Pregenerated sensors for WDR25 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040877Ensembl transcript IDs: ENSMUST00000047115.9, ENSMUST00000167816.8, ENSMUST00000220495.2, ENSMUST00000220667.2, ENSMUST00000221377.2, ENSMUST00000221510.2
Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGTTTCAAGGTCTGTTAGGTGCAGGGCAAAGTCGAAGCCACCACTaGGGATGCGCCGGCCACAGGGAGACCACCGTGCAGCCCTTACTG | + |
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Preference number: 1 (lower is better) Translates to: LFQGLLGAGQSRSHH*GCAGHRETTVQPLL Trigger: CAGTAAGGGCTGCACGGTGGTCTCCCTGTGGCCGGCGCATCCTCAGTGGTGGCTTCGACTTTGCCCTGCACCTAACAGACCTTGAAACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220495.2 |
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| 3UTR GCA 90 bp | TGTGCTTCTGAGTCCCTGCTTCTCCTCGCACTCCTTCAGGACAGATaGATAGCTTTGCCCACCACAGACCACCCACCTGGCAGTGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: CASESLLLLALLQDR*IALPTTDHPPGSGQ Trigger: CTGCCCACTGCCAGGTGGGTGGTCTGTGGTGGGCAAAGCTATGCATCTGTCCTGAAGGAGTGCGAGGAGAAGCAGGGACTCAGAAGCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR CCA 90 bp | GGTAGGAAGAAACACAGTTGTTGGTGTCTTATAGTGGGGTGGTGGTaGGGGGCGCTGAGGTGCACTGAGCTCCTGGGCAGTCACAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: GRKKHSCWCLIVGWW*GALRCTELLGSHKP Trigger: GGGCTTGTGACTGCCCAGGAGCTCAGTGCACCTCAGCGCCCCCCACCACCACCCCACTATAAGACACCAACAACTGTGTTTCTTCCTACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR CCA 90 bp | CCTTCAGGACAGATGCATAGCTTTGCCCACCACAGACCACCCACCTaGCAGTGGGCAGGCAGCAAGTTAGAGGACCAGAGGTGGGTAGGA | + |
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Preference number: 1 (lower is better) Translates to: PSGQMHSFAHHRPPT*QWAGSKLEDQRWVG Trigger: TCCTACCCACCTCTGGTCCTCTAACTTGCTGCCTGCCCACTGCCAGGTGGGTGGTCTGTGGTGGGCAAAGCTATGCATCTGTCCTGAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR TCA 90 bp | CTACATCCTCATCTGAAGGTGGAGAGAGATCCACTGGACCTGGTGTaGGCTTCTGAAACCTCAAAGCCCACCCCCAGTGACACACTTCCT | + |
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Preference number: 1 (lower is better) Translates to: LHPHLKVERDPLDLV*ASETSKPTPSDTLP Trigger: AGGAAGTGTGTCACTGGGGGTGGGCTTTGAGGTTTCAGAAGCTCACACCAGGTCCAGTGGATCTCTCTCCACCTTCAGATGAGGATGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR TCA 90 bp | CAACAGTTCCACTCCCTACATGCCACACTTCCTTCTATGTGCTTCTaGGTCCCTGCTTCTCCTCGCACTCCTTCAGGACAGATGCATAGC | + |
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Preference number: 1 (lower is better) Translates to: QQFHSLHATLPSMCF*VPASPRTPSGQMHS Trigger: GCTATGCATCTGTCCTGAAGGAGTGCGAGGAGAAGCAGGGACTCAGAAGCACATAGAAGGAAGTGTGGCATGTAGGGAGTGGAACTGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR CCA 90 bp | AAGCGGGTTTACAGTTTCAGAGGTTCATCATTCAGATTATCATCATaGTGGGAGGAAGCATGGCAGAGTGCGGGCATGGCGCTGGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: KRVYSFRGSSFRLSS*WEEAWQSAGMALEQ Trigger: CTGCTCCAGCGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATAATCTGAATGATGAACCTCTGAAACTGTAAACCCGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR GCA 90 bp | TTCATCATTCAGATTATCATCATGGTGGGAGGAAGCATGGCAGAGTaGGGGCATGGCGCTGGAGCAGTAGCTAAGAGTTCTACATCCTCA | + |
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Preference number: 1 (lower is better) Translates to: FIIQIIIMVGGSMAE*GHGAGAVAKSSTSS Trigger: TGAGGATGTAGAACTCTTAGCTACTGCTCCAGCGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATAATCTGAATGATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR GCA 90 bp | AGACCAATCAACCAACCAAACCATACAGAGCACACGCTTACTGATTaGGTGTCACCCACCAGTCACTCGGCAAACACCTTTACTAACACA | + |
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Preference number: 1 (lower is better) Translates to: RPINQPNHTEHTLTD*VSPTSHSANTFTNT Trigger: TGTGTTAGTAAAGGTGTTTGCCGAGTGACTGGTGGGTGACACGCAATCAGTAAGCGTGTGCTCTGTATGGTTTGGTTGGTTGATTGGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTCCTGGGCAGTCACAAGCCCCAGAGCCTCACTGTCCGAAGGACCAGCAGGTAGGCAGGTGGGTCCCTaGGTTCAAGGCCAGCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: SSWAVTSPRASLSEGPAGRQVGP*VQGQPE Trigger: CTCAGGCTGGCCTTGAACTCAGGGACCCACCTGCCT...ACCTGCTGGTCCTTCGGACAGTGAGGCTCTGGGGCTTGTGACTGCCCAGGAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR CAA 90 bp | GAGTCCCTGCTTCTCCTCGCACTCCTTCAGGACAGATGCATAGCTTaGCCCACCACAGACCACCCACCTGGCAGTGGGCAGGCAGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: ESLLLLALLQDRCIA*PTTDHPPGSGQAAS Trigger: ACTTGCTGCCTGCCCACTGCCAGGTGGGTGGTCTGTGGTGGGCAAAGCTATGCATCTGTCCTGAAGGAGTGCGAGGAGAAGCAGGGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR TCA 90 bp | GCACTCCTTCAGGACAGATGCATAGCTTTGCCCACCACAGACCACCCACCTGGCAGTTCAAGGCCAGCCTaGGTTCCAGGACCACCAGGG | + |
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Preference number: 2 (lower is better) Translates to: ALLQDRCIALPTTDHPPGSSRPA*VPGPPG Trigger: CCCTGGTGGTCCTGGAACTCAGGCTGGCCTTGAACT...GCCAGGTGGGTGGTCTGTGGTGGGCAAAGCTATGCATCTGTCCTGAAGGAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR TCA 90 bp | AGATTATCATCATGGTGGGAGGAAGCATGGCAGAGTGCGGGCATGGCGCTGGAGAGGCAGGTGGGTCCCTaGGTTCAAGGCCAGCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: RLSSWWEEAWQSAGMALERQVGP*VQGQPE Trigger: CTCAGGCTGGCCTTGAACTCAGGGACCCACCTGCCT...CTCCAGCGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATAATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCCTGGGCAGTCACAAGCCCCAGAGCCTCACTGTCCGAAGGACCAGCAGGTCCACACCAGGCGTGGTaGCACACACCTTTCATCTCA | + |
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Preference number: 2 (lower is better) Translates to: SSWAVTSPRASLSEGPAGPHQAW*HTPFIS Trigger: TGAGATGAAAGGTGTGTGCCACCACGCCTGGTGTGG...ACCTGCTGGTCCTTCGGACAGTGAGGCTCTGGGGCTTGTGACTGCCCAGGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR CCA 90 bp | CACTGGACCTGGTGTGAGCTTCTGAAACCTCAAAGCCCACCCCCAGTGACACACCACAGACCACCCACCTaGCAGTGGGCAGGCAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: HWTWCELLKPQSPPPVTHHRPPT*QWAGSK Trigger: CTTGCTGCCTGCCCACTGCCAGGTGGGTGGTCTGTG...GTGTGTCACTGGGGGTGGGCTTTGAGGTTTCAGAAGCTCACACCAGGTCCAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR CCA 90 bp | CACTGGACCTGGTGTGAGCTTCTGAAACCTCAAAGCCCACCCCCAGTGACACACGGTGCACTGAGCTCCTaGGCAGTCACAAGCCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: HWTWCELLKPQSPPPVTHGALSS*AVTSPR Trigger: TCTGGGGCTTGTGACTGCCCAGGAGCTCAGTGCACC...GTGTGTCACTGGGGGTGGGCTTTGAGGTTTCAGAAGCTCACACCAGGTCCAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGTGGGCAGGCAGCAAGTTAGAGGACCAGAGGTGGGTAGGAAGAAACACAGTAGTTCAAGGCCAGCCTaGGTTCCAGGACCACCAGGG | + |
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Preference number: 2 (lower is better) Translates to: AVGRQQVRGPEVGRKKHSSSRPA*VPGPPG Trigger: CCCTGGTGGTCCTGGAACTCAGGCTGGCCTTGAACT...ACTGTGTTTCTTCCTACCCACCTCTGGTCCTCTAACTTGCTGCCTGCCCACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGGTGACAGTCCCATCTCAAGCTCCCCTATCTGCAGTAAGAAGGCAGGAAGGAGGCAGAGGCAGGTaGGTCCCTGAGTTCAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: QQVTVPSQAPLSAVRRQEGGRGR*VPEFKA Trigger: GGCCTTGAACTCAGGGACCCACCTGCCTCTGCCTCC...TTCCTGCCTTCTTACTGCAGATAGGGGAGCTTGAGATGGGACTGTCACCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR CCA 90 bp | ACATGCCACACTTCCTTCTATGTGCTTCTGAGTCCCTGCTTCTCCTCGCACTCCGGAGGCAGAGGCAGGTaGGTCCCTGAGTTCAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: TCHTSFYVLLSPCFSSHSGGRGR*VPEFKA Trigger: GGCCTTGAACTCAGGGACCCACCTGCCTCTGCCTCC...GGAGTGCGAGGAGAAGCAGGGACTCAGAAGCACATAGAAGGAAGTGTGGCATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR TCA 90 bp | AGATTATCATCATGGTGGGAGGAAGCATGGCAGAGTGCGGGCATGGCGCTGGAGCCTTCTATGTGCTTCTaGGTCCCTGCTTCTCCTCGC | + |
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Preference number: 2 (lower is better) Translates to: RLSSWWEEAWQSAGMALEPSMCF*VPASPR Trigger: GCGAGGAGAAGCAGGGACTCAGAAGCACATAGAAGG...CTCCAGCGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATAATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTGGTGTGAGCTTCTGAAACCTCAAAGCCCACCCCCAGTGACACACTTCCTCCCTTCTATGTGCTTCTaGGTCCCTGCTTCTCCTCGC | + |
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Preference number: 2 (lower is better) Translates to: TWCELLKPQSPPPVTHFLPSMCF*VPASPR Trigger: GCGAGGAGAAGCAGGGACTCAGAAGCACATAGAAGG...GAGGAAGTGTGTCACTGGGGGTGGGCTTTGAGGTTTCAGAAGCTCACACCAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR TCA 90 bp | TATCATCATGGTGGGAGGAAGCATGGCAGAGTGCGGGCATGGCGCTGGAGCAGTTTCTACATCCTCATCTaGAGGTGGAGAGAGATCCAC | + |
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Preference number: 2 (lower is better) Translates to: YHHGGRKHGRVRAWRWSSFYILI*RWREIH Trigger: GTGGATCTCTCTCCACCTTCAGATGAGGATGTAGAA...ACTGCTCCAGCGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTGGGCAGGCAGCAAGTTAGAGGACCAGAGGTGGGTAGGAAGAAACACAGTTCCACACCAGGCGTGGTaGCACACACCTTTCATCTCA | + |
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Preference number: 2 (lower is better) Translates to: QWAGSKLEDQRWVGRNTVPHQAW*HTPFIS Trigger: TGAGATGAAAGGTGTGTGCCACCACGCCTGGTGTGG...AACTGTGTTTCTTCCTACCCACCTCTGGTCCTCTAACTTGCTGCCTGCCCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR CCA 90 bp | ACATGCCACACTTCCTTCTATGTGCTTCTGAGTCCCTGCTTCTCCTCGCACTCCCCACACCAGGCGTGGTaGCACACACCTTTCATCTCA | + |
