSRLLAKLTPPAFPATRQPPAMM*RQVLSC Trigger: GCAGGACAGGACCTGCCTTCACATCATTGCCGGGGG...CTGCCGGGTTGCAGGGAAGGCAGGTGGTGTTAGCTTAGCTAAGAGTCTAGAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTGGGCATCCCAGTGGAAGTGGGGAATAACCCCACCATaGAGGCCACCATCTCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: GGQPFGNDPGNWASQWKWGITPP*RPPSLL Trigger: AAGGAGAGATGGTGGCCTTCATGGTGGGGTTATTCC...CCACTTCCACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | ACTCGGGTCTCATCTCCCCAACCCAAGACGGTCTCTGCTGCAGCTCGTCTGGGAAAAGCTTGCTCAGTCTaGTCAGCCCAGCCCAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: TRVSSPQPKTVSAAARLGKACSV*SAQPRS Trigger: ACTCCTGGGCTGGGCTGAGCAGACTGAGCAAGCTTT...TCCCAGACGAGCTGCAGCAGAGACCGTCTTGGGTTGGGGAGATGAGACCCGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGACTGGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTGGGCATCCCAGTGAGTCTCTCAGCTCCTTaGACTGACCATCCGGCCATG | + |
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Preference number: 2 (lower is better) Translates to: RDWWAAFWERPWQLGIPVSLSAP*TDHPAM Trigger: CATGGCCGGATGGTCAGTGCAAGGAGCTGAGAGACT...CACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | ACTCAGTGTGTCCCAGGCAGAAAGACTCGATGCTATGCGGGGCAGCAGCCCAGCCCCAGAGTCTCAGGGTaGCATCCCCAGAGGAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: TQCVPGRKTRCYAGQQPSPRVSG*HPQRKK Trigger: TTTCTTCCTCTGGGGATGGCACCCTGAGACTCTGGG...GCTGGGCTGCTGCCCCGCATAGCATCGAGTCTTTCTGCCTGGGACACACTGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | TCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGGTCACACCCTCAGAGCCCCAACCCTTGTGGCCTGGCTaGTCTCCAGGCTCCTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: SFPVKQGWPGKVTPSEPQPLWPG*SPGSCR Trigger: CCTACAGGAGCCTGGAGAGCAGCCAGGCCACAAGGG...TTGGGGCTCTGAGGGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | CAGAGCCAGATGGTAGGACATGGAGGCCCAACACCCTCCTCTACCCCACCCTTAGGGAAGGGGCTCCTTTaGCGCTTCTTCTTCAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: QSQMVGHGGPTPSSTPPLGKGLL*RFFFSC Trigger: GCAGCTGAAGAAGAAGCGGCAAAGGAGCCCCTTCCC...TAAGGGTGGGGTAGAGGAGGGTGTTGGGCCTCCATGTCCTACCATCTGGCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTTTGGGAACGACCCTGGCAACTGGGCATCCCAGTGGAAGTGGGGAGCTGAAGTGGAGACAGGACTaGGATTGTTGGGGTGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: SLLGTTLATGHPSGSGELKWRQD*DCWGGP Trigger: AGGCCCACCCCAACAATCCCAGTCCTGTCTCCACTT...CAGCTCCCCACTTCCACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | ACGAGGTCACCATCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGGTCACACCCGAGAGCCCCCGGCAATaGTGTGAAGGCAGGTCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: TRSPSFPVKQGWPGKVTPESPRQ*CEGRSC Trigger: ACAGGACCTGCCTTCACATCATTGCCGGGGGCTCTC...GGGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGATGGTGACCTCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGCAAGGTCACACCCTCAGAGCCCCAAAGCTTGCTCAGTCTGCTCAGCCCGCGAACAGCACCAACTaGATCTGCCTCAAAACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: AWQGHTLRAPKLAQSAQPANSTN*ICLKTA Trigger: TGCTGTTTTGAGGCAGATTCAGTTGGTGCTGTTCGC...GGGCTGAGCAGACTGAGCAAGCTTTGGGGCTCTGAGGGTGTGACCTTGCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
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| 3UTR-3UTR GCA 90 bp | ACATGCGTGGTGCTGTGGGCCAGTGTATCCTTCAATGTGAAGGTGCTTCCACACACCACCTGCCTTCCCTaGAACCCGGCAGGAGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: TCVVLWASVSFNVKVLPHTTCLP*NPAGAC Trigger: ACAGGCTCCTGCCGGGTTGCAGGGAAGGCAGGTGGT...GTGTGGAAGCACCTTCACATTGAAGGATACACTGGCCCACAGCACCACGCATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGACAGGACTGGGATTGTTGGGGTGGGCCTGCCTGCTGCTCACTATGCTGTTAAAGCTTGCTCAGTCTaGTCAGCCCAGCCCAGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: GDRTGIVGVGLPAAHYAVKACSV*SAQPRS Trigger: ACTCCTGGGCTGGGCTGAGCAGACTGAGCAAGCTTT...AACAGCATAGTGAGCAGCAGGCAGGCCCACCCCAACAATCCCAGTCCTGTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGACTGGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTGGGCATCCCAGTGAGAGGACTGAGCGAATaGAGCACTGGCTCAGCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RDWWAAFWERPWQLGIPVRGLSE*STGSAK Trigger: CTTTGCTGAGCCAGTGCTGCATTCGCTCAGTCCTCT...CACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | CTGACAAAGGAGAGAGCTGTGTGCACTGATCTGGATGGGAACGGTCCCCAGTGTGAAGTGGGGAGCTGCTaGTGGAGGTGGAGGCATCCT | + |
|
Preference number: 2 (lower is better) Translates to: LTKERAVCTDLDGNGPQCEVGSC*WRWRHP Trigger: AGGATGCCTCCACCTCCAGCAGCAGCTCCCCACTTC...ACACTGGGGACCGTTCCCATCCAGATCAGTGCACACAGCTCTCTCCTTTGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | ACAGGCTGCGGAAGCTGTCATCTGTACCAACAGAACCTTCCAGCATGGCCCAGCAAAGACTCGATGCTATaGGGGGCAGCAGCCCAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: TGCGSCHLYQQNLPAWPSKDSML*GAAAQL Trigger: CAGCTGGGCTGCTGCCCCGCATAGCATCGAGTCTTT...GCTGGGCCATGCTGGAAGGTTCTGTTGGTACAGATGACAGCTTCCGCAGCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | CACGAGGTCACCATCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGGTCACACCGCCAGGTCACAGCACTaGAGCTGCCTACCGCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: HEVTIIPCKTRLAWQGHTARSQH*SCLPLL Trigger: CAGAAGCGGTAGGCAGCTGCAGTGCTGTGACCTGGC...GGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGATGGTGACCTCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | TGCGTGGTGCTGTGGGCCAGTGTATCCTTCAATGTGAAGGTGCTTCCACACAGCACAGGGCCTCAGGAATaGGAGCTGTGGCCATGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: CVVLWASVSFNVKVLPHSTGPQE*ELWPCP Trigger: TGGACATGGCCACAGCTCTCATTCCTGAGGCCCTGT...GCTGTGTGGAAGCACCTTCACATTGAAGGATACACTGGCCCACAGCACCACGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCTCATTTATCTCCGACTAGTTAGGACCCAGCCCACAGCCCAGTTGGCACATCCCCCGGCAATGATGTaGAGGCAGGTCCTGTCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: SLIYLRLVRTQPTAQLAHPPAMM*RQVLSC Trigger: GCAGGACAGGACCTGCCTTCACATCATTGCCGGGGG...ATGTGCCAACTGGGCTGTGGGCTGGGTCCTAACTAGTCGGAGATAAATGAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | AGCCTTTTGGGAACGACCCTGGCAACTGGGCATCCCAGTGGAAGTGGGGAGCTGCTCGACTGTTCATCTTaGGACAGGATCTCACAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: SLLGTTLATGHPSGSGELLDCSS*DRISQS Trigger: GCTCTGTGAGATCCTGTCTCAAGATGAACAGTCGAG...CAGCTCCCCACTTCCACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | GGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTGGGCATCCCAGTGGAAGTGGGGCATAGGACAATCATaGACACTGGGGCTTGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: GGQPFGNDPGNWASQWKWGIGQS*TLGLEK Trigger: TTTCTCAAGCCCCAGTGTTCATGATTGTCCTATGCC...CCACTTCCACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTGTCTGCTGGCATCAAGCTGGAAGACGAAGACCACGGGAACGCACTCACAGCAGCAGTTCAGGATaGCTGGGCACTACAAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: AAVCWHQAGRRRPRERTHSSSSG*LGTTRM Trigger: CATCCTTGTAGTGCCCAGTCATCCTGAACTGCTGCT...GTGAGTGCGTTCCCGTGGTCTTCGTCTTCCAGCTTGATGCCAGCAGACAGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | CAGAGCCAGATGGTAGGACATGGAGGCCCAACACCCTCCTCTACCCCACCCTTAAGAGGACTGAGCGAATaGAGCACTGGCTCAGCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: QSQMVGHGGPTPSSTPPLRGLSE*STGSAK Trigger: CTTTGCTGAGCCAGTGCTGCATTCGCTCAGTCCTCT...TAAGGGTGGGGTAGAGGAGGGTGTTGGGCCTCCATGTCCTACCATCTGGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | CTTATCAGAGACTGGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTGGGCATCCCCTGTGAGGACTGGTaGTTTGCAAGCATGGGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LIRDWWAAFWERPWQLGIPCEDW*FASMGS Trigger: AGAGCCCATGCTTGCAAAGCACCAGTCCTCACAGGG...GATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | CTGACAAAGGAGAGAGCTGTGTGCACTGATCTGGATGGGAACGGTCCCCAGTGTTGGGGTGGGCCTGCCTaGTGCTCACTATGCTGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LTKERAVCTDLDGNGPQCWGGPA*CSLCCL Trigger: CAAACAGCATAGTGAGCAGCAGGCAGGCCCACCCCA...ACACTGGGGACCGTTCCCATCCAGATCAGTGCACACAGCTCTCTCCTTTGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | TCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTGGGCATTTGTTGGGGTGGGCCTaGCTGCTGCTCACTATGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SYQRLVGSLLGTTLATGHLLGWA*LLLTML Trigger: CAGCATAGTGAGCAGCAGGCAGGCCCACCCCAACAA...ATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | AGACAGGATCTCACAGAGCCCAAAATGTCACTGTTTAGGCTAGGCTGCCTCAGTCCGTCTGGAGCAGCCTaGCACTCACCACCCACAGGC | + |
|
Preference number: 2 (lower is better) Translates to: RQDLTEPKMSLFRLGCLSPSGAA*HSPPTG Trigger: GCCTGTGGGTGGTGAGTGGCAGGCTGCTCCAGACGG...ACTGAGGCAGCCTAGCCTAAACAGTGACATTTTGGGCTCTGTGAGATCCTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTTTGGGAACGACCCTGGCAACTGGGCATCCCAGTGGAAGTGGGGAGCTGGCAAAGCTGTATTCCTaGGCCCTCAGACTTCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: SLLGTTLATGHPSGSGELAKLYS*ALRLLS Trigger: TGAGAGAAGTCTGAGGGCCCAGGAATACAGCTTTGC...CAGCTCCCCACTTCCACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTGGGCATCCAGATGGTAGGACATaGAGGCCCAACACCCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: SYQRLVGSLLGTTLATGHPDGRT*RPNTLL Trigger: GAGGAGGGTGTTGGGCCTCCATGTCCTACCATCTGG...ATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | TCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGGTCACACCCTCAGAGCCCCAACCCAGAATGCAATCCTaGACGCGGCCAACCCCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: SFPVKQGWPGKVTPSEPQPRMQS*TRPTPC Trigger: ACAAGGGGTTGGCCGCGTCCAGGATTGCATTCTGGG...TTGGGGCTCTGAGGGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGACTGGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTGGGCATCCCAGTGGCAGTAAGCACAAACTaGTCATCAGGACTCACAGCC | + |
