Pregenerated sensors for WDR38 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035295Ensembl transcript IDs: ENSMUST00000039535.9, ENSMUST00000112872.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGAAGGCAGGACTTCCGGGAAGCGGAGGGCACCACGGCCGCGGCTaGGCAGGGGCGGAGCGGGCCTCCCAAACCGCGACGCTATTGGCC | + |
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Preference number: 1 (lower is better) Translates to: RKAGLPGSGGHHGRG*AGAERASQTATLLA Trigger: GGCCAATAGCGTCGCGGTTTGGGAGGCCCGCTCCGCCCCTGCGCAGCCGCGGCCGTGGTGCCCTCCGCTTCCCGGAAGTCCTGCCTTCCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR CCA 90 bp | TGCCCGCCCTCGCTTACGCCGCGGCCTCTGGCGCACCGTCCCTCCTaGGTCGGCCGGGGACGAAGCGGGAGCTCCGTGACCCATAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: CPPSLTPRPLAHRPS*VGRGRSGSSVTHRV Trigger: GACTCTATGGGTCACGGAGCTCCCGCTTCGTCCCCGGCCGACCCAGGAGGGACGGTGCGCCAGAGGCCGCGGCGTAAGCGAGGGCGGGCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR TCA 90 bp | AAACCGCGACGCTATTGGCCGTGCCCGGCGCCACCCGGCAGTAGTTaGGGAAGTCGGCCCCGCCCTTTCCTCTTTCTCTCGAACCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: KPRRYWPCPAPPGSS*GSRPRPFLFLSNQA Trigger: AGCCTGGTTCGAGAGAAAGAGGAAAGGGCGGGGCCGACTTCCTCAACTACTGCCGGGTGGCGCCGGGCACGGCCAATAGCGTCGCGGTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR CCA 90 bp | AGGTCGAACCTGACCACTTGCGTTCGACGTTCGAGCGCCGAACAGTaGAAGAAGAGAACTCCCACAGGTTGTTCTCCAACCTCCATGCTC | + |
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Preference number: 1 (lower is better) Translates to: RSNLTTCVRRSSAEQ*KKRTPTGCSPTSML Trigger: GAGCATGGAGGTTGGAGAACAACCTGTGGGAGTTCTCTTCTTCCACTGTTCGGCGCTCGAACGTCGAACGCAAGTGGTCAGGTTCGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR CCA 90 bp | GAAGAAGAGAACTCCCACAGGTTGTTCTCCAACCTCCATGCTCGCTaGCTCTCTCACATACACTTGCGAGGCATTGTGGCACTTGTACTG | + |
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Preference number: 1 (lower is better) Translates to: EEENSHRLFSNLHAR*LSHIHLRGIVALVL Trigger: CAGTACAAGTGCCACAATGCCTCGCAAGTGTATGTGAGAGAGCCAGCGAGCATGGAGGTTGGAGAACAACCTGTGGGAGTTCTCTTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR CCA 90 bp | CTCCGCAAATTCTTGCTGGATGACTTTATTGTTACCCTTGCCAGGTaGTGGCGCACTTTGGATACCAAACTTGGGTACAAAACAAGTCCA | + |
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Preference number: 1 (lower is better) Translates to: LRKFLLDDFIVTLAR*WRTLDTKLGYKTSP Trigger: TGGACTTGTTTTGTACCCAAGTTTGGTATCCAAAGTGCGCCACCACCTGGCAAGGGTAACAATAAAGTCATCCAGCAAGAATTTGCGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR CCA 90 bp | GGGATGAGATTTGTACTACTACATACCATCTCCGCAAATTCTTGCTaGATGACTTTATTGTTACCCTTGCCAGGTGGTGGCGCACTTTGG | + |
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Preference number: 1 (lower is better) Translates to: GMRFVLLHTISANSC*MTLLLPLPGGGALW Trigger: CCAAAGTGCGCCACCACCTGGCAAGGGTAACAATAAAGTCATCCAGCAAGAATTTGCGGAGATGGTATGTAGTAGTACAAATCTCATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR CCA 90 bp | AGCACGATTTGGAATCTCTCTGGAGACGGTTTCATTAATATATCTTaGTGTAATAAAGAAGGCTTGAACTCCGGATCCTCCTTTTCCACT | + |
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Preference number: 1 (lower is better) Translates to: STIWNLSGDGFINIS*CNKEGLNSGSSFST Trigger: AGTGGAAAAGGAGGATCCGGAGTTCAAGCCTTCTTTATTACACCAAGATATATTAATGAAACCGTCTCCAGAGAGATTCCAAATCGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR-3UTR TCA 90 bp | CACCACGGCCGCGGCTGCGCAGGGGCGGAGCGGGCCTCCCAAACCGCGACGCTACCACCCGGCAGTAGTTaGGGAAGTCGGCCCCGCCCT | + |
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Preference number: 2 (lower is better) Translates to: HHGRGCAGAERASQTATLPPGSS*GSRPRP Trigger: AGGGCGGGGCCGACTTCCTCAACTACTGCCGGGTGG...TAGCGTCGCGGTTTGGGAGGCCCGCTCCGCCCCTGCGCAGCCGCGGCCGTGGTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR-3UTR CCA 90 bp | CGCACCCTGACACCACCCGCGGCTAGCTCAGCCCCGCACAGACCAGAGAACTTCGCGCACCGTCCCTCCTaGGTCGGCCGGGGACGAAGC | + |
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Preference number: 2 (lower is better) Translates to: RTLTPPAASSAPHRPENFAHRPS*VGRGRS Trigger: GCTTCGTCCCCGGCCGACCCAGGAGGGACGGTGCGC...GAAGTTCTCTGGTCTGTGCGGGGCTGAGCTAGCCGCGGGTGGTGTCAGGGTGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR-3UTR GCA 90 bp | CGCACCCTGACACCACCCGCGGCTAGCTCAGCCCCGCACAGACCAGAGAACTTCCAGCCTTCTCTGCGCTaGCTCCAGCCAGCCCGGTGT | + |
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Preference number: 2 (lower is better) Translates to: RTLTPPAASSAPHRPENFQPSLR*LQPARC Trigger: ACACCGGGCTGGCTGGAGGCAGCGCAGAGAAGGCTG...GAAGTTCTCTGGTCTGTGCGGGGCTGAGCTAGCCGCGGGTGGTGTCAGGGTGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR-3UTR GCA 90 bp | CTTTTAAAGAAAACCCTCACACCTCATGCCCTCCGCACCCTGACACCACCCGCGAGCGGCTGTATCCTCTaGGCAAGTATGCAGTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: LLKKTLTPHALRTLTPPASGCIL*ASMQSR Trigger: CCTTGACTGCATACTTGCGCAGAGGATACAGCCGCT...CGCGGGTGGTGTCAGGGTGCGGAGGGCATGAGGTGTGAGGGTTTTCTTTAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR-3UTR GCA 90 bp | GAATGCACACAGCTTTGTGCATGCCAGGGAAACACTACCACGGAACTAAGCTACAACTGCAGCCTTCTCTaGGCTGCCTCCAGCCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: ECTQLCACQGNTTTELSYNCSLL*AASSQP Trigger: GGGCTGGCTGGAGGCAGCGCAGAGAAGGCTGCAGTT...GTAGCTTAGTTCCGTGGTAGTGTTTCCCTGGCATGCACAAAGCTGTGTGCATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR-3UTR GCA 90 bp | ACACAGCTTTGTGCATGCCAGGGAAACACTACCACGGAACTAAGCTACCAGCACAACCCTCACACCTCATaGCCTCCGCACCCTGACACC | + |