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Preference number: 2 (lower is better) Translates to: TCHTSFYVLLSPCFSSHSPHQAW*HTPFIS Trigger: TGAGATGAAAGGTGTGTGCCACCACGCCTGGTGTGG...GGAGTGCGAGGAGAAGCAGGGACTCAGAAGCACATAGAAGGAAGTGTGGCATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTGGGCAGGCAGCAAGTTAGAGGACCAGAGGTGGGTAGGAAGAAACACAGTTCACACGCTTACTGATTaGGTGTCACCCACCAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: QWAGSKLEDQRWVGRNTVHTLTD*VSPTSH Trigger: GTGACTGGTGGGTGACACGCAATCAGTAAGCGTGTG...AACTGTGTTTCTTCCTACCCACCTCTGGTCCTCTAACTTGCTGCCTGCCCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR TCA 90 bp | GCTCCCCTATCTGCAGTAAGAAGGCAGGAAGACACTGCTAATATGTGTTCATTGAGTTCAAGGCCAGCCTaGGTTCCAGGACCACCAGGG | + |
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Preference number: 2 (lower is better) Translates to: APLSAVRRQEDTANMCSLSSRPA*VPGPPG Trigger: CCCTGGTGGTCCTGGAACTCAGGCTGGCCTTGAACT...CAATGAACACATATTAGCAGTGTCTTCCTGCCTTCTTACTGCAGATAGGGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCTTTCCAACAGTTCCACTCCCTACATGCCACACTTCCTTCTATGTGCTTCTGGTGCACTGAGCTCCTaGGCAGTCACAAGCCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: ILSNSSTPYMPHFLLCASGALSS*AVTSPR Trigger: TCTGGGGCTTGTGACTGCCCAGGAGCTCAGTGCACC...AGAAGCACATAGAAGGAAGTGTGGCATGTAGGGAGTGGAACTGTTGGAAAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR CCA 90 bp | AGATTATCATCATGGTGGGAGGAAGCATGGCAGAGTGCGGGCATGGCGCTGGAGTTAGAGGACCAGAGGTaGGTAGGAAGAAACACAGTT | + |
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Preference number: 2 (lower is better) Translates to: RLSSWWEEAWQSAGMALELEDQR*VGRNTV Trigger: AACTGTGTTTCTTCCTACCCACCTCTGGTCCTCTAA...CTCCAGCGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATAATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR GCA 90 bp | GCTCCCCTATCTGCAGTAAGAAGGCAGGAAGACACTGCTAATATGTGTTCATTGCACACGCTTACTGATTaGGTGTCACCCACCAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: APLSAVRRQEDTANMCSLHTLTD*VSPTSH Trigger: GTGACTGGTGGGTGACACGCAATCAGTAAGCGTGTG...CAATGAACACATATTAGCAGTGTCTTCCTGCCTTCTTACTGCAGATAGGGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTTTCAGAGGTTCATCATTCAGATTATCATCATGGTGGGAGGAAGCATGGCACACACGCTTACTGATTaGGTGTCACCCACCAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: QFQRFIIQIIIMVGGSMAHTLTD*VSPTSH Trigger: GTGACTGGTGGGTGACACGCAATCAGTAAGCGTGTG...TGCCATGCTTCCTCCCACCATGATGATAATCTGAATGATGAACCTCTGAAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCAAGGTGGTGACTCTGAAGTCACTCTGACCACTAAACACTTGGGTTCCTGTTCAAGGTCTGTTAGGTaGAGGGCAAAGTCGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: FQGGDSEVTLTTKHLGSCSRSVR*RAKSKP Trigger: TGGCTTCGACTTTGCCCTGCACCTAACAGACCTTGA...ACAGGAACCCAAGTGTTTAGTGGTCAGAGTGACTTCAGAGTCACCACCTTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220495.2 |
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| 3UTR TCA 72 bp | GGTCTGTTAGGTGCAGGGCAAAGTCGAAGCCACCACTaGGGATGCGCCGGCCACAGGGAGACCACCGTGCAG | + |
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Preference number: 3 (lower is better) Translates to: GLLGAGQSRSHH*GCAGHRETTVQ Trigger: CTGCACGGTGGTCTCCCTGTGGCCGGCGCATCCTCAGTGGTGGCTTCGACTTTGCCCTGCACCTAACAGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220495.2 |
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| 3UTR GCA 72 bp | GAGTCCCTGCTTCTCCTCGCACTCCTTCAGGACAGATaGATAGCTTTGCCCACCACAGACCACCCACCTGGC | + |
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Preference number: 3 (lower is better) Translates to: ESLLLLALLQDR*IALPTTDHPPG Trigger: GCCAGGTGGGTGGTCTGTGGTGGGCAAAGCTATGCATCTGTCCTGAAGGAGTGCGAGGAGAAGCAGGGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR CCA 72 bp | CAGATGCATAGCTTTGCCCACCACAGACCACCCACCTaGCAGTGGGCAGGCAGCAAGTTAGAGGACCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: QMHSFAHHRPPT*QWAGSKLEDQR Trigger: CCTCTGGTCCTCTAACTTGCTGCCTGCCCACTGCCAGGTGGGTGGTCTGTGGTGGGCAAAGCTATGCATCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR CAA 90 bp | ACCTGGTGTGAGCTTCTGAAACCTCAAAGCCCACCCCCAGTGACACACTTCCTCGACAGATGCATAGCTTaGCCCACCACAGACCACCCA | + |
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Preference number: 3 (lower is better) Translates to: TWCELLKPQSPPPVTHFLDRCIA*PTTDHP Trigger: TGGGTGGTCTGTGGTGGGCAAAGCTATGCATCTGTC...GAGGAAGTGTGTCACTGGGGGTGGGCTTTGAGGTTTCAGAAGCTCACACCAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR TCA 72 bp | CATCTGAAGGTGGAGAGAGATCCACTGGACCTGGTGTaGGCTTCTGAAACCTCAAAGCCCACCCCCAGTGAC | + |
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Preference number: 3 (lower is better) Translates to: HLKVERDPLDLV*ASETSKPTPSD Trigger: GTCACTGGGGGTGGGCTTTGAGGTTTCAGAAGCTCACACCAGGTCCAGTGGATCTCTCTCCACCTTCAGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR-3UTR CAA 90 bp | TATCATCATGGTGGGAGGAAGCATGGCAGAGTGCGGGCATGGCGCTGGAGCAGTGAAGAAACACAGTTGTaGGTGTCTTATAGTGGGGTG | + |
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Preference number: 3 (lower is better) Translates to: YHHGGRKHGRVRAWRWSSEETQL*VSYSGV Trigger: CACCCCACTATAAGACACCAACAACTGTGTTTCTTC...ACTGCTCCAGCGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR GCA 72 bp | CTAAACACTTGGGTTCCTGTTTCAAGGTCTGTTAGGTaGAGGGCAAAGTCGAAGCCACCACTGAGGATGCGC | + |
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Preference number: 3 (lower is better) Translates to: LNTWVPVSRSVR*RAKSKPPLRMR Trigger: GCGCATCCTCAGTGGTGGCTTCGACTTTGCCCTGCACCTAACAGACCTTGAAACAGGAACCCAAGTGTTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220495.2 |
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| 3UTR GCA 72 bp | TCCTCGTCATCCTTTCCAACAGTTCCACTCCCTACATaGCACACTTCCTTCTATGTGCTTCTGAGTCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: SSSSFPTVPLPT*HTSFYVLLSPC Trigger: GCAGGGACTCAGAAGCACATAGAAGGAAGTGTGGCATGTAGGGAGTGGAACTGTTGGAAAGGATGACGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR GCA 72 bp | AACCAACCAAACCATACAGAGCACACGCTTACTGATTaGGTGTCACCCACCAGTCACTCGGCAAACACCTTT | + |
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Preference number: 3 (lower is better) Translates to: NQPNHTEHTLTD*VSPTSHSANTF Trigger: AAAGGTGTTTGCCGAGTGACTGGTGGGTGACACGCAATCAGTAAGCGTGTGCTCTGTATGGTTTGGTTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| 3UTR CCA 72 bp | TACAGTTTCAGAGGTTCATCATTCAGATTATCATCATaGTGGGAGGAAGCATGGCAGAGTGCGGGCATGGCG | + |
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Preference number: 3 (lower is better) Translates to: YSFRGSSFRLSS*WEEAWQSAGMA Trigger: CGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATAATCTGAATGATGAACCTCTGAAACTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS-3UTR TCA 90 bp | TCACTGAAGCCCAGCAGCTCTCGGGAGCAGCCTAACCTCCGGCCGCCTACCCAGAGTCGAAGCCACCACTaGGGATGCGCCGGCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: SLKPSSSREQPNLRPPTQSRSHH*GCAGHR Trigger: CCTGTGGCCGGCGCATCCTCAGTGGTGGCTTCGACT...CTGGGTAGGCGGCCGGAGGTTAGGCTGCTCCCGAGAGCTGCTGGGCTTCAGTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR TCA 90 bp | GCTCCTGGGCAGTCACAAGCCCCAGAGCCTCACTGTCCGAAGGACCAGCAGGTGACCACTGAATGCTGTTaGCCGGGCCCCTGTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: APGQSQAPEPHCPKDQQVTTECC*PGPCGL Trigger: GAGGCCACAGGGGCCCGGTCAACAGCATTCAGTGGT...CACCTGCTGGTCCTTCGGACAGTGAGGCTCTGGGGCTTGTGACTGCCCAGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCTGGGCAGTCACAAGCCCCAGAGCCTCACTGTCCGAAGGACCAGCAGGTGTGTGCCCTTGTAGTGTaGACGCTCGGCTGGCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: APGQSQAPEPHCPKDQQVCALVV*TLGWPC Trigger: GCACGGCCAGCCGAGCGTGCACACTACAAGGGCACA...CACCTGCTGGTCCTTCGGACAGTGAGGCTCTGGGGCTTGTGACTGCCCAGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGCAGGGCAAAGTCGAAGCCACCACTGAGGATGCGCCGGCCACAGGGAGACCAGCGTCCCCACTTCTaGCAGGGTCAGCCTCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RCRAKSKPPLRMRRPQGDQRPHF*QGQPRS Trigger: AGACCGAGGCTGACCCTGCCAGAAGTGGGGACGCTG...GTCTCCCTGTGGCCGGCGCATCCTCAGTGGTGGCTTCGACTTTGCCCTGCACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220495.2 |
||
