Pregenerated sensors for WDR3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033285Ensembl transcript IDs: ENSMUST00000052120.14, ENSMUST00000125059.6, ENSMUST00000197602.2
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGACATCTGTATCCTTAGACCCAGAAGCCAGCCTGCCTCCTAGCTaGTCGTACTTTAAGCTGGTGACAGCTGCTTTGTGTCCATTGAAG | + |
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Preference number: 1 (lower is better) Translates to: MTSVSLDPEASLPPS*SYFKLVTAALCPLK Trigger: CTTCAATGGACACAAAGCAGCTGTCACCAGCTTAAAGTACGATCAGCTAGGAGGCAGGCTGGCTTCTGGGTCTAAGGATACAGATGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125059.6 |
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| 3UTR TCA 90 bp | CCAAATAATGACATCTTAGACCCAGAAGCCAGCCTGCCTCCTAGCTaGTCGTACTTTAAGCTGGTGACAGCTGCTTTGTGTCCATTGAAG | + |
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Preference number: 1 (lower is better) Translates to: PNNDILDPEASLPPS*SYFKLVTAALCPLK Trigger: CTTCAATGGACACAAAGCAGCTGTCACCAGCTTAAAGTACGATCAGCTAGGAGGCAGGCTGGCTTCTGGGTCTAAGATGTCATTATTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197602.2 |
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| 3UTR GCA 90 bp | AAGCTATTGTATTTCCAAAAGTACAAACAGCATTATGACCTTACATaGAGACTCACCAACCTGCACTGGTGTAAGCAGGCAGCTCTTAGC | + |
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Preference number: 1 (lower is better) Translates to: KLLYFQKYKQHYDLT*RLTNLHWCKQAALS Trigger: GCTAAGAGCTGCCTGCTTACACCAGTGCAGGTTGGTGAGTCTGCATGTAAGGTCATAATGCTGTTTGTACTTTTGGAAATACAATAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| 3UTR-3UTR GCA 90 bp | CAGCAGATTCCTTTCTCGGAGAAACAAAGCTTGTGTGACAGCATCCTTGTGTCCACCCAGAAGCCAGCCTaGCTCCTAGCTGATCGTACT | + |
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Preference number: 2 (lower is better) Translates to: QQIPFSEKQSLCDSILVSTQKPA*LLADRT Trigger: AGTACGATCAGCTAGGAGGCAGGCTGGCTTCTGGGT...GGACACAAGGATGCTGTCACACAAGCTTTGTTTCTCCGAGAAAGGAATCTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125059.6 ENSMUST00000197602.2 |
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| 3UTR-3UTR TCA 90 bp | AGATTCCTTTCTCGGAGAAACAAAGCTTGTGTGACAGCATCCTTGTGTCCCTTTCTGCTTTGTGTCCATTaGAGGTTATGTTTCCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: RFLSRRNKACVTASLCPFLLCVH*RLCFLH Trigger: GTGAAGGAAACATAACCTTCAATGGACACAAAGCAG...AAAGGGACACAAGGATGCTGTCACACAAGCTTTGTTTCTCCGAGAAAGGAATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125059.6 ENSMUST00000197602.2 |
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| 3UTR TCA 72 bp | GTATCCTTAGACCCAGAAGCCAGCCTGCCTCCTAGCTaGTCGTACTTTAAGCTGGTGACAGCTGCTTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: VSLDPEASLPPS*SYFKLVTAALC Trigger: ACACAAAGCAGCTGTCACCAGCTTAAAGTACGATCAGCTAGGAGGCAGGCTGGCTTCTGGGTCTAAGGATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125059.6 |
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| 3UTR TCA 72 bp | GACATCTTAGACCCAGAAGCCAGCCTGCCTCCTAGCTaGTCGTACTTTAAGCTGGTGACAGCTGCTTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: DILDPEASLPPS*SYFKLVTAALC Trigger: ACACAAAGCAGCTGTCACCAGCTTAAAGTACGATCAGCTAGGAGGCAGGCTGGCTTCTGGGTCTAAGATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197602.2 |
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| 3UTR CCA 72 bp | CATTATGACCTTACATGCAGACTCACCAACCTGCACTaGTGTAAGCAGGCAGCTCTTAGCAGGCCATCATCC | + |
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Preference number: 3 (lower is better) Translates to: HYDLTCRLTNLH*CKQAALSRPSS Trigger: GGATGATGGCCTGCTAAGAGCTGCCTGCTTACACCAGTGCAGGTTGGTGAGTCTGCATGTAAGGTCATAATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| 3UTR TCA 72 bp | CCAGCAGATTCCTTTCTCGGAGAAACAAAGCTTGTGTaGCAGCATCCTTGTGTCCCTTTAGACGGTAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: PADSFLGETKLV*QHPCVPLDGRG Trigger: GCCTCTACCGTCTAAAGGGACACAAGGATGCTGTCACACAAGCTTTGTTTCTCCGAGAAAGGAATCTGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125059.6 ENSMUST00000197602.2 |
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| 3UTR GCA 72 bp | AACAGCATTATGACCTTACATGCAGACTCACCAACCTaGACTGGTGTAAGCAGGCAGCTCTTAGCAGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: NSIMTLHADSPT*TGVSRQLLAGH Trigger: ATGGCCTGCTAAGAGCTGCCTGCTTACACCAGTGCAGGTTGGTGAGTCTGCATGTAAGGTCATAATGCTGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| 3UTR-3UTR CAA 90 bp | GATCACATCCCAAATAATGACATCTGTATCCTTAGACCCAGAAGCCAGCCTGCCGCTGCTTTGTGTCCATaGAAGGTTATGTTTCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: DHIPNNDICILRPRSQPAAALCP*KVMFPS Trigger: TGAAGGAAACATAACCTTCAATGGACACAAAGCAGC...GGCAGGCTGGCTTCTGGGTCTAAGGATACAGATGTCATTATTTGGGATGTGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125059.6 |
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| 3UTR-3UTR CAA 90 bp | GCGCTTCCTTTAGAGGACAATGACACACACGGTAAACAGAAAAGCTCTAATACAGTAGTCACAGCCATGTaGGTTTCTTCAACCAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: ALPLEDNDTHGKQKSSNTVVTAM*VSSTKA Trigger: AGCCTTGGTTGAAGAAACCAACATGGCTGTGACTAC...TGTATTAGAGCTTTTCTGTTTACCGTGTGTGTCATTGTCCTCTAAAGGAAGCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| 3UTR TCA 72 bp | AGTAGTCACAGCCATGTTGGTTTCTTCAACCAAGGCTaGCATCTGTACCCCAAGATCTACAACATGATCTTT | + |
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Preference number: 3 (lower is better) Translates to: SSHSHVGFFNQG*HLYPKIYNMIF Trigger: AAAGATCATGTTGTAGATCTTGGGGTACAGATGTCAGCCTTGGTTGAAGAAACCAACATGGCTGTGACTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| 3UTR GCA 72 bp | TATTTCCAAAAGTACAAACAGCATTATGACCTTACATaGAGACTCACCAACCTGCACTGGTGTAAGCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: YFQKYKQHYDLT*RLTNLHWCKQA Trigger: TGCCTGCTTACACCAGTGCAGGTTGGTGAGTCTGCATGTAAGGTCATAATGCTGTTTGTACTTTTGGAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR CCA 90 bp | GTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGTGGGACATAGGAGAATaGCAGCACAAGCAGGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: VSRQLLAGHHPFQPQSMAWDIGE*QHKQGL Trigger: GAGGCCCTGCTTGTGCTGCCATTCTCCTATGTCCCA...CGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR TCA 90 bp | GTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGTGTCTGCAGCCCCAGTaGTTAGTCGCTTTTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: VSRQLLAGHHPFQPQSMACLQPQ*LVAFLL Trigger: CAGAAGAAAAGCGACTAATCACTGGGGCTGCAGACA...CGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR TCA 90 bp | GCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCTTCCTTTAGACTGTCTTTGTTCCTATaGCCACCTGCCTATCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: ALSRPSSLSAPVHGASFRLSLFL*PPAYRR Trigger: CCGGCGATAGGCAGGTGGTCATAGGAACAAAGACAG...TCTAAAGGAAGCGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR TCA 90 bp | TTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCTTCCTTTAGAGGACCTGCATCCCACTGCTTaGTCTTGTGGTCCTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LAGHHPFQPQSMALPLEDLHPTA*SCGPSQ Trigger: CTGGGAAGGACCACAAGATCAAGCAGTGGGATGCAG...GTCCTCTAAAGGAAGCGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR TCA 90 bp | GTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGAGTCTCCACTGGGGCTaGCAGCCAAACACCATATTT | + |