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Preference number: 2 (lower is better) Translates to: TQLCACQGNTTTELSYQHNPHTS*PPHPDT Trigger: GGTGTCAGGGTGCGGAGGGCATGAGGTGTGAGGGTT...GTGCTGGTAGCTTAGTTCCGTGGTAGTGTTTCCCTGGCATGCACAAAGCTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR-3UTR GCA 90 bp | ACAGTGGAAGAAGAGAACTCCCACAGGTTGTTCTCCAACCTCCATGCTCGCTGGAGAGTCGCTCCTCATTaGAGGCCAAGATTAAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: TVEEENSHRLFSNLHARWRVAPH*RPRLRL Trigger: GAGCCTTAATCTTGGCCTGCAATGAGGAGCGACTCT...CCAGCGAGCATGGAGGTTGGAGAACAACCTGTGGGAGTTCTCTTCTTCCACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR-3UTR CCA 90 bp | GAATGCACACAGCTTTGTGCATGCCAGGGAAACACTACCACGGAACTAAGCTACGTTACCCTTGCCAGGTaGTGGCGCACTTTGGATACC | + |
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Preference number: 2 (lower is better) Translates to: ECTQLCACQGNTTTELSYVTLAR*WRTLDT Trigger: GGTATCCAAAGTGCGCCACCACCTGGCAAGGGTAAC...GTAGCTTAGTTCCGTGGTAGTGTTTCCCTGGCATGCACAAAGCTGTGTGCATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR CAA 90 bp | AGGTTGTTCTCCAACCTCCATGCTCGCTGGCTCTCTCACATACACTaGCGAGGCATTGTGGCACTTGTACTGTCAGCATTAGGAAGCGAT | + |
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Preference number: 2 (lower is better) Translates to: RLFSNLHARWLSHIH*RGIVALVLSALGSD Trigger: ATCGCTTCCTAATGCTGACAGTACAAGTGCCACAATGCCTCGCAAGTGTATGTGAGAGAGCCAGCGAGCATGGAGGTTGGAGAACAACCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR-3UTR CCA 90 bp | CGCAAATTCTTGCTGGATGACTTTATTGTTACCCTTGCCAGGTGGTGGCGCACTAACCTCCATGCTCGCTaGCTCTCTCACATACACTTG | + |
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Preference number: 2 (lower is better) Translates to: RKFLLDDFIVTLARWWRTNLHAR*LSHIHL Trigger: CAAGTGTATGTGAGAGAGCCAGCGAGCATGGAGGTT...AGTGCGCCACCACCTGGCAAGGGTAACAATAAAGTCATCCAGCAAGAATTTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR CAA 90 bp | TCTGGGGATGAGATTTGTACTACTACATACCATCTCCGCAAATTCTaGCTGGATGACTTTATTGTTACCCTTGCCAGGTGGTGGCGCACT | + |
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Preference number: 2 (lower is better) Translates to: SGDEICTTTYHLRKF*LDDFIVTLARWWRT Trigger: AGTGCGCCACCACCTGGCAAGGGTAACAATAAAGTCATCCAGCAAGAATTTGCGGAGATGGTATGTAGTAGTACAAATCTCATCCCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR-3UTR TCA 90 bp | ATATCTTGGTGTAATAAAGAAGGCTTGAACTCCGGATCCTCCTTTTCCACTGCCCAAATTCTTGCTGGATaGCTTTATTGTTACCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: ISWCNKEGLNSGSSFSTAQILAG*LYCYPC Trigger: GCAAGGGTAACAATAAAGTCATCCAGCAAGAATTTG...GGCAGTGGAAAAGGAGGATCCGGAGTTCAAGCCTTCTTTATTACACCAAGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR GCA 72 bp | GGGGGAACTCAGAGAGCAGCGGGGGCCGGCTCAGGCTaGCCGCCCTCGCTTACGCCGCGGCCTCTGGCGCAC | + |
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Preference number: 3 (lower is better) Translates to: GGTQRAAGAGSG*PPSLTPRPLAH Trigger: GTGCGCCAGAGGCCGCGGCGTAAGCGAGGGCGGGCAGCCTGAGCCGGCCCCCGCTGCTCTCTGAGTTCCCCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR CCA 72 bp | GCTCAGGCTGCCCGCCCTCGCTTACGCCGCGGCCTCTaGCGCACCGTCCCTCCTGGGTCGGCCGGGGACGAA | + |
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Preference number: 3 (lower is better) Translates to: AQAARPRLRRGL*RTVPPGSAGDE Trigger: TTCGTCCCCGGCCGACCCAGGAGGGACGGTGCGCCAGAGGCCGCGGCGTAAGCGAGGGCGGGCAGCCTGAGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR CCA 72 bp | TCGCTTACGCCGCGGCCTCTGGCGCACCGTCCCTCCTaGGTCGGCCGGGGACGAAGCGGGAGCTCCGTGACC | + |
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Preference number: 3 (lower is better) Translates to: SLTPRPLAHRPS*VGRGRSGSSVT Trigger: GGTCACGGAGCTCCCGCTTCGTCCCCGGCCGACCCAGGAGGGACGGTGCGCCAGAGGCCGCGGCGTAAGCGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR TCA 72 bp | CGCTATTGGCCGTGCCCGGCGCCACCCGGCAGTAGTTaGGGAAGTCGGCCCCGCCCTTTCCTCTTTCTCTCG | + |
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Preference number: 3 (lower is better) Translates to: RYWPCPAPPGSS*GSRPRPFLFLS Trigger: CGAGAGAAAGAGGAAAGGGCGGGGCCGACTTCCTCAACTACTGCCGGGTGGCGCCGGGCACGGCCAATAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR GCA 72 bp | CAGCCTTCTCTGCGCTGCCTCCAGCCAGCCCGGTGTTaGTCATCGCGAGACTCAGTTTCCCCAGCTGGGTCG | + |
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Preference number: 3 (lower is better) Translates to: QPSLRCLQPARC*SSRDSVSPAGS Trigger: CGACCCAGCTGGGGAAACTGAGTCTCGCGATGAGCAACACCGGGCTGGCTGGAGGCAGCGCAGAGAAGGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR-3UTR CAA 90 bp | ACACAGCTTTGTGCATGCCAGGGAAACACTACCACGGAACTAAGCTACCAGCACCCAGCCAGCCCGGTGTaGCTCATCGCGAGACTCAGT | + |
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Preference number: 3 (lower is better) Translates to: TQLCACQGNTTTELSYQHPASPV*LIARLS Trigger: ACTGAGTCTCGCGATGAGCAACACCGGGCTGGCTGG...GTGCTGGTAGCTTAGTTCCGTGGTAGTGTTTCCCTGGCATGCACAAAGCTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR GCA 72 bp | TCAAGCTTCCGAATAAAACCGAGGGAACAGAAGAACTaGAGCCTTCTCTGCGCTGCCTCCAGCCAGCCCGGT | + |
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Preference number: 3 (lower is better) Translates to: SSFRIKPREQKN*SLLCAASSQPG Trigger: ACCGGGCTGGCTGGAGGCAGCGCAGAGAAGGCTGCAGTTCTTCTGTTCCCTCGGTTTTATTCGGAAGCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR CCA 72 bp | AACTCCCACAGGTTGTTCTCCAACCTCCATGCTCGCTaGCTCTCTCACATACACTTGCGAGGCATTGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: NSHRLFSNLHAR*LSHIHLRGIVA Trigger: TGCCACAATGCCTCGCAAGTGTATGTGAGAGAGCCAGCGAGCATGGAGGTTGGAGAACAACCTGTGGGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR-3UTR CAA 90 bp | ACAGTGGAAGAAGAGAACTCCCACAGGTTGTTCTCCAACCTCCATGCTCGCTGGTACACTTGCGAGGCATaGTGGCACTTGTACTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: TVEEENSHRLFSNLHARWYTCEA*WHLYCQ Trigger: CTGACAGTACAAGTGCCACAATGCCTCGCAAGTGTA...CCAGCGAGCATGGAGGTTGGAGAACAACCTGTGGGAGTTCTCTTCTTCCACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR GCA 72 bp | GATCTGGTGGCTGCTTTCTTAGTTACCTTAGGCCTGTaGGTAAGCTACATGGGAGAGGTTCTCGACTTTGAG | + |