|
Preference number: 2 (lower is better) Translates to: RDWWAAFWERPWQLGIPVAVSTN*SSGLTA Trigger: GGCTGTGAGTCCTGATGACCAGTTTGTGCTTACTGC...CACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172284.9 |
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| 3UTR CAA 90 bp | TCTCTCATTTATCTCCGACTAGTTAGGACCCAGCCCACAGCCCAGTaGGCACATCCATGTCTCCAGGGACCGACCACACATCCCAGCATC | + |
|
Preference number: 2 (lower is better) Translates to: SLIYLRLVRTQPTAQ*AHPCLQGPTTHPSI Trigger: GATGCTGGGATGTGTGGTCGGTCCCTGGAGACATGGATGTGCCAACTGGGCTGTGGGCTGGGTCCTAACTAGTCGGAGATAAATGAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | AGCCTTTTGGGAACGACCCTGGCAACTGGGCATCCCAGTGGAAGTGGGGAGCTGGTGTATCCTTCAATGTaGAGGTGCTTCCACACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: SLLGTTLATGHPSGSGELVYPSM*RCFHTA Trigger: AGCTGTGTGGAAGCACCTTCACATTGAAGGATACAC...CAGCTCCCCACTTCCACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | CACGAGGTCACCATCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGGTCACACCAAAGCTTGCTCAGTCTaGTCAGCCCAGCCCAGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: HEVTIIPCKTRLAWQGHTKACSV*SAQPRS Trigger: ACTCCTGGGCTGGGCTGAGCAGACTGAGCAAGCTTT...GGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGATGGTGACCTCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTGGGCATAGTCTCTCAGCTCCTTaGACTGACCATCCGGCCATG | + |
|
Preference number: 2 (lower is better) Translates to: SYQRLVGSLLGTTLATGHSLSAP*TDHPAM Trigger: CATGGCCGGATGGTCAGTGCAAGGAGCTGAGAGACT...ATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | AAATTGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAACGACCCGAAGTGGGGAGCTGCTaGTGGAGGTGGAGGCATCCT | + |
|
Preference number: 2 (lower is better) Translates to: KLPWCLIRDWWAAFWERPEVGSC*WRWRHP Trigger: AGGATGCCTCCACCTCCAGCAGCAGCTCCCCACTTC...GGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCGGAAGCTGTCATCTGTACCAACAGAACCTTCCAGCATGGCCCAGCTCTCACCCAGAGTCTCAGGGTaGCATCCCCAGAGGAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LRKLSSVPTEPSSMAQLSPRVSG*HPQRKK Trigger: TTTCTTCCTCTGGGGATGGCACCCTGAGACTCTGGG...TGAGAGCTGGGCCATGCTGGAAGGTTCTGTTGGTACAGATGACAGCTTCCGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | CACGAGGTCACCATCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGGTCACACCTCACAGCACTGCAGCTaGCTACCGCTTCTGTACTCC | + |
|
Preference number: 2 (lower is better) Translates to: HEVTIIPCKTRLAWQGHTSQHCS*LPLLYS Trigger: GGAGTACAGAAGCGGTAGGCAGCTGCAGTGCTGTGA...GGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGATGGTGACCTCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | GTTCTCAGTGACAAAGGCAGACTCTGGAGATCAGGGACTGTTGAGCTAGTGGTACCCTTGTGGCCTGGCTaGTCTCCAGGCTCCTGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: VLSDKGRLWRSGTVELVVPLWPG*SPGSCR Trigger: CCTACAGGAGCCTGGAGAGCAGCCAGGCCACAAGGG...TACCACTAGCTCAACAGTCCCTGATCTCCAGAGTCTGCCTTTGTCACTGAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | ACTCACACAAGTAAGTGGACCCTGGGACATGCACAGATGTCACTGTGGCATAGGTCCCTTCCACCAGCATaGCCCCCAACCCTCTGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: THTSKWTLGHAQMSLWHRSLPPA*PPTLWN Trigger: GTTCCAGAGGGTTGGGGGCCATGCTGGTGGAAGGGA...CCTATGCCACAGTGACATCTGTGCATGTCCCAGGGTCCACTTACTTGTGTGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | CACGAGGTCACCATCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGGTCACACCCTGCTGGCATCAAGCTaGAAGACGAAGACCACGGGA | + |
|
Preference number: 2 (lower is better) Translates to: HEVTIIPCKTRLAWQGHTLLASS*KTKTTG Trigger: TCCCGTGGTCTTCGTCTTCCAGCTTGATGCCAGCAG...GGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGATGGTGACCTCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | CACGAGGTCACCATCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGGTCACACCCCAGCTGCTGTCTGCTaGCATCAAGCTGGAAGACGA | + |
|
Preference number: 2 (lower is better) Translates to: HEVTIIPCKTRLAWQGHTPAAVC*HQAGRR Trigger: TCGTCTTCCAGCTTGATGCCAGCAGACAGCAGCTGG...GGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGATGGTGACCTCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | AAATTGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAACGACCCACAGGGCCTCAGGAATaGGAGCTGTGGCCATGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: KLPWCLIRDWWAAFWERPTGPQE*ELWPCP Trigger: TGGACATGGCCACAGCTCTCATTCCTGAGGCCCTGT...GGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | CTAACTAAACTGACAAAGGAGAGAGCTGTGTGCACTGATCTGGATGGGAACGGTCCCCCGGCAATGATGTaGAGGCAGGTCCTGTCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: LTKLTKERAVCTDLDGNGPPAMM*RQVLSC Trigger: GCAGGACAGGACCTGCCTTCACATCATTGCCGGGGG...ACCGTTCCCATCCAGATCAGTGCACACAGCTCTCTCCTTTGTCAGTTTAGTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCCAGATGGTAGGACATGGAGGCCCAACACCCTCCTCTACCCCACCCTTAGGCATAGGACAATCATaGACACTGGGGCTTGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: QSQMVGHGGPTPSSTPPLGIGQS*TLGLEK Trigger: TTTCTCAAGCCCCAGTGTTCATGATTGTCCTATGCC...TAAGGGTGGGGTAGAGGAGGGTGTTGGGCCTCCATGTCCTACCATCTGGCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | AGAGACTGGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTGGGCATCCCAGTGCATCCTGACACAAGCTaGAATCATAGCATGAACTGC | + |
|
Preference number: 2 (lower is better) Translates to: RDWWAAFWERPWQLGIPVHPDTS*NHSMNC Trigger: GCAGTTCATGCTATGATTTCAGCTTGTGTCAGGATG...CACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR GCA 90 bp | AAAAGTGGAGACAGGACTGGGATTGTTGGGGTGGGCCTGCCTGCTGCTCACTATCCAACCCTCTGGAACTaGAAGGCCAGTCAATCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: KSGDRTGIVGVGLPAAHYPTLWN*KASQSL Trigger: GAGAGATTGACTGGCCTTGCAGTTCCAGAGGGTTGG...ATAGTGAGCAGCAGGCAGGCCCACCCCAACAATCCCAGTCCTGTCTCCACTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR CCA 90 bp | CTCAGTGACAAAGGCAGACTCTGGAGATCAGGGACTGTTGAGCTAGTGGTAGGGATACAGAGCTCCACCTaGAGAGCCCCCGGCAATGAT | + |
|
Preference number: 2 (lower is better) Translates to: LSDKGRLWRSGTVELVVGIQSST*RAPGND Trigger: ATCATTGCCGGGGGCTCTCCAGGTGGAGCTCTGTAT...CCCTACCACTAGCTCAACAGTCCCTGATCTCCAGAGTCTGCCTTTGTCACTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
||
| 3UTR-3UTR CCA 90 bp | CTAACTAAACTGACAAAGGAGAGAGCTGTGTGCACTGATCTGGATGGGAACGGTCAGGACTGGGATTGTTaGGGTGGGCCTGCCTGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: LTKLTKERAVCTDLDGNGQDWDC*GGPACC Trigger: GCAGCAGGCAGGCCCACCCCAACAATCCCAGTCCTG...ACCGTTCCCATCCAGATCAGTGCACACAGCTCTCTCCTTTGTCAGTTTAGTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR CCA 90 bp | AATTGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAACGACCCTCCAGATGGTAGGACATaGAGGCCCAACACCCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: NCLGVLSETGGQPFGNDPPDGRT*RPNTLL Trigger: GAGGAGGGTGTTGGGCCTCCATGTCCTACCATCTGG...AGGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR CCA 90 bp | AAATTGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAACGACCCAACTGGGCATCCCAGTaGAAGTGGGGAGCTGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: KLPWCLIRDWWAAFWERPNWASQ*KWGAAA Trigger: AGCAGCAGCTCCCCACTTCCACTGGGATGCCCAGTT...GGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | CACGAGGTCACCATCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGGTCACACCGCGAACAGCACCAACTaGATCTGCCTCAAAACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: HEVTIIPCKTRLAWQGHTANSTN*ICLKTA Trigger: TGCTGTTTTGAGGCAGATTCAGTTGGTGCTGTTCGC...GGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGATGGTGACCTCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
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| 3UTR-3UTR TCA 90 bp | CTTATCAGAGACTGGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTGGGCATCGGCATAGGACAATCATaGACACTGGGGCTTGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LIRDWWAAFWERPWQLGIGIGQS*TLGLEK Trigger: TTTCTCAAGCCCCAGTGTTCATGATTGTCCTATGCC...GATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | AAATTGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAACGACCCAGCCCAGCCCAGGAGTaGGAACAGCACCAACTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: KLPWCLIRDWWAAFWERPSPAQE*EQHQLN Trigger: ATTCAGTTGGTGCTGTTCGCACTCCTGGGCTGGGCT...GGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | ACATGCGTGGTGCTGTGGGCCAGTGTATCCTTCAATGTGAAGGTGCTTCCACACTGTCTGAACACCAGCTaGTGTCTGCTGGCATCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: TCVVLWASVSFNVKVLPHCLNTS*CLLASS Trigger: GCTTGATGCCAGCAGACAGCAGCTGGTGTTCAGACA...GTGTGGAAGCACCTTCACATTGAAGGATACACTGGCCCACAGCACCACGCATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | CGTGGTGCTGTGGGCCAGTGTATCCTTCAATGTGAAGGTGCTTCCACACAGCTCGACAAAGGCAGACTCTaGAGATCAGGGACTGTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: RGAVGQCILQCEGASTQLDKGRL*RSGTVE Trigger: CTCAACAGTCCCTGATCTCCAGAGTCTGCCTTTGTC...GAGCTGTGTGGAAGCACCTTCACATTGAAGGATACACTGGCCCACAGCACCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
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| 3UTR-3UTR CCA 90 bp | TCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGGTCACACCCTCAGAGCCCCAAGACAAAGGCAGACTCTaGAGATCAGGGACTGTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: SFPVKQGWPGKVTPSEPQDKGRL*RSGTVE Trigger: CTCAACAGTCCCTGATCTCCAGAGTCTGCCTTTGTC...TTGGGGCTCTGAGGGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAGTGGAGACAGGACTGGGATTGTTGGGGTGGGCCTGCCTGCTGCTCACTATCCATCACTGTCTGTGTaGCTGTCTCAGAGCCTACAA | + |
