Pregenerated sensors for WDR36 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038299Ensembl transcript IDs: ENSMUST00000053663.11, ENSMUST00000166214.9
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTGTCAGAAAAGAACAGCCCTTGCTGGAGCCTGGGGTCTCCCTGTaGAGACACTTGCTGCACTTCTTCCTGGAGCAAGCACCTCTCACT | + |
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Preference number: 1 (lower is better) Translates to: TVRKEQPLLEPGVSL*RHLLHFFLEQAPLT Trigger: AGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGCAAGTGTCTGCACAGGGAGACCCCAGGCTCCAGCAAGGGCTGTTCTTTTCTGACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR GCA 90 bp | AACAGCCCTTGCTGGAGCCTGGGGTCTCCCTGTGCAGACACTTGCTaGACTTCTTCCTGGAGCAAGCACCTCTCACTTCCATCTAATGAA | + |
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Preference number: 1 (lower is better) Translates to: NSPCWSLGSPCADTC*TSSWSKHLSLPSNE Trigger: TTCATTAGATGGAAGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGCAAGTGTCTGCACAGGGAGACCCCAGGCTCCAGCAAGGGCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR CCA 90 bp | GATCCCAGCCAACCTTTCTTTGACTCCTCTATAACAAAGGGAGGGTaGGGGTGGGGCTGGACCAAAGGCACCAGACACAAACACAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: DPSQPFFDSSITKGG*GWGWTKGTRHKHSS Trigger: TGAGCTGTGTTTGTGTCTGGTGCCTTTGGTCCAGCCCCACCCCCACCCTCCCTTTGTTATAGAGGAGTCAAAGAAAGGTTGGCTGGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR CCA 90 bp | TCCCAAATAAACCACTGTCAGAAAAGAACAGCCCTTGCTGGAGCCTaGGGTCTCCCTGTGCAGACACTTGCTGCACTTCTTCCTGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: SQINHCQKRTALAGA*GLPVQTLAALLPGA Trigger: TGCTCCAGGAAGAAGTGCAGCAAGTGTCTGCACAGGGAGACCCCAGGCTCCAGCAAGGGCTGTTCTTTTCTGACAGTGGTTTATTTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR CCA 90 bp | AGCCAACCTTTCTTTGACTCCTCTATAACAAAGGGAGGGTGGGGGTaGGGCTGGACCAAAGGCACCAGACACAAACACAGCTCAAGAATC | + |
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Preference number: 1 (lower is better) Translates to: SQPFFDSSITKGGWG*GWTKGTRHKHSSRI Trigger: GATTCTTGAGCTGTGTTTGTGTCTGGTGCCTTTGGTCCAGCCCCACCCCCACCCTCCCTTTGTTATAGAGGAGTCAAAGAAAGGTTGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR CCA 90 bp | TGGAGCCTGGGGTCTCCCTGTGCAGACACTTGCTGCACTTCTTCCTaGAGCAAGCACCTCTCACTTCCATCTAATGAAACCTTATCTAGG | + |
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Preference number: 1 (lower is better) Translates to: WSLGSPCADTCCTSS*SKHLSLPSNETLSR Trigger: CCTAGATAAGGTTTCATTAGATGGAAGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGCAAGTGTCTGCACAGGGAGACCCCAGGCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR CCA 90 bp | AGTCTCTTCCCAAATAAACCACTGTCAGAAAAGAACAGCCCTTGCTaGAGCCTGGGGTCTCCCTGTGCAGACACTTGCTGCACTTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: SLFPNKPLSEKNSPC*SLGSPCADTCCTSS Trigger: GGAAGAAGTGCAGCAAGTGTCTGCACAGGGAGACCCCAGGCTCCAGCAAGGGCTGTTCTTTTCTGACAGTGGTTTATTTGGGAAGAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR CCA 90 bp | CCTTTCTTTGACTCCTCTATAACAAAGGGAGGGTGGGGGTGGGGCTaGACCAAAGGCACCAGACACAAACACAGCTCAAGAATCAACAAT | + |
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Preference number: 1 (lower is better) Translates to: PFFDSSITKGGWGWG*TKGTRHKHSSRINN Trigger: ATTGTTGATTCTTGAGCTGTGTTTGTGTCTGGTGCCTTTGGTCCAGCCCCACCCCCACCCTCCCTTTGTTATAGAGGAGTCAAAGAAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR-3UTR CCA 90 bp | ACAGACTGTTCTTTTCTGGAGTCTGTAAAACTCTCTAAGCTAATGTTGAGCAAGAAGGGAGGGTGGGGGTaGGGCTGGACCAAAGGCACC | + |
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Preference number: 2 (lower is better) Translates to: TDCSFLESVKLSKLMLSKKGGWG*GWTKGT Trigger: GGTGCCTTTGGTCCAGCCCCACCCCCACCCTCCCTT...CTTGCTCAACATTAGCTTAGAGAGTTTTACAGACTCCAGAAAAGAACAGTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR-3UTR CCA 90 bp | TTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCTGGTTTATAGCCCTTGCTGGAGCCTaGGGTCTCCCTGTGCAGACA | + |
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Preference number: 2 (lower is better) Translates to: FTSGVLKLQVLDHQAWFIALAGA*GLPVQT Trigger: TGTCTGCACAGGGAGACCCCAGGCTCCAGCAAGGGC...TATAAACCAGGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR-3UTR TCA 90 bp | CCTCTAGTCTTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCTGGTCACTCCCACTCTaGGCTGAGAGTGAAGACAAG | + |
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Preference number: 2 (lower is better) Translates to: PLVFTSGVLKLQVLDHQAWSLPL*AESEDK Trigger: CTTGTCTTCACTCTCAGCTCAGAGTGGGAGTGACCA...GGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAAGACTAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR-3UTR CCA 90 bp | TTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCTGGTTTATAAAGAACAGCCCTTGCTaGAGCCTGGGGTCTCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: FTSGVLKLQVLDHQAWFIKNSPC*SLGSPC Trigger: ACAGGGAGACCCCAGGCTCCAGCAAGGGCTGTTCTT...TATAAACCAGGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR-3UTR GCA 90 bp | TTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCTGGTTTATACCCTGTGCAGACACTTaGTGCACTTCTTCCTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: FTSGVLKLQVLDHQAWFIPCADT*CTSSWS Trigger: GCTCCAGGAAGAAGTGCAGCAAGTGTCTGCACAGGG...TATAAACCAGGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR-3UTR GCA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTCCTGGGGTCTCCCTGTaGAGACACTTGCTGCACTTC | + |
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Preference number: 2 (lower is better) Translates to: FIRPGLRLASSYYFQHLFPGVSL*RHLLHF Trigger: GAAGTGCAGCAAGTGTCTGCACAGGGAGACCCCAGG...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR-3UTR GCA 90 bp | ACAGACTGTTCTTTTCTGGAGTCTGTAAAACTCTCTAAGCTAATGTTGAGCAAGGAAAAGAACAGCCCTTaGTGGAGCCTGGGGTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: TDCSFLESVKLSKLMLSKEKNSP*WSLGSP Trigger: GGGAGACCCCAGGCTCCAGCAAGGGCTGTTCTTTTC...CTTGCTCAACATTAGCTTAGAGAGTTTTACAGACTCCAGAAAAGAACAGTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR-3UTR TCA 90 bp | GCTGCACTTCTTCCTGGAGCAAGCACCTCTCACTTCCATCTAATGAAACCTTATCAGCCAACCTTTCTTTaGCTCCTCTATAACAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: AALLPGASTSHFHLMKPYQPTFL*LLYNKG Trigger: CCCTTTGTTATAGAGGAGTCAAAGAAAGGTTGGCTG...ATAAGGTTTCATTAGATGGAAGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR-3UTR GCA 90 bp | TTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCTGGTTTATATGTGCAGACACTTGCTaGACTTCTTCCTGGAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: FTSGVLKLQVLDHQAWFICADTC*TSSWSK Trigger: CTTGCTCCAGGAAGAAGTGCAGCAAGTGTCTGCACA...TATAAACCAGGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR-3UTR CCA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTTGCTGCACTTCTTCCTaGAGCAAGCACCTCTCACTT | + |