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Preference number: 3 (lower is better) Translates to: DLVAAFLVTLGL*VSYMGEVLDFE Trigger: CTCAAAGTCGAGAACCTCTCCCATGTAGCTTACGCACAGGCCTAAGGTAACTAAGAAAGCAGCCACCAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
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| 3UTR TCA 72 bp | TACTACTACATACCATCTCCGCAAATTCTTGCTGGATaGCTTTATTGTTACCCTTGCCAGGTGGTGGCGCAC | + |
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Preference number: 3 (lower is better) Translates to: YYYIPSPQILAG*LYCYPCQVVAH Trigger: GTGCGCCACCACCTGGCAAGGGTAACAATAAAGTCATCCAGCAAGAATTTGCGGAGATGGTATGTAGTAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR GCA 72 bp | CGGAGCTTTTATTTATTCTTGTATCAGTGCCGGGAATaGACACAGCTTTGTGCATGCCAGGGAAACACTACC | + |
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Preference number: 3 (lower is better) Translates to: RSFYLFLYQCRE*TQLCACQGNTT Trigger: GGTAGTGTTTCCCTGGCATGCACAAAGCTGTGTGCATTCCCGGCACTGATACAAGAATAAATAAAAGCTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR CCA 72 bp | ACTTTATTGTTACCCTTGCCAGGTGGTGGCGCACTTTaGATACCAAACTTGGGTACAAAACAAGTCCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: TLLLPLPGGGAL*IPNLGTKQVQE Trigger: CTCCTGGACTTGTTTTGTACCCAAGTTTGGTATCCAAAGTGCGCCACCACCTGGCAAGGGTAACAATAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR CCA 72 bp | TTGCTGGATGACTTTATTGTTACCCTTGCCAGGTGGTaGCGCACTTTGGATACCAAACTTGGGTACAAAACA | + |
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Preference number: 3 (lower is better) Translates to: LLDDFIVTLARW*RTLDTKLGYKT Trigger: TGTTTTGTACCCAAGTTTGGTATCCAAAGTGCGCCACCACCTGGCAAGGGTAACAATAAAGTCATCCAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR CCA 72 bp | TTTGTACTACTACATACCATCTCCGCAAATTCTTGCTaGATGACTTTATTGTTACCCTTGCCAGGTGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: FVLLHTISANSC*MTLLLPLPGGG Trigger: GCCACCACCTGGCAAGGGTAACAATAAAGTCATCCAGCAAGAATTTGCGGAGATGGTATGTAGTAGTACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| 3UTR TCA 72 bp | AAAGCAATAATCAGAAATCCCACAAAAGTCTGGGGATaGGATTTGTACTACTACATACCATCTCCGCAAATT | + |
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Preference number: 3 (lower is better) Translates to: KAIIRNPTKVWG*DLYYYIPSPQI Trigger: AATTTGCGGAGATGGTATGTAGTAGTACAAATCTCATCCCCAGACTTTTGTGGGATTTCTGATTATTGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| CDS-3UTR CCA 90 bp | CGGCTCAGGCTGCCCGCCCTCGCTTACGCCGCGGCCTCTGGCGCACCGTCCCTCGTGGTAGGACACAACTaGGGTGGATGCCCGCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: RLRLPALAYAAASGAPSLVVGHN*GGCPQV Trigger: GACTTGCGGGCATCCACCCCAGTTGTGTCCTACCAC...GAGGGACGGTGCGCCAGAGGCCGCGGCGTAAGCGAGGGCGGGCAGCCTGAGCCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| CDS-3UTR CCA 90 bp | GGGGAACTCAGAGAGCAGCGGGGGCCGGCTCAGGCTGCCCGCCCTCGCTTACGCACAGCAAGACTTCACTaGGCCTCTGTGGCCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: GELREQRGPAQAARPRLRTARLH*ASVACQ Trigger: CTGGCAGGCCACAGAGGCCCAGTGAAGTCTTGCTGT...GCGTAAGCGAGGGCGGGCAGCCTGAGCCGGCCCCCGCTGCTCTCTGAGTTCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| CDS-3UTR CCA 90 bp | CACCACGGCCGCGGCTGCGCAGGGGCGGAGCGGGCCTCCCAAACCGCGACGCTAGCACATGTAGACACTTaGACCTTGCCACATCCCACA | + |
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Preference number: 4 (lower is better) Translates to: HHGRGCAGAERASQTATLAHVDT*TLPHPT Trigger: TGTGGGATGTGGCAAGGTCCAAGTGTCTACATGTGC...TAGCGTCGCGGTTTGGGAGGCCCGCTCCGCCCCTGCGCAGCCGCGGCCGTGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| CDS-3UTR CCA 90 bp | CGGCTCAGGCTGCCCGCCCTCGCTTACGCCGCGGCCTCTGGCGCACCGTCCCTCAGTCACTGCTCTGGATaGAATCACAATGCCCAACCA | + |
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Preference number: 4 (lower is better) Translates to: RLRLPALAYAAASGAPSLSHCSG*NHNAQP Trigger: TGGTTGGGCATTGTGATTCCATCCAGAGCAGTGACT...GAGGGACGGTGCGCCAGAGGCCGCGGCGTAAGCGAGGGCGGGCAGCCTGAGCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| CDS-3UTR CCA 90 bp | CGCACCCTGACACCACCCGCGGCTAGCTCAGCCCCGCACAGACCAGAGAACTTCGTGAAAATGCAGGCATaGGCCACATCCAGCATGCCC | + |
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Preference number: 4 (lower is better) Translates to: RTLTPPAASSAPHRPENFVKMQA*ATSSMP Trigger: GGGCATGCTGGATGTGGCCCATGCCTGCATTTTCAC...GAAGTTCTCTGGTCTGTGCGGGGCTGAGCTAGCCGCGGGTGGTGTCAGGGTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| CDS-3UTR TCA 90 bp | CTTTTAAAGAAAACCCTCACACCTCATGCCCTCCGCACCCTGACACCACCCGCGTGGAGGAGCTGGCAATaGGGCGGCCATCGGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: LLKKTLTPHALRTLTPPAWRSWQ*GGHRER Trigger: TCTCTCCCGATGGCCGCCTCATTGCCAGCTCCTCCA...CGCGGGTGGTGTCAGGGTGCGGAGGGCATGAGGTGTGAGGGTTTTCTTTAAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| CDS-3UTR GCA 90 bp | CGCACCCTGACACCACCCGCGGCTAGCTCAGCCCCGCACAGACCAGAGAACTTCTGGATGGAATCACAATaGCCAACCAAGAGGTGCACC | + |
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Preference number: 4 (lower is better) Translates to: RTLTPPAASSAPHRPENFWMESQ*PTKRCT Trigger: GGTGCACCTCTTGGTTGGGCATTGTGATTCCATCCA...GAAGTTCTCTGGTCTGTGCGGGGCTGAGCTAGCCGCGGGTGGTGTCAGGGTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| CDS-3UTR GCA 90 bp | AGGAAGTCGGCCCCGCCCTTTCCTCTTTCTCTCGAACCAGGCTGCTTCAGCCGTGGGCCACATCCAGCATaGCCTTTAGGGTCTCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: RKSAPPFPLSLEPGCFSRGPHPA*PLGSQG Trigger: GCCTTGAGACCCTAAAGGGCATGCTGGATGTGGCCC...ACGGCTGAAGCAGCCTGGTTCGAGAGAAAGAGGAAAGGGCGGGGCCGACTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| CDS-3UTR TCA 90 bp | AGGAAGTCGGCCCCGCCCTTTCCTCTTTCTCTCGAACCAGGCTGCTTCAGCCGTGGCAGTCCCAGACTTTaGCCGTACGAGAGTAACCAG | + |