|
Preference number: 2 (lower is better) Translates to: KSGDRTGIVGVGLPAAHYPSLSV*LSQSLQ Trigger: TTGTAGGCTCTGAGACAGCCACACAGACAGTGATGG...ATAGTGAGCAGCAGGCAGGCCCACCCCAACAATCCCAGTCCTGTCTCCACTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCCAGATGGTAGGACATGGAGGCCCAACACCCTCCTCTACCCCACCCTTAGCACAGATGTCACTGTaGCATAGGACAATCATGAAC | + |
|
Preference number: 2 (lower is better) Translates to: QSQMVGHGGPTPSSTPPLAQMSL*HRTIMN Trigger: GTTCATGATTGTCCTATGCCACAGTGACATCTGTGC...TAAGGGTGGGGTAGAGGAGGGTGTTGGGCCTCCATGTCCTACCATCTGGCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | CTGACAAAGGAGAGAGCTGTGTGCACTGATCTGGATGGGAACGGTCCCCAGTGTCTTATCAGAGACTGGTaGGCAGCCTTTTGGGAACGA | + |
|
Preference number: 2 (lower is better) Translates to: LTKERAVCTDLDGNGPQCLIRDW*AAFWER Trigger: TCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAG...ACACTGGGGACCGTTCCCATCCAGATCAGTGCACACAGCTCTCTCCTTTGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR CCA 90 bp | TCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGGTCACACCCTCAGAGCCCCAATCATGTTGTCAAAGGTaGCCTTGTACAGGCTGCGGA | + |
|
Preference number: 2 (lower is better) Translates to: SFPVKQGWPGKVTPSEPQSCCQR*PCTGCG Trigger: TCCGCAGCCTGTACAAGGCCACCTTTGACAACATGA...TTGGGGCTCTGAGGGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | GCCAGTGTATCCTTCAATGTGAAGGTGCTTCCACACAGCTCTAGACTCTTAGCTACAGGGCCTCAGGAATaGGAGCTGTGGCCATGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: ASVSFNVKVLPHSSRLLATGPQE*ELWPCP Trigger: TGGACATGGCCACAGCTCTCATTCCTGAGGCCCTGT...AGCTAAGAGTCTAGAGCTGTGTGGAAGCACCTTCACATTGAAGGATACACTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
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| 3UTR-3UTR TCA 90 bp | TCATATAAATTGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAAGGGACTGAGCTGCCGTaGTCTCCCTCCCTAGGGATG | + |
|
Preference number: 2 (lower is better) Translates to: SYKLPWCLIRDWWAAFWEGTELP*SPSLGM Trigger: CATCCCTAGGGAGGGAGATCACGGCAGCTCAGTCCC...TTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTTATATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | CAATCTCTCTCATATAAATTGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCGAGAGCCCCCGGCAATaGTGTGAAGGCAGGTCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: QSLSYKLPWCLIRDWWAAESPRQ*CEGRSC Trigger: ACAGGACCTGCCTTCACATCATTGCCGGGGGCTCTC...GGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTTATATGAGAGAGATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | CCACACAGCTCTAGACTCTTAGCTAAGCTAACACCACCTGCCTTCCCTGCAACCCTCGACTGTTCATCTTaGGACAGGATCTCACAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: PHSSRLLAKLTPPAFPATLDCSS*DRISQS Trigger: GCTCTGTGAGATCCTGTCTCAAGATGAACAGTCGAG...GGTTGCAGGGAAGGCAGGTGGTGTTAGCTTAGCTAAGAGTCTAGAGCTGTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | CTTAGGAATAACCCCACCATGAAGGCCACCATCTCTCCTTTGACACAAGGACTCGTGGACCCTGGGACATaGACAGATGTCACTGTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LRNNPTMKATISPLTQGLVDPGT*TDVTVA Trigger: TGCCACAGTGACATCTGTGCATGTCCCAGGGTCCAC...GAGTCCTTGTGTCAAAGGAGAGATGGTGGCCTTCATGGTGGGGTTATTCCTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGACAGGACTGGGATTGTTGGGGTGGGCCTGCCTGCTGCTCACTATGCTGTTACTGATAGCTGCTTGTaGCCACAAGACTATTTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: GDRTGIVGVGLPAAHYAVTDSCL*PQDYFY Trigger: GTAGAAATAGTCTTGTGGCCACAAGCAGCTATCAGT...AACAGCATAGTGAGCAGCAGGCAGGCCCACCCCAACAATCCCAGTCCTGTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | TCTCTCATTTATCTCCGACTAGTTAGGACCCAGCCCACAGCCCAGTTGGCACATCTCGACTGTTCATCTTaGGACAGGATCTCACAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: SLIYLRLVRTQPTAQLAHLDCSS*DRISQS Trigger: GCTCTGTGAGATCCTGTCTCAAGATGAACAGTCGAG...ATGTGCCAACTGGGCTGTGGGCTGGGTCCTAACTAGTCGGAGATAAATGAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | ACTCACACAAGTAAGTGGACCCTGGGACATGCACAGATGTCACTGTGGCATAGGATGAACACTGGGGCTTaGGAAAAGTGGAGACAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: THTSKWTLGHAQMSLWHRMNTGA*EKWRQD Trigger: GTCCTGTCTCCACTTTTCTCAAGCCCCAGTGTTCAT...CCTATGCCACAGTGACATCTGTGCATGTCCCAGGGTCCACTTACTTGTGTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | ACAGGCTGCGGAAGCTGTCATCTGTACCAACAGAACCTTCCAGCATGGCCCAGCCATTTCCTTCTGTTCTaGAGTGTATGCAGAGTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: TGCGSCHLYQQNLPAWPSHFLLF*SVCRVQ Trigger: CTGAACTCTGCATACACTGCAGAACAGAAGGAAATG...GCTGGGCCATGCTGGAAGGTTCTGTTGGTACAGATGACAGCTTCCGCAGCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | AGTGACAAAGGCAGACTCTGGAGATCAGGGACTGTTGAGCTAGTGGTAGGGACTCTTCTCATCCCGGTCTaGAGTAAGCACAAACTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: SDKGRLWRSGTVELVVGTLLIPV*SKHKLV Trigger: GACCAGTTTGTGCTTACTGCAGACCGGGATGAGAAG...AGTCCCTACCACTAGCTCAACAGTCCCTGATCTCCAGAGTCTGCCTTTGTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | AAATTGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAACGACCCTGGGCACTACAAGGATaGGGCTCACAAACTCAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: KLPWCLIRDWWAAFWERPWALQG*GSQTQC Trigger: ACACTGAGTTTGTGAGCCGCATCCTTGTAGTGCCCA...GGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | AGACAGGACTGGGATTGTTGGGGTGGGCCTGCCTGCTGCTCACTATGCTGTTTGTTTGTTCTGTATGTTTaGGTGGTACCTAAACTCGGG | + |
|
Preference number: 2 (lower is better) Translates to: RQDWDCWGGPACCSLCCLFVLYV*VVPKLG Trigger: CCCGAGTTTAGGTACCACCCAAACATACAGAACAAA...CAAACAGCATAGTGAGCAGCAGGCAGGCCCACCCCAACAATCCCAGTCCTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | AAATTGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAACGACCCCAAGTAAGTGGACCCTaGGACATGCACAGATGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: KLPWCLIRDWWAAFWERPQVSGP*DMHRCH Trigger: GTGACATCTGTGCATGTCCCAGGGTCCACTTACTTG...GGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | ACTCACACAAGTAAGTGGACCCTGGGACATGCACAGATGTCACTGTGGCATAGGACTCACACAAGTAAGTaGACCCTGGGACATGCACAG | + |
|
Preference number: 2 (lower is better) Translates to: THTSKWTLGHAQMSLWHRTHTSK*TLGHAQ Trigger: CTGTGCATGTCCCAGGGTCCACTTACTTGTGTGAGT...CCTATGCCACAGTGACATCTGTGCATGTCCCAGGGTCCACTTACTTGTGTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | ACTAAACTGACAAAGGAGAGAGCTGTGTGCACTGATCTGGATGGGAACGGTCCCTCATGTTGTCAAAGGTaGCCTTGTACAGGCTGCGGA | + |
|
Preference number: 2 (lower is better) Translates to: TKLTKERAVCTDLDGNGPSCCQR*PCTGCG Trigger: TCCGCAGCCTGTACAAGGCCACCTTTGACAACATGA...GGGACCGTTCCCATCCAGATCAGTGCACACAGCTCTCTCCTTTGTCAGTTTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | CAACAGAACCACGAGGTCACCATCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGTGTATCCTTCAATGTaGAGGTGCTTCCACACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: QQNHEVTIIPCKTRLAWQVYPSM*RCFHTA Trigger: AGCTGTGTGGAAGCACCTTCACATTGAAGGATACAC...TTGCCAGGCCAGCCTTGTTTTACAGGGAATGATGGTGACCTCGTGGTTCTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
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| 3UTR-3UTR TCA 90 bp | CTAACTAAACTGACAAAGGAGAGAGCTGTGTGCACTGATCTGGATGGGAACGGTTGCTGTTTGGCTCTGTaGCTCACCAGGACCTTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LTKLTKERAVCTDLDGNGCCLAL*LTRTLG Trigger: TCCTAAGGTCCTGGTGAGTCACAGAGCCAAACAGCA...ACCGTTCCCATCCAGATCAGTGCACACAGCTCTCTCCTTTGTCAGTTTAGTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR TCA 90 bp | CTTAGGAATAACCCCACCATGAAGGCCACCATCTCTCCTTTGACACAAGGACTCATGAACACTGGGGCTTaGGAAAAGTGGAGACAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: LRNNPTMKATISPLTQGLMNTGA*EKWRQD Trigger: GTCCTGTCTCCACTTTTCTCAAGCCCCAGTGTTCAT...GAGTCCTTGTGTCAAAGGAGAGATGGTGGCCTTCATGGTGGGGTTATTCCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | TCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGGTCACACCCTCAGAGCCCCAACATTTCCTTCTGTTCTaGAGTGTATGCAGAGTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: SFPVKQGWPGKVTPSEPQHFLLF*SVCRVQ Trigger: CTGAACTCTGCATACACTGCAGAACAGAAGGAAATG...TTGGGGCTCTGAGGGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
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| 3UTR-3UTR GCA 90 bp | TCATATAAATTGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAATGGGGTGGGCCTGCCTaGTGCTCACTATGCTGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: SYKLPWCLIRDWWAAFWEWGGPA*CSLCCL Trigger: CAAACAGCATAGTGAGCAGCAGGCAGGCCCACCCCA...TTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTTATATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR GCA 90 bp | GTTCTCAGTGACAAAGGCAGACTCTGGAGATCAGGGACTGTTGAGCTAGTGGTACTTCTCATCCCGGTCTaGAGTAAGCACAAACTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: VLSDKGRLWRSGTVELVVLLIPV*SKHKLV Trigger: GACCAGTTTGTGCTTACTGCAGACCGGGATGAGAAG...TACCACTAGCTCAACAGTCCCTGATCTCCAGAGTCTGCCTTTGTCACTGAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | TCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGGTCACACCCTCAGAGCCCCAATTTGTTCTGTATGTTTaGGTGGTACCTAAACTCGGG | + |
|