| CDS-3UTR CCA 90 bp | GCTCCTGGGCAGTCACAAGCCCCAGAGCCTCACTGTCCGAAGGACCAGCAGGTGGGCCACTGTAGCCTCTaGCTGGGACAAGACCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: APGQSQAPEPHCPKDQQVGHCSL*LGQDPG Trigger: CCCTGGGTCTTGTCCCAGCCAGAGGCTACAGTGGCC...CACCTGCTGGTCCTTCGGACAGTGAGGCTCTGGGGCTTGTGACTGCCCAGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR TCA 90 bp | TATCATCATGGTGGGAGGAAGCATGGCAGAGTGCGGGCATGGCGCTGGAGCAGTAGTCGAAGCCACCACTaGGGATGCGCCGGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: YHHGGRKHGRVRAWRWSSSRSHH*GCAGHR Trigger: CCTGTGGCCGGCGCATCCTCAGTGGTGGCTTCGACT...ACTGCTCCAGCGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR CCA 90 bp | TCACTGAAGCCCAGCAGCTCTCGGGAGCAGCCTAACCTCCGGCCGCCTACCCAGCCAGGGTCTGCTGGATaGTGGCCTTGTAGCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLKPSSSREQPNLRPPTQPGSAG*WPCSLS Trigger: TGAAAGGCTACAAGGCCACCATCCAGCAGACCCTGG...CTGGGTAGGCGGCCGGAGGTTAGGCTGCTCCCGAGAGCTGCTGGGCTTCAGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR GCA 90 bp | CGCCGAGACGGCTTCTCACCCCCATGCTATAGCCGAGTCACTGAAGCCCAGCAGACAGGGAGACCACCGTaGAGCCCTTACTGCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: RRDGFSPPCYSRVTEAQQTGRPP*SPYCLT Trigger: AGTGAGGCAGTAAGGGCTGCACGGTGGTCTCCCTGT...CTGCTGGGCTTCAGTGACTCGGCTATAGCATGGGGGTGAGAAGCCGTCTCGGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR CCA 90 bp | GCTCCTGGGCAGTCACAAGCCCCAGAGCCTCACTGTCCGAAGGACCAGCAGGTGAACTCGGAGCCCTCCTaGAGGAAGAGAATGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: APGQSQAPEPHCPKDQQVNSEPS*RKRMSR Trigger: CCTGGACATTCTCTTCCTCCAGGAGGGCTCCGAGTT...CACCTGCTGGTCCTTCGGACAGTGAGGCTCTGGGGCTTGTGACTGCCCAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCCTGGGCAGTCACAAGCCCCAGAGCCTCACTGTCCGAAGGACCAGCAGGTCAGCAGGTCACCACATaGGGAACACTCACAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSWAVTSPRASLSEGPAGQQVTT*GTLTAH Trigger: GTGGGCTGTGAGTGTTCCCCATGTGGTGACCTGCTG...ACCTGCTGGTCCTTCGGACAGTGAGGCTCTGGGGCTTGTGACTGCCCAGGAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR CCA 90 bp | TATCATCATGGTGGGAGGAAGCATGGCAGAGTGCGGGCATGGCGCTGGAGCAGTGCACAGGATGGTAGGTaGTGCCAAGGCAGGCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: YHHGGRKHGRVRAWRWSSAQDGR*CQGRPA Trigger: CGCAGGCCTGCCTTGGCACCACCTACCATCCTGTGC...ACTGCTCCAGCGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR GCA 90 bp | TCACTGAAGCCCAGCAGCTCTCGGGAGCAGCCTAACCTCCGGCCGCCTACCCAGGTTGCCATTGGTTTGTaGAAGGAACACAGGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLKPSSSREQPNLRPPTQVAIGL*KEHRLP Trigger: AGGGAGCCTGTGTTCCTTGCACAAACCAATGGCAAC...CTGGGTAGGCGGCCGGAGGTTAGGCTGCTCCCGAGAGCTGCTGGGCTTCAGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR GCA 90 bp | CACTGGACCTGGTGTGAGCTTCTGAAACCTCAAAGCCCACCCCCAGTGACACACTGTGCCCTTGTAGTGTaGACGCTCGGCTGGCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HWTWCELLKPQSPPPVTHCALVV*TLGWPC Trigger: GCACGGCCAGCCGAGCGTGCACACTACAAGGGCACA...GTGTGTCACTGGGGGTGGGCTTTGAGGTTTCAGAAGCTCACACCAGGTCCAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR CCA 90 bp | CACTGGACCTGGTGTGAGCTTCTGAAACCTCAAAGCCCACCCCCAGTGACACACCAGCGTCCCCACTTCTaGCAGGGTCAGCCTCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HWTWCELLKPQSPPPVTHQRPHF*QGQPRS Trigger: AGACCGAGGCTGACCCTGCCAGAAGTGGGGACGCTG...GTGTGTCACTGGGGGTGGGCTTTGAGGTTTCAGAAGCTCACACCAGGTCCAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR CCA 90 bp | AGCTCCTGGGCAGTCACAAGCCCCAGAGCCTCACTGTCCGAAGGACCAGCAGGTCCAGGGTCTGCTGGATaGTGGCCTTGTAGCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSWAVTSPRASLSEGPAGPGSAG*WPCSLS Trigger: TGAAAGGCTACAAGGCCACCATCCAGCAGACCCTGG...ACCTGCTGGTCCTTCGGACAGTGAGGCTCTGGGGCTTGTGACTGCCCAGGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCCTGGGCAGTCACAAGCCCCAGAGCCTCACTGTCCGAAGGACCAGCAGGTTCTGGTTGGAGATCTTaGCAGCGGTCCGGAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSWAVTSPRASLSEGPAGSGWRS*QRSGNP Trigger: GGGATTTCCGGACCGCTGCCAAGATCTCCAACCAGA...ACCTGCTGGTCCTTCGGACAGTGAGGCTCTGGGGCTTGTGACTGCCCAGGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR CCA 90 bp | CGCCGAGACGGCTTCTCACCCCCATGCTATAGCCGAGTCACTGAAGCCCAGCAGTCTGGTTGGAGATCTTaGCAGCGGTCCGGAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: RRDGFSPPCYSRVTEAQQSGWRS*QRSGNP Trigger: GGGATTTCCGGACCGCTGCCAAGATCTCCAACCAGA...CTGCTGGGCTTCAGTGACTCGGCTATAGCATGGGGGTGAGAAGCCGTCTCGGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR CCA 90 bp | GCACTCCTTCAGGACAGATGCATAGCTTTGCCCACCACAGACCACCCACCTGGCGAACACAGGCTCCCTTaGATGCAAGGCGAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALLQDRCIALPTTDHPPGEHRLP*MQGEAG Trigger: CCCAGCCTCGCCTTGCATCCAAGGGAGCCTGTGTTC...GCCAGGTGGGTGGTCTGTGGTGGGCAAAGCTATGCATCTGTCCTGAAGGAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR TCA 90 bp | TCACTGAAGCCCAGCAGCTCTCGGGAGCAGCCTAACCTCCGGCCGCCTACCCAGTCAAATATGGCTGGATaGACTCAGACACTGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLKPSSSREQPNLRPPTQSNMAG*TQTLWE Trigger: CTCCCACAGTGTCTGAGTTCATCCAGCCATATTTGA...CTGGGTAGGCGGCCGGAGGTTAGGCTGCTCCCGAGAGCTGCTGGGCTTCAGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR GCA 90 bp | CGCCGAGACGGCTTCTCACCCCCATGCTATAGCCGAGTCACTGAAGCCCAGCAGAGCCTTTCACCACCTTaGCAGTCCTCATGTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RRDGFSPPCYSRVTEAQQSLSPP*QSSCPK Trigger: CTTGGGACATGAGGACTGGCAAGGTGGTGAAAGGCT...CTGCTGGGCTTCAGTGACTCGGCTATAGCATGGGGGTGAGAAGCCGTCTCGGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR GCA 90 bp | GCAGTGGGCAGGCAGCAAGTTAGAGGACCAGAGGTGGGTAGGAAGAAACACAGTTGTGCCCTTGTAGTGTaGACGCTCGGCTGGCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AVGRQQVRGPEVGRKKHSCALVV*TLGWPC Trigger: GCACGGCCAGCCGAGCGTGCACACTACAAGGGCACA...ACTGTGTTTCTTCCTACCCACCTCTGGTCCTCTAACTTGCTGCCTGCCCACTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS-3UTR GCA 90 bp | AGATTATCATCATGGTGGGAGGAAGCATGGCAGAGTGCGGGCATGGCGCTGGAGGTGCCAAGGCAGGCCTaGGTGTGCCCTTGTAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLSSWWEEAWQSAGMALEVPRQA*VCPCSV Trigger: CACACTACAAGGGCACACGCAGGCCTGCCTTGGCAC...CTCCAGCGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATAATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS-3UTR CCA 90 bp | ACCTGGTGTGAGCTTCTGAAACCTCAAAGCCCACCCCCAGTGACACACTTCCTCGCACAGGATGGTAGGTaGTGCCAAGGCAGGCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TWCELLKPQSPPPVTHFLAQDGR*CQGRPA Trigger: CGCAGGCCTGCCTTGGCACCACCTACCATCCTGTGC...GAGGAAGTGTGTCACTGGGGGTGGGCTTTGAGGTTTCAGAAGCTCACACCAGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS-3UTR TCA 90 bp | CACTGGACCTGGTGTGAGCTTCTGAAACCTCAAAGCCCACCCCCAGTGACACACAAGACTGGACACCACTaGATGCTGTTGACCGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HWTWCELLKPQSPPPVTHKTGHH*MLLTGP Trigger: GGGCCCGGTCAACAGCATTCAGTGGTGTCCAGTCTT...GTGTGTCACTGGGGGTGGGCTTTGAGGTTTCAGAAGCTCACACCAGGTCCAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR GCA 90 bp | GCAGTGGGCAGGCAGCAAGTTAGAGGACCAGAGGTGGGTAGGAAGAAACACAGTACAGGCTCCCTTGGATaGAAGGCGAGGCTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: AVGRQQVRGPEVGRKKHSTGSLG*KARLGQ Trigger: CTGTCCCAGCCTCGCCTTGCATCCAAGGGAGCCTGT...ACTGTGTTTCTTCCTACCCACCTCTGGTCCTCTAACTTGCTGCCTGCCCACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS-3UTR GCA 90 bp | ACCTGGTGTGAGCTTCTGAAACCTCAAAGCCCACCCCCAGTGACACACTTCCTCGTGCCAAGGCAGGCCTaGGTGTGCCCTTGTAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TWCELLKPQSPPPVTHFLVPRQA*VCPCSV Trigger: CACACTACAAGGGCACACGCAGGCCTGCCTTGGCAC...GAGGAAGTGTGTCACTGGGGGTGGGCTTTGAGGTTTCAGAAGCTCACACCAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS-3UTR CCA 90 bp | CAGTGGGCAGGCAGCAAGTTAGAGGACCAGAGGTGGGTAGGAAGAAACACAGTTGGCCACTGTAGCCTCTaGCTGGGACAAGACCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QWAGSKLEDQRWVGRNTVGHCSL*LGQDPG Trigger: CCCTGGGTCTTGTCCCAGCCAGAGGCTACAGTGGCC...AACTGTGTTTCTTCCTACCCACCTCTGGTCCTCTAACTTGCTGCCTGCCCACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR CCA 90 bp | AGCTCCTGGGCAGTCACAAGCCCCAGAGCCTCACTGTCCGAAGGACCAGCAGGTCACTGGGAGGGAAAGTaGTATCAGGTTCCTTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSWAVTSPRASLSEGPAGHWEGK*YQVPLR Trigger: CCTCAAAGGAACCTGATACCACTTTCCCTCCCAGTG...ACCTGCTGGTCCTTCGGACAGTGAGGCTCTGGGGCTTGTGACTGCCCAGGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGGCAGGCAGCAAGTTAGAGGACCAGAGGTGGGTAGGAAGAAACACAGTTTGACCGGGCCCCTGTaGCCTCGAAGGTGGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AVGRQQVRGPEVGRKKHSLTGPL*PRRWKS Trigger: GCTTTTCCACCTTCGAGGCCACAGGGGCCCGGTCAA...ACTGTGTTTCTTCCTACCCACCTCTGGTCCTCTAACTTGCTGCCTGCCCACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR CCA 90 bp | TCACTGAAGCCCAGCAGCTCTCGGGAGCAGCCTAACCTCCGGCCGCCTACCCAGGCTCTTGCAAAAGACTaGACACCACTGAATGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLKPSSSREQPNLRPPTQALAKD*TPLNAV Trigger: AACAGCATTCAGTGGTGTCCAGTCTTTTGCAAGAGC...CTGGGTAGGCGGCCGGAGGTTAGGCTGCTCCCGAGAGCTGCTGGGCTTCAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR CCA 90 bp | GCACTCCTTCAGGACAGATGCATAGCTTTGCCCACCACAGACCACCCACCTGGCGGGTCTGCTGGATGGTaGCCTTGTAGCCTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ALLQDRCIALPTTDHPPGGSAGW*PCSLSP Trigger: TGGTGAAAGGCTACAAGGCCACCATCCAGCAGACCC...GCCAGGTGGGTGGTCTGTGGTGGGCAAAGCTATGCATCTGTCCTGAAGGAGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS-3UTR CCA 90 bp | GCACTCCTTCAGGACAGATGCATAGCTTTGCCCACCACAGACCACCCACCTGGCAACTCGGAGCCCTCCTaGAGGAAGAGAATGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALLQDRCIALPTTDHPPGNSEPS*RKRMSR Trigger: CCTGGACATTCTCTTCCTCCAGGAGGGCTCCGAGTT...GCCAGGTGGGTGGTCTGTGGTGGGCAAAGCTATGCATCTGTCCTGAAGGAGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR CCA 90 bp | TATCATCATGGTGGGAGGAAGCATGGCAGAGTGCGGGCATGGCGCTGGAGCAGTTCTGGTTGGAGATCTTaGCAGCGGTCCGGAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: YHHGGRKHGRVRAWRWSSSGWRS*QRSGNP Trigger: GGGATTTCCGGACCGCTGCCAAGATCTCCAACCAGA...ACTGCTCCAGCGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS-3UTR CCA 90 bp | CAGCAGGTGACAGTCCCATCTCAAGCTCCCCTATCTGCAGTAAGAAGGCAGGAAGCACAGGATGGTAGGTaGTGCCAAGGCAGGCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: QQVTVPSQAPLSAVRRQEAQDGR*CQGRPA Trigger: CGCAGGCCTGCCTTGGCACCACCTACCATCCTGTGC...TTCCTGCCTTCTTACTGCAGATAGGGGAGCTTGAGATGGGACTGTCACCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS-3UTR GCA 90 bp | CACTGGACCTGGTGTGAGCTTCTGAAACCTCAAAGCCCACCCCCAGTGACACACGTCACTTATCTGACCTaGAGCGTCCCCACTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HWTWCELLKPQSPPPVTHVTYLT*SVPTSG Trigger: GCCAGAAGTGGGGACGCTGCAGGTCAGATAAGTGAC...GTGTGTCACTGGGGGTGGGCTTTGAGGTTTCAGAAGCTCACACCAGGTCCAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR GCA 90 bp | CGCCGAGACGGCTTCTCACCCCCATGCTATAGCCGAGTCACTGAAGCCCAGCAGGAAGCATGTGGCTCTTaGAAAAGACTGGACACCACT | + |