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Preference number: 4 (lower is better) Translates to: RKSAPPFPLSLEPGCFSRGSPRL*PYESNQ Trigger: CTGGTTACTCTCGTACGGTCAAAGTCTGGGACTGCC...ACGGCTGAAGCAGCCTGGTTCGAGAGAAAGAGGAAAGGGCGGGGCCGACTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| CDS-3UTR GCA 90 bp | GGGGGCCAGGTGACCACTTGCCTACAGCAGATAACAGCCTTGTTATGGAGTAGGCCACCTGATGCCAGCTaGTTGGAGTCCGGGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: GGQVTTCLQQITALLWSRPPDAS*LESGLK Trigger: CTTCAGCCCGGACTCCAAGCAGCTGGCATCAGGTGG...CCTACTCCATAACAAGGCTGTTATCTGCTGTAGGCAAGTGGTCACCTGGCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
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| CDS-3UTR GCA 90 bp | GGTTGTTCTCCAACCTCCATGCTCGCTGGCTCTCTCACATACACTTGCGAGGCAACCCTGCGGCCAGACTaGACTTCCCAGACAATCGCT | + |
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Preference number: 4 (lower is better) Translates to: GCSPTSMLAGSLTYTCEATLRPD*TSQTIA Trigger: AGCGATTGTCTGGGAAGTGCAGTCTGGCCGCAGGGT...TGCCTCGCAAGTGTATGTGAGAGAGCCAGCGAGCATGGAGGTTGGAGAACAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| CDS-3UTR GCA 90 bp | ACACAGCTTTGTGCATGCCAGGGAAACACTACCACGGAACTAAGCTACCAGCACCCAAGAGGTGCACCCTaGGGCCAGACTGCACTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TQLCACQGNTTTELSYQHPRGAP*GQTALP Trigger: GGGAAGTGCAGTCTGGCCGCAGGGTGCACCTCTTGG...GTGCTGGTAGCTTAGTTCCGTGGTAGTGTTTCCCTGGCATGCACAAAGCTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
||
| CDS-3UTR CCA 90 bp | CTTTTAAAGAAAACCCTCACACCTCATGCCCTCCGCACCCTGACACCACCCGCGAGTCCCAGGAACCAGTaGCCAGAGAATCCGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLKKTLTPHALRTLTPPASPRNQ*PENPRL Trigger: CAACCTCGGATTCTCTGGCCACTGGTTCCTGGGACT...CGCGGGTGGTGTCAGGGTGCGGAGGGCATGAGGTGTGAGGGTTTTCTTTAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
||
| CDS-3UTR TCA 90 bp | GGTTGTTCTCCAACCTCCATGCTCGCTGGCTCTCTCACATACACTTGCGAGGCAATCTTGTTGGGGCTCTaGTGTTCATGGGCGCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GCSPTSMLAGSLTYTCEAILLGL*CSWAPT Trigger: AGTGGGCGCCCATGAACATCAGAGCCCCAACAAGAT...TGCCTCGCAAGTGTATGTGAGAGAGCCAGCGAGCATGGAGGTTGGAGAACAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
||
| CDS-3UTR TCA 90 bp | GGGGGCCAGGTGACCACTTGCCTACAGCAGATAACAGCCTTGTTATGGAGTAGGATCTTGTTGGGGCTCTaGTGTTCATGGGCGCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GGQVTTCLQQITALLWSRILLGL*CSWAPT Trigger: AGTGGGCGCCCATGAACATCAGAGCCCCAACAAGAT...CCTACTCCATAACAAGGCTGTTATCTGCTGTAGGCAAGTGGTCACCTGGCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
||
| CDS-3UTR TCA 90 bp | ACAGTGGAAGAAGAGAACTCCCACAGGTTGTTCTCCAACCTCCATGCTCGCTGGCTTGTCCCAACCACCTaGTGCCAGCTGCTTGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TVEEENSHRLFSNLHARWLVPTT*CQLLGV Trigger: GACTCCAAGCAGCTGGCATCAGGTGGTTGGGACAAG...CCAGCGAGCATGGAGGTTGGAGAACAACCTGTGGGAGTTCTCTTCTTCCACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
||
| CDS-3UTR TCA 90 bp | CTTTTAAAGAAAACCCTCACACCTCATGCCCTCCGCACCCTGACACCACCCGCGGTATGGCCCTTGAGCTaGAGAGGCAGGTTGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLKKTLTPHALRTLTPPAVWPLS*RGRLLV Trigger: AACCAACAACCTGCCTCTTCAGCTCAAGGGCCATAC...CGCGGGTGGTGTCAGGGTGCGGAGGGCATGAGGTGTGAGGGTTTTCTTTAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
||
| CDS-3UTR GCA 90 bp | GTGGCTGCTTTCTTAGTTACCTTAGGCCTGTGCGTAAGCTACATGGGAGAGGTTCCAAGAGGTGCACCCTaGGGCCAGACTGCACTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VAAFLVTLGLCVSYMGEVPRGAP*GQTALP Trigger: GGGAAGTGCAGTCTGGCCGCAGGGTGCACCTCTTGG...AACCTCTCCCATGTAGCTTACGCACAGGCCTAAGGTAACTAAGAAAGCAGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTGCTGCAGAGATCTGGTGGCTGCTTTCTTAGTTACCTTAGGCCTGTGCGTGGGCCACATCCAGCATaGCCTTTAGGGTCTCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLQRSGGCFLSYLRPVRGPHPA*PLGSQG Trigger: GCCTTGAGACCCTAAAGGGCATGCTGGATGTGGCCC...ACGCACAGGCCTAAGGTAACTAAGAAAGCAGCCACCAGATCTCTGCAGCAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTGCTGCAGAGATCTGGTGGCTGCTTTCTTAGTTACCTTAGGCCTGTGCGTACAGCAAGACTTCACTaGGCCTCTGTGGCCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLQRSGGCFLSYLRPVRTARLH*ASVACQ Trigger: CTGGCAGGCCACAGAGGCCCAGTGAAGTCTTGCTGT...ACGCACAGGCCTAAGGTAACTAAGAAAGCAGCCACCAGATCTCTGCAGCAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTAAAGAAAACCCTCACACCTCATGCCCTCCGCACCCTGACACCACCCGCGGCTTCCAGACACAGATaGTCTTGTCCCAAGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLKKTLTPHALRTLTPPAASRHR*SCPKSQ Trigger: CTGGCTCTTGGGACAAGACCATCTGTGTCTGGAAGC...CGCGGGTGGTGTCAGGGTGCGGAGGGCATGAGGTGTGAGGGTTTTCTTTAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
||
| CDS-3UTR TCA 90 bp | GGTGGCTGCTTTCTTAGTTACCTTAGGCCTGTGCGTAAGCTACATGGGAGAGGTAGAAGGCAGAGCAGTTaGCCTCCCCGTGGTGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GGCFLSYLRPVRKLHGRGRRQSS*PPRGVD Trigger: GTCAACACCACGGGGAGGTCAACTGCTCTGCCTTCT...ACCTCTCCCATGTAGCTTACGCACAGGCCTAAGGTAACTAAGAAAGCAGCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
||
| CDS-3UTR GCA 90 bp | TTGCCAGGTGGTGGCGCACTTTGGATACCAAACTTGGGTACAAAACAAGTCCAGCATCCCACAGGCGGATaGTGTGGTCACTGGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPGGGALWIPNLGTKQVQHPTGG*CGHWRS Trigger: GCTCCTCCAGTGACCACAGCATCCGCCTGTGGGATG...CTGGACTTGTTTTGTACCCAAGTTTGGTATCCAAAGTGCGCCACCACCTGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
||
| CDS-3UTR GCA 90 bp | GCTGCTTTCTTAGTTACCTTAGGCCTGTGCGTAAGCTACATGGGAGAGGTTCTCCATCCCACAGGCGGATaGTGTGGTCACTGGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AAFLVTLGLCVSYMGEVLHPTGG*CGHWRS Trigger: GCTCCTCCAGTGACCACAGCATCCGCCTGTGGGATG...GAGAACCTCTCCCATGTAGCTTACGCACAGGCCTAAGGTAACTAAGAAAGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
||