Preference number: 2 (lower is better) Translates to: SFPVKQGWPGKVTPSEPQFVLYV*VVPKLG Trigger: CCCGAGTTTAGGTACCACCCAAACATACAGAACAAA...TTGGGGCTCTGAGGGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | CTGACAAAGGAGAGAGCTGTGTGCACTGATCTGGATGGGAACGGTCCCCAGTGTACTGATAGCTGCTTGTaGCCACAAGACTATTTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: LTKERAVCTDLDGNGPQCTDSCL*PQDYFY Trigger: GTAGAAATAGTCTTGTGGCCACAAGCAGCTATCAGT...ACACTGGGGACCGTTCCCATCCAGATCAGTGCACACAGCTCTCTCCTTTGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTGGGCATACTGATAGCTGCTTGTaGCCACAAGACTATTTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: SYQRLVGSLLGTTLATGHTDSCL*PQDYFY Trigger: GTAGAAATAGTCTTGTGGCCACAAGCAGCTATCAGT...ATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR CAA 90 bp | CCAACCCTCTGGAACTGCAAGGCCAGTCAATCTCTCTCATATAAATaGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: PTLWNCKASQSLSYK*PWCLIRDWWAAFWE Trigger: TTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTTATATGAGAGAGATTGACTGGCCTTGCAGTTCCAGAGGGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR GCA 90 bp | CAATCTCTCTCATATAAATTGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCAGAGGACTGAGCGAATaGAGCACTGGCTCAGCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: QSLSYKLPWCLIRDWWAARGLSE*STGSAK Trigger: CTTTGCTGAGCCAGTGCTGCATTCGCTCAGTCCTCT...GGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTTATATGAGAGAGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR CCA 90 bp | TTAAGATCAGCTATGGAGGCTGCTGCTGAACATTCCAGAAAGCTATGCAAAGTTCCCAGAATGCAATCCTaGACGCGGCCAACCCCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: LRSAMEAAAEHSRKLCKVPRMQS*TRPTPC Trigger: ACAAGGGGTTGGCCGCGTCCAGGATTGCATTCTGGG...AACTTTGCATAGCTTTCTGGAATGTTCAGCAGCAGCCTCCATAGCTGATCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR GCA 90 bp | TTAAGATCAGCTATGGAGGCTGCTGCTGAACATTCCAGAAAGCTATGCAAAGTTAGCCCAGCCCAGGAGTaGGAACAGCACCAACTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: LRSAMEAAAEHSRKLCKVSPAQE*EQHQLN Trigger: ATTCAGTTGGTGCTGTTCGCACTCCTGGGCTGGGCT...AACTTTGCATAGCTTTCTGGAATGTTCAGCAGCAGCCTCCATAGCTGATCTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR GCA 90 bp | CTTAGGAATAACCCCACCATGAAGGCCACCATCTCTCCTTTGACACAAGGACTCTTCTTCAGCTGCTGCTaGAGTCTCTCTTCCTTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LRNNPTMKATISPLTQGLFFSCC*SLSSFF Trigger: GAAAAAGGAAGAGAGACTGCAGCAGCAGCTGAAGAA...GAGTCCTTGTGTCAAAGGAGAGATGGTGGCCTTCATGGTGGGGTTATTCCTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR CCA 90 bp | CAATCTCTCTCATATAAATTGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCGACAAAGGCAGACTCTaGAGATCAGGGACTGTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: QSLSYKLPWCLIRDWWAADKGRL*RSGTVE Trigger: CTCAACAGTCCCTGATCTCCAGAGTCTGCCTTTGTC...GGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTTATATGAGAGAGATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTAGGAATAACCCCACCATGAAGGCCACCATCTCTCCTTTGACACAAGGACTCGCACAGATGTCACTGTaGCATAGGACAATCATGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LRNNPTMKATISPLTQGLAQMSL*HRTIMN Trigger: GTTCATGATTGTCCTATGCCACAGTGACATCTGTGC...GAGTCCTTGTGTCAAAGGAGAGATGGTGGCCTTCATGGTGGGGTTATTCCTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTGGGCATTATGGAAGAAATTTCTaGAACCACATGAAGTGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: SYQRLVGSLLGTTLATGHYGRNF*NHMKCR Trigger: CCTACACTTCATGTGGTTCCAGAAATTTCTTCCATA...ATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR CCA 90 bp | TTAAGATCAGCTATGGAGGCTGCTGCTGAACATTCCAGAAAGCTATGCAAAGTTCCAGCTGCTGTCTGCTaGCATCAAGCTGGAAGACGA | + |
|
Preference number: 2 (lower is better) Translates to: LRSAMEAAAEHSRKLCKVPAAVC*HQAGRR Trigger: TCGTCTTCCAGCTTGATGCCAGCAGACAGCAGCTGG...AACTTTGCATAGCTTTCTGGAATGTTCAGCAGCAGCCTCCATAGCTGATCTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR TCA 90 bp | CAAGAGCCATGTCATTTGAAGAGCATACACACATTGAATGTCTTAAGATCAGCTACAGGGCCTCAGGAATaGGAGCTGTGGCCATGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: QEPCHLKSIHTLNVLRSATGPQE*ELWPCP Trigger: TGGACATGGCCACAGCTCTCATTCCTGAGGCCCTGT...AGCTGATCTTAAGACATTCAATGTGTGTATGCTCTTCAAATGACATGGCTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR CCA 90 bp | TCATATAAATTGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAACAAGTAAGTGGACCCTaGGACATGCACAGATGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: SYKLPWCLIRDWWAAFWEQVSGP*DMHRCH Trigger: GTGACATCTGTGCATGTCCCAGGGTCCACTTACTTG...TTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTTATATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR CCA 90 bp | TCATATAAATTGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAAACTCACACAAGTAAGTaGACCCTGGGACATGCACAG | + |
|
Preference number: 2 (lower is better) Translates to: SYKLPWCLIRDWWAAFWETHTSK*TLGHAQ Trigger: CTGTGCATGTCCCAGGGTCCACTTACTTGTGTGAGT...TTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTTATATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR CAA 90 bp | CAGAGCTGGACAACACCCCTCTCTAACCACCAAGAGCCATGTCATTaGAAGAGCATACACACATTGAATGTCTTAAGATCAGCTATGGAG | + |
|
Preference number: 2 (lower is better) Translates to: QSWTTPLSNHQEPCH*KSIHTLNVLRSAME Trigger: CTCCATAGCTGATCTTAAGACATTCAATGTGTGTATGCTCTTCAAATGACATGGCTCTTGGTGGTTAGAGAGGGGTGTTGTCCAGCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR TCA 90 bp | TCATATAAATTGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAAGTGTATCCTTCAATGTaGAGGTGCTTCCACACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: SYKLPWCLIRDWWAAFWEVYPSM*RCFHTA Trigger: AGCTGTGTGGAAGCACCTTCACATTGAAGGATACAC...TTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTTATATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR CAA 90 bp | CTCTCTAACCACCAAGAGCCATGTCATTTGAAGAGCATACACACATaGAATGTCTTAAGATCAGCTATGGAGGCTGCTGCTGAACATTCC | + |
|
Preference number: 2 (lower is better) Translates to: LSNHQEPCHLKSIHT*NVLRSAMEAAAEHS Trigger: GGAATGTTCAGCAGCAGCCTCCATAGCTGATCTTAAGACATTCAATGTGTGTATGCTCTTCAAATGACATGGCTCTTGGTGGTTAGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR GCA 90 bp | CTTAGGAATAACCCCACCATGAAGGCCACCATCTCTCCTTTGACACAAGGACTCCTCTCTCATATAAATTaGCTTGGTGTCTTATCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LRNNPTMKATISPLTQGLLSHIN*LGVLSE Trigger: CTCTGATAAGACACCAAGGCAATTTATATGAGAGAG...GAGTCCTTGTGTCAAAGGAGAGATGGTGGCCTTCATGGTGGGGTTATTCCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR TCA 90 bp | CAAGAGCCATGTCATTTGAAGAGCATACACACATTGAATGTCTTAAGATCAGCTGCGAACAGCACCAACTaGATCTGCCTCAAAACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: QEPCHLKSIHTLNVLRSAANSTN*ICLKTA Trigger: TGCTGTTTTGAGGCAGATTCAGTTGGTGCTGTTCGC...AGCTGATCTTAAGACATTCAATGTGTGTATGCTCTTCAAATGACATGGCTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR CCA 90 bp | CAAGAGCCATGTCATTTGAAGAGCATACACACATTGAATGTCTTAAGATCAGCTGACAAAGGCAGACTCTaGAGATCAGGGACTGTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: QEPCHLKSIHTLNVLRSADKGRL*RSGTVE Trigger: CTCAACAGTCCCTGATCTCCAGAGTCTGCCTTTGTC...AGCTGATCTTAAGACATTCAATGTGTGTATGCTCTTCAAATGACATGGCTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR CCA 72 bp | GAGATGGCTGCAGAGTCTCGGGGACACAGCACCGTCTaGAGCAGCCTGCCACTCACCACCCACAGGCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: EMAAESRGHSTV*SSLPLTTHRPP Trigger: TGGAGGCCTGTGGGTGGTGAGTGGCAGGCTGCTCCAGACGGTGCTGTGTCCCCGAGACTCTGCAGCCATCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
||
| 3UTR CCA 72 bp | GCCAGTGTGTCCGGCCTGCCTCCTGCTTGTGGAAGATaGGAGCTCTCAACTGGGGCTCCAGCCTCCCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: ASVSGLPPACGR*ELSTGAPASLP Trigger: TGGAAGGGAGGCTGGAGCCCCAGTTGAGAGCTCCCATCTTCCACAAGCAGGAGGCAGGCCGGACACACTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR GCA 72 bp | GCTCCCCAGGGACGACACTGTGGGCCCCGACAGACATaGGTGGTGCTGTGGGCCAGTGTATCCTTCAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: APQGRHCGPRQT*VVLWASVSFNV Trigger: CACATTGAAGGATACACTGGCCCACAGCACCACGCATGTCTGTCGGGGCCCACAGTGTCGTCCCTGGGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
||
| 3UTR GCA 72 bp | AACCTTCCAGCATGGCCCAGCTCTCACGGAGATGGCTaGAGAGTCTCGGGGACACAGCACCGTCTGGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: NLPAWPSSHGDG*RVSGTQHRLEQ Trigger: CTGCTCCAGACGGTGCTGTGTCCCCGAGACTCTGCAGCCATCTCCGTGAGAGCTGGGCCATGCTGGAAGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
||
| 3UTR CCA 72 bp | ACTGGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTaGGCATCCCAGTGGAAGTGGGGAGCTGCTGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: TGGQPFGNDPGN*ASQWKWGAAAG Trigger: TCCAGCAGCAGCTCCCCACTTCCACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR CCA 72 bp | GCACCACATAGCTCTCCTGTCCCCAGAATGCAATCCTaGACGCGGCCAACCCCTTGTGGCCTGGCTGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: APHSSPVPRMQS*TRPTPCGLAAL Trigger: GAGAGCAGCCAGGCCACAAGGGGTTGGCCGCGTCCAGGATTGCATTCTGGGGACAGGAGAGCTATGTGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR CAA 90 bp | CCCCATCACTGTCTGTGTGGCTGTCTCAGAGCCTACAAGGCAGACACCAGGGACACAGGACTGGGATTGTaGGGGTGGGCCTGCCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PHHCLCGCLRAYKADTRDTGLGL*GWACLL Trigger: CAGCAGGCAGGCCCACCCCAACAATCCCAGTCCTGT...GTCCCTGGTGTCTGCCTTGTAGGCTCTGAGACAGCCACACAGACAGTGATGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR TCA 72 bp | AGCCATACAGAGCTCCACCTGGAGAGCCCCCGGCAATaGTGTGAAGGCAGGTCCTGTCCTGCAGGTCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: SHTELHLESPRQ*CEGRSCPAGLP Trigger: AGGGAGACCTGCAGGACAGGACCTGCCTTCACATCATTGCCGGGGGCTCTCCAGGTGGAGCTCTGTATGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
||
| 3UTR TCA 72 bp | CCCCGGGCCTCCTCAAACACAACATCCCACACTCGGTaGGGGAAAGTCAGCCGCTGTCTGAACACCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PRASSNTTSHTR*GKVSRCLNTSC Trigger: GCAGCTGGTGTTCAGACAGCGGCTGACTTTCCCTCACCGAGTGTGGGATGTTGTGTTTGAGGAGGCCCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