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Preference number: 2 (lower is better) Translates to: FIRPGLRLASSYYFQHLFCCTSS*SKHLSL Trigger: AAGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGCA...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR CAA 90 bp | ACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTaGTCCTCTAGTCTTTACCTCTGGAGTACTGAAATTGCAGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: TWSQASLQLLFSASF*SSSLYLWSTEIAGF Trigger: AAAACCTGCAATTTCAGTACTCCAGAGGTAAAGACTAGAGGACAAAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR CAA 90 bp | ATTTGTGCTCTCTCCAGCCCCAACTGTTTAATATTAATTGCTGTTTaGCTAAAGCACTGGGCCATTAAGAAAGAAGATGATGACAAGCGT | + |
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Preference number: 2 (lower is better) Translates to: ICALSSPNCLILIAV*LKHWAIKKEDDDKR Trigger: ACGCTTGTCATCATCTTCTTTCTTAATGGCCCAGTGCTTTAGCAAAACAGCAATTAATATTAAACAGTTGGGGCTGGAGAGAGCACAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR-3UTR CCA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTACCTTATCTAGGAAGTaGGCAACTGAGAAAGCTCTA | + |
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Preference number: 2 (lower is better) Translates to: FIRPGLRLASSYYFQHLFTLSRK*ATEKAL Trigger: TAGAGCTTTCTCAGTTGCCCACTTCCTAGATAAGGT...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR TCA 72 bp | AAGCCAGGCCACCACAGATCCCAGCCAACCTTTCTTTaGCTCCTCTATAACAAAGGGAGGGTGGGGGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: KPGHHRSQPTFL*LLYNKGRVGVG Trigger: CCCCACCCCCACCCTCCCTTTGTTATAGAGGAGTCAAAGAAAGGTTGGCTGGGATCTGTGGTGGCCTGGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR CCA 72 bp | GGGTCTCCCTGTGCAGACACTTGCTGCACTTCTTCCTaGAGCAAGCACCTCTCACTTCCATCTAATGAAACC | + |
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Preference number: 3 (lower is better) Translates to: GSPCADTCCTSS*SKHLSLPSNET Trigger: GGTTTCATTAGATGGAAGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGCAAGTGTCTGCACAGGGAGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR-3UTR CAA 90 bp | CCTCTAGTCTTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCAGAAAAGAACAGCCCTaGCTGGAGCCTGGGGTCTCC | + |
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Preference number: 3 (lower is better) Translates to: PLVFTSGVLKLQVLDHQARKEQP*LEPGVS Trigger: GGAGACCCCAGGCTCCAGCAAGGGCTGTTCTTTTCT...GGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAAGACTAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR TCA 72 bp | TTATTTCTAGCCTTCCACCACATGGGTCCTGGGAATTaGACTCTGGCCTCTAGGCTTGATGGCAAGCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: LFLAFHHMGPGN*TLASRLDGKLL Trigger: GAGGAGCTTGCCATCAAGCCTAGAGGCCAGAGTTCAATTCCCAGGACCCATGTGGTGGAAGGCTAGAAATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR-3UTR CAA 90 bp | TTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCTGGTTTATATCCCTGTGCAGACACTaGCTGCACTTCTTCCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: FTSGVLKLQVLDHQAWFISLCRH*LHFFLE Trigger: CTCCAGGAAGAAGTGCAGCAAGTGTCTGCACAGGGA...TATAAACCAGGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR TCA 72 bp | TTGAACTTAAAATACACGAGCTGGTCACTCCCACTCTaGGCTGAGAGTGAAGACAAGTTAAACAGCACACTT | + |
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Preference number: 3 (lower is better) Translates to: LNLKYTSWSLPL*AESEDKLNSTL Trigger: AAGTGTGCTGTTTAACTTGTCTTCACTCTCAGCTCAGAGTGGGAGTGACCAGCTCGTGTATTTTAAGTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR GCA 72 bp | GTTTTAGACCACCAAGCCTGGTTTATACGGGATTTGTaGTCTCTCCAGCCCCAACTGTTTAATATTAATTGC | + |
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Preference number: 3 (lower is better) Translates to: VLDHQAWFIRDL*SLQPQLFNINC Trigger: GCAATTAATATTAAACAGTTGGGGCTGGAGAGAGCACAAATCCCGTATAAACCAGGCTTGGTGGTCTAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR-3UTR CAA 90 bp | GCTGCACTTCTTCCTGGAGCAAGCACCTCTCACTTCCATCTAATGAAACCTTATCATCTACAAAGGCTTTaGAACTTAAAATACACGAGC | + |
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Preference number: 3 (lower is better) Translates to: AALLPGASTSHFHLMKPYHLQRL*NLKYTS Trigger: GCTCGTGTATTTTAAGTTCAAAAGCCTTTGTAGATG...ATAAGGTTTCATTAGATGGAAGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR-3UTR CAA 90 bp | CCTCTAGTCTTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCATATTAATTGCTGTTTaGCTAAAGCACTGGGCCATT | + |
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Preference number: 3 (lower is better) Translates to: PLVFTSGVLKLQVLDHQAILIAV*LKHWAI Trigger: AATGGCCCAGTGCTTTAGCAAAACAGCAATTAATAT...GGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAAGACTAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR-3UTR CAA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTTCTGGAGTACTGAAATaGCAGGTTTTAGACCACCAA | + |
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Preference number: 3 (lower is better) Translates to: FIRPGLRLASSYYFQHLFSGVLK*QVLDHQ Trigger: TTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGA...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| 3UTR CCA 72 bp | AACTGTTTAATATTAATTGCTGTTTTGCTAAAGCACTaGGCCATTAAGAAAGAAGATGATGACAAGCGTAGT | + |
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Preference number: 3 (lower is better) Translates to: NCLILIAVLLKH*AIKKEDDDKRS Trigger: ACTACGCTTGTCATCATCTTCTTTCTTAATGGCCCAGTGCTTTAGCAAAACAGCAATTAATATTAAACAGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| CDS-3UTR TCA 90 bp | GCTGCACTTCTTCCTGGAGCAAGCACCTCTCACTTCCATCTAATGAAACCTTATGATGAAAAACGGAGCTaGCTGGGGAACCTTGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: AALLPGASTSHFHLMKPYDEKRS*LGNLGR Trigger: CCGCCCAAGGTTCCCCAGTCAGCTCCGTTTTTCATC...ATAAGGTTTCATTAGATGGAAGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| CDS-3UTR CCA 90 bp | GCTGCACTTCTTCCTGGAGCAAGCACCTCTCACTTCCATCTAATGAAACCTTATCGGGTACAGCAAACCTaGGGACAAGCCCAGGAACTG | + |