| CDS-3UTR GCA 90 bp | CGCAAATTCTTGCTGGATGACTTTATTGTTACCCTTGCCAGGTGGTGGCGCACTCCACCTGATGCCAGCTaGTTGGAGTCCGGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RKFLLDDFIVTLARWWRTPPDAS*LESGLK Trigger: CTTCAGCCCGGACTCCAAGCAGCTGGCATCAGGTGG...AGTGCGCCACCACCTGGCAAGGGTAACAATAAAGTCATCCAGCAAGAATTTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
||
| CDS-3UTR TCA 90 bp | TTGCCAGGTGGTGGCGCACTTTGGATACCAAACTTGGGTACAAAACAAGTCCAGAGAAGGCAGAGCAGTTaGCCTCCCCGTGGTGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPGGGALWIPNLGTKQVQRRQSS*PPRGVD Trigger: GTCAACACCACGGGGAGGTCAACTGCTCTGCCTTCT...CTGGACTTGTTTTGTACCCAAGTTTGGTATCCAAAGTGCGCCACCACCTGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
||
| CDS-3UTR TCA 90 bp | GCTTTCTTAGTTACCTTAGGCCTGTGCGTAAGCTACATGGGAGAGGTTCTCGACCTTGTCCCAACCACCTaGTGCCAGCTGCTTGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AFLVTLGLCVSYMGEVLDLVPTT*CQLLGV Trigger: GACTCCAAGCAGCTGGCATCAGGTGGTTGGGACAAG...GTCGAGAACCTCTCCCATGTAGCTTACGCACAGGCCTAAGGTAACTAAGAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
||
| CDS-3UTR GCA 90 bp | AGGAAGTCGGCCCCGCCCTTTCCTCTTTCTCTCGAACCAGGCTGCTTCAGCCGTTTGGAGAGAAGTCACTaGTCTGGATGGAATCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: RKSAPPFPLSLEPGCFSRLERSH*SGWNHN Trigger: ATTGTGATTCCATCCAGAGCAGTGACTTCTCTCCAA...ACGGCTGAAGCAGCCTGGTTCGAGAGAAAGAGGAAAGGGCGGGGCCGACTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
||
| CDS-3UTR GCA 90 bp | ACAGTGGAAGAAGAGAACTCCCACAGGTTGTTCTCCAACCTCCATGCTCGCTGGCGCAAGTCCCATATGTaGACAGTCGAGTCCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TVEEENSHRLFSNLHARWRKSHM*TVESQE Trigger: TTCCTGGGACTCGACTGTGCACATATGGGACTTGCG...CCAGCGAGCATGGAGGTTGGAGAACAACCTGTGGGAGTTCTCTTCTTCCACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
||
| CDS-3UTR CCA 90 bp | GGCCAGGTGACCACTTGCCTACAGCAGATAACAGCCTTGTTATGGAGTAGGATAGTGGTAGGACACAACTaGGGTGGATGCCCGCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GQVTTCLQQITALLWSRIVVGHN*GGCPQV Trigger: GACTTGCGGGCATCCACCCCAGTTGTGTCCTACCAC...TATCCTACTCCATAACAAGGCTGTTATCTGCTGTAGGCAAGTGGTCACCTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
||
| CDS-3UTR TCA 90 bp | CCGAACAGTGGAAGAAGAGAACTCCCACAGGTTGTTCTCCAACCTCCATGCTCGAAATGGTATGGCCCTTaGGCTGAAGAGGCAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PNSGRRELPQVVLQPPCSKWYGP*AEEAGC Trigger: ACAACCTGCCTCTTCAGCTCAAGGGCCATACCATTT...CGAGCATGGAGGTTGGAGAACAACCTGTGGGAGTTCTCTTCTTCCACTGTTCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
||
| CDS-3UTR TCA 90 bp | TCCCTGCTGCAGAGATCTGGTGGCTGCTTTCTTAGTTACCTTAGGCCTGTGCGTAAATGGTATGGCCCTTaGGCTGAAGAGGCAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLQRSGGCFLSYLRPVRKWYGP*AEEAGC Trigger: ACAACCTGCCTCTTCAGCTCAAGGGCCATACCATTT...ACGCACAGGCCTAAGGTAACTAAGAAAGCAGCCACCAGATCTCTGCAGCAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
||
| CDS-3UTR TCA 90 bp | GGCCAGGTGACCACTTGCCTACAGCAGATAACAGCCTTGTTATGGAGTAGGATAGGCAGTCCCAGACTTTaGCCGTACGAGAGTAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GQVTTCLQQITALLWSRIGSPRL*PYESNQ Trigger: CTGGTTACTCTCGTACGGTCAAAGTCTGGGACTGCC...TATCCTACTCCATAACAAGGCTGTTATCTGCTGTAGGCAAGTGGTCACCTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTGCTGCAGAGATCTGGTGGCTGCTTTCTTAGTTACCTTAGGCCTGTGCGTTGGATGGAATCACAATaGCCAACCAAGAGGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SLLQRSGGCFLSYLRPVRWMESQ*PTKRCT Trigger: GGTGCACCTCTTGGTTGGGCATTGTGATTCCATCCA...ACGCACAGGCCTAAGGTAACTAAGAAAGCAGCCACCAGATCTCTGCAGCAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
||
| CDS-3UTR CCA 90 bp | GGTTGTTCTCCAACCTCCATGCTCGCTGGCTCTCTCACATACACTTGCGAGGCAGAGAAGTCACTGCTCTaGATGGAATCACAATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GCSPTSMLAGSLTYTCEAEKSLL*MESQCP Trigger: TGGGCATTGTGATTCCATCCAGAGCAGTGACTTCTC...TGCCTCGCAAGTGTATGTGAGAGAGCCAGCGAGCATGGAGGTTGGAGAACAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| CDS-3UTR CCA 90 bp | GCTTTCTTAGTTACCTTAGGCCTGTGCGTAAGCTACATGGGAGAGGTTCTCGACAGTCCCAGGAACCAGTaGCCAGAGAATCCGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AFLVTLGLCVSYMGEVLDSPRNQ*PENPRL Trigger: CAACCTCGGATTCTCTGGCCACTGGTTCCTGGGACT...GTCGAGAACCTCTCCCATGTAGCTTACGCACAGGCCTAAGGTAACTAAGAAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCTTTCTTAGTTACCTTAGGCCTGTGCGTAAGCTACATGGGAGAGGTTCTCGTGAAAATGCAGGCATaGGCCACATCCAGCATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AAFLVTLGLCVSYMGEVLVKMQA*ATSSMP Trigger: GGGCATGCTGGATGTGGCCCATGCCTGCATTTTCAC...GAGAACCTCTCCCATGTAGCTTACGCACAGGCCTAAGGTAACTAAGAAAGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
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| CDS-3UTR TCA 90 bp | GCTTTCTTAGTTACCTTAGGCCTGTGCGTAAGCTACATGGGAGAGGTTCTCGACGTATGGCCCTTGAGCTaGAGAGGCAGGTTGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AFLVTLGLCVSYMGEVLDVWPLS*RGRLLV Trigger: AACCAACAACCTGCCTCTTCAGCTCAAGGGCCATAC...GTCGAGAACCTCTCCCATGTAGCTTACGCACAGGCCTAAGGTAACTAAGAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
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| CDS-3UTR GCA 90 bp | GGCCAGGTGACCACTTGCCTACAGCAGATAACAGCCTTGTTATGGAGTAGGATACGCAAGTCCCATATGTaGACAGTCGAGTCCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GQVTTCLQQITALLWSRIRKSHM*TVESQE Trigger: TTCCTGGGACTCGACTGTGCACATATGGGACTTGCG...TATCCTACTCCATAACAAGGCTGTTATCTGCTGTAGGCAAGTGGTCACCTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTCTTAGTTACCTTAGGCCTGTGCGTAAGCTACATGGGAGAGGTTCTCGACGCTTCCAGACACAGATaGTCTTGTCCCAAGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AFLVTLGLCVSYMGEVLDASRHR*SCPKSQ Trigger: CTGGCTCTTGGGACAAGACCATCTGTGTCTGGAAGC...GTCGAGAACCTCTCCCATGTAGCTTACGCACAGGCCTAAGGTAACTAAGAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
||