||
| 3UTR GCA 72 bp | AGGTCACACCCTCAGAGCCCCAAAGCTTGCTCAGTCTaGTCAGCCCAGCCCAGGAGTGCGAACAGCACCAAC | + |
|
Preference number: 3 (lower is better) Translates to: RSHPQSPKACSV*SAQPRSANSTN Trigger: GTTGGTGCTGTTCGCACTCCTGGGCTGGGCTGAGCAGACTGAGCAAGCTTTGGGGCTCTGAGGGTGTGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
||
| 3UTR CCA 72 bp | ATCAGAGACTGGTGGGCAGCCTTTTGGGAACGACCCTaGCAACTGGGCATCCCAGTGGAAGTGGGGAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: IRDWWAAFWERP*QLGIPVEVGSC Trigger: GCAGCTCCCCACTTCCACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR CCA 72 bp | TGTCATTGCCAGTGTGTCCGGCCTGCCTCCTGCTTGTaGAAGATGGGAGCTCTCAACTGGGGCTCCAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: CHCQCVRPASCL*KMGALNWGSSL Trigger: GAGGCTGGAGCCCCAGTTGAGAGCTCCCATCTTCCACAAGCAGGAGGCAGGCCGGACACACTGGCAATGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR CCA 72 bp | TGTGGCCATGTCCAAGGTCAGCAACTAAGGGCTGACTaGCCCGGGCACGCCTTTTTGGTCTGTTCCGGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: CGHVQGQQLRAD*PGHAFLVCSGD Trigger: GTCCCCGGAACAGACCAAAAAGGCGTGCCCGGGCCAGTCAGCCCTTAGTTGCTGACCTTGGACATGGCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTGGGCATCCCAGTGGAAGTGGGCCACCATCTCTCCTTaGACACAAGGACTCCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: GGQPFGNDPGNWASQWKWATISP*TQGLPI Trigger: GATGGGGAGTCCTTGTGTCAAAGGAGAGATGGTGGC...CCACTTCCACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR CAA 90 bp | ACATGCGTGGTGCTGTGGGCCAGTGTATCCTTCAATGTGAAGGTGCTTCCACACGACGCGGCCAACCCCTaGTGGCCTGGCTGCTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: TCVVLWASVSFNVKVLPHDAANP*WPGCSP Trigger: TGGAGAGCAGCCAGGCCACAAGGGGTTGGCCGCGTC...GTGTGGAAGCACCTTCACATTGAAGGATACACTGGCCCACAGCACCACGCATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
||
| 3UTR TCA 72 bp | GGGACTGTTGAGCTAGTGGTAGGGACTGAGCTGCCGTaGTCTCCCTCCCTAGGGATGAACCAGGGAGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GTVELVVGTELP*SPSLGMNQGGG Trigger: TCCTCCTCCCTGGTTCATCCCTAGGGAGGGAGATCACGGCAGCTCAGTCCCTACCACTAGCTCAACAGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
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| 3UTR TCA 72 bp | CGAGTCTCTCAGCTCCTTGCACTGACCATCCGGCCATaGCGGCCCTGTGAGGACTGGTGCTTTGCAAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: RVSQLLALTIRP*RPCEDWCFASM Trigger: CATGCTTGCAAAGCACCAGTCCTCACAGGGCCGTCATGGCCGGATGGTCAGTGCAAGGAGCTGAGAGACTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CAA 90 bp | AGCCTTTTGGGAACGACCCTGGCAACTGGGCATCCCAGTGGAAGTGGGGAGCTGGTGAGGACTGGTGCTTaGCAAGCATGGGCTCTACCT | + |
|
Preference number: 3 (lower is better) Translates to: SLLGTTLATGHPSGSGELVRTGA*QAWALP Trigger: AGGTAGAGCCCATGCTTGCAAAGCACCAGTCCTCAC...CAGCTCCCCACTTCCACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR-3UTR CAA 90 bp | AGCCTTTTGGGAACGACCCTGGCAACTGGGCATCCCAGTGGAAGTGGGGAGCTGGCCACCATCTCTCCTTaGACACAAGGACTCCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: SLLGTTLATGHPSGSGELATISP*TQGLPI Trigger: GATGGGGAGTCCTTGTGTCAAAGGAGAGATGGTGGC...CAGCTCCCCACTTCCACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGTGGAGACAGGACTGGGATTGTTGGGGTGGGCCTGCCTGCTGCTCACTATACAGGACTGGGATTGTaGGGGTGGGCCTGCCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KSGDRTGIVGVGLPAAHYTGLGL*GWACLL Trigger: CAGCAGGCAGGCCCACCCCAACAATCCCAGTCCTGT...ATAGTGAGCAGCAGGCAGGCCCACCCCAACAATCCCAGTCCTGTCTCCACTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR CCA 72 bp | CGACACTGTGGGCCCCGACAGACATGCGTGGTGCTGTaGGCCAGTGTATCCTTCAATGTGAAGGTGCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: RHCGPRQTCVVL*ASVSFNVKVLP Trigger: TGGAAGCACCTTCACATTGAAGGATACACTGGCCCACAGCACCACGCATGTCTGTCGGGGCCCACAGTGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
||
| 3UTR TCA 72 bp | TGCTCAGCCCAGCCCAGGAGTGCGAACAGCACCAACTaGATCTGCCTCAAAACAGCAAGCAGCTACAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: CSAQPRSANSTN*ICLKTASSYRA Trigger: GGCTCTGTAGCTGCTTGCTGTTTTGAGGCAGATTCAGTTGGTGCTGTTCGCACTCCTGGGCTGGGCTGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
||
| 3UTR CCA 72 bp | CCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCTTTTaGGAACGACCCTGGCAACTGGGCATCCCAGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PWCLIRDWWAAF*ERPWQLGIPVE Trigger: TTCCACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGACACCAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR GCA 72 bp | AAAGTGGAGACAGGACTGGGATTGTTGGGGTGGGCCTaGCTGCTGCTCACTATGCTGTTTGGCTCTGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: KVETGLGLLGWA*LLLTMLFGSVT Trigger: AGTCACAGAGCCAAACAGCATAGTGAGCAGCAGGCAGGCCCACCCCAACAATCCCAGTCCTGTCTCCACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR CCA 72 bp | GAGGTCACCATCATTCCCTGTAAAACAAGGCTGGCCTaGCAAGGTCACACCCTCAGAGCCCCAAAGCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: EVTIIPCKTRLA*QGHTLRAPKLA Trigger: AGCAAGCTTTGGGGCTCTGAGGGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGATGGTGACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTGGGCATCCCAGTGGAAGTGGCAAGAGCCATGTCATTaGAAGAGCATACACACATTG | + |
|
Preference number: 3 (lower is better) Translates to: GGQPFGNDPGNWASQWKWQEPCH*KSIHTL Trigger: CAATGTGTGTATGCTCTTCAAATGACATGGCTCTTG...CCACTTCCACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR CCA 72 bp | TTGAGAAAAGTGGAGACAGGACTGGGATTGTTGGGGTaGGCCTGCCTGCTGCTCACTATGCTGTTTGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LRKVETGLGLLG*ACLLLTMLFGS Trigger: AGAGCCAAACAGCATAGTGAGCAGCAGGCAGGCCCACCCCAACAATCCCAGTCCTGTCTCCACTTTTCTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGACAAAGGAGAGAGCTGTGTGCACTGATCTGGATGGGAACGGTCCCCAGTGTGGCTATGGCCTTCCTTaGTTCTGTATGTTTGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LTKERAVCTDLDGNGPQCGYGLP*FCMFGW Trigger: CCACCCAAACATACAGAACAAAGGAAGGCCATAGCC...ACACTGGGGACCGTTCCCATCCAGATCAGTGCACACAGCTCTCTCCTTTGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR GCA 72 bp | TCCCTTCCACCAGCATGGCCCCCAACCCTCTGGAACTaGAAGGCCAGTCAATCTCTCTCATATAAATTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SLPPAWPPTLWN*KASQSLSYKLP Trigger: AGGCAATTTATATGAGAGAGATTGACTGGCCTTGCAGTTCCAGAGGGTTGGGGGCCATGCTGGTGGAAGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR GCA 72 bp | AAAGCAGCAGTTCAGGATGACTGGGCACTACAAGGATaGGGCTCACAAACTCAGTGTGTCCCAGGCAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: KAAVQDDWALQG*GSQTQCVPGRK Trigger: CTTTCTGCCTGGGACACACTGAGTTTGTGAGCCGCATCCTTGTAGTGCCCAGTCATCCTGAACTGCTGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170176.9 ENSMUST00000172284.9 |
||
| 3UTR GCA 72 bp | GCCAAACTAACTAAACTGACAAAGGAGAGAGCTGTGTaGACTGATCTGGATGGGAACGGTCCCCAGTGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: AKLTKLTKERAV*TDLDGNGPQCW Trigger: CCAACACTGGGGACCGTTCCCATCCAGATCAGTGCACACAGCTCTCTCCTTTGTCAGTTTAGTTAGTTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR CCA 72 bp | CTTAGTGCTTCCACTGGCTACACTCACACAAGTAAGTaGACCCTGGGACATGCACAGATGTCACTGTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LSASTGYTHTSK*TLGHAQMSLWH Trigger: ATGCCACAGTGACATCTGTGCATGTCCCAGGGTCCACTTACTTGTGTGAGTGTAGCCAGTGGAAGCACTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR CCA 72 bp | GTGTGCACTGATCTGGATGGGAACGGTCCCCAGTGTTaGAGATGTTTAGAAGGATTAGGACTTAGGGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: VCTDLDGNGPQC*RCLEGLGLRAL Trigger: CAAGGCCCTAAGTCCTAATCCTTCTAAACATCTCCAACACTGGGGACCGTTCCCATCCAGATCAGTGCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR GCA 72 bp | GGAACTGCAAGGCCAGTCAATCTCTCTCATATAAATTaGCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: GTARPVNLSHIN*LGVLSETGGQP Trigger: AGGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTTATATGAGAGAGATTGACTGGCCTTGCAGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR CAA 90 bp | ACATGCGTGGTGCTGTGGGCCAGTGTATCCTTCAATGTGAAGGTGCTTCCACACAAGAGCATACACACATaGAATGTCTTAAGATCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TCVVLWASVSFNVKVLPHKSIHT*NVLRSA Trigger: AGCTGATCTTAAGACATTCAATGTGTGTATGCTCTT...GTGTGGAAGCACCTTCACATTGAAGGATACACTGGCCCACAGCACCACGCATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR CAA 90 bp | CAATCTCTCTCATATAAATTGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCGAACGGTCCCCAGTGTaGGAGATGTTTAGAAGGATT | + |
|
Preference number: 3 (lower is better) Translates to: QSLSYKLPWCLIRDWWAAERSPV*EMFRRI Trigger: AATCCTTCTAAACATCTCCAACACTGGGGACCGTTC...GGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTTATATGAGAGAGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR CCA 72 bp | TGCAAGGCCAGTCAATCTCTCTCATATAAATTGCCTTaGTGTCTTATCAGAGACTGGTGGGCAGCCTTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: CKASQSLSYKLP*CLIRDWWAAFW Trigger: CCAAAAGGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTTATATGAGAGAGATTGACTGGCCTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR GCA 72 bp | GTGATTTCTGTTCATTTCCTTCTGTTCTGCAGTGTATaGAGAGTTCAGAGCAACAGAACCACGAGGTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: VISVHFLLFCSV*RVQSNRTTRSP Trigger: TGGTGACCTCGTGGTTCTGTTGCTCTGAACTCTGCATACACTGCAGAACAGAAGGAAATGAACAGAAATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
||