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Preference number: 4 (lower is better) Translates to: AALLPGASTSHFHLMKPYRVQQT*GQAQEL Trigger: CAGTTCCTGGGCTTGTCCCCAGGTTTGCTGTACCCG...ATAAGGTTTCATTAGATGGAAGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| CDS-3UTR TCA 90 bp | GCTGCACTTCTTCCTGGAGCAAGCACCTCTCACTTCCATCTAATGAAACCTTATCCATCCCAGTCACTTTaGCGAGCTTCCTCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: AALLPGASTSHFHLMKPYPSQSL*RASSAA Trigger: TGCTGCTGAGGAAGCTCGTCAAAGTGACTGGGATGG...ATAAGGTTTCATTAGATGGAAGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| CDS-3UTR GCA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTACAGCACGCTGGCCGTaGGGCCTTCCACAGCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: FIRPGLRLASSYYFQHLFTARWP*GLPQRS Trigger: AGAGCGCTGTGGAAGGCCGCACGGCCAGCGTGCTGT...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| CDS-3UTR CCA 90 bp | GCTGCACTTCTTCCTGGAGCAAGCACCTCTCACTTCCATCTAATGAAACCTTATAAAAACGGAGCTGACTaGGGAACCTTGGGCGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: AALLPGASTSHFHLMKPYKNGAD*GTLGGS Trigger: AGAGCCGCCCAAGGTTCCCCAGTCAGCTCCGTTTTT...ATAAGGTTTCATTAGATGGAAGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| CDS-3UTR TCA 90 bp | ACAGACTGTTCTTTTCTGGAGTCTGTAAAACTCTCTAAGCTAATGTTGAGCAAGGTGGAACCTCGTTGCTaGACAGCCCCAAGGCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: TDCSFLESVKLSKLMLSKVEPRC*TAPRPG Trigger: TCCGGGCCTTGGGGCTGTTCAGCAACGAGGTTCCAC...CTTGCTCAACATTAGCTTAGAGAGTTTTACAGACTCCAGAAAAGAACAGTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| CDS-3UTR GCA 90 bp | CCTCTAGTCTTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCTTTACCACCTTAGACTaGTGGGGGTCACTGCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: PLVFTSGVLKLQVLDHQAFTTLD*WGSLLG Trigger: ACCCAGCAGTGACCCCCAGCAGTCTAAGGTGGTAAA...GGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAAGACTAGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| CDS-3UTR TCA 90 bp | GCTGCACTTCTTCCTGGAGCAAGCACCTCTCACTTCCATCTAATGAAACCTTATCAAGACCGCTTCCCTTaGTGGCAAGCAATGATACCA | + |
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Preference number: 4 (lower is better) Translates to: AALLPGASTSHFHLMKPYQDRFP*WQAMIP Trigger: TGGTATCATTGCTTGCCATCAAGGGAAGCGGTCTTG...ATAAGGTTTCATTAGATGGAAGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| CDS-3UTR TCA 90 bp | CCTCTAGTCTTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCTTGGTAATTCCAGGTTaGGCAAGACCGCTTCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: PLVFTSGVLKLQVLDHQALVIPG*ARPLPL Trigger: CAAGGGAAGCGGTCTTGCTCAACCTGGAATTACCAA...GGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAAGACTAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| CDS-3UTR CCA 90 bp | TTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCTGGTTTATAACCACCTTAGACTGCTaGGGGTCACTGCTGGGTTCG | + |
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Preference number: 4 (lower is better) Translates to: FTSGVLKLQVLDHQAWFITTLDC*GSLLGS Trigger: CGAACCCAGCAGTGACCCCCAGCAGTCTAAGGTGGT...TATAAACCAGGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| CDS-3UTR TCA 90 bp | GCTGCACTTCTTCCTGGAGCAAGCACCTCTCACTTCCATCTAATGAAACCTTATTCCACTGAGATAACGTaGTCCCCAAAGGGTTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: AALLPGASTSHFHLMKPYSTEIT*SPKGCK Trigger: TTTGCAACCCTTTGGGGATCACGTTATCTCAGTGGA...ATAAGGTTTCATTAGATGGAAGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| CDS-3UTR CCA 90 bp | CCTCTAGTCTTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCAGCAACGGCTCTCTATaGAGAAATGTCAGCCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: PLVFTSGVLKLQVLDHQASNGSL*RNVSPD Trigger: ATCTGGGCTGACATTTCTCCATAGAGAGCCGTTGCT...GGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAAGACTAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| CDS-3UTR TCA 90 bp | GCTGCACTTCTTCCTGGAGCAAGCACCTCTCACTTCCATCTAATGAAACCTTATACCATCTGTGCGAAATaGAATGGAAGTAATGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: AALLPGASTSHFHLMKPYTICAK*NGSNGS Trigger: GGACCCATTACTTCCATTTCATTTCGCACAGATGGT...ATAAGGTTTCATTAGATGGAAGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| CDS-3UTR TCA 90 bp | CCTCTAGTCTTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCTCGCAGGGAGACAACTaGATAGAGGGAAATATTCGA | + |
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Preference number: 4 (lower is better) Translates to: PLVFTSGVLKLQVLDHQASQGDN*IEGNIR Trigger: TCGAATATTTCCCTCTATTCAGTTGTCTCCCTGCGA...GGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAAGACTAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
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| CDS-3UTR TCA 90 bp | TTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCTGGTTTATAAAGGTTTTTCCAGCGTaGCTCAGGGAGAAGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FTSGVLKLQVLDHQAWFIKVFPA*LREKGE Trigger: CTCTCCCTTCTCCCTGAGTCACGCTGGAAAAACCTT...TATAAACCAGGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CCA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTGTACCGCACCACGTGTaGAACCTCGTTGCTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: FIRPGLRLASSYYFQHLFVPHHV*NLVAEQ Trigger: CTGTTCAGCAACGAGGTTCCACACGTGGTGCGGTAC...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CCA 90 bp | GCTGCACTTCTTCCTGGAGCAAGCACCTCTCACTTCCATCTAATGAAACCTTATTCCAGCTGCCATTATTaGATGACCATCTGTGCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AALLPGASTSHFHLMKPYSSCHY*MTICAK Trigger: TTTCGCACAGATGGTCATCCAATAATGGCAGCTGGA...ATAAGGTTTCATTAGATGGAAGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CCA 90 bp | CCTCTAGTCTTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCCAGGAAGCATCACTATaGAAGGGACATAATCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLVFTSGVLKLQVLDHQAQEASL*KGHNLE Trigger: CTCCAGATTATGTCCCTTCCATAGTGATGCTTCCTG...GGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAAGACTAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR TCA 90 bp | ACAGACTGTTCTTTTCTGGAGTCTGTAAAACTCTCTAAGCTAATGTTGAGCAAGAGGTGGGAGCCTTACTaGCATGGTGTTCTGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TDCSFLESVKLSKLMLSKRWEPY*HGVLKS Trigger: GGACTTCAGAACACCATGTCAGTAAGGCTCCCACCT...CTTGCTCAACATTAGCTTAGAGAGTTTTACAGACTCCAGAAAAGAACAGTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR TCA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTCAGGAACTGTTGGGATaGAAAACGGAGCTGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FIRPGLRLASSYYFQHLFQELLG*KTELTG Trigger: CCCAGTCAGCTCCGTTTTTCATCCCAACAGTTCCTG...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR GCA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTAACTGTAGGCTTCCCTaGTCACTGCCCAGTAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: FIRPGLRLASSYYFQHLFNCRLP*SLPSRT Trigger: AGTCCTACTGGGCAGTGAGCAGGGAAGCCTACAGTT...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CCA 90 bp | GCTGCACTTCTTCCTGGAGCAAGCACCTCTCACTTCCATCTAATGAAACCTTATTCATTTATTTGGCCGTaGTGTCCAGAAAACTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AALLPGASTSHFHLMKPYSFIWP*CPENSL Trigger: CAGAGAGTTTTCTGGACACCACGGCCAAATAAATGA...ATAAGGTTTCATTAGATGGAAGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CCA 90 bp | ACAGACTGTTCTTTTCTGGAGTCTGTAAAACTCTCTAAGCTAATGTTGAGCAAGGGAAGGGACATAATCTaGAGGAAGTGGTCGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TDCSFLESVKLSKLMLSKGRDII*RKWSQG Trigger: TCCCTGCGACCACTTCCTCCAGATTATGTCCCTTCC...CTTGCTCAACATTAGCTTAGAGAGTTTTACAGACTCCAGAAAAGAACAGTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CCA 90 bp | GCTGCACTTCTTCCTGGAGCAAGCACCTCTCACTTCCATCTAATGAAACCTTATCTCACTCAACTGTTCTaGCGACTCATACTCTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: AALLPGASTSHFHLMKPYLTQLF*RLILYH Trigger: ATGATAGAGTATGAGTCGCCAGAACAGTTGAGTGAG...ATAAGGTTTCATTAGATGGAAGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR GCA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTTCCCATCGGCTGCCATaGAACAGATATCCTGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FIRPGLRLASSYYFQHLFSHRLP*NRYPVE Trigger: TTCCACAGGATATCTGTTGCATGGCAGCCGATGGGA...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR GCA 90 bp | ACAGACTGTTCTTTTCTGGAGTCTGTAAAACTCTCTAAGCTAATGTTGAGCAAGACACGGGCTTCCAGCTaGCATTATTGGATGACCATC | + |