| CDS-3UTR GCA 90 bp | GGGGGCCAGGTGACCACTTGCCTACAGCAGATAACAGCCTTGTTATGGAGTAGGTTGGAGAGAAGTCACTaGTCTGGATGGAATCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: GGQVTTCLQQITALLWSRLERSH*SGWNHN Trigger: ATTGTGATTCCATCCAGAGCAGTGACTTCTCTCCAA...CCTACTCCATAACAAGGCTGTTATCTGCTGTAGGCAAGTGGTCACCTGGCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCTTTCTTAGTTACCTTAGGCCTGTGCGTAAGCTACATGGGAGAGGTTCTCGCACATGTAGACACTTaGACCTTGCCACATCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: AAFLVTLGLCVSYMGEVLAHVDT*TLPHPT Trigger: TGTGGGATGTGGCAAGGTCCAAGTGTCTACATGTGC...GAGAACCTCTCCCATGTAGCTTACGCACAGGCCTAAGGTAACTAAGAAAGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGCTGCTTTCTTAGTTACCTTAGGCCTGTGCGTAAGCTACATGGGAGAGGTGAGAAGTCACTGCTCTaGATGGAATCACAATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGCFLSYLRPVRKLHGRGEKSLL*MESQCP Trigger: TGGGCATTGTGATTCCATCCAGAGCAGTGACTTCTC...ACCTCTCCCATGTAGCTTACGCACAGGCCTAAGGTAACTAAGAAAGCAGCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
||
| 3UTR CAA 72 bp | GACTTTATTGTTACCCTTGCCAGGTGGTGGCGCACTTaGGATACCAAACTTGGGTACAAAACAAGTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DFIVTLARWWRT*DTKLGYKTSPG Trigger: TCCTGGACTTGTTTTGTACCCAAGTTTGGTATCCAAAGTGCGCCACCACCTGGCAAGGGTAACAATAAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
||
| 3UTR CAA 72 bp | CATACCATCTCCGCAAATTCTTGCTGGATGACTTTATaGTTACCCTTGCCAGGTGGTGGCGCACTTTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: HTISANSCWMTL*LPLPGGGALWI Trigger: TATCCAAAGTGCGCCACCACCTGGCAAGGGTAACAATAAAGTCATCCAGCAAGAATTTGCGGAGATGGTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
||
| 3UTR CAA 72 bp | GGTTTCATTAATATATCTTGGTGTAATAAAGAAGGCTaGAACTCCGGATCCTCCTTTTCCACTGCCTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GFINISWCNKEG*NSGSSFSTAWA Trigger: CGCCCAGGCAGTGGAAAAGGAGGATCCGGAGTTCAAGCCTTCTTTATTACACCAAGATATATTAATGAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
||
| CDS-3UTR CAA 90 bp | CACCACGGCCGCGGCTGCGCAGGGGCGGAGCGGGCCTCCCAAACCGCGACGCTAGTAGACACTTGGACCTaGCCACATCCCACAGGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: HHGRGCAGAERASQTATLVDTWT*PHPTGG Trigger: TCCGCCTGTGGGATGTGGCAAGGTCCAAGTGTCTAC...TAGCGTCGCGGTTTGGGAGGCCCGCTCCGCCCCTGCGCAGCCGCGGCCGTGGTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
||
| CDS TCA 90 bp | CCACATCCCACAGGCGGATGCTGTGGTCACTGGAGGAGCTGGCAATaGGGCGGCCATCGGGAGAGAAACAGCAAGACTTCACTGGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PHPTGGCCGHWRSWQ*GGHRERNSKTSLGL Trigger: GAGGCCCAGTGAAGTCTTGCTGTTTCTCTCCCGATGGCCGCCTCATTGCCAGCTCCTCCAGTGACCACAGCATCCGCCTGTGGGATGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
||
| CDS CCA 90 bp | AGGCGGCCATCGGGAGAGAAACAGCAAGACTTCACTGGGCCTCTGTaGCCTGCCAGTCTCCATAGCAGTCGCCCACTCTTTGTCCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RRPSGEKQQDFTGPL*PASLHSSRPLFVPH Trigger: ATGGGGGACAAAGAGTGGGCGACTGCTATGGAGACTGGCAGGCCACAGAGGCCCAGTGAAGTCTTGCTGTTTCTCTCCCGATGGCCGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
||
| CDS TCA 90 bp | CAGTCGCCCACTCTTTGTCCCCCATACATACACACAGCCATCATCTaGGGCTGTGAGCAGGGTCCGGCCGTCAGGAGAGAAGGCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QSPTLCPPYIHTAII*GCEQGPAVRREGRA Trigger: TGCTCTGCCTTCTCTCCTGACGGCCGGACCCTGCTCACAGCCTCAGATGATGGCTGTGTGTATGTATGGGGGACAAAGAGTGGGCGACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
||
| CDS GCA 90 bp | GCCAGTGTGGCCCTCCAGATTGTGGTAGGACACAACTGGGGTGGATaGCCGCAAGTCCCATATGTGCACAGTCGAGTCCCAGGAACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ASVALQIVVGHNWGG*PQVPYVHSRVPGTS Trigger: ACTGGTTCCTGGGACTCGACTGTGCACATATGGGACTTGCGGGCATCCACCCCAGTTGTGTCCTACCACAATCTGGAGGGCCACACTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
||
| CDS TCA 90 bp | GCCAGACTGCACTTCCCAGACAATCGCTCTCTTGTCCCAACCACCTaGTGCCAGCTGCTTGGAGTCCGGGCTGAAGCTGACAGTTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ARLHFPDNRSLVPTT*CQLLGVRAEADSFH Trigger: GTGGAAACTGTCAGCTTCAGCCCGGACTCCAAGCAGCTGGCATCAGGTGGTTGGGACAAGAGAGCGATTGTCTGGGAAGTGCAGTCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
||
| CDS CCA 90 bp | ACATGTAGACACTTGGACCTTGCCACATCCCACAGGCGGATGCTGTaGTCACTGGAGGAGCTGGCAATGAGGCGGCCATCGGGAGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TCRHLDLATSHRRML*SLEELAMRRPSGEK Trigger: TTTCTCTCCCGATGGCCGCCTCATTGCCAGCTCCTCCAGTGACCACAGCATCCGCCTGTGGGATGTGGCAAGGTCCAAGTGTCTACATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
||
| CDS-3UTR CAA 90 bp | TCCCTGCTGCAGAGATCTGGTGGCTGCTTTCTTAGTTACCTTAGGCCTGTGCGTCCTGATGCCAGCTGCTaGGAGTCCGGGCTGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLQRSGGCFLSYLRPVRPDASC*ESGLKL Trigger: CAGCTTCAGCCCGGACTCCAAGCAGCTGGCATCAGG...ACGCACAGGCCTAAGGTAACTAAGAAAGCAGCCACCAGATCTCTGCAGCAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
||
| CDS GCA 90 bp | ACTTCCCAGACAATCGCTCTCTTGTCCCAACCACCTGATGCCAGCTaGTTGGAGTCCGGGCTGAAGCTGACAGTTTCCACACTCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSQTIALLSQPPDAS*LESGLKLTVSTLLW Trigger: CCAGAGGAGTGTGGAAACTGTCAGCTTCAGCCCGGACTCCAAGCAGCTGGCATCAGGTGGTTGGGACAAGAGAGCGATTGTCTGGGAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
||
| CDS GCA 90 bp | ATGGAATCACAATGCCCAACCAAGAGGTGCACCCTGCGGCCAGACTaGACTTCCCAGACAATCGCTCTCTTGTCCCAACCACCTGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: MESQCPTKRCTLRPD*TSQTIALLSQPPDA Trigger: GGCATCAGGTGGTTGGGACAAGAGAGCGATTGTCTGGGAAGTGCAGTCTGGCCGCAGGGTGCACCTCTTGGTTGGGCATTGTGATTCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
||
| CDS GCA 90 bp | CACTGCTCTGGATGGAATCACAATGCCCAACCAAGAGGTGCACCCTaGGGCCAGACTGCACTTCCCAGACAATCGCTCTCTTGTCCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: HCSGWNHNAQPRGAP*GQTALPRQSLSCPN Trigger: GTTGGGACAAGAGAGCGATTGTCTGGGAAGTGCAGTCTGGCCGCAGGGTGCACCTCTTGGTTGGGCATTGTGATTCCATCCAGAGCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