| 3UTR-3UTR CAA 90 bp | CAATCTCTCTCATATAAATTGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCAAGAGCATACACACATaGAATGTCTTAAGATCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QSLSYKLPWCLIRDWWAAKSIHT*NVLRSA Trigger: AGCTGATCTTAAGACATTCAATGTGTGTATGCTCTT...GGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTTATATGAGAGAGATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGATCAGCTATGGAGGCTGCTGCTGAACATTCCAGAAAGCTATGCAAAGTTCAAGAGCCATGTCATTaGAAGAGCATACACACATTG | + |
|
Preference number: 3 (lower is better) Translates to: LRSAMEAAAEHSRKLCKVQEPCH*KSIHTL Trigger: CAATGTGTGTATGCTCTTCAAATGACATGGCTCTTG...AACTTTGCATAGCTTTCTGGAATGTTCAGCAGCAGCCTCCATAGCTGATCTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| CDS-3UTR GCA 90 bp | TGTGAAGGCAGGTCCTGTCCTGCAGGTCTCCCTAGAGCTCCCCAGGGACGACACCGTCTGGGCGCACAGTaGCAGCCCCGCAGAGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: CEGRSCPAGLPRAPQGRHRLGAQ*QPRRAR Trigger: GCGAGCTCTGCGGGGCTGGCACTGTGCGCCCAGACG...GTGTCGTCCCTGGGGAGCTCTAGGGAGACCTGCAGGACAGGACCTGCCTTCACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
||
| CDS-3UTR GCA 90 bp | TGTGAAGGCAGGTCCTGTCCTGCAGGTCTCCCTAGAGCTCCCCAGGGACGACACGTCACTCCCTGTGTCTaGGGGCTGTCCGTCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: CEGRSCPAGLPRAPQGRHVTPCV*GLSVLP Trigger: GGGGAGGACGGACAGCCCGCAGACACAGGGAGTGAC...GTGTCGTCCCTGGGGAGCTCTAGGGAGACCTGCAGGACAGGACCTGCCTTCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
||
| 3UTR CAA 72 bp | CCATCCGGCCATGACGGCCCTGTGAGGACTGGTGCTTaGCAAGCATGGGCTCTACCTGGCTCGCAGGCTACG | + |
|
Preference number: 4 (lower is better) Translates to: PSGHDGPVRTGA*QAWALPGSQAT Trigger: CGTAGCCTGCGAGCCAGGTAGAGCCCATGCTTGCAAAGCACCAGTCCTCACAGGGCCGTCATGGCCGGATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| CDS-3UTR GCA 90 bp | CGTGGTGCTGTGGGCCAGTGTATCCTTCAATGTGAAGGTGCTTCCACACAGCTCCGTCTGGGCGCACAGTaGCAGCCCCGCAGAGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: RGAVGQCILQCEGASTQLRLGAQ*QPRRAR Trigger: GCGAGCTCTGCGGGGCTGGCACTGTGCGCCCAGACG...GAGCTGTGTGGAAGCACCTTCACATTGAAGGATACACTGGCCCACAGCACCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
||
| CDS-3UTR CCA 90 bp | CACGAGGTCACCATCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGGTCACACCCGCACCACCAGCGTCTaGGCGCACAGTGCCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HEVTIIPCKTRLAWQGHTRTTSV*AHSASP Trigger: GGGGCTGGCACTGTGCGCCCAGACGCTGGTGGTGCG...GGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGATGGTGACCTCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGTGGAGACAGGACTGGGATTGTTGGGGTGGGCCTGCCTGCTGCTCACTATCGCACCACCAGCGTCTaGGCGCACAGTGCCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KSGDRTGIVGVGLPAAHYRTTSV*AHSASP Trigger: GGGGCTGGCACTGTGCGCCCAGACGCTGGTGGTGCG...ATAGTGAGCAGCAGGCAGGCCCACCCCAACAATCCCAGTCCTGTCTCCACTTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| CDS-3UTR GCA 90 bp | GGAGACAGGACTGGGATTGTTGGGGTGGGCCTGCCTGCTGCTCACTATGCTGTTCCCTTGTGGCCTGGCTaGTCTCCAGGCTCCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GDRTGIVGVGLPAAHYAVPLWPG*SPGSCR Trigger: CCTACAGGAGCCTGGAGAGCAGCCAGGCCACAAGGG...AACAGCATAGTGAGCAGCAGGCAGGCCCACCCCAACAATCCCAGTCCTGTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171171.9 |
||
| CDS-3UTR TCA 90 bp | ACCATCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGGTCACACCCTCAGAGCCGGTCCTCTGAGGCTGTaGAGGTCAGGGCGGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TIIPCKTRLAWQGHTLRAGPLRL*RSGRCT Trigger: GGTGCACCGCCCTGACCTTCACAGCCTCAGAGGACC...GGCTCTGAGGGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGATGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
||
| CDS-3UTR TCA 90 bp | TCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGGTCACACCCTCAGAGCCCCAAGGTCCTCTGAGGCTGTaGAGGTCAGGGCGGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SFPVKQGWPGKVTPSEPQGPLRL*RSGRCT Trigger: GGTGCACCGCCCTGACCTTCACAGCCTCAGAGGACC...TTGGGGCTCTGAGGGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAGAGAGCTGCCCACAGGGCCTCAGGAATGAGAGCTGTGGCCATGTCCAAGAAGTCAGCCGCTGTCTaGACACCAGCTGCTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RERAAHRASGMRAVAMSKKSAAV*TPAAVC Trigger: GCAGACAGCAGCTGGTGTTCAGACAGCGGCTGACTT...CTTGGACATGGCCACAGCTCTCATTCCTGAGGCCCTGTGGGCAGCTCTCTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
||
| CDS-3UTR GCA 90 bp | CTGACAAAGGAGAGAGCTGTGTGCACTGATCTGGATGGGAACGGTCCCCAGTGTCCGTCTGGAGCAGCCTaGCACTCACCACCCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTKERAVCTDLDGNGPQCPSGAA*HSPPTG Trigger: GCCTGTGGGTGGTGAGTGGCAGGCTGCTCCAGACGG...ACACTGGGGACCGTTCCCATCCAGATCAGTGCACACAGCTCTCTCCTTTGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171171.9 |
||
| CDS-3UTR CCA 90 bp | GCCTGGCAAGGTCACACCCTCAGAGCCCCAAAGCTTGCTCAGTCTGCTCAGCCCCTGCTGGCATCAAGCTaGAAGACGAAGACCACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AWQGHTLRAPKLAQSAQPLLASS*KTKTTG Trigger: TCCCGTGGTCTTCGTCTTCCAGCTTGATGCCAGCAG...GGGCTGAGCAGACTGAGCAAGCTTTGGGGCTCTGAGGGTGTGACCTTGCCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
||
| CDS-3UTR GCA 90 bp | CTAACTAAACTGACAAAGGAGAGAGCTGTGTGCACTGATCTGGATGGGAACGGTGCCGCGCGAACGGCGTaGCGTCCAGGAGCATGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: LTKLTKERAVCTDLDGNGAARTA*RPGACA Trigger: CGCGCATGCTCCTGGACGGCACGCCGTTCGCGCGGC...ACCGTTCCCATCCAGATCAGTGCACACAGCTCTCTCCTTTGTCAGTTTAGTTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171171.9 |
||
| CDS-3UTR GCA 90 bp | AGCTCTAGACTCTTAGCTAAGCTAACACCACCTGCCTTCCCTGCAACCCGGCAGCCCTTGTGGCCTGGCTaGTCTCCAGGCTCCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSRLLAKLTPPAFPATRQPLWPG*SPGSCR Trigger: CCTACAGGAGCCTGGAGAGCAGCCAGGCCACAAGGG...CTGCCGGGTTGCAGGGAAGGCAGGTGGTGTTAGCTTAGCTAAGAGTCTAGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
||
| CDS-3UTR CCA 90 bp | CTTAGGAATAACCCCACCATGAAGGCCACCATCTCTCCTTTGACACAAGGACTCCGCACCACCAGCGTCTaGGCGCACAGTGCCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRNNPTMKATISPLTQGLRTTSV*AHSASP Trigger: GGGGCTGGCACTGTGCGCCCAGACGCTGGTGGTGCG...GAGTCCTTGTGTCAAAGGAGAGATGGTGGCCTTCATGGTGGGGTTATTCCTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| CDS-3UTR CCA 90 bp | TCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAACGACCCTGGCAACTGGGCATCAACCCCTTGTGGCCTaGCTGCTCTCCAGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SYQRLVGSLLGTTLATGHQPLVA*LLSRLL Trigger: CAGGAGCCTGGAGAGCAGCCAGGCCACAAGGGGTTG...ATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171171.9 |
||
| CDS-3UTR CCA 90 bp | ACGAGGTCACCATCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGGTCACACCCCAACCCCTTGTGGCCTaGCTGCTCTCCAGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TRSPSFPVKQGWPGKVTPQPLVA*LLSRLL Trigger: CAGGAGCCTGGAGAGCAGCCAGGCCACAAGGGGTTG...GGGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGATGGTGACCTCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
||
| CDS-3UTR CCA 90 bp | CCACACAGCTCTAGACTCTTAGCTAAGCTAACACCACCTGCCTTCCCTGCAACCCTGTTCCGGGGACCCTaGGAAGGGGCTCCTTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PHSSRLLAKLTPPAFPATLFRGP*EGAPLP Trigger: CGGCAAAGGAGCCCCTTCCCAGGGTCCCCGGAACAG...GGTTGCAGGGAAGGCAGGTGGTGTTAGCTTAGCTAAGAGTCTAGAGCTGTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
||
| CDS-3UTR GCA 90 bp | GCCTGGCAAGGTCACACCCTCAGAGCCCCAAAGCTTGCTCAGTCTGCTCAGCCCTGGGCACTACAAGGATaGGGCTCACAAACTCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AWQGHTLRAPKLAQSAQPWALQG*GSQTQC Trigger: ACACTGAGTTTGTGAGCCGCATCCTTGTAGTGCCCA...GGGCTGAGCAGACTGAGCAAGCTTTGGGGCTCTGAGGGTGTGACCTTGCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
||
| CDS-3UTR GCA 90 bp | CCCCATCACTGTCTGTGTGGCTGTCTCAGAGCCTACAAGGCAGACACCAGGGACCCCAGAGTCTCAGGGTaGCATCCCCAGAGGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PHHCLCGCLRAYKADTRDPRVSG*HPQRKK Trigger: TTTCTTCCTCTGGGGATGGCACCCTGAGACTCTGGG...GTCCCTGGTGTCTGCCTTGTAGGCTCTGAGACAGCCACACAGACAGTGATGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171171.9 |
||
| CDS-3UTR GCA 90 bp | AGTGACAAAGGCAGACTCTGGAGATCAGGGACTGTTGAGCTAGTGGTAGGGACTCCGTCTGGAGCAGCCTaGCACTCACCACCCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SDKGRLWRSGTVELVVGTPSGAA*HSPPTG Trigger: GCCTGTGGGTGGTGAGTGGCAGGCTGCTCCAGACGG...AGTCCCTACCACTAGCTCAACAGTCCCTGATCTCCAGAGTCTGCCTTTGTCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
||
| CDS-3UTR CCA 90 bp | TGTGAAGGCAGGTCCTGTCCTGCAGGTCTCCCTAGAGCTCCCCAGGGACGACACTCATGTTGTCAAAGGTaGCCTTGTACAGGCTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: CEGRSCPAGLPRAPQGRHSCCQR*PCTGCG Trigger: TCCGCAGCCTGTACAAGGCCACCTTTGACAACATGA...GTGTCGTCCCTGGGGAGCTCTAGGGAGACCTGCAGGACAGGACCTGCCTTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
||
| CDS-3UTR CCA 90 bp | AGTGACAAAGGCAGACTCTGGAGATCAGGGACTGTTGAGCTAGTGGTAGGGACTCTGTTCCGGGGACCCTaGGAAGGGGCTCCTTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SDKGRLWRSGTVELVVGTLFRGP*EGAPLP Trigger: CGGCAAAGGAGCCCCTTCCCAGGGTCCCCGGAACAG...AGTCCCTACCACTAGCTCAACAGTCCCTGATCTCCAGAGTCTGCCTTTGTCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
||
| 3UTR CAA 72 bp | GCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCTTTaGGGAACGACCCTGGCAACTGGGCATCCCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALVSYQRLVGSL*GTTLATGHPSG Trigger: TCCACTGGGATGCCCAGTTGCCAGGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGACACCAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| CDS-3UTR TCA 90 bp | ACCATCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGGTCACACCCTCAGAGCCTCAGGGCGGTGCACCTaGCACTCAGACATTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: TIIPCKTRLAWQGHTLRASGRCT*HSDIAM Trigger: CATGGCAATGTCTGAGTGTCAGGTGCACCGCCCTGA...GGCTCTGAGGGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236665.2 |