|
Preference number: 4 (lower is better) Translates to: TDCSFLESVKLSKLMLSKTRASS*HYWMTI Trigger: GATGGTCATCCAATAATGGCAGCTGGAAGCCCGTGT...CTTGCTCAACATTAGCTTAGAGAGTTTTACAGACTCCAGAAAAGAACAGTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR GCA 90 bp | ACAGACTGTTCTTTTCTGGAGTCTGTAAAACTCTCTAAGCTAATGTTGAGCAAGGAGAGAGTCACCAGTTaGTCACTCAACTGTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TDCSFLESVKLSKLMLSKERVTS*SLNCSG Trigger: GCCAGAACAGTTGAGTGAGCAACTGGTGACTCTCTC...CTTGCTCAACATTAGCTTAGAGAGTTTTACAGACTCCAGAAAAGAACAGTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CCA 90 bp | TTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCTGGTTTATAGGAGCCTTACTGACATaGTGTTCTGAAGTCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FTSGVLKLQVLDHQAWFIGALLT*CSEVLS Trigger: GGAAAGGACTTCAGAACACCATGTCAGTAAGGCTCC...TATAAACCAGGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CCA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTGCTGTAACCACCAGCTaGTTTAATCCATCCACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FIRPGLRLASSYYFQHLFAVTTS*FNPSTA Trigger: TGCCGTGGATGGATTAAACCAGCTGGTGGTTACAGC...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CCA 90 bp | CCTCTAGTCTTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCTCAAGGCCCAGAGAGTaGATCAAAACTTTGCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PLVFTSGVLKLQVLDHQASRPRE*IKTLLL Trigger: TAAAAGCAAAGTTTTGATCCACTCTCTGGGCCTTGA...GGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAAGACTAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CCA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTAATGCAAGGTATGCCTaGGCCAACTCGAAATCACGC | + |
|
Preference number: 4 (lower is better) Translates to: FIRPGLRLASSYYFQHLFNARYA*ANSKSR Trigger: GCGTGATTTCGAGTTGGCCCAGGCATACCTTGCATT...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| 3UTR CAA 72 bp | CAGGTTTTAGACCACCAAGCCTGGTTTATACGGGATTaGTGCTCTCTCCAGCCCCAACTGTTTAATATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: QVLDHQAWFIRD*CSLQPQLFNIN Trigger: ATTAATATTAAACAGTTGGGGCTGGAGAGAGCACAAATCCCGTATAAACCAGGCTTGGTGGTCTAAAACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| 3UTR CAA 72 bp | TTTTGTCCTCTAGTCTTTACCTCTGGAGTACTGAAATaGCAGGTTTTAGACCACCAAGCCTGGTTTATACGG | + |
|
Preference number: 4 (lower is better) Translates to: FCPLVFTSGVLK*QVLDHQAWFIR Trigger: CCGTATAAACCAGGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAAGACTAGAGGACAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR TCA 90 bp | GCTGCACTTCTTCCTGGAGCAAGCACCTCTCACTTCCATCTAATGAAACCTTATTTGTTTACTAATCCATaGCCCAAGCTCTTGTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AALLPGASTSHFHLMKPYLFTNP*PKLLLN Trigger: ATTCAACAAGAGCTTGGGTCATGGATTAGTAAACAA...ATAAGGTTTCATTAGATGGAAGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR TCA 90 bp | TTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCTGGTTTATACTTGATGGCAAGCAATaGTACCATCCCAGTCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: FTSGVLKLQVLDHQAWFILDGKQ*YHPSHF Trigger: AAAGTGACTGGGATGGTATCATTGCTTGCCATCAAG...TATAAACCAGGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR TCA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTCACATCTACAGCTCCTaGAGAGAGGCCAATTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: FIRPGLRLASSYYFQHLFHIYSS*REANYC Trigger: GCAATAATTGGCCTCTCTTCAGGAGCTGTAGATGTG...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR TCA 90 bp | ACAGACTGTTCTTTTCTGGAGTCTGTAAAACTCTCTAAGCTAATGTTGAGCAAGTCCATACCTTGGGTTTaGCAAGTACCAGGAAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: TDCSFLESVKLSKLMLSKSIPWV*QVPGSI Trigger: GATGCTTCCTGGTACTTGTCAAACCCAAGGTATGGA...CTTGCTCAACATTAGCTTAGAGAGTTTTACAGACTCCAGAAAAGAACAGTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR TCA 90 bp | ACAGACTGTTCTTTTCTGGAGTCTGTAAAACTCTCTAAGCTAATGTTGAGCAAGATGGGTCCCCAGTCCTaGTGGAACTTCATTAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: TDCSFLESVKLSKLMLSKMGPQS*WNFINV Trigger: AACATTAATGAAGTTCCATCAGGACTGGGGACCCAT...CTTGCTCAACATTAGCTTAGAGAGTTTTACAGACTCCAGAAAAGAACAGTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR TCA 90 bp | TTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCTGGTTTATAACTGACATGGTGTTCTaGAGTCCTTTCCGTTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: FTSGVLKLQVLDHQAWFITDMVF*SPFRLT Trigger: AGTTAAACGGAAAGGACTTCAGAACACCATGTCAGT...TATAAACCAGGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR TCA 90 bp | TTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCTGGTTTATATTACACCTCTGGGCTTaGGAAAATAAGCACCTATTG | + |
|
Preference number: 4 (lower is better) Translates to: FTSGVLKLQVLDHQAWFILHLWA*ENKHLL Trigger: CAATAGGTGCTTATTTTCTCAAGCCCAGAGGTGTAA...TATAAACCAGGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR GCA 90 bp | ACAGACTGTTCTTTTCTGGAGTCTGTAAAACTCTCTAAGCTAATGTTGAGCAAGAAACAATGCAAGGTATaGCTGGGCCAACTCGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: TDCSFLESVKLSKLMLSKKQCKV*LGQLEI Trigger: GATTTCGAGTTGGCCCAGGCATACCTTGCATTGTTT...CTTGCTCAACATTAGCTTAGAGAGTTTTACAGACTCCAGAAAAGAACAGTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CCA 90 bp | GCTGCACTTCTTCCTGGAGCAAGCACCTCTCACTTCCATCTAATGAAACCTTATTATCATTTCATCACTTaGCTCAGTCTTTTCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AALLPGASTSHFHLMKPYYHFIT*LSLFFQ Trigger: TTGGAAGAAAAGACTGAGCCAAGTGATGAAATGATA...ATAAGGTTTCATTAGATGGAAGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR TCA 90 bp | ACAGACTGTTCTTTTCTGGAGTCTGTAAAACTCTCTAAGCTAATGTTGAGCAAGCTACTGCTGTTGCAGTaGGGTTGCTATTTGTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TDCSFLESVKLSKLMLSKLLLLQ*GCYLSL Trigger: TAAAGACAAATAGCAACCTCACTGCAACAGCAGTAG...CTTGCTCAACATTAGCTTAGAGAGTTTTACAGACTCCAGAAAAGAACAGTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR TCA 90 bp | ACAGACTGTTCTTTTCTGGAGTCTGTAAAACTCTCTAAGCTAATGTTGAGCAAGAAGAGGGACTGTAAGTaGGTCCAATCTTTTTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: TDCSFLESVKLSKLMLSKKRDCK*VQSFST Trigger: GGTAGAAAAAGATTGGACTCACTTACAGTCCCTCTT...CTTGCTCAACATTAGCTTAGAGAGTTTTACAGACTCCAGAAAAGAACAGTCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR GCA 90 bp | TTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCTGGTTTATATTTATTCCGGGCAAATaGAGAGAAAACGTTCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: FTSGVLKLQVLDHQAWFIFIPGK*RENVPI Trigger: TATGGGAACGTTTTCTCTGCATTTGCCCGGAATAAA...TATAAACCAGGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR GCA 90 bp | ACAGACTGTTCTTTTCTGGAGTCTGTAAAACTCTCTAAGCTAATGTTGAGCAAGTGTCAGCCCAGATATTaGTGTAGAGTGTGCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TDCSFLESVKLSKLMLSKCQPRY*CRVCIS Trigger: AGAAATGCACACTCTACAGCAATATCTGGGCTGACA...CTTGCTCAACATTAGCTTAGAGAGTTTTACAGACTCCAGAAAAGAACAGTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR GCA 90 bp | ACAGACTGTTCTTTTCTGGAGTCTGTAAAACTCTCTAAGCTAATGTTGAGCAAGGTAAGAGAAGCACTATaGCCCATTCTGAATCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TDCSFLESVKLSKLMLSKVREAL*PILNLN Trigger: GTTGAGATTCAGAATGGGGCATAGTGCTTCTCTTAC...CTTGCTCAACATTAGCTTAGAGAGTTTTACAGACTCCAGAAAAGAACAGTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR GCA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTGGAAGTTATATCTACTaGTGTTGCAGTGAGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FIRPGLRLASSYYFQHLFGSYIY*CCSEVA Trigger: AGCAACCTCACTGCAACAGCAGTAGATATAACTTCC...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CCA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTGCAACAGATATCCTGTaGAACAGAGTTACTTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: FIRPGLRLASSYYFQHLFATDIL*NRVTYC Trigger: GCAGTAAGTAACTCTGTTCCACAGGATATCTGTTGC...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CCA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTTGTTTCAATCCCAGATaGGCCCAATTCTTTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FIRPGLRLASSYYFQHLFCFNPR*AQFFQK Trigger: CTTCTGAAAGAATTGGGCCCATCTGGGATTGAAACA...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR GCA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTAGAGAGGCCAATTATTaGAAAGTTTCCACAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FIRPGLRLASSYYFQHLFREANY*KVSTGS Trigger: ACTTCCTGTGGAAACTTTGCAATAATTGGCCTCTCT...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR TCA 90 bp | ACAGACTGTTCTTTTCTGGAGTCTGTAAAACTCTCTAAGCTAATGTTGAGCAAGTTTCAGGTAGAAATTTaGCTTTTGAGCCAAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: TDCSFLESVKLSKLMLSKFQVEI*LLSQNP Trigger: GGGATTTTGGCTCAAAAGTCAAATTTCTACCTGAAA...CTTGCTCAACATTAGCTTAGAGAGTTTTACAGACTCCAGAAAAGAACAGTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR GCA 90 bp | ACAGACTGTTCTTTTCTGGAGTCTGTAAAACTCTCTAAGCTAATGTTGAGCAAGCAAAAGATGTATTTCTaGCTTATGGCCCTTAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TDCSFLESVKLSKLMLSKQKMYF*LMALKS Trigger: ACTTTTAAGGGCCATAAGGCAGAAATACATCTTTTG...CTTGCTCAACATTAGCTTAGAGAGTTTTACAGACTCCAGAAAAGAACAGTCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CCA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTTGTATTTCTGCCTTATaGCCCTTAAAAGTATGTACT | + |
|
Preference number: 4 (lower is better) Translates to: FIRPGLRLASSYYFQHLFCISAL*PLKVCT Trigger: AGTACATACTTTTAAGGGCCATAAGGCAGAAATACA...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS CCA 90 bp | CGTCACGTAGAAGCGGCGCTTGAGCGCGCTGTACCGCACCACGTGTaGAACCTCGTTGCTGAACAGCCCCAAGGCCCGGAACCCCGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: RHVEAALERAVPHHV*NLVAEQPQGPEPRE Trigger: TTCGCGGGGTTCCGGGCCTTGGGGCTGTTCAGCAACGAGGTTCCACACGTGGTGCGGTACAGCGCGCTCAAGCGCCGCTTCTACGTGACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS TCA 90 bp | GGTAATTCCAGGTTGAGCAAGACCGCTTCCCTTGATGGCAAGCAATaGTACCATCCCAGTCACTTTGACGAGCTTCCTCAGCAGCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: GNSRLSKTASLDGKQ*YHPSHFDELPQQQT Trigger: AGTTTGCTGCTGAGGAAGCTCGTCAAAGTGACTGGGATGGTATCATTGCTTGCCATCAAGGGAAGCGGTCTTGCTCAACCTGGAATTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS TCA 90 bp | GCTTTCTGTCCAACATCATTCCAATCATGCTTAAAAAGCTCCGCATaGCTTCTACCGACCCACCGTCATCAGGGGACAGGTTTCGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AFCPTSFQSCLKSSA*LLPTHRHQGTGFAA Trigger: AGCTGCGAAACCTGTCCCCTGATGACGGTGGGTCGGTAGAAGTCATGCGGAGCTTTTTAAGCATGATTGGAATGATGTTGGACAGAAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS TCA 90 bp | ACTTCACCAGCTCCTCTAAAAGCGCTGGCTCCGAAGGAAGCGTTCTaGGGTGTAACTTCAAAAACAATGCAAGGTATGCCTGGGCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: TSPAPLKALAPKEAF*GVTSKTMQGMPGPT Trigger: AGTTGGCCCAGGCATACCTTGCATTGTTTTTGAAGTTACACCTCAGAACGCTTCCTTCGGAGCCAGCGCTTTTAGAGGAGCTGGTGAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS GCA 90 bp | AAACGTTCCCATATGCAGCGAAGACTAGCCTCCCATCGGCTGCCATaGAACAGATATCCTGTGGAACAGAGTTACTTACTGCAACCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KRSHMQRRLASHRLP*NRYPVEQSYLLQPD Trigger: GTCTGGTTGCAGTAAGTAACTCTGTTCCACAGGATATCTGTTGCATGGCAGCCGATGGGAGGCTAGTCTTCGCTGCATATGGGAACGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS-3UTR CAA 90 bp | GCTGCACTTCTTCCTGGAGCAAGCACCTCTCACTTCCATCTAATGAAACCTTATCACAGCTGGTGCCTGTaGAAGAGCTGTCACTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: AALLPGASTSHFHLMKPYHSWCL*KSCHSN Trigger: GTTGGAGTGACAGCTCTTCAACAGGCACCAGCTGTG...ATAAGGTTTCATTAGATGGAAGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS CCA 90 bp | AACCAGCGGCCATCAGGACTGAACGTCATGTCATTTATTTGGCCGTaGTGTCCAGAAAACTCTCTGACGATCTTCCTAGTCTCTATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: NQRPSGLNVMSFIWP*CPENSLTIFLVSMS Trigger: CGACATAGAGACTAGGAAGATCGTCAGAGAGTTTTCTGGACACCACGGCCAAATAAATGACATGACGTTCAGTCCTGATGGCCGCTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS CCA 90 bp | AGTCTTCCATACCTTGGGTTTGACAAGTACCAGGAAGCATCACTATaGAAGGGACATAATCTGGAGGAAGTGGTCGCAGGGAGACAACTG | + |
|
Preference number: 5 (lower is better) Translates to: SLPYLGFDKYQEASL*KGHNLEEVVAGRQL Trigger: CAGTTGTCTCCCTGCGACCACTTCCTCCAGATTATGTCCCTTCCATAGTGATGCTTCCTGGTACTTGTCAAACCCAAGGTATGGAAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS-3UTR CAA 90 bp | GCTGCACTTCTTCCTGGAGCAAGCACCTCTCACTTCCATCTAATGAAACCTTATGCAAGACCGCTTCCCTaGATGGCAAGCAATGATACC | + |
|
Preference number: 5 (lower is better) Translates to: AALLPGASTSHFHLMKPYARPLP*MASNDT Trigger: GGTATCATTGCTTGCCATCAAGGGAAGCGGTCTTGC...ATAAGGTTTCATTAGATGGAAGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CAA 90 bp | GCTGCACTTCTTCCTGGAGCAAGCACCTCTCACTTCCATCTAATGAAACCTTATGGAGAGAGTCACCAGTaGCTCACTCAACTGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AALLPGASTSHFHLMKPYGESHQ*LTQLFW Trigger: CCAGAACAGTTGAGTGAGCAACTGGTGACTCTCTCC...ATAAGGTTTCATTAGATGGAAGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS GCA 90 bp | AGGTTTTTCCAGCGTGACTCAGGGAGAAGGGAGAGAGTCACCAGTTaGTCACTCAACTGTTCTGGCGACTCATACTCTATCATTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: RFFQRDSGRRERVTS*SLNCSGDSYSIISS Trigger: TGATGAAATGATAGAGTATGAGTCGCCAGAACAGTTGAGTGAGCAACTGGTGACTCTCTCCCTTCTCCCTGAGTCACGCTGGAAAAACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS CCA 90 bp | CTTATCAACCAGCGGCCATCAGGACTGAACGTCATGTCATTTATTTaGCCGTGGTGTCCAGAAAACTCTCTGACGATCTTCCTAGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LINQRPSGLNVMSFI*PWCPENSLTIFLVS Trigger: AGAGACTAGGAAGATCGTCAGAGAGTTTTCTGGACACCACGGCCAAATAAATGACATGACGTTCAGTCCTGATGGCCGCTGGTTGATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS CCA 90 bp | ACCGTCATCAGGGGACAGGTTTCGCAGCTCTGTTTCAATCCCAGATaGGCCCAATTCTTTCAGAAGGTTAAGAGCAGCTTCATACTGATT | + |