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| CDS GCA 90 bp | GAATCCGAGGTTGGAGAGAAGTCACTGCTCTGGATGGAATCACAATaGCCAACCAAGAGGTGCACCCTGCGGCCAGACTGCACTTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: ESEVGEKSLLWMESQ*PTKRCTLRPDCTSQ Trigger: CTGGGAAGTGCAGTCTGGCCGCAGGGTGCACCTCTTGGTTGGGCATTGTGATTCCATCCAGAGCAGTGACTTCTCTCCAACCTCGGATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
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| CDS GCA 90 bp | GAGAAGTCACTGCTCTGGATGGAATCACAATGCCCAACCAAGAGGTaGACCCTGCGGCCAGACTGCACTTCCCAGACAATCGCTCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: EKSLLWMESQCPTKR*TLRPDCTSQTIALL Trigger: CAAGAGAGCGATTGTCTGGGAAGTGCAGTCTGGCCGCAGGGTGCACCTCTTGGTTGGGCATTGTGATTCCATCCAGAGCAGTGACTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
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| CDS-3UTR CAA 90 bp | TTCTTGCTGGATGACTTTATTGTTACCCTTGCCAGGTGGTGGCGCACTTTGGATCCTGATGCCAGCTGCTaGGAGTCCGGGCTGAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: FLLDDFIVTLARWWRTLDPDASC*ESGLKL Trigger: CAGCTTCAGCCCGGACTCCAAGCAGCTGGCATCAGG...ATCCAAAGTGCGCCACCACCTGGCAAGGGTAACAATAAAGTCATCCAGCAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| CDS-3UTR CAA 90 bp | ACTCCCACAGGTTGTTCTCCAACCTCCATGCTCGCTGGCTCTCTCACATACACTGACCTCCCCGTGGTGTaGACCATAAAACCTCACTCT | + |
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Preference number: 5 (lower is better) Translates to: TPTGCSPTSMLAGSLTYTDLPVV*TIKPHS Trigger: AGAGTGAGGTTTTATGGTCAACACCACGGGGAGGTC...AGTGTATGTGAGAGAGCCAGCGAGCATGGAGGTTGGAGAACAACCTGTGGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| CDS-3UTR CAA 90 bp | GGTGGCTGCTTTCTTAGTTACCTTAGGCCTGTGCGTAAGCTACATGGGAGAGGTGCAGTCGCCCACTCTTaGTCCCCCATACATACACAC | + |
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Preference number: 5 (lower is better) Translates to: GGCFLSYLRPVRKLHGRGAVAHS*SPIHTH Trigger: GTGTGTATGTATGGGGGACAAAGAGTGGGCGACTGC...ACCTCTCCCATGTAGCTTACGCACAGGCCTAAGGTAACTAAGAAAGCAGCCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
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| CDS-3UTR CAA 90 bp | TCCCTGCTGCAGAGATCTGGTGGCTGCTTTCTTAGTTACCTTAGGCCTGTGCGTCCAGAGAATCCGAGGTaGGAGAGAAGTCACTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: SLLQRSGGCFLSYLRPVRPENPR*ERSHCS Trigger: AGAGCAGTGACTTCTCTCCAACCTCGGATTCTCTGG...ACGCACAGGCCTAAGGTAACTAAGAAAGCAGCCACCAGATCTCTGCAGCAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
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| CDS-3UTR CAA 90 bp | CGCAAATTCTTGCTGGATGACTTTATTGTTACCCTTGCCAGGTGGTGGCGCACTGCAGTCGCCCACTCTTaGTCCCCCATACATACACAC | + |
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Preference number: 5 (lower is better) Translates to: RKFLLDDFIVTLARWWRTAVAHS*SPIHTH Trigger: GTGTGTATGTATGGGGGACAAAGAGTGGGCGACTGC...AGTGCGCCACCACCTGGCAAGGGTAACAATAAAGTCATCCAGCAAGAATTTGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| CDS-3UTR CAA 90 bp | GGCCAGGTGACCACTTGCCTACAGCAGATAACAGCCTTGTTATGGAGTAGGATAGACCTCCCCGTGGTGTaGACCATAAAACCTCACTCT | + |
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Preference number: 5 (lower is better) Translates to: GQVTTCLQQITALLWSRIDLPVV*TIKPHS Trigger: AGAGTGAGGTTTTATGGTCAACACCACGGGGAGGTC...TATCCTACTCCATAACAAGGCTGTTATCTGCTGTAGGCAAGTGGTCACCTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112872.2 |
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| CDS-3UTR CAA 90 bp | CGCAAATTCTTGCTGGATGACTTTATTGTTACCCTTGCCAGGTGGTGGCGCACTCCAGAGAATCCGAGGTaGGAGAGAAGTCACTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: RKFLLDDFIVTLARWWRTPENPR*ERSHCS Trigger: AGAGCAGTGACTTCTCTCCAACCTCGGATTCTCTGG...AGTGCGCCACCACCTGGCAAGGGTAACAATAAAGTCATCCAGCAAGAATTTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039535.9 |
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| CDS TCA 90 bp | AAGAGCCAGATGCCAAGAGACCAGATGCTGAGTAACACAAACAACTaGTGTTGCCAGTGTGGCCCTCCAGATTGTGGTAGGACACAACTG | + |
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Preference number: 5 (lower is better) Translates to: KSQMPRDQMLSNTNN*CCQCGPPDCGRTQL Trigger: CAGTTGTGTCCTACCACAATCTGGAGGGCCACACTGGCAACATCAGTTGTTTGTGTTACTCAGCATCTGGTCTCTTGGCATCTGGCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
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| CDS TCA 90 bp | ACAGATGGTCTTGTCCCAAGAGCCAGATGCCAAGAGACCAGATGCTaGGTAACACAAACAACTGATGTTGCCAGTGTGGCCCTCCAGATT | + |
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Preference number: 5 (lower is better) Translates to: TDGLVPRARCQETRC*VTQTTDVASVALQI Trigger: AATCTGGAGGGCCACACTGGCAACATCAGTTGTTTGTGTTACTCAGCATCTGGTCTCTTGGCATCTGGCTCTTGGGACAAGACCATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
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| CDS CCA 72 bp | CACTTGGACCTTGCCACATCCCACAGGCGGATGCTGTaGTCACTGGAGGAGCTGGCAATGAGGCGGCCATCG | + |
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Preference number: 6 (lower is better) Translates to: HLDLATSHRRML*SLEELAMRRPS Trigger: CGATGGCCGCCTCATTGCCAGCTCCTCCAGTGACCACAGCATCCGCCTGTGGGATGTGGCAAGGTCCAAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
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| CDS TCA 72 bp | GCAGGGTCCGGCCGTCAGGAGAGAAGGCAGAGCAGTTaGCCTCCCCGTGGTGTTGACCATAAAACCTCACTC | + |
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Preference number: 6 (lower is better) Translates to: AGSGRQERRQSS*PPRGVDHKTSL Trigger: GAGTGAGGTTTTATGGTCAACACCACGGGGAGGTCAACTGCTCTGCCTTCTCTCCTGACGGCCGGACCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
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| CDS CAA 72 bp | CTGCGGCCAGACTGCACTTCCCAGACAATCGCTCTCTaGTCCCAACCACCTGATGCCAGCTGCTTGGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: LRPDCTSQTIAL*SQPPDASCLES Trigger: GGACTCCAAGCAGCTGGCATCAGGTGGTTGGGACAAGAGAGCGATTGTCTGGGAAGTGCAGTCTGGCCGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