|
Preference number: 4 (lower is better) Translates to: RRDGFSPPCYSRVTEAQQEACGS*KRLDTT Trigger: AGTGGTGTCCAGTCTTTTGCAAGAGCCACATGCTTC...CTGCTGGGCTTCAGTGACTCGGCTATAGCATGGGGGTGAGAAGCCGTCTCGGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAGGTGACAGTCCCATCTCAAGCTCCCCTATCTGCAGTAAGAAGGCAGGAAACAGGCTCCCTTGGATaGAAGGCGAGGCTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: QQVTVPSQAPLSAVRRQETGSLG*KARLGQ Trigger: CTGTCCCAGCCTCGCCTTGCATCCAAGGGAGCCTGT...TTCCTGCCTTCTTACTGCAGATAGGGGAGCTTGAGATGGGACTGTCACCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR GCA 90 bp | AGCTCCTGGGCAGTCACAAGCCCCAGAGCCTCACTGTCCGAAGGACCAGCAGGTAGAGAGCCAGGTAGTTaGCATTGGTTTGTGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSWAVTSPRASLSEGPAGREPGS*HWFVQG Trigger: TCCTTGCACAAACCAATGGCAACTACCTGGCTCTCT...ACCTGCTGGTCCTTCGGACAGTGAGGCTCTGGGGCTTGTGACTGCCCAGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGGGCAGGCAGCAAGTTAGAGGACCAGAGGTGGGTAGGAAGAAACACAGTTGTGCCAAGGCAGGCCTaGGTGTGCCCTTGTAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QWAGSKLEDQRWVGRNTVVPRQA*VCPCSV Trigger: CACACTACAAGGGCACACGCAGGCCTGCCTTGGCAC...AACTGTGTTTCTTCCTACCCACCTCTGGTCCTCTAACTTGCTGCCTGCCCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR CCA 90 bp | TTCTATGTGCTTCTGAGTCCCTGCTTCTCCTCGCACTCCTTCAGGACAGATGCACAGCGTCCCCACTTCTaGCAGGGTCAGCCTCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FYVLLSPCFSSHSFRTDAQRPHF*QGQPRS Trigger: AGACCGAGGCTGACCCTGCCAGAAGTGGGGACGCTG...TGCATCTGTCCTGAAGGAGTGCGAGGAGAAGCAGGGACTCAGAAGCACATAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR CCA 90 bp | CGCCGAGACGGCTTCTCACCCCCATGCTATAGCCGAGTCACTGAAGCCCAGCAGCAGACGTTGCATCCCTaGGTCTTCATTAGGAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RRDGFSPPCYSRVTEAQQQTLHP*VFIRRV Trigger: AACTCTCCTAATGAAGACCCAGGGATGCAACGTCTG...CTGCTGGGCTTCAGTGACTCGGCTATAGCATGGGGGTGAGAAGCCGTCTCGGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAGGTGACAGTCCCATCTCAAGCTCCCCTATCTGCAGTAAGAAGGCAGGAATTGACCGGGCCCCTGTaGCCTCGAAGGTGGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QQVTVPSQAPLSAVRRQELTGPL*PRRWKS Trigger: GCTTTTCCACCTTCGAGGCCACAGGGGCCCGGTCAA...TTCCTGCCTTCTTACTGCAGATAGGGGAGCTTGAGATGGGACTGTCACCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGGCAGGCAGCAAGTTAGAGGACCAGAGGTGGGTAGGAAGAAACACAGTCAGCAGGTCACCACATaGGGAACACTCACAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AVGRQQVRGPEVGRKKHSQQVTT*GTLTAH Trigger: GTGGGCTGTGAGTGTTCCCCATGTGGTGACCTGCTG...ACTGTGTTTCTTCCTACCCACCTCTGGTCCTCTAACTTGCTGCCTGCCCACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR TCA 90 bp | CGCCGAGACGGCTTCTCACCCCCATGCTATAGCCGAGTCACTGAAGCCCAGCAGGTAGTCTCTCTGTACTaGCTGTTCAAATATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRDGFSPPCYSRVTEAQQVVSLY*LFKYGW Trigger: CCAGCCATATTTGAACAGTCAGTACAGAGAGACTAC...CTGCTGGGCTTCAGTGACTCGGCTATAGCATGGGGGTGAGAAGCCGTCTCGGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR TCA 90 bp | CAGTGGGCAGGCAGCAAGTTAGAGGACCAGAGGTGGGTAGGAAGAAACACAGTTAAGACTGGACACCACTaGATGCTGTTGACCGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QWAGSKLEDQRWVGRNTVKTGHH*MLLTGP Trigger: GGGCCCGGTCAACAGCATTCAGTGGTGTCCAGTCTT...AACTGTGTTTCTTCCTACCCACCTCTGGTCCTCTAACTTGCTGCCTGCCCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTGGGCAGGCAGCAAGTTAGAGGACCAGAGGTGGGTAGGAAGAAACACAGTGATGCAAGGCGAGGCTaGGACAGGTGTACCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVGRQQVRGPEVGRKKHSDARRG*DRCTSH Trigger: ATGAGAGGTACACCTGTCCCAGCCTCGCCTTGCATC...ACTGTGTTTCTTCCTACCCACCTCTGGTCCTCTAACTTGCTGCCTGCCCACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGGGCAGGCAGCAAGTTAGAGGACCAGAGGTGGGTAGGAAGAAACACAGTTCAGCAGGTCACCACATaGGGAACACTCACAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QWAGSKLEDQRWVGRNTVQQVTT*GTLTAH Trigger: GTGGGCTGTGAGTGTTCCCCATGTGGTGACCTGCTG...AACTGTGTTTCTTCCTACCCACCTCTGGTCCTCTAACTTGCTGCCTGCCCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS-3UTR GCA 90 bp | TTCTATGTGCTTCTGAGTCCCTGCTTCTCCTCGCACTCCTTCAGGACAGATGCAGGGGCTCTCCATCTTTaGCCCCACCTGCTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FYVLLSPCFSSHSFRTDAGALHL*PHLLLD Trigger: ATCCAGAAGCAGGTGGGGGCAAAGATGGAGAGCCCC...TGCATCTGTCCTGAAGGAGTGCGAGGAGAAGCAGGGACTCAGAAGCACATAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR GCA 90 bp | AGATTATCATCATGGTGGGAGGAAGCATGGCAGAGTGCGGGCATGGCGCTGGAGTCAAGGTCTGTTAGGTaGAGGGCAAAGTCGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLSSWWEEAWQSAGMALESRSVR*RAKSKP Trigger: TGGCTTCGACTTTGCCCTGCACCTAACAGACCTTGA...CTCCAGCGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATAATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR GCA 90 bp | CACTGGACCTGGTGTGAGCTTCTGAAACCTCAAAGCCCACCCCCAGTGACACACGTTGCCATTGGTTTGTaGAAGGAACACAGGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HWTWCELLKPQSPPPVTHVAIGL*KEHRLP Trigger: AGGGAGCCTGTGTTCCTTGCACAAACCAATGGCAAC...GTGTGTCACTGGGGGTGGGCTTTGAGGTTTCAGAAGCTCACACCAGGTCCAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCCTGGGCAGTCACAAGCCCCAGAGCCTCACTGTCCGAAGGACCAGCAGGTCTGTTCAAATATGGCTaGATGAACTCAGACACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSWAVTSPRASLSEGPAGLFKYG*MNSDTV Trigger: CACAGTGTCTGAGTTCATCCAGCCATATTTGAACAG...ACCTGCTGGTCCTTCGGACAGTGAGGCTCTGGGGCTTGTGACTGCCCAGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAGGTGACAGTCCCATCTCAAGCTCCCCTATCTGCAGTAAGAAGGCAGGAAAACTCGGAGCCCTCCTaGAGGAAGAGAATGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QQVTVPSQAPLSAVRRQENSEPS*RKRMSR Trigger: CCTGGACATTCTCTTCCTCCAGGAGGGCTCCGAGTT...TTCCTGCCTTCTTACTGCAGATAGGGGAGCTTGAGATGGGACTGTCACCTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR CCA 90 bp | AGATTATCATCATGGTGGGAGGAAGCATGGCAGAGTGCGGGCATGGCGCTGGAGCTCTCATGGAAGATCTaGTTGGAGATCTTGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RLSSWWEEAWQSAGMALELSWKI*LEILAA Trigger: CGCTGCCAAGATCTCCAACCAGATCTTCCATGAGAG...CTCCAGCGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATAATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR CCA 90 bp | TATCATCATGGTGGGAGGAAGCATGGCAGAGTGCGGGCATGGCGCTGGAGCAGTCAGGTGTACCTCTCATaGAAGATCTGGTTGGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: YHHGGRKHGRVRAWRWSSQVYLS*KIWLEI Trigger: GATCTCCAACCAGATCTTCCATGAGAGGTACACCTG...ACTGCTCCAGCGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR TCA 90 bp | CACTGGACCTGGTGTGAGCTTCTGAAACCTCAAAGCCCACCCCCAGTGACACACTCAAATATGGCTGGATaGACTCAGACACTGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HWTWCELLKPQSPPPVTHSNMAG*TQTLWE Trigger: CTCCCACAGTGTCTGAGTTCATCCAGCCATATTTGA...GTGTGTCACTGGGGGTGGGCTTTGAGGTTTCAGAAGCTCACACCAGGTCCAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR GCA 90 bp | TTCTATGTGCTTCTGAGTCCCTGCTTCTCCTCGCACTCCTTCAGGACAGATGCAGTCACTTATCTGACCTaGAGCGTCCCCACTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FYVLLSPCFSSHSFRTDAVTYLT*SVPTSG Trigger: GCCAGAAGTGGGGACGCTGCAGGTCAGATAAGTGAC...TGCATCTGTCCTGAAGGAGTGCGAGGAGAAGCAGGGACTCAGAAGCACATAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR GCA 90 bp | AGATTATCATCATGGTGGGAGGAAGCATGGCAGAGTGCGGGCATGGCGCTGGAGAGAGAGCCAGGTAGTTaGCATTGGTTTGTGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLSSWWEEAWQSAGMALEREPGS*HWFVQG Trigger: TCCTTGCACAAACCAATGGCAACTACCTGGCTCTCT...CTCCAGCGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATAATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR CCA 90 bp | CAGCAGGTGACAGTCCCATCTCAAGCTCCCCTATCTGCAGTAAGAAGGCAGGAACTGTGGCCTCGAAGGTaGAAAAGCACTTTCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QQVTVPSQAPLSAVRRQELWPRR*KSTFLG Trigger: CCCCAAGAAAGTGCTTTTCCACCTTCGAGGCCACAG...TTCCTGCCTTCTTACTGCAGATAGGGGAGCTTGAGATGGGACTGTCACCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR CCA 90 bp | AGCTCCTGGGCAGTCACAAGCCCCAGAGCCTCACTGTCCGAAGGACCAGCAGGTGACGTTGTGGTCTTTTaGATGAAATTTCAAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSWAVTSPRASLSEGPAGDVVVF*MKFQGG Trigger: ACCACCTTGAAATTTCATCCAAAAGACCACAACGTC...ACCTGCTGGTCCTTCGGACAGTGAGGCTCTGGGGCTTGTGACTGCCCAGGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR CCA 90 bp | TTCTATGTGCTTCTGAGTCCCTGCTTCTCCTCGCACTCCTTCAGGACAGATGCAGGGTCTGCTGGATGGTaGCCTTGTAGCCTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: FYVLLSPCFSSHSFRTDAGSAGW*PCSLSP Trigger: TGGTGAAAGGCTACAAGGCCACCATCCAGCAGACCC...TGCATCTGTCCTGAAGGAGTGCGAGGAGAAGCAGGGACTCAGAAGCACATAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR GCA 90 bp | GCTCCCCTATCTGCAGTAAGAAGGCAGGAAGACACTGCTAATATGTGTTCATTGACAGGCTCCCTTGGATaGAAGGCGAGGCTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: APLSAVRRQEDTANMCSLTGSLG*KARLGQ Trigger: CTGTCCCAGCCTCGCCTTGCATCCAAGGGAGCCTGT...CAATGAACACATATTAGCAGTGTCTTCCTGCCTTCTTACTGCAGATAGGGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR GCA 90 bp | ACATGCCACACTTCCTTCTATGTGCTTCTGAGTCCCTGCTTCTCCTCGCACTCCGTTGCCATTGGTTTGTaGAAGGAACACAGGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TCHTSFYVLLSPCFSSHSVAIGL*KEHRLP Trigger: AGGGAGCCTGTGTTCCTTGCACAAACCAATGGCAAC...GGAGTGCGAGGAGAAGCAGGGACTCAGAAGCACATAGAAGGAAGTGTGGCATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR GCA 90 bp | GCAGTGGGCAGGCAGCAAGTTAGAGGACCAGAGGTGGGTAGGAAGAAACACAGTAGAGAGCCAGGTAGTTaGCATTGGTTTGTGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AVGRQQVRGPEVGRKKHSREPGS*HWFVQG Trigger: TCCTTGCACAAACCAATGGCAACTACCTGGCTCTCT...ACTGTGTTTCTTCCTACCCACCTCTGGTCCTCTAACTTGCTGCCTGCCCACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS-3UTR CCA 90 bp | ACCTGGTGTGAGCTTCTGAAACCTCAAAGCCCACCCCCAGTGACACACTTCCTCCAGACGTTGCATCCCTaGGTCTTCATTAGGAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TWCELLKPQSPPPVTHFLQTLHP*VFIRRV Trigger: AACTCTCCTAATGAAGACCCAGGGATGCAACGTCTG...GAGGAAGTGTGTCACTGGGGGTGGGCTTTGAGGTTTCAGAAGCTCACACCAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR CCA 90 bp | ACATGCCACACTTCCTTCTATGTGCTTCTGAGTCCCTGCTTCTCCTCGCACTCCCACTGGGAGGGAAAGTaGTATCAGGTTCCTTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TCHTSFYVLLSPCFSSHSHWEGK*YQVPLR Trigger: CCTCAAAGGAACCTGATACCACTTTCCCTCCCAGTG...GGAGTGCGAGGAGAAGCAGGGACTCAGAAGCACATAGAAGGAAGTGTGGCATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR CCA 90 bp | GCTCCCCTATCTGCAGTAAGAAGGCAGGAAGACACTGCTAATATGTGTTCATTGGCCCCCACCTGCTTCTaGATTCAGCGCTTGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: APLSAVRRQEDTANMCSLAPTCF*IQRLQL Trigger: CAGCTGCAAGCGCTGAATCCAGAAGCAGGTGGGGGC...CAATGAACACATATTAGCAGTGTCTTCCTGCCTTCTTACTGCAGATAGGGGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR CCA 90 bp | TATCATCATGGTGGGAGGAAGCATGGCAGAGTGCGGGCATGGCGCTGGAGCAGTCTGACTGTTCAAATATaGCTGGATGAACTCAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: YHHGGRKHGRVRAWRWSSLTVQI*LDELRH Trigger: GTGTCTGAGTTCATCCAGCCATATTTGAACAGTCAG...ACTGCTCCAGCGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR CCA 90 bp | TTCTATGTGCTTCTGAGTCCCTGCTTCTCCTCGCACTCCTTCAGGACAGATGCACTGTGGCCTCGAAGGTaGAAAAGCACTTTCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FYVLLSPCFSSHSFRTDALWPRR*KSTFLG Trigger: CCCCAAGAAAGTGCTTTTCCACCTTCGAGGCCACAG...TGCATCTGTCCTGAAGGAGTGCGAGGAGAAGCAGGGACTCAGAAGCACATAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR CCA 90 bp | AGATTATCATCATGGTGGGAGGAAGCATGGCAGAGTGCGGGCATGGCGCTGGAGGCTCTTGCAAAAGACTaGACACCACTGAATGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLSSWWEEAWQSAGMALEALAKD*TPLNAV Trigger: AACAGCATTCAGTGGTGTCCAGTCTTTTGCAAGAGC...CTCCAGCGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATAATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR CCA 90 bp | GCTCCCCTATCTGCAGTAAGAAGGCAGGAAGACACTGCTAATATGTGTTCATTGGAACACAGGCTCCCTTaGATGCAAGGCGAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: APLSAVRRQEDTANMCSLEHRLP*MQGEAG Trigger: CCCAGCCTCGCCTTGCATCCAAGGGAGCCTGTGTTC...CAATGAACACATATTAGCAGTGTCTTCCTGCCTTCTTACTGCAGATAGGGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR CCA 90 bp | ACATGCCACACTTCCTTCTATGTGCTTCTGAGTCCCTGCTTCTCCTCGCACTCCCAGGTGTACCTCTCATaGAAGATCTGGTTGGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: TCHTSFYVLLSPCFSSHSQVYLS*KIWLEI Trigger: GATCTCCAACCAGATCTTCCATGAGAGGTACACCTG...GGAGTGCGAGGAGAAGCAGGGACTCAGAAGCACATAGAAGGAAGTGTGGCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR TCA 90 bp | ACATGCCACACTTCCTTCTATGTGCTTCTGAGTCCCTGCTTCTCCTCGCACTCCGTAGTCTCTCTGTACTaGCTGTTCAAATATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TCHTSFYVLLSPCFSSHSVVSLY*LFKYGW Trigger: CCAGCCATATTTGAACAGTCAGTACAGAGAGACTAC...GGAGTGCGAGGAGAAGCAGGGACTCAGAAGCACATAGAAGGAAGTGTGGCATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR GCA 90 bp | TATCATCATGGTGGGAGGAAGCATGGCAGAGTGCGGGCATGGCGCTGGAGCAGTCTGTGCTTTCAAATGTaGTTTGATCATGAGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: YHHGGRKHGRVRAWRWSSLCFQM*FDHEKV Trigger: AACCTTCTCATGATCAAAGCACATTTGAAAGCACAG...ACTGCTCCAGCGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR GCA 90 bp | ATTGCCAAAATCACATTAAGAAAAACCACACCAGGCGTGGTGGCACACACCTTTACAGGGAGACCACCGTaGAGCCCTTACTGCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: IAKITLRKTTPGVVAHTFTGRPP*SPYCLT Trigger: AGTGAGGCAGTAAGGGCTGCACGGTGGTCTCCCTGT...AAAGGTGTGTGCCACCACGCCTGGTGTGGTTTTTCTTAATGTGATTTTGGCAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGGTGTGAGCTTCTGAAACCTCAAAGCCCACCCCCAGTGACACACTTCCTCCTGTTCAAATATGGCTaGATGAACTCAGACACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TWCELLKPQSPPPVTHFLLFKYG*MNSDTV Trigger: CACAGTGTCTGAGTTCATCCAGCCATATTTGAACAG...GAGGAAGTGTGTCACTGGGGGTGGGCTTTGAGGTTTCAGAAGCTCACACCAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR CCA 90 bp | TTCTATGTGCTTCTGAGTCCCTGCTTCTCCTCGCACTCCTTCAGGACAGATGCACCAGGTAGTTGCCATTaGTTTGTGCAAGGAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: FYVLLSPCFSSHSFRTDAPGSCH*FVQGTQ Trigger: CTGTGTTCCTTGCACAAACCAATGGCAACTACCTGG...TGCATCTGTCCTGAAGGAGTGCGAGGAGAAGCAGGGACTCAGAAGCACATAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR GCA 90 bp | CACTGGACCTGGTGTGAGCTTCTGAAACCTCAAAGCCCACCCCCAGTGACACACCTGTGCTTTCAAATGTaGTTTGATCATGAGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HWTWCELLKPQSPPPVTHLCFQM*FDHEKV Trigger: AACCTTCTCATGATCAAAGCACATTTGAAAGCACAG...GTGTGTCACTGGGGGTGGGCTTTGAGGTTTCAGAAGCTCACACCAGGTCCAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR CCA 90 bp | CAAACAAGTAAAAGACCAATCAACCAACCAAACCATACAGAGCACACGCTTACTGCCCCCACCTGCTTCTaGATTCAGCGCTTGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QTSKRPINQPNHTEHTLTAPTCF*IQRLQL Trigger: CAGCTGCAAGCGCTGAATCCAGAAGCAGGTGGGGGC...AGTAAGCGTGTGCTCTGTATGGTTTGGTTGGTTGATTGGTCTTTTACTTGTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR CCA 90 bp | ATTGCCAAAATCACATTAAGAAAAACCACACCAGGCGTGGTGGCACACACCTTTGGGTCTGCTGGATGGTaGCCTTGTAGCCTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: IAKITLRKTTPGVVAHTFGSAGW*PCSLSP Trigger: TGGTGAAAGGCTACAAGGCCACCATCCAGCAGACCC...AAAGGTGTGTGCCACCACGCCTGGTGTGGTTTTTCTTAATGTGATTTTGGCAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTTCAGAGGTTCATCATTCAGATTATCATCATGGTGGGAGGAAGCATGGCACCAGGGTCTGCTGGATaGTGGCCTTGTAGCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QFQRFIIQIIIMVGGSMAPGSAG*WPCSLS Trigger: TGAAAGGCTACAAGGCCACCATCCAGCAGACCCTGG...TGCCATGCTTCCTCCCACCATGATGATAATCTGAATGATGAACCTCTGAAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR GCA 90 bp | GCTCCCCTATCTGCAGTAAGAAGGCAGGAAGACACTGCTAATATGTGTTCATTGGAAGCATGTGGCTCTTaGAAAAGACTGGACACCACT | + |
|
Preference number: 4 (lower is better) Translates to: APLSAVRRQEDTANMCSLEACGS*KRLDTT Trigger: AGTGGTGTCCAGTCTTTTGCAAGAGCCACATGCTTC...CAATGAACACATATTAGCAGTGTCTTCCTGCCTTCTTACTGCAGATAGGGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR CCA 90 bp | TTCTATGTGCTTCTGAGTCCCTGCTTCTCCTCGCACTCCTTCAGGACAGATGCAGACGTTGTGGTCTTTTaGATGAAATTTCAAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FYVLLSPCFSSHSFRTDADVVVF*MKFQGG Trigger: ACCACCTTGAAATTTCATCCAAAAGACCACAACGTC...TGCATCTGTCCTGAAGGAGTGCGAGGAGAAGCAGGGACTCAGAAGCACATAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR CCA 90 bp | ATTGCCAAAATCACATTAAGAAAAACCACACCAGGCGTGGTGGCACACACCTTTCTCTCATGGAAGATCTaGTTGGAGATCTTGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: IAKITLRKTTPGVVAHTFLSWKI*LEILAA Trigger: CGCTGCCAAGATCTCCAACCAGATCTTCCATGAGAG...AAAGGTGTGTGCCACCACGCCTGGTGTGGTTTTTCTTAATGTGATTTTGGCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR CCA 90 bp | CAAACAAGTAAAAGACCAATCAACCAACCAAACCATACAGAGCACACGCTTACTGATGCAAGGCGAGGCTaGGACAGGTGTACCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QTSKRPINQPNHTEHTLTDARRG*DRCTSH Trigger: ATGAGAGGTACACCTGTCCCAGCCTCGCCTTGCATC...AGTAAGCGTGTGCTCTGTATGGTTTGGTTGGTTGATTGGTCTTTTACTTGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR CCA 90 bp | GCTCCCCTATCTGCAGTAAGAAGGCAGGAAGACACTGCTAATATGTGTTCATTGCCAGGTAGTTGCCATTaGTTTGTGCAAGGAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: APLSAVRRQEDTANMCSLPGSCH*FVQGTQ Trigger: CTGTGTTCCTTGCACAAACCAATGGCAACTACCTGG...CAATGAACACATATTAGCAGTGTCTTCCTGCCTTCTTACTGCAGATAGGGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR GCA 90 bp | CAAACAAGTAAAAGACCAATCAACCAACCAAACCATACAGAGCACACGCTTACTAGCCTTTCACCACCTTaGCAGTCCTCATGTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QTSKRPINQPNHTEHTLTSLSPP*QSSCPK Trigger: CTTGGGACATGAGGACTGGCAAGGTGGTGAAAGGCT...AGTAAGCGTGTGCTCTGTATGGTTTGGTTGGTTGATTGGTCTTTTACTTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR GCA 90 bp | CAAACAAGTAAAAGACCAATCAACCAACCAAACCATACAGAGCACACGCTTACTTCAAGGTCTGTTAGGTaGAGGGCAAAGTCGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTSKRPINQPNHTEHTLTSRSVR*RAKSKP Trigger: TGGCTTCGACTTTGCCCTGCACCTAACAGACCTTGA...AGTAAGCGTGTGCTCTGTATGGTTTGGTTGGTTGATTGGTCTTTTACTTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR CCA 90 bp | CAAACAAGTAAAAGACCAATCAACCAACCAAACCATACAGAGCACACGCTTACTCTCTCATGGAAGATCTaGTTGGAGATCTTGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QTSKRPINQPNHTEHTLTLSWKI*LEILAA Trigger: CGCTGCCAAGATCTCCAACCAGATCTTCCATGAGAG...AGTAAGCGTGTGCTCTGTATGGTTTGGTTGGTTGATTGGTCTTTTACTTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS-3UTR CCA 90 bp | AGTAAAAGACCAATCAACCAACCAAACCATACAGAGCACACGCTTACTGATTGCCTGACTGTTCAAATATaGCTGGATGAACTCAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: SKRPINQPNHTEHTLTDCLTVQI*LDELRH Trigger: GTGTCTGAGTTCATCCAGCCATATTTGAACAGTCAG...GCAATCAGTAAGCGTGTGCTCTGTATGGTTTGGTTGGTTGATTGGTCTTTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR CAA 90 bp | TCACTGAAGCCCAGCAGCTCTCGGGAGCAGCCTAACCTCCGGCCGCCTACCCAGGGAACACAGGCTCCCTaGGATGCAAGGCGAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLKPSSSREQPNLRPPTQGTQAP*DARRGW