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Preference number: 4 (lower is better) Translates to: VSRQLLAGHHPFQPQSMASLHWG*QPNTIF Trigger: AAATATGGTGTTTGGCTGTCAGCCCCAGTGGAGACT...CGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR TCA 90 bp | CACTGGTGTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCGCATCTGGTTGCTGGTaGTCTGGCCAAAGTGAATCC | + |
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Preference number: 4 (lower is better) Translates to: HWCKQAALSRPSSLSAPVASGCW*SGQSES Trigger: GGATTCACTTTGGCCAGATCACCAGCAACCAGATGC...GACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTACACCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR GCA 90 bp | TGGTGTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATACCCAGAAGCCAGCCTaGCTCCTAGCTGATCGTACT | + |
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Preference number: 4 (lower is better) Translates to: WCKQAALSRPSSLSAPVHTQKPA*LLADRT Trigger: AGTACGATCAGCTAGGAGGCAGGCTGGCTTCTGGGT...ATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTACACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR CCA 90 bp | TGCCAACTCCACAACAGCTCAGTTTATGTGTACGCTCCTTTGAGAAGAAGCAGGCGCACGTCGCTGCGGTaGCCTCCAATGGTGATCCGG | + |
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Preference number: 4 (lower is better) Translates to: CQLHNSSVYVYAPLRRSRRTSLR*PPMVIR Trigger: CCGGATCACCATTGGAGGCCACCGCAGCGACGTGCG...CCTGCTTCTTCTCAAAGGAGCGTACACATAAACTGAGCTGTTGTGGAGTTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR CCA 90 bp | GTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCATATTCACAAGGCATaGTGCGGATACACTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VSRQLLAGHHPFQPQSMAHIHKA*CGYTAG Trigger: CCCTGCAGTGTATCCGCACCATGCCTTGTGAATATG...CGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR TCA 90 bp | CTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCTTCCTTTAGAGGAGCGGTGAAGAAGAGGTaGGACTTAGGCACAAAGCGT | + |
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Preference number: 4 (lower is better) Translates to: LSRPSSLSAPVHGASFRGAVKKR*DLGTKR Trigger: ACGCTTTGTGCCTAAGTCTCACCTCTTCTTCACCGC...TCCTCTAAAGGAAGCGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR CCA 90 bp | GTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCACACCTCAGTTCGGTaGCCAACCATTGTTTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: VSRQLLAGHHPFQPQSMAHTSVR*PTIVLK Trigger: CTTCAAAACAATGGTTGGCCACCGAACTGAGGTGTG...CGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR CCA 90 bp | GTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGACAGAATCAGTTCCGTaGCAAGCAAGAATCCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: VSRQLLAGHHPFQPQSMATESVP*QARILP Trigger: AGGCAGGATTCTTGCTTGCCACGGAACTGATTCTGT...CGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR CCA 90 bp | GCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCTTCCTTTAGAGCAAAGAGAGACCTGTaGCAGTCCCCAAAGTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: ALSRPSSLSAPVHGASFRAKRDL*QSPKSR Trigger: TCTGGACTTTGGGGACTGCCACAGGTCTCTCTTTGC...TCTAAAGGAAGCGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR TCA 90 bp | CACTGGTGTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCTATATTATCCGAGCTaGAGGACAAAGTGCGCACGT | + |
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Preference number: 4 (lower is better) Translates to: HWCKQAALSRPSSLSAPVLYYPS*RTKCAR Trigger: ACGTGCGCACTTTGTCCTTCAGCTCGGATAATATAG...GACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTACACCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR TCA 90 bp | TGGTGTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATCAAAATCCCAGAACTTaGCAGCTTTGTCAGCGCCAC | + |
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Preference number: 4 (lower is better) Translates to: WCKQAALSRPSSLSAPVHQNPRT*QLCQRH Trigger: GTGGCGCTGACAAAGCTGTCAAGTTCTGGGATTTTG...ATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTACACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR TCA 90 bp | TTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCTTCCTTTAGAGGACGGAGAAATATTGCCATaGGCCATCAGGATGGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: LAGHHPFQPQSMALPLEDGEILP*AIRMGL Trigger: CAACCCCATCCTGATGGCTCATGGCAATATTTCTCC...GTCCTCTAAAGGAAGCGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR TCA 90 bp | CTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCTTCCTTTAGAGGAGAAACAAAGCTTGTGTaGCAGCATCCTTGTGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LSRPSSLSAPVHGASFRGETKLV*QHPCVP Trigger: AGGGACACAAGGATGCTGTCACACAAGCTTTGTTTC...TCCTCTAAAGGAAGCGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR TCA 90 bp | GCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCTTCCTTTAGAGGCCAACCATTGTTTTaGAGCAGTGCTGGTTATCCA | + |
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Preference number: 4 (lower is better) Translates to: ALSRPSSLSAPVHGASFRGQPLF*SSAGYP Trigger: TGGATAACCAGCACTGCTTCAAAACAATGGTTGGCC...TCTAAAGGAAGCGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR TCA 90 bp | TTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCTTCCTTTAGAGGACGGAATCGGCTGCTGCTaGAAGCACAGCTATATTATC | + |
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Preference number: 4 (lower is better) Translates to: LAGHHPFQPQSMALPLEDGIGCC*KHSYII Trigger: GATAATATAGCTGTGCTTTCAGCAGCAGCCGATTCC...GTCCTCTAAAGGAAGCGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR GCA 90 bp | CACTGGTGTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCATTGTTTTGAAGCAGTaGTGGTTATCCAGGTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: HWCKQAALSRPSSLSAPVIVLKQ*WLSRSH Trigger: GTGGGACCTGGATAACCAGCACTGCTTCAAAACAAT...GACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTACACCAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR GCA 90 bp | CACTGGTGTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCAGAAAACCTTCACAGTaGAGTCCAGCAAAGACACAG | + |
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Preference number: 4 (lower is better) Translates to: HWCKQAALSRPSSLSAPVRKPSQ*SPAKTQ Trigger: CTGTGTCTTTGCTGGACTGCACTGTGAAGGTTTTCT...GACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTACACCAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR GCA 90 bp | CTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCTTCCTTTAGAGGACACACTGTCATCATGTaGAAAGAGAGACCTGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: LSRPSSLSAPVHGASFRGHTVIM*KERPVA Trigger: TGCCACAGGTCTCTCTTTGCACATGATGACAGTGTG...TCCTCTAAAGGAAGCGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR GCA 90 bp | AACCTGCACTGGTGTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCAACCTCTTTCCCCGCTaGTTTACAAATGGCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: NLHWCKQAALSRPSSLSANLFPR*FTNGSV Trigger: CACAGAGCCATTTGTAAAGCAGCGGGGAAAGAGGTT...GGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTACACCAGTGCAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR CCA 90 bp | CTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCTTCCTTTAGAGGAAAAGCCACGCTGATCTaGAGAAAGAGACATGGACCA | + |
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Preference number: 4 (lower is better) Translates to: LSRPSSLSAPVHGASFRGKATLI*RKRHGP Trigger: TGGTCCATGTCTCTTTCTCCAGATCAGCGTGGCTTT...TCCTCTAAAGGAAGCGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR CCA 90 bp | AACCTGCACTGGTGTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCAAACACCATATTTCCTaGTGGTGTCCCTCCAGCGTT | + |