||
| CDS-3UTR GCA 90 bp | GATCAGCTATGGAGGCTGCTGCTGAACATTCCAGAAAGCTATGCAAAGTTTGTCCGTCTGGGCGCACAGTaGCAGCCCCGCAGAGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: DQLWRLLLNIPESYAKFVRLGAQ*QPRRAR Trigger: GCGAGCTCTGCGGGGCTGGCACTGTGCGCCCAGACG...GACAAACTTTGCATAGCTTTCTGGAATGTTCAGCAGCAGCCTCCATAGCTGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| CDS-3UTR GCA 90 bp | ACATGCGTGGTGCTGTGGGCCAGTGTATCCTTCAATGTGAAGGTGCTTCCACACGCCAGGTCACAGCACTaGAGCTGCCTACCGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TCVVLWASVSFNVKVLPHARSQH*SCLPLL Trigger: CAGAAGCGGTAGGCAGCTGCAGTGCTGTGACCTGGC...GTGTGGAAGCACCTTCACATTGAAGGATACACTGGCCCACAGCACCACGCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
||
| CDS-3UTR CCA 90 bp | GGAGACAGGACTGGGATTGTTGGGGTGGGCCTGCCTGCTGCTCACTATGCTGTTCAGACTTGGAGAAGGTaGACGCCAGAATCGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GDRTGIVGVGLPAAHYAVQTWRR*TPESSH Trigger: GTGACTCGATTCTGGCGTCCACCTTCTCCAAGTCTG...AACAGCATAGTGAGCAGCAGGCAGGCCCACCCCAACAATCCCAGTCCTGTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| CDS-3UTR CCA 90 bp | ACCATCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGGTCACACCCTCAGAGCCCCCAGAATGCAATCCTaGACGCGGCCAACCCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TIIPCKTRLAWQGHTLRAPRMQS*TRPTPC Trigger: ACAAGGGGTTGGCCGCGTCCAGGATTGCATTCTGGG...GGCTCTGAGGGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGATGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCTAGACTCTTAGCTAAGCTAACACCACCTGCCTTCCCTGCAACCCGGCAGCCCAGAATGCAATCCTaGACGCGGCCAACCCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSRLLAKLTPPAFPATRQPRMQS*TRPTPC Trigger: ACAAGGGGTTGGCCGCGTCCAGGATTGCATTCTGGG...CTGCCGGGTTGCAGGGAAGGCAGGTGGTGTTAGCTTAGCTAAGAGTCTAGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTGCTTGTGGAAGATGGGAGCTCTCAACTGGGGCTCCAGCCTCCCTTCCACTCATGTTGTCAAAGGTaGCCTTGTACAGGCTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLVEDGSSQLGLQPPFHSCCQR*PCTGCG Trigger: TCCGCAGCCTGTACAAGGCCACCTTTGACAACATGA...GTGGAAGGGAGGCTGGAGCCCCAGTTGAGAGCTCCCATCTTCCACAAGCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171171.9 |
||
| CDS-3UTR GCA 90 bp | TCATATAAATTGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAACGTCTGGGCGCACAGTaGCAGCCCCGCAGAGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SYKLPWCLIRDWWAAFWERLGAQ*QPRRAR Trigger: GCGAGCTCTGCGGGGCTGGCACTGTGCGCCCAGACG...TTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTTATATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
||
| CDS-3UTR GCA 90 bp | TGCGTGGTGCTGTGGGCCAGTGTATCCTTCAATGTGAAGGTGCTTCCACACAGCTCACAGCACTGCAGCTaGCTACCGCTTCTGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: CVVLWASVSFNVKVLPHSSQHCS*LPLLYS Trigger: GGAGTACAGAAGCGGTAGGCAGCTGCAGTGCTGTGA...GCTGTGTGGAAGCACCTTCACATTGAAGGATACACTGGCCCACAGCACCACGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
||
| CDS-3UTR GCA 90 bp | CAACAGAACCACGAGGTCACCATCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGCCAGGTCACAGCACTaGAGCTGCCTACCGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QQNHEVTIIPCKTRLAWQARSQH*SCLPLL Trigger: CAGAAGCGGTAGGCAGCTGCAGTGCTGTGACCTGGC...TTGCCAGGCCAGCCTTGTTTTACAGGGAATGATGGTGACCTCGTGGTTCTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
||
| CDS-3UTR CCA 90 bp | TTCAATGTGAAGGTGCTTCCACACAGCTCTAGACTCTTAGCTAAGCTAACACCACGCACCACCAGCGTCTaGGCGCACAGTGCCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FNVKVLPHSSRLLAKLTPRTTSV*AHSASP Trigger: GGGGCTGGCACTGTGCGCCCAGACGCTGGTGGTGCG...TGGTGTTAGCTTAGCTAAGAGTCTAGAGCTGTGTGGAAGCACCTTCACATTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
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| CDS-3UTR CCA 90 bp | TGCGTGGTGCTGTGGGCCAGTGTATCCTTCAATGTGAAGGTGCTTCCACACAGCCCAGCTGCTGTCTGCTaGCATCAAGCTGGAAGACGA | + |
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Preference number: 4 (lower is better) Translates to: CVVLWASVSFNVKVLPHSPAAVC*HQAGRR Trigger: TCGTCTTCCAGCTTGATGCCAGCAGACAGCAGCTGG...GCTGTGTGGAAGCACCTTCACATTGAAGGATACACTGGCCCACAGCACCACGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
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| CDS-3UTR TCA 90 bp | GTTCTCAGTGACAAAGGCAGACTCTGGAGATCAGGGACTGTTGAGCTAGTGGTACAAGACTCGGTCCTCTaGGGCTGTGAAGGTCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: VLSDKGRLWRSGTVELVVQDSVL*GCEGQG Trigger: GCCCTGACCTTCACAGCCTCAGAGGACCGAGTCTTG...TACCACTAGCTCAACAGTCCCTGATCTCCAGAGTCTGCCTTTGTCACTGAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
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| CDS-3UTR TCA 90 bp | TGTAAAACAAGGCTGGCCTGGCAAGGTCACACCCTCAGAGCCCCAAAGCTTGCTAGCAGCAGTTCAGGATaGCTGGGCACTACAAGGATG | + |
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Preference number: 4 (lower is better) Translates to: CKTRLAWQGHTLRAPKLASSSSG*LGTTRM Trigger: CATCCTTGTAGTGCCCAGTCATCCTGAACTGCTGCT...AGCAAGCTTTGGGGCTCTGAGGGTGTGACCTTGCCAGGCCAGCCTTGTTTTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
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| CDS-3UTR GCA 90 bp | AATTGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAACGACCCTAAAGACTCGATGCTATaGGGGGCAGCAGCCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: NCLGVLSETGGQPFGNDPKDSML*GAAAQL Trigger: CAGCTGGGCTGCTGCCCCGCATAGCATCGAGTCTTT...AGGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171171.9 |
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| CDS-3UTR GCA 90 bp | CAACAGAACCACGAGGTCACCATCATTCCCTGTAAAACAAGGCTGGCCTGGCAAAAAGACTCGATGCTATaGGGGGCAGCAGCCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: QQNHEVTIIPCKTRLAWQKDSML*GAAAQL Trigger: CAGCTGGGCTGCTGCCCCGCATAGCATCGAGTCTTT...TTGCCAGGCCAGCCTTGTTTTACAGGGAATGATGGTGACCTCGTGGTTCTGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
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| CDS-3UTR GCA 90 bp | CCACACAGCTCTAGACTCTTAGCTAAGCTAACACCACCTGCCTTCCCTGCAACCTCACAGCACTGCAGCTaGCTACCGCTTCTGTACTCC | + |
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Preference number: 4 (lower is better) Translates to: PHSSRLLAKLTPPAFPATSQHCS*LPLLYS Trigger: GGAGTACAGAAGCGGTAGGCAGCTGCAGTGCTGTGA...GGTTGCAGGGAAGGCAGGTGGTGTTAGCTTAGCTAAGAGTCTAGAGCTGTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
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| CDS-3UTR GCA 90 bp | AGCTCTAGACTCTTAGCTAAGCTAACACCACCTGCCTTCCCTGCAACCCGGCAGTGTCTGAACACCAGCTaGTGTCTGCTGGCATCAAGC | + |
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Preference number: 4 (lower is better) Translates to: SSRLLAKLTPPAFPATRQCLNTS*CLLASS Trigger: GCTTGATGCCAGCAGACAGCAGCTGGTGTTCAGACA...CTGCCGGGTTGCAGGGAAGGCAGGTGGTGTTAGCTTAGCTAAGAGTCTAGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
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| CDS-3UTR GCA 90 bp | AAATTGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAACGACCCGGGAAGGGGCTCCTTTaGCGCTTCTTCTTCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: KLPWCLIRDWWAAFWERPGKGLL*RFFFSC Trigger: GCAGCTGAAGAAGAAGCGGCAAAGGAGCCCCTTCCC...GGGTCGTTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171171.9 |
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| CDS-3UTR GCA 90 bp | AGTGACAAAGGCAGACTCTGGAGATCAGGGACTGTTGAGCTAGTGGTAGGGACTGGGAAGGGGCTCCTTTaGCGCTTCTTCTTCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SDKGRLWRSGTVELVVGTGKGLL*RFFFSC Trigger: GCAGCTGAAGAAGAAGCGGCAAAGGAGCCCCTTCCC...AGTCCCTACCACTAGCTCAACAGTCCCTGATCTCCAGAGTCTGCCTTTGTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
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| CDS-3UTR TCA 90 bp | CTTAGGAATAACCCCACCATGAAGGCCACCATCTCTCCTTTGACACAAGGACTCAAGTCAGCCGCTGTCTaGACACCAGCTGCTGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: LRNNPTMKATISPLTQGLKSAAV*TPAAVC Trigger: GCAGACAGCAGCTGGTGTTCAGACAGCGGCTGACTT...GAGTCCTTGTGTCAAAGGAGAGATGGTGGCCTTCATGGTGGGGTTATTCCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171171.9 |
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| CDS-3UTR GCA 90 bp | ACGAGGTCACCATCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGGTCACACCCCTTCTCATCCCGGTCTaGAGTAAGCACAAACTGGTC | + |
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Preference number: 4 (lower is better) Translates to: TRSPSFPVKQGWPGKVTPLLIPV*SKHKLV Trigger: GACCAGTTTGTGCTTACTGCAGACCGGGATGAGAAG...GGGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGATGGTGACCTCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
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| CDS-3UTR GCA 90 bp | CTCAGTGACAAAGGCAGACTCTGGAGATCAGGGACTGTTGAGCTAGTGGTAGGGTGTCTGAACACCAGCTaGTGTCTGCTGGCATCAAGC | + |
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Preference number: 4 (lower is better) Translates to: LSDKGRLWRSGTVELVVGCLNTS*CLLASS Trigger: GCTTGATGCCAGCAGACAGCAGCTGGTGTTCAGACA...CCCTACCACTAGCTCAACAGTCCCTGATCTCCAGAGTCTGCCTTTGTCACTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