Trigger: CCAGCCTCGCCTTGCATCCAAGGGAGCCTGTGTTCC...CTGGGTAGGCGGCCGGAGGTTAGGCTGCTCCCGAGAGCTGCTGGGCTTCAGTGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS CCA 90 bp | CCCAGGAGCAGGTCCCGAGGACAGAAGGCAGCACAGGATGGTAGGTaGTGCCAAGGCAGGCCTGCGTGTGCCCTTGTAGTGTGCACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PRSRSRGQKAAQDGR*CQGRPACALVVCTL Trigger: GAGCGTGCACACTACAAGGGCACACGCAGGCCTGCCTTGGCACCACCTACCATCCTGTGCTGCCTTCTGTCCTCGGGACCTGCTCCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS GCA 90 bp | ACTGAGGATGCGCCGGCCACAGGGAGACCACCGTGCAGCCCTTACTaGCTCACTGTGCACAGAGTAGGTCTGCAGGCAGTGTCCCGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TEDAPATGRPPCSPY*LTVHRVGLQAVSRV Trigger: GACTCGGGACACTGCCTGCAGACCTACTCTGTGCACAGTGAGGCAGTAAGGGCTGCACGGTGGTCTCCCTGTGGCCGGCGCATCCTCAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS GCA 90 bp | GTCGAAGCCACCACTGAGGATGCGCCGGCCACAGGGAGACCACCGTaGAGCCCTTACTGCCTCACTGTGCACAGAGTAGGTCTGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VEATTEDAPATGRPP*SPYCLTVHRVGLQA Trigger: TGCCTGCAGACCTACTCTGTGCACAGTGAGGCAGTAAGGGCTGCACGGTGGTCTCCCTGTGGCCGGCGCATCCTCAGTGGTGGCTTCGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS CCA 90 bp | CAAATATGGCTGGATGAACTCAGACACTGTGGGAGCCACACAGAGTaGGGCCGGGGCACACCCTGCAGGAGGTCCCGGGGGCTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: QIWLDELRHCGSHTE*GRGTPCRRSRGLSI Trigger: GATGGAGAGCCCCCGGGACCTCCTGCAGGGTGTGCCCCGGCCCCACTCTGTGTGGCTCCCACAGTGTCTGAGTTCATCCAGCCATATTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS TCA 90 bp | AACCCCATCCCAGACGGCCTGCTCATACCAGAGGCGTCACTTATCTaGCCTGCAGCGTCCCCACTTCTGGCAGGGTCAGCCTCGGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: NPIPDGLLIPEASLI*PAASPLLAGSASVS Trigger: CGAGACCGAGGCTGACCCTGCCAGAAGTGGGGACGCTGCAGGTCAGATAAGTGACGCCTCTGGTATGAGCAGGCCGTCTGGGATGGGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000220667.2 ENSMUST00000221377.2 |
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| CDS TCA 90 bp | GCGTGTGCCCTTGTAGTGTGCACGCTCGGCTGGCCGTGCGGAAACTaGACATCAAAACCCGGCCATCAGCGCTGCCTGTCACCAGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ACALVVCTLGWPCGN*TSKPGHQRCLSPAG Trigger: ACCTGCTGGTGACAGGCAGCGCTGATGGCCGGGTTTTGATGTTCAGTTTCCGCACGGCCAGCCGAGCGTGCACACTACAAGGGCACACGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS CCA 90 bp | CAGGCAGGTTTTAGTGGCTTAAGACAGGCAGCTGCTAGGGGCACGTaGCCGACTGGAGCCCGGCTCATCCACAGAGAAGGACGAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QAGFSGLRQAAARGT*PTGARLIHREGRGG Trigger: GCCTCCTCGTCCTTCTCTGTGGATGAGCCGGGCTCCAGTCGGCCACGTGCCCCTAGCAGCTGCCTGTCTTAAGCCACTAAAACCTGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221377.2 |
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| CDS CCA 90 bp | CAAAACCCGGCCATCAGCGCTGCCTGTCACCAGCAGGTCACCACATaGGGAACACTCACAGCCCACCGCGTAGCCTTCCACCTTGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: QNPAISAACHQQVTT*GTLTAHRVAFHLVT Trigger: GGTCACAAGGTGGAAGGCTACGCGGTGGGCTGTGAGTGTTCCCCATGTGGTGACCTGCTGGTGACAGGCAGCGCTGATGGCCGGGTTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS-3UTR CAA 90 bp | TCACTGAAGCCCAGCAGCTCTCGGGAGCAGCCTAACCTCCGGCCGCCTACCCAGATCTGGTTGGAGATCTaGGCAGCGGTCCGGAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: SLKPSSSREQPNLRPPTQIWLEI*AAVRKS Trigger: GGATTTCCGGACCGCTGCCAAGATCTCCAACCAGAT...CTGGGTAGGCGGCCGGAGGTTAGGCTGCTCCCGAGAGCTGCTGGGCTTCAGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS GCA 90 bp | CCCTGTGTGCTGTGCCCCCTCTTTGGTCACGCCCACTGTGCTAGATaGAAACCCCATCCCAGACGGCCTGCTCATACCAGAGGCGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: PCVLCPLFGHAHCAR*KPHPRRPAHTRGVT Trigger: AGTGACGCCTCTGGTATGAGCAGGCCGTCTGGGATGGGGTTTGCATCTAGCACAGTGGGCGTGACCAAAGAGGGGGCACAGCACACAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000220667.2 ENSMUST00000221377.2 |
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| CDS GCA 90 bp | CAAGACCCAGGGTCACTTCTCCAGAGCCGAGCCAGCGGCAGACGTTaGATCCCTGGGTCTTCATTAGGAGAGTTCCCTGTGTGCTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QDPGSLLQSRASGRR*IPGSSLGEFPVCCA Trigger: GGCACAGCACACAGGGAACTCTCCTAATGAAGACCCAGGGATGCAACGTCTGCCGCTGGCTCGGCTCTGGAGAAGTGACCCTGGGTCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000220667.2 ENSMUST00000221377.2 |
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| CDS CCA 90 bp | CGACTGGAGCCCGGCTCATCCACAGAGAAGGACGAGGAGGCTCACTaGGAGGGAAAGTGGTATCAGGTTCCTTTGAGGGCCACTGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RLEPGSSTEKDEEAH*EGKWYQVPLRATVA Trigger: GGCTACAGTGGCCCTCAAAGGAACCTGATACCACTTTCCCTCCCAGTGAGCCTCCTCGTCCTTCTCTGTGGATGAGCCGGGCTCCAGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221377.2 |
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| CDS-3UTR CAA 90 bp | TCACTGAAGCCCAGCAGCTCTCGGGAGCAGCCTAACCTCCGGCCGCCTACCCAGAGAAGCATGTGGCTCTaGCAAAAGACTGGACACCAC | + |
|
Preference number: 5 (lower is better) Translates to: SLKPSSSREQPNLRPPTQRSMWL*QKTGHH Trigger: GTGGTGTCCAGTCTTTTGCAAGAGCCACATGCTTCT...CTGGGTAGGCGGCCGGAGGTTAGGCTGCTCCCGAGAGCTGCTGGGCTTCAGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS CCA 90 bp | AGGGTCACTTCTCCAGAGCCGAGCCAGCGGCAGACGTTGCATCCCTaGGTCTTCATTAGGAGAGTTCCCTGTGTGCTGTGCCCCCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RVTSPEPSQRQTLHP*VFIRRVPCVLCPLF Trigger: AAAGAGGGGGCACAGCACACAGGGAACTCTCCTAATGAAGACCCAGGGATGCAACGTCTGCCGCTGGCTCGGCTCTGGAGAAGTGACCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000220667.2 ENSMUST00000221377.2 |
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| CDS CCA 90 bp | CGGAGCCCTCCTGGAGGAAGAGAATGTCCAGGGTCTGCTGGATGGTaGCCTTGTAGCCTTTCACCACCTTGCCAGTCCTCATGTCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RSPPGGRECPGSAGW*PCSLSPPCQSSCPK Trigger: CTTGGGACATGAGGACTGGCAAGGTGGTGAAAGGCTACAAGGCCACCATCCAGCAGACCCTGGACATTCTCTTCCTCCAGGAGGGCTCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS CCA 90 bp | ACTCGGAGCCCTCCTGGAGGAAGAGAATGTCCAGGGTCTGCTGGATaGTGGCCTTGTAGCCTTTCACCACCTTGCCAGTCCTCATGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TRSPPGGRECPGSAG*WPCSLSPPCQSSCP Trigger: GGGACATGAGGACTGGCAAGGTGGTGAAAGGCTACAAGGCCACCATCCAGCAGACCCTGGACATTCTCTTCCTCCAGGAGGGCTCCGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR CAA 90 bp | AGCTCCTGGGCAGTCACAAGCCCCAGAGCCTCACTGTCCGAAGGACCAGCAGGTTCATGGAAGATCTGGTaGGAGATCTTGGCAGCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSWAVTSPRASLSEGPAGSWKIW*EILAAV Trigger: GACCGCTGCCAAGATCTCCAACCAGATCTTCCATGA...ACCTGCTGGTCCTTCGGACAGTGAGGCTCTGGGGCTTGTGACTGCCCAGGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS GCA 90 bp | GAAATCCCAGGCGATAATGGTTCGGTCAGCAGAGTCCCGGGTGGATaGGTCCGTACTGCTAAGAAACTCGGAGCCCTCCTGGAGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: EIPGDNGSVSRVPGG*VRTAKKLGALLEEE Trigger: CTCTTCCTCCAGGAGGGCTCCGAGTTTCTTAGCAGTACGGACGCATCCACCCGGGACTCTGCTGACCGAACCATTATCGCCTGGGATTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS-3UTR CAA 90 bp | TATCATCATGGTGGGAGGAAGCATGGCAGAGTGCGGGCATGGCGCTGGAGCAGTATCTGGTTGGAGATCTaGGCAGCGGTCCGGAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: YHHGGRKHGRVRAWRWSSIWLEI*AAVRKS Trigger: GGATTTCCGGACCGCTGCCAAGATCTCCAACCAGAT...ACTGCTCCAGCGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS-3UTR CAA 90 bp | CGCCGAGACGGCTTCTCACCCCCATGCTATAGCCGAGTCACTGAAGCCCAGCAGGTAGTTGCCATTGGTTaGTGCAAGGAACACAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RRDGFSPPCYSRVTEAQQVVAIG*CKEHRL Trigger: GAGCCTGTGTTCCTTGCACAAACCAATGGCAACTAC...CTGCTGGGCTTCAGTGACTCGGCTATAGCATGGGGGTGAGAAGCCGTCTCGGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS-3UTR CAA 90 bp | TATCATCATGGTGGGAGGAAGCATGGCAGAGTGCGGGCATGGCGCTGGAGCAGTTGGTATCAGGTTCCTTaGAGGGCCACTGTAGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: YHHGGRKHGRVRAWRWSSWYQVP*RATVAS Trigger: AGAGGCTACAGTGGCCCTCAAAGGAACCTGATACCA...ACTGCTCCAGCGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR CAA 90 bp | AGCTCCTGGGCAGTCACAAGCCCCAGAGCCTCACTGTCCGAAGGACCAGCAGGTCTGACCACTAAACACTaGGGTTCCTGTTTCAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSWAVTSPRASLSEGPAGLTTKH*GSCFKV Trigger: GACCTTGAAACAGGAACCCAAGTGTTTAGTGGTCAG...ACCTGCTGGTCCTTCGGACAGTGAGGCTCTGGGGCTTGTGACTGCCCAGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR CAA 90 bp | TATCATCATGGTGGGAGGAAGCATGGCAGAGTGCGGGCATGGCGCTGGAGCAGTAGAAGCATGTGGCTCTaGCAAAAGACTGGACACCAC | + |
|