|
Preference number: 5 (lower is better) Translates to: TVIRGQVSQLCFNPR*AQFFQKVKSSFILI Trigger: AATCAGTATGAAGCTGCTCTTAACCTTCTGAAAGAATTGGGCCCATCTGGGATTGAAACAGAGCTGCGAAACCTGTCCCCTGATGACGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTAGTCTTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCCAAGTCTTCCATACCTaGGGTTTGACAAGTACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PLVFTSGVLKLQVLDHQAQVFHT*GLTSTR Trigger: CCTGGTACTTGTCAAACCCAAGGTATGGAAGACTTG...GGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAAGACTAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CAA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTTATGTGTGGAAGCTCTaGCCCACGCAAGTCGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: FIRPGLRLASSYYFQHLFYVWKL*PTQVVT Trigger: CGTGACGACTTGCGTGGGCAAGAGCTTCCACACATA...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS TCA 90 bp | ACGAGCTTCCTCAGCAGCAAACTGTGTGATAGGTGGGAGCCTTACTaGCATGGTGTTCTGAAGTCCTTTCCGTTTAACTATCTTTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TSFLSSKLCDRWEPY*HGVLKSFPFNYLFV Trigger: AACAAAAAGATAGTTAAACGGAAAGGACTTCAGAACACCATGTCAGTAAGGCTCCCACCTATCACACAGTTTGCTGCTGAGGAAGCTCGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS TCA 90 bp | CTTGAGAAAATAAGCACCTATTGTAGACCTTTGGTAATTCCAGGTTaGGCAAGACCGCTTCCCTTGATGGCAAGCAATGATACCATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LEKISTYCRPLVIPG*ARPLPLMASNDTIP Trigger: TGGGATGGTATCATTGCTTGCCATCAAGGGAAGCGGTCTTGCTCAACCTGGAATTACCAAAGGTCTACAATAGGTGCTTATTTTCTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS CCA 90 bp | CTAAGAGCATTATCAGCGCCATTTGTAACAAGCAACGGCTCTCTATaGAGAAATGTCAGCCCAGATATTGCTGTAGAGTGTGCATTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LRALSAPFVTSNGSL*RNVSPDIAVECAFL Trigger: GAGAAATGCACACTCTACAGCAATATCTGGGCTGACATTTCTCCATAGAGAGCCGTTGCTTGTTACAAATGGCGCTGATAATGCTCTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS TCA 90 bp | ATGTGCCAAATAATAAGAACGCTGTCAGTATCCACTGAGATAACGTaGTCCCCAAAGGGTTGCAAAAGATGTATTTCTGCCTTATGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: MCQIIRTLSVSTEIT*SPKGCKRCISALWP Trigger: GGGCCATAAGGCAGAAATACATCTTTTGCAACCCTTTGGGGATCACGTTATCTCAGTGGATACTGACAGCGTTCTTATTATTTGGCACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS CCA 90 bp | CTCACTCAACTGTTCTGGCGACTCATACTCTATCATTTCATCACTTaGCTCAGTCTTTTCTTCCAAGTCTTCCATACCTTGGGTTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LTQLFWRLILYHFIT*LSLFFQVFHTLGLT Trigger: TGTCAAACCCAAGGTATGGAAGACTTGGAAGAAAAGACTGAGCCAAGTGATGAAATGATAGAGTATGAGTCGCCAGAACAGTTGAGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS GCA 90 bp | AGAGAGGCCAATTATTGCAAAGTTTCCACAGGAAGTTATATCTACTaGTGTTGCAGTGAGGTTGCTATTTGTCTTTACACCTCTGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: REANYCKVSTGSYIY*CCSEVAICLYTSGL Trigger: AAGCCCAGAGGTGTAAAGACAAATAGCAACCTCACTGCAACAGCAGTAGATATAACTTCCTGTGGAAACTTTGCAATAATTGGCCTCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS-3UTR CAA 90 bp | ACAGACTGTTCTTTTCTGGAGTCTGTAAAACTCTCTAAGCTAATGTTGAGCAAGTTCCAGCTGCCATTATaGGATGACCATCTGTGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: TDCSFLESVKLSKLMLSKFQLPL*DDHLCE Trigger: TTCGCACAGATGGTCATCCAATAATGGCAGCTGGAA...CTTGCTCAACATTAGCTTAGAGAGTTTTACAGACTCCAGAAAAGAACAGTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CAA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTTTTGGTAATTCCAGGTaGAGCAAGACCGCTTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: FIRPGLRLASSYYFQHLFFGNSR*SKTASL Trigger: AAGGGAAGCGGTCTTGCTCAACCTGGAATTACCAAA...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 42% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CAA 90 bp | ACAGACTGTTCTTTTCTGGAGTCTGTAAAACTCTCTAAGCTAATGTTGAGCAAGGATCCACATGGGAAGTaGCTAGAAAGTCTCCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TDCSFLESVKLSKLMLSKDPHGK*LESLQL Trigger: CAACTGGAGACTTTCTAGCAACTTCCCATGTGGATC...CTTGCTCAACATTAGCTTAGAGAGTTTTACAGACTCCAGAAAAGAACAGTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CAA 90 bp | TTTACCTCTGGAGTACTGAAATTGCAGGTTTTAGACCACCAAGCCTGGTTTATAACCTTGGGCGGCTCTTaGGGTTTATTCTTTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FTSGVLKLQVLDHQAWFITLGGS*GLFFFL Trigger: CAAGAAAAAGAATAAACCCAAAGAGCCGCCCAAGGT...TATAAACCAGGCTTGGTGGTCTAAAACCTGCAATTTCAGTACTCCAGAGGTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CAA 90 bp | GCTGCACTTCTTCCTGGAGCAAGCACCTCTCACTTCCATCTAATGAAACCTTATGTTTCAGGTAGAAATTaGACTTTTGAGCCAAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: AALLPGASTSHFHLMKPYVSGRN*TFEPKS Trigger: GGATTTTGGCTCAAAAGTCAAATTTCTACCTGAAAC...ATAAGGTTTCATTAGATGGAAGTGAGAGGTGCTTGCTCCAGGAAGAAGTGCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS TCA 90 bp | TCCTCGATGTATACCAGACTGCATGTTATACACATCTACAGCTCCTaGAGAGAGGCCAATTATTGCAAAGTTTCCACAGGAAGTTATATC | + |
|
Preference number: 5 (lower is better) Translates to: SSMYTRLHVIHIYSS*REANYCKVSTGSYI Trigger: GATATAACTTCCTGTGGAAACTTTGCAATAATTGGCCTCTCTTCAGGAGCTGTAGATGTGTATAACATGCAGTCTGGTATACATCGAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS GCA 90 bp | GCTTATTGGACTTTATATTCCATAACTGTAGGCTTCCCTGCTCACTaGCCAGTAGGACTTTATTCAAATAGGTGCTTGGATGCAAAATTG | + |
|
Preference number: 5 (lower is better) Translates to: AYWTLYSITVGFPAH*PVGLYSNRCLDAKL Trigger: CAATTTTGCATCCAAGCACCTATTTGAATAAAGTCCTACTGGGCAGTGAGCAGGGAAGCCTACAGTTATGGAATATAAAGTCCAATAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS GCA 90 bp | GCCAATTATTGCAAAGTTTCCACAGGAAGTTATATCTACTGCTGTTaGAGTGAGGTTGCTATTTGTCTTTACACCTCTGGGCTTGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ANYCKVSTGSYIYCC*SEVAICLYTSGLEK Trigger: TTTCTCAAGCCCAGAGGTGTAAAGACAAATAGCAACCTCACTGCAACAGCAGTAGATATAACTTCCTGTGGAAACTTTGCAATAATTGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS-3UTR CAA 90 bp | ACAGACTGTTCTTTTCTGGAGTCTGTAAAACTCTCTAAGCTAATGTTGAGCAAGGTGATCCCCAAAGGGTaGCAAAAGATGTATTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TDCSFLESVKLSKLMLSKVIPKG*QKMYFC Trigger: GCAGAAATACATCTTTTGCAACCCTTTGGGGATCAC...CTTGCTCAACATTAGCTTAGAGAGTTTTACAGACTCCAGAAAAGAACAGTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CAA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTTTCCATACCTTGGGTTaGACAAGTACCAGGAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: FIRPGLRLASSYYFQHLFFHTLG*TSTRKH Trigger: ATGCTTCCTGGTACTTGTCAAACCCAAGGTATGGAA...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CAA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTGTTGTGAATGACAACTaGACCAGACACAAGACCAAT | + |