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| CDS-3UTR CCA 90 bp | CAACAGAACCACGAGGTCACCATCATTCCCTGTAAAACAAGGCTGGCCTGGCAACCAGCTGCTGTCTGCTaGCATCAAGCTGGAAGACGA | + |
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Preference number: 4 (lower is better) Translates to: QQNHEVTIIPCKTRLAWQPAAVC*HQAGRR Trigger: TCGTCTTCCAGCTTGATGCCAGCAGACAGCAGCTGG...TTGCCAGGCCAGCCTTGTTTTACAGGGAATGATGGTGACCTCGTGGTTCTGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
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| CDS-3UTR TCA 90 bp | CAATCTCTCTCATATAAATTGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCCAAGACTCGGTCCTCTaGGGCTGTGAAGGTCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: QSLSYKLPWCLIRDWWAAQDSVL*GCEGQG Trigger: GCCCTGACCTTCACAGCCTCAGAGGACCGAGTCTTG...GGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTTATATGAGAGAGATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171171.9 |
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| CDS-3UTR CCA 90 bp | AGGTCACCATCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGGTCACACCCTCAGCAGTAAGCACAAACTaGTCATCAGGACTCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: RSPSFPVKQGWPGKVTPSAVSTN*SSGLTA Trigger: GGCTGTGAGTCCTGATGACCAGTTTGTGCTTACTGC...TGAGGGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGATGGTGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
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| 3UTR CAA 72 bp | TGGAGATGTTTAGAAGGATTAGGACTTAGGGCCTTGTaGATGTGTCATTGCCAGTGTGTCCGGCCTGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: WRCLEGLGLRAL*MCHCQCVRPAS Trigger: GGAGGCAGGCCGGACACACTGGCAATGACACATCAACAAGGCCCTAAGTCCTAATCCTTCTAAACATCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| CDS-3UTR GCA 90 bp | AGACAGGATCTCACAGAGCCCAAAATGTCACTGTTTAGGCTAGGCTGCCTCAGTCTTCTCATCCCGGTCTaGAGTAAGCACAAACTGGTC | + |
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Preference number: 4 (lower is better) Translates to: RQDLTEPKMSLFRLGCLSLLIPV*SKHKLV Trigger: GACCAGTTTGTGCTTACTGCAGACCGGGATGAGAAG...ACTGAGGCAGCCTAGCCTAAACAGTGACATTTTGGGCTCTGTGAGATCCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171171.9 |
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| CDS-3UTR GCA 90 bp | CTCAGTGACAAAGGCAGACTCTGGAGATCAGGGACTGTTGAGCTAGTGGTAGGGTTCTTCAGCTGCTGCTaGAGTCTCTCTTCCTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: LSDKGRLWRSGTVELVVGFFSCC*SLSSFF Trigger: GAAAAAGGAAGAGAGACTGCAGCAGCAGCTGAAGAA...CCCTACCACTAGCTCAACAGTCCCTGATCTCCAGAGTCTGCCTTTGTCACTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
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| CDS-3UTR CCA 90 bp | GTTCTCAGTGACAAAGGCAGACTCTGGAGATCAGGGACTGTTGAGCTAGTGGTAGCAGTAAGCACAAACTaGTCATCAGGACTCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: VLSDKGRLWRSGTVELVVAVSTN*SSGLTA Trigger: GGCTGTGAGTCCTGATGACCAGTTTGTGCTTACTGC...TACCACTAGCTCAACAGTCCCTGATCTCCAGAGTCTGCCTTTGTCACTGAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
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| 3UTR CAA 72 bp | GACGATGACACTGGGCATCTTCCTCGACTGTTCATCTaGAGACAGGATCTCACAGAGCCCAAAATGTCACTG | + |
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Preference number: 4 (lower is better) Translates to: DDDTGHLPRLFI*RQDLTEPKMSL Trigger: CAGTGACATTTTGGGCTCTGTGAGATCCTGTCTCAAGATGAACAGTCGAGGAAGATGCCCAGTGTCATCGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| 3UTR CAA 72 bp | TGTTGGAGATGTTTAGAAGGATTAGGACTTAGGGCCTaGTTGATGTGTCATTGCCAGTGTGTCCGGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: CWRCLEGLGLRA*LMCHCQCVRPA Trigger: GGCAGGCCGGACACACTGGCAATGACACATCAACAAGGCCCTAAGTCCTAATCCTTCTAAACATCTCCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| CDS-3UTR GCA 90 bp | TTCAATGTGAAGGTGCTTCCACACAGCTCTAGACTCTTAGCTAAGCTAACACCACCCAGAGTCTCAGGGTaGCATCCCCAGAGGAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: FNVKVLPHSSRLLAKLTPPRVSG*HPQRKK Trigger: TTTCTTCCTCTGGGGATGGCACCCTGAGACTCTGGG...TGGTGTTAGCTTAGCTAAGAGTCTAGAGCTGTGTGGAAGCACCTTCACATTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
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| CDS-3UTR GCA 90 bp | TCTCTCATTTATCTCCGACTAGTTAGGACCCAGCCCACAGCCCAGTTGGCACATTTCTTCAGCTGCTGCTaGAGTCTCTCTTCCTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: SLIYLRLVRTQPTAQLAHFFSCC*SLSSFF Trigger: GAAAAAGGAAGAGAGACTGCAGCAGCAGCTGAAGAA...ATGTGCCAACTGGGCTGTGGGCTGGGTCCTAACTAGTCGGAGATAAATGAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171171.9 |
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| 3UTR CAA 72 bp | TGGAACTGCAAGGCCAGTCAATCTCTCTCATATAAATaGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: WNCKASQSLSYK*PWCLIRDWWAA Trigger: GGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTTATATGAGAGAGATTGACTGGCCTTGCAGTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| CDS-3UTR CCA 90 bp | TTAAGATCAGCTATGGAGGCTGCTGCTGAACATTCCAGAAAGCTATGCAAAGTTCTGCTGGCATCAAGCTaGAAGACGAAGACCACGGGA | + |
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Preference number: 4 (lower is better) Translates to: LRSAMEAAAEHSRKLCKVLLASS*KTKTTG Trigger: TCCCGTGGTCTTCGTCTTCCAGCTTGATGCCAGCAG...AACTTTGCATAGCTTTCTGGAATGTTCAGCAGCAGCCTCCATAGCTGATCTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171171.9 |
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| CDS-3UTR GCA 90 bp | TCATATAAATTGCCTTGGTGTCTTATCAGAGACTGGTGGGCAGCCTTTTGGGAATGGGCACTACAAGGATaGGGCTCACAAACTCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: SYKLPWCLIRDWWAAFWEWALQG*GSQTQC Trigger: ACACTGAGTTTGTGAGCCGCATCCTTGTAGTGCCCA...TTCCCAAAAGGCTGCCCACCAGTCTCTGATAAGACACCAAGGCAATTTATATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171171.9 |
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| CDS-3UTR TCA 90 bp | CAAGAGCCATGTCATTTGAAGAGCATACACACATTGAATGTCTTAAGATCAGCTTCCGCACCACCATCCTaGCACTCAGACATTGCCATG | + |
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Preference number: 4 (lower is better) Translates to: QEPCHLKSIHTLNVLRSASAPPS*HSDIAM Trigger: CATGGCAATGTCTGAGTGTCAGGATGGTGGTGCGGA...AGCTGATCTTAAGACATTCAATGTGTGTATGCTCTTCAAATGACATGGCTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171171.9 |
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| CDS-3UTR TCA 90 bp | CAAGAGCCATGTCATTTGAAGAGCATACACACATTGAATGTCTTAAGATCAGCTAGCAGCAGTTCAGGATaGCTGGGCACTACAAGGATG | + |
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Preference number: 4 (lower is better) Translates to: QEPCHLKSIHTLNVLRSASSSSG*LGTTRM Trigger: CATCCTTGTAGTGCCCAGTCATCCTGAACTGCTGCT...AGCTGATCTTAAGACATTCAATGTGTGTATGCTCTTCAAATGACATGGCTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171171.9 |
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| 3UTR CAA 72 bp | ATTAGGGTTACAGTTATGCTAGGCTATGGCCTTCCTTaGTTCTGTATGTTTGGGTGGTACCTAAACTCGGGT | + |
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Preference number: 4 (lower is better) Translates to: IRVTVMLGYGLP*FCMFGWYLNSG Trigger: ACCCGAGTTTAGGTACCACCCAAACATACAGAACAAAGGAAGGCCATAGCCTAGCATAACTGTAACCCTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 |
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| CDS CCA 90 bp | GTGGAGAAGGCTAGGAACCGGCTGCCTCCTCGCACCACCAGCGTCTaGGCGCACAGTGCCAGCCCCGCAGAGCTCGCCATGGGCCCGCCC | + |
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Preference number: 5 (lower is better) Translates to: VEKARNRLPPRTTSV*AHSASPAELAMGPP Trigger: GGGCGGGCCCATGGCGAGCTCTGCGGGGCTGGCACTGTGCGCCCAGACGCTGGTGGTGCGAGGAGGCAGCCGGTTCCTAGCCTTCTCCAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
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| CDS-3UTR CAA 90 bp | ACCATCATTCCCTGTAAAACAAGGCTGGCCTGGCAAGGTCACACCCTCAGAGCCGACGCGGCCAACCCCTaGTGGCCTGGCTGCTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: TIIPCKTRLAWQGHTLRADAANP*WPGCSP Trigger: TGGAGAGCAGCCAGGCCACAAGGGGTTGGCCGCGTC...GGCTCTGAGGGTGTGACCTTGCCAGGCCAGCCTTGTTTTACAGGGAATGATGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171171.9 ENSMUST00000236665.2 |
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| CDS GCA 72 bp | GCTGCCTCCTCGCACCACCAGCGTCTGGGCGCACAGTaGCAGCCCCGCAGAGCTCGCCATGGGCCCGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: AASSHHQRLGAQ*QPRRARHGPAR Trigger: GCGGGCGGGCCCATGGCGAGCTCTGCGGGGCTGGCACTGTGCGCCCAGACGCTGGTGGTGCGAGGAGGCAGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
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| CDS GCA 72 bp | AGCTCGCCATGGGCCCGCCCGCCGCCTCCGGACACGTaGGACGCGCTGCGCCCTTCCTGTTGGCGCTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: SSPWARPPPPDT*DALRPSCWRLS Trigger: TGACAAGCGCCAACAGGAAGGGCGCAGCGCGTCGCACGTGTCCGGAGGCGGCGGGCGGGCCCATGGCGAGCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171171.9 |
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| CDS CCA 72 bp | GCTAGGAACCGGCTGCCTCCTCGCACCACCAGCGTCTaGGCGCACAGTGCCAGCCCCGCAGAGCTCGCCATG | + |
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Preference number: 6 (lower is better) Translates to: ARNRLPPRTTSV*AHSASPAELAM Trigger: CATGGCGAGCTCTGCGGGGCTGGCACTGTGCGCCCAGACGCTGGTGGTGCGAGGAGGCAGCCGGTTCCTAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170176.9 ENSMUST00000171171.9 ENSMUST00000172284.9 ENSMUST00000236665.2 |
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