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| CDS CAA 90 bp | CCACACTCCTCTGGTGACCTTTCAGCACATGTAGACACTTGGACCTaGCCACATCCCACAGGCGGATGCTGTGGTCACTGGAGGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PHSSGDLSAHVDTWT*PHPTGGCCGHWRSW Trigger: CCAGCTCCTCCAGTGACCACAGCATCCGCCTGTGGGATGTGGCAAGGTCCAAGTGTCTACATGTGCTGAAAGGTCACCAGAGGAGTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
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| CDS TCA 72 bp | ACAGGCGGATGCTGTGGTCACTGGAGGAGCTGGCAATaGGGCGGCCATCGGGAGAGAAACAGCAAGACTTCA | + |
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Preference number: 6 (lower is better) Translates to: TGGCCGHWRSWQ*GGHRERNSKTS Trigger: TGAAGTCTTGCTGTTTCTCTCCCGATGGCCGCCTCATTGCCAGCTCCTCCAGTGACCACAGCATCCGCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
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| CDS TCA 72 bp | CACTTCCCAGACAATCGCTCTCTTGTCCCAACCACCTaGTGCCAGCTGCTTGGAGTCCGGGCTGAAGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: HFPDNRSLVPTT*CQLLGVRAEAD Trigger: GTCAGCTTCAGCCCGGACTCCAAGCAGCTGGCATCAGGTGGTTGGGACAAGAGAGCGATTGTCTGGGAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
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| CDS GCA 72 bp | GACACAACTGGGGTGGATGCCCGCAAGTCCCATATGTaGACAGTCGAGTCCCAGGAACCAGTGGCCAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: DTTGVDARKSHM*TVESQEPVARE Trigger: TTCTCTGGCCACTGGTTCCTGGGACTCGACTGTGCACATATGGGACTTGCGGGCATCCACCCCAGTTGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
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| CDS GCA 72 bp | GTTGGAGAGAAGTCACTGCTCTGGATGGAATCACAATaGCCAACCAAGAGGTGCACCCTGCGGCCAGACTGC | + |
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Preference number: 6 (lower is better) Translates to: VGEKSLLWMESQ*PTKRCTLRPDC Trigger: GCAGTCTGGCCGCAGGGTGCACCTCTTGGTTGGGCATTGTGATTCCATCCAGAGCAGTGACTTCTCTCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
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| CDS CAA 72 bp | ATCGCTCTCTTGTCCCAACCACCTGATGCCAGCTGCTaGGAGTCCGGGCTGAAGCTGACAGTTTCCACACTC | + |
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Preference number: 6 (lower is better) Translates to: IALLSQPPDASC*ESGLKLTVSTL Trigger: GAGTGTGGAAACTGTCAGCTTCAGCCCGGACTCCAAGCAGCTGGCATCAGGTGGTTGGGACAAGAGAGCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
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| CDS GCA 72 bp | ACAATCGCTCTCTTGTCCCAACCACCTGATGCCAGCTaGTTGGAGTCCGGGCTGAAGCTGACAGTTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: TIALLSQPPDAS*LESGLKLTVST Trigger: TGTGGAAACTGTCAGCTTCAGCCCGGACTCCAAGCAGCTGGCATCAGGTGGTTGGGACAAGAGAGCGATTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
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| CDS CAA 72 bp | TGTGGCCTGCCAGTCTCCATAGCAGTCGCCCACTCTTaGTCCCCCATACATACACACAGCCATCATCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: CGLPVSIAVAHS*SPIHTHSHHLR Trigger: CCTCAGATGATGGCTGTGTGTATGTATGGGGGACAAAGAGTGGGCGACTGCTATGGAGACTGGCAGGCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
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| CDS CAA 72 bp | TCTGGTGACCTTTCAGCACATGTAGACACTTGGACCTaGCCACATCCCACAGGCGGATGCTGTGGTCACTGG | + |
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Preference number: 6 (lower is better) Translates to: SGDLSAHVDTWT*PHPTGGCCGHW Trigger: CCAGTGACCACAGCATCCGCCTGTGGGATGTGGCAAGGTCCAAGTGTCTACATGTGCTGAAAGGTCACCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
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| CDS TCA 72 bp | TCCGGGCTGAAGCTGACAGTTTCCACACTCCTCTGGTaGCCTTTCAGCACATGTAGACACTTGGACCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: SGLKLTVSTLLW*PFSTCRHLDLA Trigger: GGCAAGGTCCAAGTGTCTACATGTGCTGAAAGGTCACCAGAGGAGTGTGGAAACTGTCAGCTTCAGCCCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
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| CDS TCA 72 bp | CTTGTCCCAAGAGCCAGATGCCAAGAGACCAGATGCTaGGTAACACAAACAACTGATGTTGCCAGTGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: LVPRARCQETRC*VTQTTDVASVA Trigger: GGCCACACTGGCAACATCAGTTGTTTGTGTTACTCAGCATCTGGTCTCTTGGCATCTGGCTCTTGGGACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
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| CDS CAA 72 bp | AGGTTGTTGGTTGTAGGCTTCCAGACACAGATGGTCTaGTCCCAAGAGCCAGATGCCAAGAGACCAGATGCT | + |
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Preference number: 6 (lower is better) Translates to: RLLVVGFQTQMV*SQEPDAKRPDA Trigger: AGCATCTGGTCTCTTGGCATCTGGCTCTTGGGACAAGACCATCTGTGTCTGGAAGCCTACAACCAACAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
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| CDS TCA 72 bp | ATGCCAAGAGACCAGATGCTGAGTAACACAAACAACTaGTGTTGCCAGTGTGGCCCTCCAGATTGTGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: MPRDQMLSNTNN*CCQCGPPDCGR Trigger: CCTACCACAATCTGGAGGGCCACACTGGCAACATCAGTTGTTTGTGTTACTCAGCATCTGGTCTCTTGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
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| CDS TCA 72 bp | GCTAGACTATTCACCCAAATGGTATGGCCCTTGAGCTaGAGAGGCAGGTTGTTGGTTGTAGGCTTCCAGACA | + |
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Preference number: 6 (lower is better) Translates to: ARLFTQMVWPLS*RGRLLVVGFQT Trigger: TGTCTGGAAGCCTACAACCAACAACCTGCCTCTTCAGCTCAAGGGCCATACCATTTGGGTGAATAGTCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039535.9 ENSMUST00000112872.2 |
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