|
Preference number: 5 (lower is better) Translates to: FIRPGLRLASSYYFQHLFVVNDN*TRHKTN Trigger: ATTGGTCTTGTGTCTGGTCAAGTTGTCATTCACAAC...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CAA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTAAGAGAGGCCAATTATaGCAAAGTTTCCACAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FIRPGLRLASSYYFQHLFKRGQL*QSFHRK Trigger: CTTCCTGTGGAAACTTTGCAATAATTGGCCTCTCTT...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS-3UTR CAA 90 bp | TTTATTAGACCTGGTCTCAGGCTAGCCTCCAGCTATTATTTTCAGCATCTTTTTTTAAAGTTCCAGAATTaGAGTAACCGTTCACTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FIRPGLRLASSYYFQHLFLKFQN*SNRSLP Trigger: TGGAAGTGAACGGTTACTCAAATTCTGGAACTTTAA...AAAAAGATGCTGAAAATAATAGCTGGAGGCTAGCCTGAGACCAGGTCTAATAAA 38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000053663.11 |
||
| CDS CCA 72 bp | ACAGCCCCAAGGCCCGGAACCCCGCGAACAGCACGCTaGCCGTGCGGCCTTCCACAGCGCTCTCCATCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: TAPRPGTPRTAR*PCGLPQRSPSP Trigger: CGGAGATGGAGAGCGCTGTGGAAGGCCGCACGGCCAGCGTGCTGTTCGCGGGGTTCCGGGCCTTGGGGCTGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS CAA 90 bp | AAGCGGCGCTTGAGCGCGCTGTACCGCACCACGTGTGGAACCTCGTaGCTGAACAGCCCCAAGGCCCGGAACCCCGCGAACAGCACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: KRRLSALYRTTCGTS*LNSPKARNPANSTL Trigger: CAGCGTGCTGTTCGCGGGGTTCCGGGCCTTGGGGCTGTTCAGCAACGAGGTTCCACACGTGGTGCGGTACAGCGCGCTCAAGCGCCGCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS TCA 72 bp | GCGCGCTGTACCGCACCACGTGTGGAACCTCGTTGCTaGACAGCCCCAAGGCCCGGAACCCCGCGAACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ARCTAPRVEPRC*TAPRPGTPRTA Trigger: TGCTGTTCGCGGGGTTCCGGGCCTTGGGGCTGTTCAGCAACGAGGTTCCACACGTGGTGCGGTACAGCGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS CCA 72 bp | GAAGCGGCGCTTGAGCGCGCTGTACCGCACCACGTGTaGAACCTCGTTGCTGAACAGCCCCAAGGCCCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: EAALERAVPHHV*NLVAEQPQGPE Trigger: TTCCGGGCCTTGGGGCTGTTCAGCAACGAGGTTCCACACGTGGTGCGGTACAGCGCGCTCAAGCGCCGCTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS CAA 72 bp | TTGAGCGCGCTGTACCGCACCACGTGTGGAACCTCGTaGCTGAACAGCCCCAAGGCCCGGAACCCCGCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LSALYRTTCGTS*LNSPKARNPAN Trigger: GTTCGCGGGGTTCCGGGCCTTGGGGCTGTTCAGCAACGAGGTTCCACACGTGGTGCGGTACAGCGCGCTCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS TCA 72 bp | TCTTGCCCACGCAAGTCGTCACGTAGAAGCGGCGCTTaGGCGCGCTGTACCGCACCACGTGTGGAACCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: SCPRKSSRRSGA*ARCTAPRVEPR Trigger: ACGAGGTTCCACACGTGGTGCGGTACAGCGCGCTCAAGCGCCGCTTCTACGTGACGACTTGCGTGGGCAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS GCA 72 bp | CAGCGTGACTCAGGGAGAAGGGAGAGAGTCACCAGTTaGTCACTCAACTGTTCTGGCGACTCATACTCTATC | + |
|
Preference number: 6 (lower is better) Translates to: QRDSGRRERVTS*SLNCSGDSYSI Trigger: GATAGAGTATGAGTCGCCAGAACAGTTGAGTGAGCAACTGGTGACTCTCTCCCTTCTCCCTGAGTCACGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS CAA 90 bp | AGACCGCTTCCCTTGATGGCAAGCAATGATACCATCCCAGTCACTTaGACGAGCTTCCTCAGCAGCAAACTGTGTGATAGGTGGGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RPLPLMASNDTIPVT*TSFLSSKLCDRWEP Trigger: AGGCTCCCACCTATCACACAGTTTGCTGCTGAGGAAGCTCGTCAAAGTGACTGGGATGGTATCATTGCTTGCCATCAAGGGAAGCGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS TCA 72 bp | AGGTTGAGCAAGACCGCTTCCCTTGATGGCAAGCAATaGTACCATCCCAGTCACTTTGACGAGCTTCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RLSKTASLDGKQ*YHPSHFDELPQ Trigger: CTGAGGAAGCTCGTCAAAGTGACTGGGATGGTATCATTGCTTGCCATCAAGGGAAGCGGTCTTGCTCAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS CCA 72 bp | AGCCCAGGAACTGTTGGGATGAAAAACGGAGCTGACTaGGGAACCTTGGGCGGCTCTTTGGGTTTATTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SPGTVGMKNGAD*GTLGGSLGLFF Trigger: AAAGAATAAACCCAAAGAGCCGCCCAAGGTTCCCCAGTCAGCTCCGTTTTTCATCCCAACAGTTCCTGGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS CAA 72 bp | CCAGGATGCCGCTGTCCCTGTGTAGCAGCATCATATTaGGAGACGAATCAAGGCCCAGAGAGTGGATCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: PGCRCPCVAASY*ETNQGPESGSK Trigger: TTTTGATCCACTCTCTGGGCCTTGATTCGTCTCCAAATATGATGCTGCTACACAGGGACAGCGGCATCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS GCA 72 bp | CATATGCAGCGAAGACTAGCCTCCCATCGGCTGCCATaGAACAGATATCCTGTGGAACAGAGTTACTTACTG | + |
|
Preference number: 6 (lower is better) Translates to: HMQRRLASHRLP*NRYPVEQSYLL Trigger: CAGTAAGTAACTCTGTTCCACAGGATATCTGTTGCATGGCAGCCGATGGGAGGCTAGTCTTCGCTGCATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS CCA 72 bp | CAGCGGCCATCAGGACTGAACGTCATGTCATTTATTTaGCCGTGGTGTCCAGAAAACTCTCTGACGATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QRPSGLNVMSFI*PWCPENSLTIF Trigger: GAAGATCGTCAGAGAGTTTTCTGGACACCACGGCCAAATAAATGACATGACGTTCAGTCCTGATGGCCGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS CCA 72 bp | TACCTTGGGTTTGACAAGTACCAGGAAGCATCACTATaGAAGGGACATAATCTGGAGGAAGTGGTCGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: YLGFDKYQEASL*KGHNLEEVVAG Trigger: CCCTGCGACCACTTCCTCCAGATTATGTCCCTTCCATAGTGATGCTTCCTGGTACTTGTCAAACCCAAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS CCA 72 bp | AGGGGACAGGTTTCGCAGCTCTGTTTCAATCCCAGATaGGCCCAATTCTTTCAGAAGGTTAAGAGCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RGQVSQLCFNPR*AQFFQKVKSSF Trigger: GAAGCTGCTCTTAACCTTCTGAAAGAATTGGGCCCATCTGGGATTGAAACAGAGCTGCGAAACCTGTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS CAA 72 bp | CCCTTGATGGCAAGCAATGATACCATCCCAGTCACTTaGACGAGCTTCCTCAGCAGCAAACTGTGTGATAGG | + |
|
Preference number: 6 (lower is better) Translates to: PLMASNDTIPVT*TSFLSSKLCDR Trigger: CCTATCACACAGTTTGCTGCTGAGGAAGCTCGTCAAAGTGACTGGGATGGTATCATTGCTTGCCATCAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS CAA 72 bp | CCAGCGGCCATCAGGACTGAACGTCATGTCATTTATTaGGCCGTGGTGTCCAGAAAACTCTCTGACGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: PAAIRTERHVIY*AVVSRKLSDDL Trigger: AAGATCGTCAGAGAGTTTTCTGGACACCACGGCCAAATAAATGACATGACGTTCAGTCCTGATGGCCGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
||
| CDS CAA 90 bp | GCTTATCAACCAGCGGCCATCAGGACTGAACGTCATGTCATTTATTaGGCCGTGGTGTCCAGAAAACTCTCTGACGATCTTCCTAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: AYQPAAIRTERHVIY*AVVSRKLSDDLPSL Trigger: GAGACTAGGAAGATCGTCAGAGAGTTTTCTGGACACCACGGCCAAATAAATGACATGACGTTCAGTCCTGATGGCCGCTGGTTGATAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
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| CDS TCA 72 bp | GCTCCTCTAAAAGCGCTGGCTCCGAAGGAAGCGTTCTaGGGTGTAACTTCAAAAACAATGCAAGGTATGCCT | + |