Preference number: 5 (lower is better) Translates to: YHHGGRKHGRVRAWRWSSRSMWL*QKTGHH Trigger: GTGGTGTCCAGTCTTTTGCAAGAGCCACATGCTTCT...ACTGCTCCAGCGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS CCA 90 bp | TTTGTCCATGGAAGCAGAGAGAAGCATGTGGCTCTTGCAAAAGACTaGACACCACTGAATGCTGTTGACCGGGCCCCTGTGGCCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FVHGSREKHVALAKD*TPLNAVDRAPVASK Trigger: CTTCGAGGCCACAGGGGCCCGGTCAACAGCATTCAGTGGTGTCCAGTCTTTTGCAAGAGCCACATGCTTCTCTCTGCTTCCATGGACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS CCA 90 bp | AGCCAGGTAGTTGCCATTGGTTTGTGCAAGGAACACAGGCTCCCTTaGATGCAAGGCGAGGCTGGGACAGGTGTACCTCTCATGGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SQVVAIGLCKEHRLP*MQGEAGTGVPLMED Trigger: ATCTTCCATGAGAGGTACACCTGTCCCAGCCTCGCCTTGCATCCAAGGGAGCCTGTGTTCCTTGCACAAACCAATGGCAACTACCTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS-3UTR CAA 90 bp | AGATTATCATCATGGTGGGAGGAAGCATGGCAGAGTGCGGGCATGGCGCTGGAGTGGAAAAGCACTTTCTaGGGGACCGTAGTCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLSSWWEEAWQSAGMALEWKSTF*GTVVSL Trigger: CAGAGAGACTACGGTCCCCAAGAAAGTGCTTTTCCA...CTCCAGCGCCATGCCCGCACTCTGCCATGCTTCCTCCCACCATGATGATAATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR CAA 90 bp | ACCTGGTGTGAGCTTCTGAAACCTCAAAGCCCACCCCCAGTGACACACTTCCTCTCATGGAAGATCTGGTaGGAGATCTTGGCAGCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TWCELLKPQSPPPVTHFLSWKIW*EILAAV Trigger: GACCGCTGCCAAGATCTCCAACCAGATCTTCCATGA...GAGGAAGTGTGTCACTGGGGGTGGGCTTTGAGGTTTCAGAAGCTCACACCAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS-3UTR CAA 90 bp | GCTCCCCTATCTGCAGTAAGAAGGCAGGAAGACACTGCTAATATGTGTTCATTGGGGGGCTCTCCATCTTaGCCCCCACCTGCTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: APLSAVRRQEDTANMCSLGGSPS*PPPASG Trigger: TCCAGAAGCAGGTGGGGGCAAAGATGGAGAGCCCCC...CAATGAACACATATTAGCAGTGTCTTCCTGCCTTCTTACTGCAGATAGGGGAGC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS CCA 90 bp | CACTTTCTTGGGGACCGTAGTCTCTCTGTACTGACTGTTCAAATATaGCTGGATGAACTCAGACACTGTGGGAGCCACACAGAGTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HFLGDRSLSVLTVQI*LDELRHCGSHTEWG Trigger: GCCCCACTCTGTGTGGCTCCCACAGTGTCTGAGTTCATCCAGCCATATTTGAACAGTCAGTACAGAGAGACTACGGTCCCCAAGAAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR CAA 90 bp | GCAGTGGGCAGGCAGCAAGTTAGAGGACCAGAGGTGGGTAGGAAGAAACACAGTCACACCTTGAAGGTTTaGTCCATGGAAGCAGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: AVGRQQVRGPEVGRKKHSHTLKV*SMEAER Trigger: TCTCTCTGCTTCCATGGACAAAACCTTCAAGGTGTG...ACTGTGTTTCTTCCTACCCACCTCTGGTCCTCTAACTTGCTGCCTGCCCACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR CAA 90 bp | ACCTGGTGTGAGCTTCTGAAACCTCAAAGCCCACCCCCAGTGACACACTTCCTCCACACCTTGAAGGTTTaGTCCATGGAAGCAGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TWCELLKPQSPPPVTHFLHTLKV*SMEAER Trigger: TCTCTCTGCTTCCATGGACAAAACCTTCAAGGTGTG...GAGGAAGTGTGTCACTGGGGGTGGGCTTTGAGGTTTCAGAAGCTCACACCAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR CAA 90 bp | ACATGCCACACTTCCTTCTATGTGCTTCTGAGTCCCTGCTTCTCCTCGCACTCCCTCATGTCCCAAGCTTaGATTTCAGAGCTGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TCHTSFYVLLSPCFSSHSLMSQA*ISELKP Trigger: CGGCTTCAGCTCTGAAATCAAAGCTTGGGACATGAG...GGAGTGCGAGGAGAAGCAGGGACTCAGAAGCACATAGAAGGAAGTGTGGCATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR CAA 90 bp | TTCTATGTGCTTCTGAGTCCCTGCTTCTCCTCGCACTCCTTCAGGACAGATGCATCATGGAAGATCTGGTaGGAGATCTTGGCAGCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FYVLLSPCFSSHSFRTDASWKIW*EILAAV Trigger: GACCGCTGCCAAGATCTCCAACCAGATCTTCCATGA...TGCATCTGTCCTGAAGGAGTGCGAGGAGAAGCAGGGACTCAGAAGCACATAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR CAA 90 bp | ATTGCCAAAATCACATTAAGAAAAACCACACCAGGCGTGGTGGCACACACCTTTGGAACACAGGCTCCCTaGGATGCAAGGCGAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IAKITLRKTTPGVVAHTFGTQAP*DARRGW Trigger: CCAGCCTCGCCTTGCATCCAAGGGAGCCTGTGTTCC...AAAGGTGTGTGCCACCACGCCTGGTGTGGTTTTTCTTAATGTGATTTTGGCAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS-3UTR CAA 90 bp | GCACTCCTTCAGGACAGATGCATAGCTTTGCCCACCACAGACCACCCACCTGGCGCTTTCAAATGTGCTTaGATCATGAGAAGGTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ALLQDRCIALPTTDHPPGAFKCA*IMRRFE Trigger: CTCAAACCTTCTCATGATCAAAGCACATTTGAAAGC...GCCAGGTGGGTGGTCTGTGGTGGGCAAAGCTATGCATCTGTCCTGAAGGAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR CAA 90 bp | AGTAAAAGACCAATCAACCAACCAAACCATACAGAGCACACGCTTACTGATTGCGGAACACAGGCTCCCTaGGATGCAAGGCGAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SKRPINQPNHTEHTLTDCGTQAP*DARRGW Trigger: CCAGCCTCGCCTTGCATCCAAGGGAGCCTGTGTTCC...GCAATCAGTAAGCGTGTGCTCTGTATGGTTTGGTTGGTTGATTGGTCTTTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS TCA 90 bp | CGAAGGTGGAAAAGCACTTTCTTGGGGACCGTAGTCTCTCTGTACTaGCTGTTCAAATATGGCTGGATGAACTCAGACACTGTGGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RRWKSTFLGTVVSLY*LFKYGWMNSDTVGA Trigger: GGCTCCCACAGTGTCTGAGTTCATCCAGCCATATTTGAACAGTCAGTACAGAGAGACTACGGTCCCCAAGAAAGTGCTTTTCCACCTTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS-3UTR CAA 90 bp | ACCTGGTGTGAGCTTCTGAAACCTCAAAGCCCACCCCCAGTGACACACTTCCTCAGACGTTGTGGTCTTTaGGATGAAATTTCAAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TWCELLKPQSPPPVTHFLRRCGL*DEISRW Trigger: CCACCTTGAAATTTCATCCAAAAGACCACAACGTCT...GAGGAAGTGTGTCACTGGGGGTGGGCTTTGAGGTTTCAGAAGCTCACACCAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR CAA 90 bp | CAGCAGGTGACAGTCCCATCTCAAGCTCCCCTATCTGCAGTAAGAAGGCAGGAAGCTTTCAAATGTGCTTaGATCATGAGAAGGTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QQVTVPSQAPLSAVRRQEAFKCA*IMRRFE Trigger: CTCAAACCTTCTCATGATCAAAGCACATTTGAAAGC...TTCCTGCCTTCTTACTGCAGATAGGGGAGCTTGAGATGGGACTGTCACCTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR CAA 90 bp | TTCTATGTGCTTCTGAGTCCCTGCTTCTCCTCGCACTCCTTCAGGACAGATGCAAGACGTTGTGGTCTTTaGGATGAAATTTCAAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FYVLLSPCFSSHSFRTDARRCGL*DEISRW Trigger: CCACCTTGAAATTTCATCCAAAAGACCACAACGTCT...TGCATCTGTCCTGAAGGAGTGCGAGGAGAAGCAGGGACTCAGAAGCACATAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR CAA 90 bp | GCTCCCCTATCTGCAGTAAGAAGGCAGGAAGACACTGCTAATATGTGTTCATTGCTCATGTCCCAAGCTTaGATTTCAGAGCTGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: APLSAVRRQEDTANMCSLLMSQA*ISELKP Trigger: CGGCTTCAGCTCTGAAATCAAAGCTTGGGACATGAG...CAATGAACACATATTAGCAGTGTCTTCCTGCCTTCTTACTGCAGATAGGGGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR CAA 90 bp | ATCCTTTCCAACAGTTCCACTCCCTACATGCCACACTTCCTTCTATGTGCTTCTGTAGTTGCCATTGGTTaGTGCAAGGAACACAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ILSNSSTPYMPHFLLCASVVAIG*CKEHRL Trigger: GAGCCTGTGTTCCTTGCACAAACCAATGGCAACTAC...AGAAGCACATAGAAGGAAGTGTGGCATGTAGGGAGTGGAACTGTTGGAAAGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS-3UTR CAA 90 bp | AGTAAAAGACCAATCAACCAACCAAACCATACAGAGCACACGCTTACTGATTGCTGGTATCAGGTTCCTTaGAGGGCCACTGTAGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SKRPINQPNHTEHTLTDCWYQVP*RATVAS Trigger: AGAGGCTACAGTGGCCCTCAAAGGAACCTGATACCA...GCAATCAGTAAGCGTGTGCTCTGTATGGTTTGGTTGGTTGATTGGTCTTTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR CAA 90 bp | CAGTTTCAGAGGTTCATCATTCAGATTATCATCATGGTGGGAGGAAGCATGGCATGGAAAAGCACTTTCTaGGGGACCGTAGTCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QFQRFIIQIIIMVGGSMAWKSTF*GTVVSL Trigger: CAGAGAGACTACGGTCCCCAAGAAAGTGCTTTTCCA...TGCCATGCTTCCTCCCACCATGATGATAATCTGAATGATGAACCTCTGAAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS-3UTR CAA 90 bp | AGTAAAAGACCAATCAACCAACCAAACCATACAGAGCACACGCTTACTGATTGCGTAGTTGCCATTGGTTaGTGCAAGGAACACAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SKRPINQPNHTEHTLTDCVVAIG*CKEHRL Trigger: GAGCCTGTGTTCCTTGCACAAACCAATGGCAACTAC...GCAATCAGTAAGCGTGTGCTCTGTATGGTTTGGTTGGTTGATTGGTCTTTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS-3UTR CAA 90 bp | CAAACAAGTAAAAGACCAATCAACCAACCAAACCATACAGAGCACACGCTTACTCTGACCACTAAACACTaGGGTTCCTGTTTCAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QTSKRPINQPNHTEHTLTLTTKH*GSCFKV Trigger: GACCTTGAAACAGGAACCCAAGTGTTTAGTGGTCAG...AGTAAGCGTGTGCTCTGTATGGTTTGGTTGGTTGATTGGTCTTTTACTTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS CAA 72 bp | GCACACCCTGCAGGAGGTCCCGGGGGCTCTCCATCTTaGCCCCCACCTGCTTCTGGATTCAGCGCTTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AHPAGGPGGSPS*PPPASGFSACS Trigger: GCTGCAAGCGCTGAATCCAGAAGCAGGTGGGGGCAAAGATGGAGAGCCCCCGGGACCTCCTGCAGGGTGTGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS GCA 72 bp | TGCAGGCAGTGTCCCGAGTCCACAGCATTCCACACCTaGAGCGTCCCCACTTCTGGCAGGGTCAGCCTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: CRQCPESTAFHT*SVPTSGRVSLG Trigger: ACCGAGGCTGACCCTGCCAGAAGTGGGGACGCTGCAGGTGTGGAATGCTGTGGACTCGGGACACTGCCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220495.2 |
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| CDS CCA 72 bp | GCCATCAGCGCTGCCTGTCACCAGCAGGTCACCACATaGGGAACACTCACAGCCCACCGCGTAGCCTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: AISAACHQQVTT*GTLTAHRVAFH Trigger: GTGGAAGGCTACGCGGTGGGCTGTGAGTGTTCCCCATGTGGTGACCTGCTGGTGACAGGCAGCGCTGATGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS TCA 72 bp | CCAGACGGCCTGCTCATACCAGAGGCGTCACTTATCTaGCCTGCAGCGTCCCCACTTCTGGCAGGGTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PDGLLIPEASLI*PAASPLLAGSA Trigger: GGCTGACCCTGCCAGAAGTGGGGACGCTGCAGGTCAGATAAGTGACGCCTCTGGTATGAGCAGGCCGTCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000220667.2 ENSMUST00000221377.2 |
||