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Preference number: 4 (lower is better) Translates to: NLHWCKQAALSRPSSLSAKHHIS*WCPSSV Trigger: AACGCTGGAGGGACACCACCAGGAAATATGGTGTTT...GGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTACACCAGTGCAGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR GCA 90 bp | TCCCAAATAATGACATCTGTATCCTTAGACCCAGAAGCCAGCCTGCCTCCTAGCTTCACAGGCGGGTACTaGCACATAGCGTCCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SQIMTSVSLDPEASLPPSFTGGY*HIASFL Trigger: GAGAAAGGACGCTATGTGGCAGTACCCGCCTGTGAA...GCTAGGAGGCAGGCTGGCTTCTGGGTCTAAGGATACAGATGTCATTATTTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125059.6 |
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| CDS-3UTR GCA 90 bp | TTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCTTCCTTTAGAGGACTGCAAGGTTCGAGTCTaGTTCACAGAAAGTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LAGHHPFQPQSMALPLEDCKVRV*FTESLF Trigger: GAAGAGACTTTCTGTGAAGCAGACTCGAACCTTGCA...GTCCTCTAAAGGAAGCGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR GCA 90 bp | GCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCTTCCTTTAGATACTCTGCTTCCCTTTaGATTTCCCTTTCTTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: ALSRPSSLSAPVHGASFRYSASL*ISLSSS Trigger: CGAGGAAGAAAGGGAAATGCAAAGGGAAGCAGAGTA...TCTAAAGGAAGCGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR TCA 90 bp | TGCCAACTCCACAACAGCTCAGTTTATGTGTACGCTCCTTTGAGAAGAAGCAGGGATTGGGAGAGTAGCTaGCACACAGGACGTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: CQLHNSSVYVYAPLRRSRDWESS*HTGRPH Trigger: ATGAGGACGTCCTGTGTGTCAGCTACTCTCCCAATC...CCTGCTTCTTCTCAAAGGAGCGTACACATAAACTGAGCTGTTGTGGAGTTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR GCA 90 bp | TGCCAACTCCACAACAGCTCAGTTTATGTGTACGCTCCTTTGAGAAGAAGCAGGGCAGTTTCTTCTCGATaGAGCTCGATGGCCTCCATG | + |
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Preference number: 4 (lower is better) Translates to: CQLHNSSVYVYAPLRRSRAVSSR*SSMASM Trigger: CATGGAGGCCATCGAGCTGCATCGAGAAGAAACTGC...CCTGCTTCTTCTCAAAGGAGCGTACACATAAACTGAGCTGTTGTGGAGTTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR CCA 90 bp | AACCTGCACTGGTGTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCACATCCAAGCCCGTCTaGATGAATTCATTGAACAGT | + |
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Preference number: 4 (lower is better) Translates to: NLHWCKQAALSRPSSLSATSKPV*MNSLNS Trigger: ACTGTTCAATGAATTCATCCAGACGGGCTTGGATGT...GGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTACACCAGTGCAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR CCA 90 bp | TTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCTTCCTTTAGAGGACAAGCCAATGGCATCCTaGACTTGTCTGACTTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: LAGHHPFQPQSMALPLEDKPMAS*TCLTFE Trigger: TTCAAAAGTCAGACAAGTCCAGGATGCCATTGGCTT...GTCCTCTAAAGGAAGCGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR TCA 90 bp | TTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCTTCCTTTAGAGGACTTCTTCTCTTCCAAGTaGCTAGTAGCTTCTGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LAGHHPFQPQSMALPLEDFFSSK*LVASAK Trigger: TTTTGCAGAAGCTACTAGTCACTTGGAAGAGAAGAA...GTCCTCTAAAGGAAGCGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR GCA 90 bp | TCCTTCACCACTGAGGAGGCTGAAGATTCGGATGGCTCCATCCTCATAGCCAACTGTTACCTTTTTGGCTaGCAATCAAGCCAAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SFTTEEAEDSDGSILIANCYLFG*QSSQRQ Trigger: CTGTCTTTGGCTTGATTGGCAGCCAAAAAGGTAACA...GTTGGCTATGAGGATGGAGCCATCCGAATCTTCAGCCTCCTCAGTGGTGAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000125059.6 ENSMUST00000197602.2 |
||
| CDS-3UTR GCA 90 bp | TGCCAACTCCACAACAGCTCAGTTTATGTGTACGCTCCTTTGAGAAGAAGCAGGTTGTCTCCAAGAGAGTaGCTGAGGCCAGGTCGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: CQLHNSSVYVYAPLRRSRLSPRE*LRPGRK Trigger: TTTACGACCTGGCCTCAGGCACTCTCTTGGAGACAA...CCTGCTTCTTCTCAAAGGAGCGTACACATAAACTGAGCTGTTGTGGAGTTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CCA 90 bp | GCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCTTCCTTTAGAACAATGTTACCTTTTTaGCTGCCAATCAAGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALSRPSSLSAPVHGASFRTMLPF*LPIKPK Trigger: CTTTGGCTTGATTGGCAGCCAAAAAGGTAACATTGT...TCTAAAGGAAGCGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CCA 90 bp | TGCCAACTCCACAACAGCTCAGTTTATGTGTACGCTCCTTTGAGAAGAAGCAGGCTGGAGAAAGAGACATaGACCACAGGGCTCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: CQLHNSSVYVYAPLRRSRLEKET*TTGLHH Trigger: ATGATGGAGCCCTGTGGTCCATGTCTCTTTCTCCAG...CCTGCTTCTTCTCAAAGGAGCGTACACATAAACTGAGCTGTTGTGGAGTTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CCA 90 bp | GCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCTTCCTTTAGAATTAGTGCTCCATCATaGGAGATGTCCATGCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: ALSRPSSLSAPVHGASFRISAPS*EMSMHK Trigger: TTTATGCATGGACATCTCCCATGATGGAGCACTAAT...TCTAAAGGAAGCGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CCA 90 bp | ATTTCCAAAAGTACAAACAGCATTATGACCTTACATGCAGACTCACCAACCTGCCCTGGAACTGCCGGCTaGTCTTCTTTGGCCACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISKSTNSIMTLHADSPTCPGTAG*SSLATL Trigger: GAGCGTGGCCAAAGAAGACCAGCCGGCAGTTCCAGG...GCAGGTTGGTGAGTCTGCATGTAAGGTCATAATGCTGTTTGTACTTTTGGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CCA 90 bp | TGCCAACTCCACAACAGCTCAGTTTATGTGTACGCTCCTTTGAGAAGAAGCAGGTGTCCCTCCAGCGTTTaGATGTGCTCAAACTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CQLHNSSVYVYAPLRRSRCPSSV*MCSNLS Trigger: AGACAAGTTTGAGCACATCCAAACGCTGGAGGGACA...CCTGCTTCTTCTCAAAGGAGCGTACACATAAACTGAGCTGTTGTGGAGTTGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CCA 90 bp | TGCCAACTCCACAACAGCTCAGTTTATGTGTACGCTCCTTTGAGAAGAAGCAGGCAGTGTAAGAACGTCTaGGACATAGGAGAATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CQLHNSSVYVYAPLRRSRQCKNV*DIGEWQ Trigger: CTGCCATTCTCCTATGTCCCAGACGTTCTTACACTG...CCTGCTTCTTCTCAAAGGAGCGTACACATAAACTGAGCTGTTGTGGAGTTGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR TCA 90 bp | GCGCTTCCTTTAGAGGACAATGACACACACGGTAAACAGAAAAGCTCTAATACACGAGACCAGCCATATTaGAGCCAATGGCATCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALPLEDNDTHGKQKSSNTRDQPY*SQWHPG Trigger: TCCAGGATGCCATTGGCTTCAATATGGCTGGTCTCG...TGTATTAGAGCTTTTCTGTTTACCGTGTGTGTCATTGTCCTCTAAAGGAAGCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR GCA 90 bp | TCCCAAATAATGACATCTGTATCCTTAGACCCAGAAGCCAGCCTGCCTCCTAGCTGTTACCTTTTTGGCTaGCAATCAAGCCAAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SQIMTSVSLDPEASLPPSCYLFG*QSSQRQ Trigger: CTGTCTTTGGCTTGATTGGCAGCCAAAAAGGTAACA...GCTAGGAGGCAGGCTGGCTTCTGGGTCTAAGGATACAGATGTCATTATTTGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125059.6 |
||
| CDS-3UTR GCA 90 bp | GGTATTTTTATGTTGCCAACTCCACAACAGCTCAGTTTATGTGTACGCTCCTTTGGCAAGCAAGAATCCTaGCTGTCTTGTCCACGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GIFMLPTPQQLSLCVRSFGKQES*LSCPRR Trigger: TCGCCGTGGACAAGACAGGCAGGATTCTTGCTTGCC...AAAGGAGCGTACACATAAACTGAGCTGTTGTGGAGTTGGCAACATAAAAATACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CCA 90 bp | GCGCTTCCTTTAGAGGACAATGACACACACGGTAAACAGAAAAGCTCTAATACACACAGGGCTCCATCATaGGCAGCTATTGTCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALPLEDNDTHGKQKSSNTHRAPS*AAIVSK Trigger: CTTGGAGACAATAGCTGCCCATGATGGAGCCCTGTG...TGTATTAGAGCTTTTCTGTTTACCGTGTGTGTCATTGTCCTCTAAAGGAAGCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CCA 90 bp | CGTCCTTTTCAAAAGATGAAAGACAGTAGTCACAGCCATGTTGGTTTCTTCAACCCGGCTGGTCTTCTTTaGCCACGCTCTCCTCATACT | + |