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Preference number: 6 (lower is better) Translates to: APLKALAPKEAF*GVTSKTMQGMP Trigger: AGGCATACCTTGCATTGTTTTTGAAGTTACACCTCAGAACGCTTCCTTCGGAGCCAGCGCTTTTAGAGGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
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| CDS CCA 72 bp | TTGAGTAACCGTTCACTTCCAGCTGTAACCACCAGCTaGTTTAATCCATCCACGGCAACACCTCTAACAGAG | + |
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Preference number: 6 (lower is better) Translates to: LSNRSLPAVTTS*FNPSTATPLTE Trigger: CTCTGTTAGAGGTGTTGCCGTGGATGGATTAAACCAGCTGGTGGTTACAGCTGGAAGTGAACGGTTACTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
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| CDS CCA 72 bp | CCATCAGGACTGAACGTCATGTCATTTATTTGGCCGTaGTGTCCAGAAAACTCTCTGACGATCTTCCTAGTC | + |
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Preference number: 6 (lower is better) Translates to: PSGLNVMSFIWP*CPENSLTIFLV Trigger: GACTAGGAAGATCGTCAGAGAGTTTTCTGGACACCACGGCCAAATAAATGACATGACGTTCAGTCCTGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
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| CDS CCA 72 bp | AAGGGAGAGAGTCACCAGTTGCTCACTCAACTGTTCTaGCGACTCATACTCTATCATTTCATCACTTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: KGESHQLLTQLF*RLILYHFITWL Trigger: GAGCCAAGTGATGAAATGATAGAGTATGAGTCGCCAGAACAGTTGAGTGAGCAACTGGTGACTCTCTCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
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| CDS TCA 72 bp | CTCAGCAGCAAACTGTGTGATAGGTGGGAGCCTTACTaGCATGGTGTTCTGAAGTCCTTTCCGTTTAACTAT | + |
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Preference number: 6 (lower is better) Translates to: LSSKLCDRWEPY*HGVLKSFPFNY Trigger: ATAGTTAAACGGAAAGGACTTCAGAACACCATGTCAGTAAGGCTCCCACCTATCACACAGTTTGCTGCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
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| CDS CAA 90 bp | GCTGTCACTCCAACTTTCCACCCTGGAAATGTATATAGAAGCTTATaGGACTTTATATTCCATAACTGTAGGCTTCCCTGCTCACTGCCC | + |
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Preference number: 6 (lower is better) Translates to: AVTPTFHPGNVYRSL*DFIFHNCRLPCSLP Trigger: GGGCAGTGAGCAGGGAAGCCTACAGTTATGGAATATAAAGTCCAATAAGCTTCTATATACATTTCCAGGGTGGAAAGTTGGAGTGACAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
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| CDS CAA 90 bp | ATCACTTGGCTCAGTCTTTTCTTCCAAGTCTTCCATACCTTGGGTTaGACAAGTACCAGGAAGCATCACTATGGAAGGGACATAATCTGG | + |
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Preference number: 6 (lower is better) Translates to: ITWLSLFFQVFHTLG*TSTRKHHYGRDIIW Trigger: CCAGATTATGTCCCTTCCATAGTGATGCTTCCTGGTACTTGTCAAACCCAAGGTATGGAAGACTTGGAAGAAAAGACTGAGCCAAGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
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| CDS CAA 90 bp | GCTCACTCAACTGTTCTGGCGACTCATACTCTATCATTTCATCACTaGGCTCAGTCTTTTCTTCCAAGTCTTCCATACCTTGGGTTTGAC | + |
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Preference number: 6 (lower is better) Translates to: AHSTVLATHTLSFHH*AQSFLPSLPYLGFD Trigger: GTCAAACCCAAGGTATGGAAGACTTGGAAGAAAAGACTGAGCCAAGTGATGAAATGATAGAGTATGAGTCGCCAGAACAGTTGAGTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
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| CDS TCA 72 bp | ATAAGCACCTATTGTAGACCTTTGGTAATTCCAGGTTaGGCAAGACCGCTTCCCTTGATGGCAAGCAATGAT | + |
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Preference number: 6 (lower is better) Translates to: ISTYCRPLVIPG*ARPLPLMASND Trigger: ATCATTGCTTGCCATCAAGGGAAGCGGTCTTGCTCAACCTGGAATTACCAAAGGTCTACAATAGGTGCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
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| CDS CCA 72 bp | TTATCAGCGCCATTTGTAACAAGCAACGGCTCTCTATaGAGAAATGTCAGCCCAGATATTGCTGTAGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: LSAPFVTSNGSL*RNVSPDIAVEC Trigger: ACACTCTACAGCAATATCTGGGCTGACATTTCTCCATAGAGAGCCGTTGCTTGTTACAAATGGCGCTGATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
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| CDS TCA 72 bp | AATGTGCCAAATAATAAGAACGCTGTCAGTATCCACTaGGATAACGTGATCCCCAAAGGGTTGCAAAAGATG | + |
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Preference number: 6 (lower is better) Translates to: NVPNNKNAVSIH*DNVIPKGLQKM Trigger: CATCTTTTGCAACCCTTTGGGGATCACGTTATCTCAGTGGATACTGACAGCGTTCTTATTATTTGGCACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
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| CDS TCA 72 bp | TATACCAGACTGCATGTTATACACATCTACAGCTCCTaGAGAGAGGCCAATTATTGCAAAGTTTCCACAGGA | + |
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Preference number: 6 (lower is better) Translates to: YTRLHVIHIYSS*REANYCKVSTG Trigger: TCCTGTGGAAACTTTGCAATAATTGGCCTCTCTTCAGGAGCTGTAGATGTGTATAACATGCAGTCTGGTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
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| CDS GCA 72 bp | ACTTTATATTCCATAACTGTAGGCTTCCCTGCTCACTaGCCAGTAGGACTTTATTCAAATAGGTGCTTGGAT | + |
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Preference number: 6 (lower is better) Translates to: TLYSITVGFPAH*PVGLYSNRCLD Trigger: ATCCAAGCACCTATTTGAATAAAGTCCTACTGGGCAGTGAGCAGGGAAGCCTACAGTTATGGAATATAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
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| CDS TCA 72 bp | TGTGTGATAGGTGGGAGCCTTACTGACATGGTGTTCTaGAGTCCTTTCCGTTTAACTATCTTTTTGTTTACT | + |
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Preference number: 6 (lower is better) Translates to: CVIGGSLTDMVF*SPFRLTIFLFT Trigger: AGTAAACAAAAAGATAGTTAAACGGAAAGGACTTCAGAACACCATGTCAGTAAGGCTCCCACCTATCACACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
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| CDS CAA 72 bp | TATACACATCTACAGCTCCTGAAGAGAGGCCAATTATaGCAAAGTTTCCACAGGAAGTTATATCTACTGCTG | + |
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Preference number: 6 (lower is better) Translates to: YTHLQLLKRGQL*QSFHRKLYLLL Trigger: CAGCAGTAGATATAACTTCCTGTGGAAACTTTGCAATAATTGGCCTCTCTTCAGGAGCTGTAGATGTGTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
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| CDS GCA 72 bp | AATTATTGCAAAGTTTCCACAGGAAGTTATATCTACTaGTGTTGCAGTGAGGTTGCTATTTGTCTTTACACC | + |
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Preference number: 6 (lower is better) Translates to: NYCKVSTGSYIY*CCSEVAICLYT Trigger: GGTGTAAAGACAAATAGCAACCTCACTGCAACAGCAGTAGATATAACTTCCTGTGGAAACTTTGCAATAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053663.11 ENSMUST00000166214.9 |
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