| CDS GCA 72 bp | ACCACTGAGGATGCGCCGGCCACAGGGAGACCACCGTaGAGCCCTTACTGCCTCACTGTGCACAGAGTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TTEDAPATGRPP*SPYCLTVHRVG Trigger: ACCTACTCTGTGCACAGTGAGGCAGTAAGGGCTGCACGGTGGTCTCCCTGTGGCCGGCGCATCCTCAGTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS GCA 72 bp | TCCCGAGGACAGAAGGCAGCACAGGATGGTAGGTGGTaGCAAGGCAGGCCTGCGTGTGCCCTTGTAGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SRGQKAAQDGRW*QGRPACALVVC Trigger: GCACACTACAAGGGCACACGCAGGCCTGCCTTGGCACCACCTACCATCCTGTGCTGCCTTCTGTCCTCGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS CCA 72 bp | AGGTCCCGAGGACAGAAGGCAGCACAGGATGGTAGGTaGTGCCAAGGCAGGCCTGCGTGTGCCCTTGTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RSRGQKAAQDGR*CQGRPACALVV Trigger: CACTACAAGGGCACACGCAGGCCTGCCTTGGCACCACCTACCATCCTGTGCTGCCTTCTGTCCTCGGGACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS TCA 72 bp | CTTGTAGTGTGCACGCTCGGCTGGCCGTGCGGAAACTaGACATCAAAACCCGGCCATCAGCGCTGCCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LVVCTLGWPCGN*TSKPGHQRCLS Trigger: TGACAGGCAGCGCTGATGGCCGGGTTTTGATGTTCAGTTTCCGCACGGCCAGCCGAGCGTGCACACTACAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS GCA 72 bp | CTGTGCCCCCTCTTTGGTCACGCCCACTGTGCTAGATaGAAACCCCATCCCAGACGGCCTGCTCATACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LCPLFGHAHCAR*KPHPRRPAHTR Trigger: TCTGGTATGAGCAGGCCGTCTGGGATGGGGTTTGCATCTAGCACAGTGGGCGTGACCAAAGAGGGGGCACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000220667.2 ENSMUST00000221377.2 |
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| CDS GCA 72 bp | GGGTCACTTCTCCAGAGCCGAGCCAGCGGCAGACGTTaGATCCCTGGGTCTTCATTAGGAGAGTTCCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GSLLQSRASGRR*IPGSSLGEFPV Trigger: CACAGGGAACTCTCCTAATGAAGACCCAGGGATGCAACGTCTGCCGCTGGCTCGGCTCTGGAGAAGTGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000220667.2 ENSMUST00000221377.2 |
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| CDS GCA 72 bp | GGCGATAATGGTTCGGTCAGCAGAGTCCCGGGTGGATaGGTCCGTACTGCTAAGAAACTCGGAGCCCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GDNGSVSRVPGG*VRTAKKLGALL Trigger: CAGGAGGGCTCCGAGTTTCTTAGCAGTACGGACGCATCCACCCGGGACTCTGCTGACCGAACCATTATCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS CCA 72 bp | CCCGGCTCATCCACAGAGAAGGACGAGGAGGCTCACTaGGAGGGAAAGTGGTATCAGGTTCCTTTGAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PGSSTEKDEEAH*EGKWYQVPLRA Trigger: GGCCCTCAAAGGAACCTGATACCACTTTCCCTCCCAGTGAGCCTCCTCGTCCTTCTCTGTGGATGAGCCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221377.2 |
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| CDS CAA 90 bp | CCTGGGTCTTCATTAGGAGAGTTCCCTGTGTGCTGTGCCCCCTCTTaGGTCACGCCCACTGTGCTAGATGCAAACCCCATCCCAGACGGC | + |
|
Preference number: 6 (lower is better) Translates to: PGSSLGEFPVCCAPS*VTPTVLDANPIPDG Trigger: GCCGTCTGGGATGGGGTTTGCATCTAGCACAGTGGGCGTGACCAAAGAGGGGGCACAGCACACAGGGAACTCTCCTAATGAAGACCCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000220667.2 ENSMUST00000221377.2 |
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| CDS CAA 90 bp | ACAAGACCCAGGGTCACTTCTCCAGAGCCGAGCCAGCGGCAGACGTaGCATCCCTGGGTCTTCATTAGGAGAGTTCCCTGTGTGCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: TRPRVTSPEPSQRQT*HPWVFIRRVPCVLC Trigger: GCACAGCACACAGGGAACTCTCCTAATGAAGACCCAGGGATGCAACGTCTGCCGCTGGCTCGGCTCTGGAGAAGTGACCCTGGGTCTTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000220667.2 ENSMUST00000221377.2 |
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| CDS GCA 72 bp | CCCTGGGTCTTCATTAGGAGAGTTCCCTGTGTGCTGTaGCCCCTCTTTGGTCACGCCCACTGTGCTAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: PWVFIRRVPCVL*PLFGHAHCARC Trigger: GCATCTAGCACAGTGGGCGTGACCAAAGAGGGGGCACAGCACACAGGGAACTCTCCTAATGAAGACCCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000220667.2 ENSMUST00000221377.2 |
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| CDS CCA 72 bp | GGCTGGGACAGGTGTACCTCTCATGGAAGATCTGGTTaGAGATCTTGGCAGCGGTCCGGAAATCCCAGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: GWDRCTSHGRSG*RSWQRSGNPRR Trigger: TCGCCTGGGATTTCCGGACCGCTGCCAAGATCTCCAACCAGATCTTCCATGAGAGGTACACCTGTCCCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS CAA 72 bp | AGGGTCACTTCTCCAGAGCCGAGCCAGCGGCAGACGTaGCATCCCTGGGTCTTCATTAGGAGAGTTCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RVTSPEPSQRQT*HPWVFIRRVPC Trigger: ACAGGGAACTCTCCTAATGAAGACCCAGGGATGCAACGTCTGCCGCTGGCTCGGCTCTGGAGAAGTGACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000220667.2 ENSMUST00000221377.2 |
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| CDS CAA 72 bp | AGGCTGGGACAGGTGTACCTCTCATGGAAGATCTGGTaGGAGATCTTGGCAGCGGTCCGGAAATCCCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RLGQVYLSWKIW*EILAAVRKSQA Trigger: CGCCTGGGATTTCCGGACCGCTGCCAAGATCTCCAACCAGATCTTCCATGAGAGGTACACCTGTCCCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS TCA 72 bp | AGAAGCATGTGGCTCTTGCAAAAGACTGGACACCACTaGATGCTGTTGACCGGGCCCCTGTGGCCTCGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSMWLLQKTGHH*MLLTGPLWPRR Trigger: CCTTCGAGGCCACAGGGGCCCGGTCAACAGCATTCAGTGGTGTCCAGTCTTTTGCAAGAGCCACATGCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS CCA 72 bp | CCTGGAGGAAGAGAATGTCCAGGGTCTGCTGGATGGTaGCCTTGTAGCCTTTCACCACCTTGCCAGTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PGGRECPGSAGW*PCSLSPPCQSS Trigger: TGAGGACTGGCAAGGTGGTGAAAGGCTACAAGGCCACCATCCAGCAGACCCTGGACATTCTCTTCCTCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS CCA 72 bp | GTTGCCATTGGTTTGTGCAAGGAACACAGGCTCCCTTaGATGCAAGGCGAGGCTGGGACAGGTGTACCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VAIGLCKEHRLP*MQGEAGTGVPL Trigger: GAGAGGTACACCTGTCCCAGCCTCGCCTTGCATCCAAGGGAGCCTGTGTTCCTTGCACAAACCAATGGCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS CAA 90 bp | AGGCTGGGACAGGTGTACCTCTCATGGAAGATCTGGTTGGAGATCTaGGCAGCGGTCCGGAAATCCCAGGCGATAATGGTTCGGTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RLGQVYLSWKIWLEI*AAVRKSQAIMVRSA Trigger: TGCTGACCGAACCATTATCGCCTGGGATTTCCGGACCGCTGCCAAGATCTCCAACCAGATCTTCCATGAGAGGTACACCTGTCCCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS CAA 90 bp | GAGCCAGGTAGTTGCCATTGGTTTGTGCAAGGAACACAGGCTCCCTaGGATGCAAGGCGAGGCTGGGACAGGTGTACCTCTCATGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: EPGSCHWFVQGTQAP*DARRGWDRCTSHGR Trigger: TCTTCCATGAGAGGTACACCTGTCCCAGCCTCGCCTTGCATCCAAGGGAGCCTGTGTTCCTTGCACAAACCAATGGCAACTACCTGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS GCA 72 bp | AGCCTTCCACCTTGTGACCTTCGTAGCGTCTCCGTCTaGTCATCCGATAGGGCCACACAGAGGAAAAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SLPPCDLRSVSV*SSDRATQRKRE Trigger: CTCTCTTTTCCTCTGTGTGGCCCTATCGGATGAGCAGACGGAGACGCTACGAAGGTCACAAGGTGGAAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS CAA 72 bp | TCATTAGGAGAGTTCCCTGTGTGCTGTGCCCCCTCTTaGGTCACGCCCACTGTGCTAGATGCAAACCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: SLGEFPVCCAPS*VTPTVLDANPI Trigger: GATGGGGTTTGCATCTAGCACAGTGGGCGTGACCAAAGAGGGGGCACAGCACACAGGGAACTCTCCTAATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000220667.2 ENSMUST00000221377.2 |
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| CDS CAA 72 bp | AGTTGCCATTGGTTTGTGCAAGGAACACAGGCTCCCTaGGATGCAAGGCGAGGCTGGGACAGGTGTACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SCHWFVQGTQAP*DARRGWDRCTS Trigger: AGAGGTACACCTGTCCCAGCCTCGCCTTGCATCCAAGGGAGCCTGTGTTCCTTGCACAAACCAATGGCAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS CCA 72 bp | CTTCTGGATTCAGCGCTTGCAGCTGCCTTAGCCTCTTaGGGATATAGGGAAGCACACAGTCCTCACCCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LLDSALAAALAS*GYREAHSPHPF Trigger: AAAGGGGTGAGGACTGTGTGCTTCCCTATATCCCCAAGAGGCTAAGGCAGCTGCAAGCGCTGAATCCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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| CDS GCA 72 bp | AGAGGAAAAGAGAGCCAGGTAGTTGCCATTGGTTTGTaGAAGGAACACAGGCTCCCTTGGATGCAAGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: RGKESQVVAIGL*KEHRLPWMQGE Trigger: CTCGCCTTGCATCCAAGGGAGCCTGTGTTCCTTGCACAAACCAATGGCAACTACCTGGCTCTCTTTTCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS CAA 72 bp | CAGGTGTACCTCTCATGGAAGATCTGGTTGGAGATCTaGGCAGCGGTCCGGAAATCCCAGGCGATAATGGTT | + |
|
Preference number: 6 (lower is better) Translates to: QVYLSWKIWLEI*AAVRKSQAIMV Trigger: AACCATTATCGCCTGGGATTTCCGGACCGCTGCCAAGATCTCCAACCAGATCTTCCATGAGAGGTACACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
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| CDS CAA 72 bp | CACAGAGGAAAAGAGAGCCAGGTAGTTGCCATTGGTTaGTGCAAGGAACACAGGCTCCCTTGGATGCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: HRGKESQVVAIG*CKEHRLPWMQG Trigger: GCCTTGCATCCAAGGGAGCCTGTGTTCCTTGCACAAACCAATGGCAACTACCTGGCTCTCTTTTCCTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 ENSMUST00000221510.2 |
||
| CDS CCA 72 bp | CCTGGAGGAAGAGAATGTCCAGGGTCTGCTGGATGGTaGCCTTGTAGCCTTTCACCACTTTGTAGATTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PGGRECPGSAGW*PCSLSPLCRFH Trigger: GTGAAATCTACAAAGTGGTGAAAGGCTACAAGGCCACCATCCAGCAGACCCTGGACATTCTCTTCCTCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221510.2 |
||
| CDS CAA 72 bp | AGAGCTGGCATTTCCAGCTGTGCTTTCAAATGTGCTTaGATCATGAGAAGGTTTGAGGACGTCCCAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RAGISSCAFKCA*IMRRFEDVPGR Trigger: CCTGCCTGGGACGTCCTCAAACCTTCTCATGATCAAAGCACATTTGAAAGCACAGCTGGAAATGCCAGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
||
| CDS TCA 72 bp | AAAAGCACTTTCTTGGGGACCGTAGTCTCTCTGTACTaGCTGTTCAAATATGGCTGGATGAACTCAGACACT | + |
|
Preference number: 6 (lower is better) Translates to: KSTFLGTVVSLY*LFKYGWMNSDT Trigger: AGTGTCTGAGTTCATCCAGCCATATTTGAACAGTCAGTACAGAGAGACTACGGTCCCCAAGAAAGTGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047115.9 ENSMUST00000167816.8 |
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