|
Preference number: 4 (lower is better) Translates to: RPFQKMKDSSHSHVGFFNPAGLL*PRSPHT Trigger: AGTATGAGGAGAGCGTGGCCAAAGAAGACCAGCCGG...GTTGAAGAAACCAACATGGCTGTGACTACTGTCTTTCATCTTTTGAAAAGGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CCA 90 bp | ATTTCCAAAAGTACAAACAGCATTATGACCTTACATGCAGACTCACCAACCTGCACGGGCACAAGCATCTaGTTGCTGGTGATCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISKSTNSIMTLHADSPTCTGTSI*LLVIWP Trigger: TGGCCAGATCACCAGCAACCAGATGCTTGTGCCCGT...GCAGGTTGGTGAGTCTGCATGTAAGGTCATAATGCTGTTTGTACTTTTGGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| 3UTR CAA 72 bp | TCGTACTTTAAGCTGGTGACAGCTGCTTTGTGTCCATaGAAGGTTATGTTTCCTTCACCACTGAGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SYFKLVTAALCP*KVMFPSPLRRL Trigger: CAGCCTCCTCAGTGGTGAAGGAAACATAACCTTCAATGGACACAAAGCAGCTGTCACCAGCTTAAAGTACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125059.6 ENSMUST00000197602.2 |
||
| CDS-3UTR GCA 90 bp | GGTATTTTTATGTTGCCAACTCCACAACAGCTCAGTTTATGTGTACGCTCCTTTTTCACAGGCGGGTACTaGCACATAGCGTCCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GIFMLPTPQQLSLCVRSFFTGGY*HIASFL Trigger: GAGAAAGGACGCTATGTGGCAGTACCCGCCTGTGAA...AAAGGAGCGTACACATAAACTGAGCTGTTGTGGAGTTGGCAACATAAAAATACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR GCA 90 bp | TGCCAACTCCACAACAGCTCAGTTTATGTGTACGCTCCTTTGAGAAGAAGCAGGCATGGGAGATGTCCATaGATAAAACAGGCAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CQLHNSSVYVYAPLRRSRHGRCP*IKQAVC Trigger: ACAAACTGCCTGTTTTATGCATGGACATCTCCCATG...CCTGCTTCTTCTCAAAGGAGCGTACACATAAACTGAGCTGTTGTGGAGTTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR GCA 90 bp | GCGCTTCCTTTAGAGGACAATGACACACACGGTAAACAGAAAAGCTCTAATACATTGTCTGCATCCCACTaGTTGATCTTGTGGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALPLEDNDTHGKQKSSNTLSASH*LILWSF Trigger: GAAGGACCACAAGATCAAGCAGTGGGATGCAGACAA...TGTATTAGAGCTTTTCTGTTTACCGTGTGTGTCATTGTCCTCTAAAGGAAGCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CCA 90 bp | TATGTTTCCTTCACCACTGAGGAGGCTGAAGATTCGGATGGCTCCATCCTCATAACAATGTTACCTTTTTaGCTGCCAATCAAGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YVSFTTEEAEDSDGSILITMLPF*LPIKPK Trigger: CTTTGGCTTGATTGGCAGCCAAAAAGGTAACATTGT...TATGAGGATGGAGCCATCCGAATCTTCAGCCTCCTCAGTGGTGAAGGAAACATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000125059.6 ENSMUST00000197602.2 |
||
| CDS-3UTR CCA 90 bp | CAGCAGATTCCTTTCTCGGAGAAACAAAGCTTGTGTGACAGCATCCTTGTGTCCACAATGTTACCTTTTTaGCTGCCAATCAAGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QQIPFSEKQSLCDSILVSTMLPF*LPIKPK Trigger: CTTTGGCTTGATTGGCAGCCAAAAAGGTAACATTGT...GGACACAAGGATGCTGTCACACAAGCTTTGTTTCTCCGAGAAAGGAATCTGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000125059.6 ENSMUST00000197602.2 |
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| CDS-3UTR CCA 90 bp | GGTATTTTTATGTTGCCAACTCCACAACAGCTCAGTTTATGTGTACGCTCCTTTGTTTTGAAGCAGTGCTaGTTATCCAGGTCCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: GIFMLPTPQQLSLCVRSFVLKQC*LSRSHH Trigger: GTGGTGGGACCTGGATAACCAGCACTGCTTCAAAAC...AAAGGAGCGTACACATAAACTGAGCTGTTGTGGAGTTGGCAACATAAAAATACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR GCA 90 bp | ATTTCCAAAAGTACAAACAGCATTATGACCTTACATGCAGACTCACCAACCTGCTCCAGCGTTTGGATGTaGTCAAACTTGTCTGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: ISKSTNSIMTLHADSPTCSSVWM*SNLSAS Trigger: GGATGCAGACAAGTTTGAGCACATCCAAACGCTGGA...GCAGGTTGGTGAGTCTGCATGTAAGGTCATAATGCTGTTTGTACTTTTGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR GCA 90 bp | CGTCCTTTTCAAAAGATGAAAGACAGTAGTCACAGCCATGTTGGTTTCTTCAACGCTCTCCTCATACTCTaGTTCCCTTTGCATTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RPFQKMKDSSHSHVGFFNALLIL*FPLHFP Trigger: AGGGAAATGCAAAGGGAAGCAGAGTATGAGGAGAGC...GTTGAAGAAACCAACATGGCTGTGACTACTGTCTTTCATCTTTTGAAAAGGACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR GCA 90 bp | GCGCTTCCTTTAGAGGACAATGACACACACGGTAAACAGAAAAGCTCTAATACACTGAAGGAGAAATATTaGCATGAGCCATCAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ALPLEDNDTHGKQKSSNTLKEKY*HEPSGW Trigger: CCATCCTGATGGCTCATGGCAATATTTCTCCTTCAG...TGTATTAGAGCTTTTCTGTTTACCGTGTGTGTCATTGTCCTCTAAAGGAAGCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR CCA 90 bp | ATTTCCAAAAGTACAAACAGCATTATGACCTTACATGCAGACTCACCAACCTGCTTCCTTCCCGCATTATaGAGCCAGCTTTACTACACG | + |
|
Preference number: 4 (lower is better) Translates to: ISKSTNSIMTLHADSPTCFLPAL*SQLYYT Trigger: CGTGTAGTAAAGCTGGCTCCATAATGCGGGAAGGAA...GCAGGTTGGTGAGTCTGCATGTAAGGTCATAATGCTGTTTGTACTTTTGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR TCA 90 bp | GGTATTTTTATGTTGCCAACTCCACAACAGCTCAGTTTATGTGTACGCTCCTTTTTCCAGGACACTCTTTaGTTTTCTTGGGCTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GIFMLPTPQQLSLCVRSFFQDTL*FSWALV Trigger: AACCAGAGCCCAAGAAAATCAAAGAGTGTCCTGGAA...AAAGGAGCGTACACATAAACTGAGCTGTTGTGGAGTTGGCAACATAAAAATACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR TCA 90 bp | ATTTCCAAAAGTACAAACAGCATTATGACCTTACATGCAGACTCACCAACCTGCCTTGTCATGAGATGCTaGTACAACGTAGTCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: ISKSTNSIMTLHADSPTCLVMRC*YNVVST Trigger: AGTGGAGACTACGTTGTATCAGCATCTCATGACAAG...GCAGGTTGGTGAGTCTGCATGTAAGGTCATAATGCTGTTTGTACTTTTGGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR CCA 90 bp | GCGCTTCCTTTAGAGGACAATGACACACACGGTAAACAGAAAAGCTCTAATACAGATTTTCTTGGGCTCTaGTTCTTCTGGGTCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ALPLEDNDTHGKQKSSNTDFLGL*FFWVIN Trigger: ATTGATGACCCAGAAGAACCAGAGCCCAAGAAAATC...TGTATTAGAGCTTTTCTGTTTACCGTGTGTGTCATTGTCCTCTAAAGGAAGCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR TCA 90 bp | GGTATTTTTATGTTGCCAACTCCACAACAGCTCAGTTTATGTGTACGCTCCTTTCTGCTTTGTGTCCATTaGAGGTTATGTTTCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GIFMLPTPQQLSLCVRSFLLCVH*RLCFLH Trigger: GTGAAGGAAACATAACCTTCAATGGACACAAAGCAG...AAAGGAGCGTACACATAAACTGAGCTGTTGTGGAGTTGGCAACATAAAAATACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS-3UTR GCA 90 bp | ATTTCCAAAAGTACAAACAGCATTATGACCTTACATGCAGACTCACCAACCTGCTGTTACCTTTTTGGCTaGCAATCAAGCCAAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: ISKSTNSIMTLHADSPTCCYLFG*QSSQRQ Trigger: CTGTCTTTGGCTTGATTGGCAGCCAAAAAGGTAACA...GCAGGTTGGTGAGTCTGCATGTAAGGTCATAATGCTGTTTGTACTTTTGGAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR GCA 90 bp | GGTATTTTTATGTTGCCAACTCCACAACAGCTCAGTTTATGTGTACGCTCCTTTGGCAGAGTTCAACCTTaGTTTCTTTCTAGCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GIFMLPTPQQLSLCVRSFGRVQP*FLSSFL Trigger: AAGAAAGCTAGAAAGAAAGCAAGGTTGAACTCTGCC...AAAGGAGCGTACACATAAACTGAGCTGTTGTGGAGTTGGCAACATAAAAATACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CAA 90 bp | GTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGGCCGGCTGGTCTTCTTaGGCCACGCTCTCCTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: VSRQLLAGHHPFQPQSMAAGWSS*ATLSSY Trigger: GTATGAGGAGAGCGTGGCCAAAGAAGACCAGCCGGC...CGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS CCA 90 bp | GTGGCCTCCAATGGTGATCCGGCTTGTCCTCACAGGCTGAGGGGCTaGCAAGGACGCATTGAGCGAATACAACTCCACCAGATTGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VASNGDPACPHRLRG*QGRIERIQLHQIVL Trigger: CAGAACAATCTGGTGGAGTTGTATTCGCTCAATGCGTCCTTGCCAGCCCCTCAGCCTGTGAGGACAAGCCGGATCACCATTGGAGGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CAA 90 bp | GCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCTTCCTTTAGAGGCACAAGCATCTGGTaGCTGGTGATCTGGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ALSRPSSLSAPVHGASFRGTSIW*LVIWPK Trigger: CTTTGGCCAGATCACCAGCAACCAGATGCTTGTGCC...TCTAAAGGAAGCGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS GCA 90 bp | CTTCTTCCCAGTGAAATAGTTGTCACCTTGGGTCTCCCCTGGAACTaGCGGCTGGTCTTCTTTGGCCACGCTCTCCTCATACTCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLPSEIVVTLGLPWN*RLVFFGHALLILCF Trigger: GAAGCAGAGTATGAGGAGAGCGTGGCCAAAGAAGACCAGCCGGCAGTTCCAGGGGAGACCCAAGGTGACAACTATTTCACTGGGAAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS CCA 90 bp | AGTTGTCACCTTGGGTCTCCCCTGGAACTGCCGGCTGGTCTTCTTTaGCCACGCTCTCCTCATACTCTGCTTCCCTTTGCATTTCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SCHLGSPLELPAGLL*PRSPHTLLPFAFPF Trigger: AAAGGGAAATGCAAAGGGAAGCAGAGTATGAGGAGAGCGTGGCCAAAGAAGACCAGCCGGCAGTTCCAGGGGAGACCCAAGGTGACAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CAA 90 bp | GCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCTTCCTTTAGAGTGTCCCTCCAGCGTTaGGATGTGCTCAAACTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ALSRPSSLSAPVHGASFRVSLQR*DVLKLV Trigger: GACAAGTTTGAGCACATCCAAACGCTGGAGGGACAC...TCTAAAGGAAGCGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS GCA 90 bp | TTCCTGGTGGTGTCCCTCCAGCGTTTGGATGTGCTCAAACTTGTCTaGATCCCACTGCTTGATCTTGTGGTCCTTCCCAGCGGTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FLVVSLQRLDVLKLV*IPLLDLVVLPSGEE Trigger: TTCTTCACCGCTGGGAAGGACCACAAGATCAAGCAGTGGGATGCAGACAAGTTTGAGCACATCCAAACGCTGGAGGGACACCACCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CAA 90 bp | GCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCTTCCTTTAGAGCAGAAGTCTTGATCTaGGCTACTCGAAGGATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: ALSRPSSLSAPVHGASFRAEVLI*ATRRIS Trigger: CGAGATCCTTCGAGTAGCCAAGATCAAGACTTCTGC...TCTAAAGGAAGCGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CAA 90 bp | AACCTGCACTGGTGTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCTGGATGTGCTCAAACTaGTCTGCATCCCACTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NLHWCKQAALSRPSSLSAWMCSN*SASHCL Trigger: CAAGCAGTGGGATGCAGACAAGTTTGAGCACATCCA...GGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTACACCAGTGCAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS TCA 90 bp | CTGAGGCCAGGTCGTAAAGTTGCAGATTTCCTGTCTTTGTTCCTATaGCCACCTGCCTATCGCCGGGAACGAAGAAGGAGCAGAGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LRPGRKVADFLSLFL*PPAYRRERRRSREH Trigger: ATGCTCTCTGCTCCTTCTTCGTTCCCGGCGATAGGCAGGTGGTCATAGGAACAAAGACAGGAAATCTGCAACTTTACGACCTGGCCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS TCA 90 bp | AGTCCAGCAAAGACACAGCCAGCAGCTTTTGATTGGGAGAGTAGCTaGCACACAGGACGTCCTCATCTAGCTGCAAGGTTCGAGTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPAKTQPAAFDWESS*HTGRPHLAARFESA Trigger: AGCAGACTCGAACCTTGCAGCTAGATGAGGACGTCCTGTGTGTCAGCTACTCTCCCAATCAAAAGCTGCTGGCTGTGTCTTTGCTGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS TCA 90 bp | GCGACTTGTCATGAGATGCTGATACAACGTAGTCTCCACTGGGGCTaGCAGCCAAACACCATATTTCCTGGTGGTGTCCCTCCAGCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ATCHEMLIQRSLHWG*QPNTIFPGGVPPAF Trigger: AAACGCTGGAGGGACACCACCAGGAAATATGGTGTTTGGCTGTCAGCCCCAGTGGAGACTACGTTGTATCAGCATCTCATGACAAGTCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS GCA 90 bp | TGGACCACAGGGCTCCATCATGGGCAGCTATTGTCTCCAAGAGAGTaGCTGAGGCCAGGTCGTAAAGTTGCAGATTTCCTGTCTTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: WTTGLHHGQLLSPRE*LRPGRKVADFLSLF Trigger: GAACAAAGACAGGAAATCTGCAACTTTACGACCTGGCCTCAGGCACTCTCTTGGAGACAATAGCTGCCCATGATGGAGCCCTGTGGTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS CCA 90 bp | AATTGTCTTCTTCCCAGTGAAATAGTTGTCACCTTGGGTCTCCCCTaGAACTGCCGGCTGGTCTTCTTTGGCCACGCTCTCCTCATACTC | + |
|
Preference number: 5 (lower is better) Translates to: NCLLPSEIVVTLGLP*NCRLVFFGHALLIL Trigger: GAGTATGAGGAGAGCGTGGCCAAAGAAGACCAGCCGGCAGTTCCAGGGGAGACCCAAGGTGACAACTATTTCACTGGGAAGAAGACAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CAA 90 bp | TGGTGTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATATCTTGGCAGAAGTCTaGATCTTGGCTACTCGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WCKQAALSRPSSLSAPVHILAEV*ILATRR Trigger: CCTTCGAGTAGCCAAGATCAAGACTTCTGCCAAGAT...ATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTACACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CAA 90 bp | TTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCTTCCTTTAGAGGACTACAACTCCACCAGATaGTTCTGCAGCAAGAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: LAGHHPFQPQSMALPLEDYNSTR*FCSKKT Trigger: CGTCTTCTTGCTGCAGAACAATCTGGTGGAGTTGTA...GTCCTCTAAAGGAAGCGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS TCA 90 bp | CCACAGGGCTCCATCATGGGCAGCTATTGTCTCCAAGAGAGTGCCTaGGGCCAGGTCGTAAAGTTGCAGATTTCCTGTCTTTGTTCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: PQGSIMGSYCLQESA*GQVVKLQISCLCSY Trigger: ATAGGAACAAAGACAGGAAATCTGCAACTTTACGACCTGGCCTCAGGCACTCTCTTGGAGACAATAGCTGCCCATGATGGAGCCCTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS TCA 90 bp | CTCTCTCGTTCTCTCCCAGAGTCTCAGCGACTTGTCATGAGATGCTaGTACAACGTAGTCTCCACTGGGGCTGACAGCCAAACACCATAT | + |
|
Preference number: 5 (lower is better) Translates to: LSRSLPESQRLVMRC*YNVVSTGADSQTPY Trigger: ATATGGTGTTTGGCTGTCAGCCCCAGTGGAGACTACGTTGTATCAGCATCTCATGACAAGTCGCTGAGACTCTGGGAGAGAACGAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS GCA 90 bp | AAGCCCCACACCTCAGTTCGGTGGCCAACCATTGTTTTGAAGCAGTaGTGGTTATCCAGGTCCCACCACTTTACCATAGTGTCTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KPHTSVRWPTIVLKQ*WLSRSHHFTIVSFP Trigger: TGGGAAAGACACTATGGTAAAGTGGTGGGACCTGGATAACCAGCACTGCTTCAAAACAATGGTTGGCCACCGAACTGAGGTGTGGGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS GCA 90 bp | ATCTTGGCAGAAGTCTTGATCTTGGCTACTCGAAGGATCTCGTCCTaGAGTGTCATCGAGACACTCGTTTCAGGGTCCTCCTCCTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: ILAEVLILATRRISS*SVIETLVSGSSSSL Trigger: CAATGAGGAGGAGGACCCTGAAACGAGTGTCTCGATGACACTGCAGGACGAGATCCTTCGAGTAGCCAAGATCAAGACTTCTGCCAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS CCA 90 bp | CCCCACACCTCAGTTCGGTGGCCAACCATTGTTTTGAAGCAGTGCTaGTTATCCAGGTCCCACCACTTTACCATAGTGTCTTTCCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: PHTSVRWPTIVLKQC*LSRSHHFTIVSFPL Trigger: AAGTGGGAAAGACACTATGGTAAAGTGGTGGGACCTGGATAACCAGCACTGCTTCAAAACAATGGTTGGCCACCGAACTGAGGTGTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CAA 90 bp | TGGTGTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATATTCCAGGACACTCTTaGATTTTCTTGGGCTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: WCKQAALSRPSSLSAPVHIPGHS*IFLGSG Trigger: ACCAGAGCCCAAGAAAATCAAAGAGTGTCCTGGAAT...ATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTACACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CAA 90 bp | TGCCAACTCCACAACAGCTCAGTTTATGTGTACGCTCCTTTGAGAAGAAGCAGGAGAATCCTGCCTGTCTaGTCCACGGCGAGGTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: CQLHNSSVYVYAPLRRSRRILPV*STARFT Trigger: TGTGAACCTCGCCGTGGACAAGACAGGCAGGATTCT...CCTGCTTCTTCTCAAAGGAGCGTACACATAAACTGAGCTGTTGTGGAGTTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CAA 90 bp | CACTGGTGTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCTATCAGCAGAACCAGTaGCTATTAGTGCTCCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: HWCKQAALSRPSSLSAPVYQQNQ*LLVLHH Trigger: ATGATGGAGCACTAATAGCAACTGGTTCTGCTGATA...GACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTACACCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CAA 90 bp | GTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGGTCTGGATGAATTCATaGAACAGTGTAAGAACGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSRQLLAGHHPFQPQSMAVWMNS*NSVRTS Trigger: AGACGTTCTTACACTGTTCAATGAATTCATCCAGAC...CGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS TCA 90 bp | CTGCAGGGTAGACCTGTTCCAGATCTTAATGGAATCGGCTGCTGCTaGAAGCACAGCTATATTATCCGAGCTGAAGGACAAAGTGCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LQGRPVPDLNGIGCC*KHSYIIRAEGQSAH Trigger: GTGCGCACTTTGTCCTTCAGCTCGGATAATATAGCTGTGCTTTCAGCAGCAGCCGATTCCATTAAGATCTGGAACAGGTCTACCCTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CAA 90 bp | CACTGGTGTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCAACAATGTTACCTTTTaGGCTGCCAATCAAGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HWCKQAALSRPSSLSAPVNNVTF*AANQAK Trigger: TTTGGCTTGATTGGCAGCCAAAAAGGTAACATTGTT...GACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTACACCAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CAA 90 bp | TGGTGTAAGCAGGCAGCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATCAAGCAAGTGACTTCTaGTTTATTCCCCTGAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: WCKQAALSRPSSLSAPVHQASDF*FIPLKD Trigger: ATCCTTCAGGGGAATAAACAAGAAGTCACTTGCTTG...ATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGCTGCCTGCTTACACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CAA 90 bp | TTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCTTCCTTTAGAGGACGCTGCTTTGTGTCCATaGAAGGTTATGTTTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LAGHHPFQPQSMALPLEDAALCP*KVMFPS Trigger: TGAAGGAAACATAACCTTCAATGGACACAAAGCAGC...GTCCTCTAAAGGAAGCGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CAA 90 bp | GCTCTTAGCAGGCCATCATCCCTTTCAGCCCCAGTCCATGGCGCTTCCTTTAGACATAAAACAGGCAGTTaGTGTCCATACAGTGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALSRPSSLSAPVHGASFRHKTGS*CPYSER Trigger: TCTCTCACTGTATGGACACAAACTGCCTGTTTTATG...TCTAAAGGAAGCGCCATGGACTGGGGCTGAAAGGGATGATGGCCTGCTAAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS TCA 90 bp | TCCCACTGCTTGATCTTGTGGTCCTTCCCAGCGGTGAAGAAGAGGTaGGACTTAGGCACAAAGCGTAGATACATCACACTGTCATCATGT | + |
|
Preference number: 5 (lower is better) Translates to: SHCLILWSFPAVKKR*DLGTKRRYITLSSC Trigger: ACATGATGACAGTGTGATGTATCTACGCTTTGTGCCTAAGTCTCACCTCTTCTTCACCGCTGGGAAGGACCACAAGATCAAGCAGTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS GCA 90 bp | AAAATACTTCTAACACAGAATCAGTTCCGTGGCAAGCAAGAATCCTaGCTGTCTTGTCCACGGCGAGGTTCACAACTCTGTCCCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KILLTQNQFRGKQES*LSCPRRGSQLCPFL Trigger: AAGGAAGGGACAGAGTTGTGAACCTCGCCGTGGACAAGACAGGCAGGATTCTTGCTTGCCACGGAACTGATTCTGTGTTAGAAGTATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CAA 90 bp | TCCTTCACCACTGAGGAGGCTGAAGATTCGGATGGCTCCATCCTCATAGCCAACAACAATGTTACCTTTTaGGCTGCCAATCAAGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SFTTEEAEDSDGSILIANNNVTF*AANQAK Trigger: TTTGGCTTGATTGGCAGCCAAAAAGGTAACATTGTT...GTTGGCTATGAGGATGGAGCCATCCGAATCTTCAGCCTCCTCAGTGGTGAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125059.6 ENSMUST00000197602.2 |
||
| CDS-3UTR CAA 90 bp | TGCCAACTCCACAACAGCTCAGTTTATGTGTACGCTCCTTTGAGAAGAAGCAGGTCAAAATCCCAGAACTaGACAGCTTTGTCAGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CQLHNSSVYVYAPLRRSRSKSQN*TALSAP Trigger: TGGCGCTGACAAAGCTGTCAAGTTCTGGGATTTTGA...CCTGCTTCTTCTCAAAGGAGCGTACACATAAACTGAGCTGTTGTGGAGTTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CAA 90 bp | ATTTCCAAAAGTACAAACAGCATTATGACCTTACATGCAGACTCACCAACCTGCTCCCACTGCTTGATCTaGTGGTCCTTCCCAGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ISKSTNSIMTLHADSPTCSHCLI*WSFPAV Trigger: CACCGCTGGGAAGGACCACAAGATCAAGCAGTGGGA...GCAGGTTGGTGAGTCTGCATGTAAGGTCATAATGCTGTTTGTACTTTTGGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS GCA 90 bp | ACGAAAGTATGCGATCTTCAGATTTTTCATCATCCGCCTCAAGGGTaGTGTCCTCTGATTCAGGTGTGTCCTGTATTCCAGGACACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TKVCDLQIFHHPPQG*CPLIQVCPVFQDTL Trigger: AAGAGTGTCCTGGAATACAGGACACACCTGAATCAGAGGACAGCACCCTTGAGGCGGATGATGAAAAATCTGAAGATCGCATACTTTCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CAA 90 bp | GCGCTTCCTTTAGAGGACAATGACACACACGGTAAACAGAAAAGCTCTAATACATCGAGACCAGCCATATaGAAGCCAATGGCATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ALPLEDNDTHGKQKSSNTSRPAI*KPMASW Trigger: CCAGGATGCCATTGGCTTCAATATGGCTGGTCTCGA...TGTATTAGAGCTTTTCTGTTTACCGTGTGTGTCATTGTCCTCTAAAGGAAGCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS CCA 90 bp | GCTTTGGAAAGAATACAAAATACTTCTAACACAGAATCAGTTCCGTaGCAAGCAAGAATCCTGCCTGTCTTGTCCACGGCGAGGTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: ALERIQNTSNTESVP*QARILPVLSTARFT Trigger: TGTGAACCTCGCCGTGGACAAGACAGGCAGGATTCTTGCTTGCCACGGAACTGATTCTGTGTTAGAAGTATTTTGTATTCTTTCCAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CAA 90 bp | CGTCCTTTTCAAAAGATGAAAGACAGTAGTCACAGCCATGTTGGTTTCTTCAACCAGAACTTGACAGCTTaGTCAGCGCCACCTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: RPFQKMKDSSHSHVGFFNQNLTA*SAPPVT Trigger: TGTGACAGGTGGCGCTGACAAAGCTGTCAAGTTCTG...GTTGAAGAAACCAACATGGCTGTGACTACTGTCTTTCATCTTTTGAAAAGGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CAA 90 bp | CGTCCTTTTCAAAAGATGAAAGACAGTAGTCACAGCCATGTTGGTTTCTTCAACCACAGCCAGCAGCTTTaGATTGGGAGAGTAGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RPFQKMKDSSHSHVGFFNHSQQL*IGRVAD Trigger: GTCAGCTACTCTCCCAATCAAAAGCTGCTGGCTGTG...GTTGAAGAAACCAACATGGCTGTGACTACTGTCTTTCATCTTTTGAAAAGGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CAA 90 bp | ATTTCCAAAAGTACAAACAGCATTATGACCTTACATGCAGACTCACCAACCTGCATACTCTGCTTCCCTTaGCATTTCCCTTTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ISKSTNSIMTLHADSPTCILCFP*HFPFFL Trigger: GAGGAAGAAAGGGAAATGCAAAGGGAAGCAGAGTAT...GCAGGTTGGTGAGTCTGCATGTAAGGTCATAATGCTGTTTGTACTTTTGGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS-3UTR CAA 90 bp | TCGTACTTTAAGCTGGTGACAGCTGCTTTGTGTCCATTGAAGGTTATGTTTCCTAACAATGTTACCTTTTaGGCTGCCAATCAAGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SYFKLVTAALCPLKVMFPNNVTF*AANQAK Trigger: TTTGGCTTGATTGGCAGCCAAAAAGGTAACATTGTT...AGGAAACATAACCTTCAATGGACACAAAGCAGCTGTCACCAGCTTAAAGTACGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125059.6 ENSMUST00000197602.2 |
||
| CDS TCA 72 bp | ACAAAGTGCGCACGTCGCTGCGGTGGCCTCCAATGGTaGTCCGGCTTGTCCTCACAGGCTGAGGGGCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: TKCARRCGGLQW*SGLSSQAEGLA Trigger: TGCCAGCCCCTCAGCCTGTGAGGACAAGCCGGATCACCATTGGAGGCCACCGCAGCGACGTGCGCACTTTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS CCA 72 bp | TCCGAGCTGAAGGACAAAGTGCGCACGTCGCTGCGGTaGCCTCCAATGGTGATCCGGCTTGTCCTCACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SELKDKVRTSLR*PPMVIRLVLTG Trigger: GCCTGTGAGGACAAGCCGGATCACCATTGGAGGCCACCGCAGCGACGTGCGCACTTTGTCCTTCAGCTCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS CAA 72 bp | CCTTGGGTCTCCCCTGGAACTGCCGGCTGGTCTTCTTaGGCCACGCTCTCCTCATACTCTGCTTCCCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PWVSPGTAGWSS*ATLSSYSASLC Trigger: GCAAAGGGAAGCAGAGTATGAGGAGAGCGTGGCCAAAGAAGACCAGCCGGCAGTTCCAGGGGAGACCCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS TCA 72 bp | CGGCTGCTGCTGAAAGCACAGCTATATTATCCGAGCTaGAGGACAAAGTGCGCACGTCGCTGCGGTGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RLLLKAQLYYPS*RTKCARRCGGL Trigger: GAGGCCACCGCAGCGACGTGCGCACTTTGTCCTTCAGCTCGGATAATATAGCTGTGCTTTCAGCAGCAGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS CCA 72 bp | AATGGTGATCCGGCTTGTCCTCACAGGCTGAGGGGCTaGCAAGGACGCATTGAGCGAATACAACTCCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: NGDPACPHRLRG*QGRIERIQLHQ Trigger: CTGGTGGAGTTGTATTCGCTCAATGCGTCCTTGCCAGCCCCTCAGCCTGTGAGGACAAGCCGGATCACCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS CCA 72 bp | CTTCCCAGTGAAATAGTTGTCACCTTGGGTCTCCCCTaGAACTGCCGGCTGGTCTTCTTTGGCCACGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LPSEIVVTLGLP*NCRLVFFGHAL Trigger: GAGAGCGTGGCCAAAGAAGACCAGCCGGCAGTTCCAGGGGAGACCCAAGGTGACAACTATTTCACTGGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS CCA 72 bp | TCTGGAGAAAGAGACATGGACCACAGGGCTCCATCATaGGCAGCTATTGTCTCCAAGAGAGTGCCTGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGERDMDHRAPS*AAIVSKRVPEA Trigger: GGCCTCAGGCACTCTCTTGGAGACAATAGCTGCCCATGATGGAGCCCTGTGGTCCATGTCTCTTTCTCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS CAA 72 bp | GAGACATGGACCACAGGGCTCCATCATGGGCAGCTATaGTCTCCAAGAGAGTGCCTGAGGCCAGGTCGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: ETWTTGLHHGQL*SPRECLRPGRK Trigger: TTTACGACCTGGCCTCAGGCACTCTCTTGGAGACAATAGCTGCCCATGATGGAGCCCTGTGGTCCATGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS TCA 72 bp | TTGTCCTCACAGGCTGAGGGGCTGGCAAGGACGCATTaGGCGAATACAACTCCACCAGATTGTTCTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LSSQAEGLARTH*ANTTPPDCSAA Trigger: TGCTGCAGAACAATCTGGTGGAGTTGTATTCGCTCAATGCGTCCTTGCCAGCCCCTCAGCCTGTGAGGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS GCA 72 bp | GGGCTCCATCATGGGCAGCTATTGTCTCCAAGAGAGTaGCTGAGGCCAGGTCGTAAAGTTGCAGATTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GLHHGQLLSPRE*LRPGRKVADFL Trigger: CAGGAAATCTGCAACTTTACGACCTGGCCTCAGGCACTCTCTTGGAGACAATAGCTGCCCATGATGGAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS GCA 72 bp | GTGTCCCTCCAGCGTTTGGATGTGCTCAAACTTGTCTaGATCCCACTGCTTGATCTTGTGGTCCTTCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VSLQRLDVLKLV*IPLLDLVVLPS Trigger: GCTGGGAAGGACCACAAGATCAAGCAGTGGGATGCAGACAAGTTTGAGCACATCCAAACGCTGGAGGGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS GCA 72 bp | AGTGAAATAGTTGTCACCTTGGGTCTCCCCTGGAACTaGCGGCTGGTCTTCTTTGGCCACGCTCTCCTCATA | + |
|
Preference number: 6 (lower is better) Translates to: SEIVVTLGLPWN*RLVFFGHALLI Trigger: TATGAGGAGAGCGTGGCCAAAGAAGACCAGCCGGCAGTTCCAGGGGAGACCCAAGGTGACAACTATTTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS CAA 72 bp | GAATCAGTTCCGTGGCAAGCAAGAATCCTGCCTGTCTaGTCCACGGCGAGGTTCACAACTCTGTCCCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ESVPWQARILPV*STARFTTLSLP Trigger: AGGAAGGGACAGAGTTGTGAACCTCGCCGTGGACAAGACAGGCAGGATTCTTGCTTGCCACGGAACTGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS CAA 90 bp | CTGGAGAAAGAGACATGGACCACAGGGCTCCATCATGGGCAGCTATaGTCTCCAAGAGAGTGCCTGAGGCCAGGTCGTAAAGTTGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LEKETWTTGLHHGQL*SPRECLRPGRKVAD Trigger: ATCTGCAACTTTACGACCTGGCCTCAGGCACTCTCTTGGAGACAATAGCTGCCCATGATGGAGCCCTGTGGTCCATGTCTCTTTCTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS TCA 72 bp | AGCCCCACACCTCAGTTCGGTGGCCAACCATTGTTTTaGAGCAGTGCTGGTTATCCAGGTCCCACCACTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SPTPQFGGQPLF*SSAGYPGPTTL Trigger: TAAAGTGGTGGGACCTGGATAACCAGCACTGCTTCAAAACAATGGTTGGCCACCGAACTGAGGTGTGGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS TCA 72 bp | TCTCTCCCAGAGTCTCAGCGACTTGTCATGAGATGCTaGTACAACGTAGTCTCCACTGGGGCTGACAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SLPESQRLVMRC*YNVVSTGADSQ Trigger: TTGGCTGTCAGCCCCAGTGGAGACTACGTTGTATCAGCATCTCATGACAAGTCGCTGAGACTCTGGGAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS CCA 72 bp | AGGCACCGGCACAAGAGCTCGACATCCAAGCCCGTCTaGATGAATTCATTGAACAGTGTAAGAACGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RHRHKSSTSKPV*MNSLNSVRTSG Trigger: CCCAGACGTTCTTACACTGTTCAATGAATTCATCCAGACGGGCTTGGATGTCGAGCTCTTGTGCCGGTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS CAA 90 bp | TCTAACACAGAATCAGTTCCGTGGCAAGCAAGAATCCTGCCTGTCTaGTCCACGGCGAGGTTCACAACTCTGTCCCTTCCTTCCCGCATT | + |
|
Preference number: 6 (lower is better) Translates to: SNTESVPWQARILPV*STARFTTLSLPSRI Trigger: AATGCGGGAAGGAAGGGACAGAGTTGTGAACCTCGCCGTGGACAAGACAGGCAGGATTCTTGCTTGCCACGGAACTGATTCTGTGTTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS TCA 72 bp | AAGACACAGCCAGCAGCTTTTGATTGGGAGAGTAGCTaGCACACAGGACGTCCTCATCTAGCTGCAAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: KTQPAAFDWESS*HTGRPHLAARF Trigger: GAACCTTGCAGCTAGATGAGGACGTCCTGTGTGTCAGCTACTCTCCCAATCAAAAGCTGCTGGCTGTGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
||
| CDS TCA 72 bp | CATGAGATGCTGATACAACGTAGTCTCCACTGGGGCTaGCAGCCAAACACCATATTTCCTGGTGGTGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: HEMLIQRSLHWG*QPNTIFPGGVP Trigger: AGGGACACCACCAGGAAATATGGTGTTTGGCTGTCAGCCCCAGTGGAGACTACGTTGTATCAGCATCTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS GCA 72 bp | CTAACACAGAATCAGTTCCGTGGCAAGCAAGAATCCTaGCTGTCTTGTCCACGGCGAGGTTCACAACTCTGT | + |
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Preference number: 6 (lower is better) Translates to: LTQNQFRGKQES*LSCPRRGSQLC Trigger: ACAGAGTTGTGAACCTCGCCGTGGACAAGACAGGCAGGATTCTTGCTTGCCACGGAACTGATTCTGTGTTAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS GCA 72 bp | AGCGTTTGGATGTGCTCAAACTTGTCTGCATCCCACTaGTTGATCTTGTGGTCCTTCCCAGCGGTGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SVWMCSNLSASH*LILWSFPAVKK Trigger: CTTCTTCACCGCTGGGAAGGACCACAAGATCAAGCAGTGGGATGCAGACAAGTTTGAGCACATCCAAACGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS CCA 72 bp | TCTGAAACCAGAACCAAGCCCCACACCTCAGTTCGGTaGCCAACCATTGTTTTGAAGCAGTGCTGGTTATCC | + |
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Preference number: 6 (lower is better) Translates to: SETRTKPHTSVR*PTIVLKQCWLS Trigger: GGATAACCAGCACTGCTTCAAAACAATGGTTGGCCACCGAACTGAGGTGTGGGGCTTGGTTCTGGTTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS CAA 72 bp | GTTTGGATGTGCTCAAACTTGTCTGCATCCCACTGCTaGATCTTGTGGTCCTTCCCAGCGGTGAAGAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: VWMCSNLSASHC*ILWSFPAVKKR Trigger: CCTCTTCTTCACCGCTGGGAAGGACCACAAGATCAAGCAGTGGGATGCAGACAAGTTTGAGCACATCCAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS TCA 72 bp | TCCATCATGGGCAGCTATTGTCTCCAAGAGAGTGCCTaGGGCCAGGTCGTAAAGTTGCAGATTTCCTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: SIMGSYCLQESA*GQVVKLQISCL Trigger: AAGACAGGAAATCTGCAACTTTACGACCTGGCCTCAGGCACTCTCTTGGAGACAATAGCTGCCCATGATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS TCA 72 bp | AAGGAGAAATATTGCCATGAGCCATCAGGATGGGGTTaGCAGGAAGAGGAACCTCTTTCCCCGCTGCTTTAC | + |
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Preference number: 6 (lower is better) Translates to: KEKYCHEPSGWG*QEEEPLSPLLY Trigger: GTAAAGCAGCGGGGAAAGAGGTTCCTCTTCCTGTCAACCCCATCCTGATGGCTCATGGCAATATTTCTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS GCA 72 bp | ACCTCAGTTCGGTGGCCAACCATTGTTTTGAAGCAGTaGTGGTTATCCAGGTCCCACCACTTTACCATAGTG | + |
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Preference number: 6 (lower is better) Translates to: TSVRWPTIVLKQ*WLSRSHHFTIV Trigger: CACTATGGTAAAGTGGTGGGACCTGGATAACCAGCACTGCTTCAAAACAATGGTTGGCCACCGAACTGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS GCA 72 bp | CATATTTCCTGGTGGTGTCCCTCCAGCGTTTGGATGTaGTCAAACTTGTCTGCATCCCACTGCTTGATCTTG | + |
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Preference number: 6 (lower is better) Translates to: HISWWCPSSVWM*SNLSASHCLIL Trigger: CAAGATCAAGCAGTGGGATGCAGACAAGTTTGAGCACATCCAAACGCTGGAGGGACACCACCAGGAAATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS CAA 72 bp | TTTCTTGGGCTCTGGTTCTTCTGGGTCATCAATCTCTaGCAGATAGTCGATGTCCCAGGCTCTCAGCTCACT | + |
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Preference number: 6 (lower is better) Translates to: FLGLWFFWVINL*QIVDVPGSQLT Trigger: AGTGAGCTGAGAGCCTGGGACATCGACTATCTGCAAGAGATTGATGACCCAGAAGAACCAGAGCCCAAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS CAA 72 bp | GGCAAGGACGCATTGAGCGAATACAACTCCACCAGATaGTTCTGCAGCAAGAAGACGGCCTTTAACTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: GKDALSEYNSTR*FCSKKTAFNSP Trigger: AGGAGAGTTAAAGGCCGTCTTCTTGCTGCAGAACAATCTGGTGGAGTTGTATTCGCTCAATGCGTCCTTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS CAA 90 bp | GCGTCCTTTCTCACCACGGAGTGTCACAAAAACAATGTTACCTTTTaGGCTGCCAATCAAGCCAAAGACAGCACTAGCCACATAGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: ASFLTTECHKNNVTF*AANQAKDSTSHIAQ Trigger: CTGCGCTATGTGGCTAGTGCTGTCTTTGGCTTGATTGGCAGCCAAAAAGGTAACATTGTTTTTGTGACACTCCGTGGTGAGAAAGGACGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052120.14 ENSMUST00000125059.6 ENSMUST00000197602.2 |
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| CDS TCA 72 bp | TTGATCTTGTGGTCCTTCCCAGCGGTGAAGAAGAGGTaGGACTTAGGCACAAAGCGTAGATACATCACACTG | + |
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Preference number: 6 (lower is better) Translates to: LILWSFPAVKKR*DLGTKRRYITL Trigger: CAGTGTGATGTATCTACGCTTTGTGCCTAAGTCTCACCTCTTCTTCACCGCTGGGAAGGACCACAAGATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS TCA 72 bp | GTCTCTAACACATACGCTGAAGGAGAAATATTGCCATaGGCCATCAGGATGGGGTTGACAGGAAGAGGAACC | + |
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Preference number: 6 (lower is better) Translates to: VSNTYAEGEILP*AIRMGLTGRGT Trigger: GGTTCCTCTTCCTGTCAACCCCATCCTGATGGCTCATGGCAATATTTCTCCTTCAGCGTATGTGTTAGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS GCA 72 bp | CAGAGAGCATATTCACAAGGCATGGTGCGGATACACTaGAGGGTAGACCTGTTCCAGATCTTAATGGAATCG | + |
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Preference number: 6 (lower is better) Translates to: QRAYSQGMVRIH*RVDLFQILMES Trigger: CGATTCCATTAAGATCTGGAACAGGTCTACCCTGCAGTGTATCCGCACCATGCCTTGTGAATATGCTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS CCA 72 bp | TCAGTTCGGTGGCCAACCATTGTTTTGAAGCAGTGCTaGTTATCCAGGTCCCACCACTTTACCATAGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: SVRWPTIVLKQC*LSRSHHFTIVS Trigger: AGACACTATGGTAAAGTGGTGGGACCTGGATAACCAGCACTGCTTCAAAACAATGGTTGGCCACCGAACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS CAA 72 bp | GTCATCGAGACACTCGTTTCAGGGTCCTCCTCCTCATaGGCAGAGTTCAACCTTGCTTTCTTTCTAGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: VIETLVSGSSSS*AEFNLAFFLAF Trigger: GAAAGCTAGAAAGAAAGCAAGGTTGAACTCTGCCAATGAGGAGGAGGACCCTGAAACGAGTGTCTCGATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS CAA 72 bp | TTCAATTGTCTTCTTCCCAGTGAAATAGTTGTCACCTaGGGTCTCCCCTGGAACTGCCGGCTGGTCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: FNCLLPSEIVVT*GLPWNCRLVFF Trigger: AAAGAAGACCAGCCGGCAGTTCCAGGGGAGACCCAAGGTGACAACTATTTCACTGGGAAGAAGACAATTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS TCA 72 bp | AGATTTTTCATCATCCGCCTCAAGGGTGCTGTCCTCTaGTTCAGGTGTGTCCTGTATTCCAGGACACTCTTT | + |
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Preference number: 6 (lower is better) Translates to: RFFIIRLKGAVL*FRCVLYSRTLF Trigger: AAAGAGTGTCCTGGAATACAGGACACACCTGAATCAGAGGACAGCACCCTTGAGGCGGATGATGAAAAATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS CAA 72 bp | CTCACCACGGAGTGTCACAAAAACAATGTTACCTTTTaGGCTGCCAATCAAGCCAAAGACAGCACTAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LTTECHKNNVTF*AANQAKDSTSH Trigger: GTGGCTAGTGCTGTCTTTGGCTTGATTGGCAGCCAAAAAGGTAACATTGTTTTTGTGACACTCCGTGGTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052120.14 ENSMUST00000125059.6 ENSMUST00000197602.2 |
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| CDS GCA 72 bp | CACAGGACGTCCTCATCTAGCTGCAAGGTTCGAGTCTaGTTCACAGAAAGTCTCTTCTGGGTACTATTTTTA | + |
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Preference number: 6 (lower is better) Translates to: HRTSSSSCKVRV*FTESLFWVLFL Trigger: TAAAAATAGTACCCAGAAGAGACTTTCTGTGAAGCAGACTCGAACCTTGCAGCTAGATGAGGACGTCCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS CCA 72 bp | TCACCACGGAGTGTCACAAAAACAATGTTACCTTTTTaGCTGCCAATCAAGCCAAAGACAGCACTAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: SPRSVTKTMLPF*LPIKPKTALAT Trigger: TGTGGCTAGTGCTGTCTTTGGCTTGATTGGCAGCCAAAAAGGTAACATTGTTTTTGTGACACTCCGTGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000052120.14 ENSMUST00000125059.6 ENSMUST00000197602.2 |
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| CDS CAA 72 bp | AGGTCAAAAGATTTGATCTTGGCAGAAGTCTTGATCTaGGCTACTCGAAGGATCTCGTCCTGCAGTGTCATC | + |
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Preference number: 6 (lower is better) Translates to: RSKDLILAEVLI*ATRRISSCSVI Trigger: GATGACACTGCAGGACGAGATCCTTCGAGTAGCCAAGATCAAGACTTCTGCCAAGATCAAATCTTTTGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS CAA 72 bp | GACCCCAGATTTTCACATTTCTATCAGCAGAACCAGTaGCTATTAGTGCTCCATCATGGGAGATGTCCATGC | + |
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Preference number: 6 (lower is better) Translates to: DPRFSHFYQQNQ*LLVLHHGRCPC Trigger: GCATGGACATCTCCCATGATGGAGCACTAATAGCAACTGGTTCTGCTGATAGAAATGTGAAAATCTGGGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS TCA 72 bp | TATTTTTATCTGTCACCAACTCAAAATCCCAGAACTTaGCAGCTTTGTCAGCGCCACCTGTCACAAAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: YFYLSPTQNPRT*QLCQRHLSQSH Trigger: GTGGCTTTGTGACAGGTGGCGCTGACAAAGCTGTCAAGTTCTGGGATTTTGAGTTGGTGACAGATAAAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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| CDS CAA 72 bp | CTATTTTTATCTGTCACCAACTCAAAATCCCAGAACTaGACAGCTTTGTCAGCGCCACCTGTCACAAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LFLSVTNSKSQN*TALSAPPVTKP Trigger: TGGCTTTGTGACAGGTGGCGCTGACAAAGCTGTCAAGTTCTGGGATTTTGAGTTGGTGACAGATAAAAATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052120.14 |
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