Pregenerated sensors for WDR18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035754Ensembl transcript IDs: ENSMUST00000045247.9
Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGAGAGCCATCGGTCTCTGCATCTGGAGGGCTGGGGTTGTGCGTaGACGTGGGTGCGCGCCTCCATGCCTGTGAAACCACTGCTCTCG | + |
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Preference number: 1 (lower is better) Translates to: RESHRSLHLEGWGCA*TWVRASMPVKPLLS Trigger: CGAGAGCAGTGGTTTCACAGGCATGGAGGCGCGCACCCACGTGCACGCACAACCCCAGCCCTCCAGATGCAGAGACCGATGGCTCTCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR CCA 90 bp | AGCCATCGGTCTCTGCATCTGGAGGGCTGGGGTTGTGCGTGCACGTaGGTGCGCGCCTCCATGCCTGTGAAACCACTGCTCTCGAGATCA | + |
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Preference number: 1 (lower is better) Translates to: SHRSLHLEGWGCACT*VRASMPVKPLLSRS Trigger: TGATCTCGAGAGCAGTGGTTTCACAGGCATGGAGGCGCGCACCCACGTGCACGCACAACCCCAGCCCTCCAGATGCAGAGACCGATGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR CCA 90 bp | CCCTGCCTTCCAAGCCAGCCTGGGCTAGTGAGGTTCTGGCTTGGATaGGGGAAGTACAGGCAGATGGTCTCTCAGTCCAGCCACAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: PCLPSQPGLVRFWLG*GKYRQMVSQSSHSR Trigger: CCTGCTGTGGCTGGACTGAGAGACCATCTGCCTGTACTTCCCCCATCCAAGCCAGAACCTCACTAGCCCAGGCTGGCTTGGAAGGCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR CCA 90 bp | AGGCTGACCCTTAACTCTTTAGAGAGAGCCATCGGTCTCTGCATCTaGAGGGCTGGGGTTGTGCGTGCACGTGGGTGCGCGCCTCCATGC | + |
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Preference number: 1 (lower is better) Translates to: RLTLNSLERAIGLCI*RAGVVRARGCAPPC Trigger: GCATGGAGGCGCGCACCCACGTGCACGCACAACCCCAGCCCTCCAGATGCAGAGACCGATGGCTCTCTCTAAAGAGTTAAGGGTCAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR GCA 90 bp | CCCACTCCTGTTGCCCGAGGAAGTTTATGGGGGCTTGGTGCAGGCTaGCCCACTGCTCAGGAGACTGGGGACTTAGATCTTGCTTGGCAT | + |
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Preference number: 1 (lower is better) Translates to: PTPVARGSLWGLGAG*PTAQETGDLDLAWH Trigger: ATGCCAAGCAAGATCTAAGTCCCCAGTCTCCTGAGCAGTGGGGCAGCCTGCACCAAGCCCCCATAAACTTCCTCGGGCAACAGGAGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR GCA 90 bp | CACTTGTTATCCCAAACGTGGCCTGTAGGATCAGGGAACAGAGGCTaGCCCAGCCAGGAGGCTCCTGCTGGGAATTCTGAGGTCTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: HLLSQTWPVGSGNRG*PSQEAPAGNSEVCP Trigger: AGGACAGACCTCAGAATTCCCAGCAGGAGCCTCCTGGCTGGGGCAGCCTCTGTTCCCTGATCCTACAGGCCACGTTTGGGATAACAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR GCA 90 bp | ATACAGCAAGGCTTAGTAAGGAGGCTGGGACAGATGAAGCAGATCTaGAGGGGGACCCTGCCTTCCAAGCCAGCCTGGGCTAGTGAGGTT | + |
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Preference number: 1 (lower is better) Translates to: IQQGLVRRLGQMKQI*RGTLPSKPAWASEV Trigger: AACCTCACTAGCCCAGGCTGGCTTGGAAGGCAGGGTCCCCCTGCAGATCTGCTTCATCTGTCCCAGCCTCCTTACTAAGCCTTGCTGTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR CCA 90 bp | TCTCAAGAGACCTCCAGAGGCCTTTGGTTGGGTCCTGGGGACCCATaGCTGGTAGAGTGCATACCTTCTTGTCTCTCTCCAGACCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: SQETSRGLWLGPGDP*LVECIPSCLSPDLP Trigger: GGGAAGGTCTGGAGAGAGACAAGAAGGTATGCACTCTACCAGCCATGGGTCCCCAGGACCCAACCAAAGGCCTCTGGAGGTCTCTTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR CCA 90 bp | GAACACCCAGTCTCAAGAGACCTCCAGAGGCCTTTGGTTGGGTCCTaGGGACCCATGGCTGGTAGAGTGCATACCTTCTTGTCTCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: EHPVSRDLQRPLVGS*GPMAGRVHTFLSLS Trigger: GGAGAGAGACAAGAAGGTATGCACTCTACCAGCCATGGGTCCCCAGGACCCAACCAAAGGCCTCTGGAGGTCTCTTGAGACTGGGTGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR GCA 90 bp | TGTCCTCACAGACGCTCTGGAAGATGTGGCATTCCCCCAAAATCCTaGACTGCAGCTGCCTGCAGGGAACACTCAGCCCTGATGAATGAA | + |
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Preference number: 1 (lower is better) Translates to: CPHRRSGRCGIPPKS*TAAACREHSALMNE Trigger: TTCATTCATCAGGGCTGAGTGTTCCCTGCAGGCAGCTGCAGTGCAGGATTTTGGGGGAATGCCACATCTTCCAGAGCGTCTGTGAGGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR CCA 90 bp | CACCCAGACCGTGCATCACATCCCTCTCATGTGCTCGACTTCCTATaGACTCATTTAGTGACCACTGCCCCTGTCAGTTCAGGGAGCACA | + |
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Preference number: 1 (lower is better) Translates to: HPDRASHPSHVLDFL*THLVTTAPVSSGST Trigger: TGTGCTCCCTGAACTGACAGGGGCAGTGGTCACTAAATGAGTCCATAGGAAGTCGAGCACATGAGAGGGATGTGATGCACGGTCTGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR CCA 90 bp | AAGTTTATGGGGGCTTGGTGCAGGCTGCCCCACTGCTCAGGAGACTaGGGACTTAGATCTTGCTTGGCATTCACCCAGCCTAGTATTTAC | + |
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Preference number: 1 (lower is better) Translates to: KFMGAWCRLPHCSGD*GLRSCLAFTQPSIY Trigger: GTAAATACTAGGCTGGGTGAATGCCAAGCAAGATCTAAGTCCCCAGTCTCCTGAGCAGTGGGGCAGCCTGCACCAAGCCCCCATAAACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR CCA 90 bp | TTTAATGAGATGGCTTGGCTCAAGATGGCAGGCTGTCTAGGCACCTaGCCAGGGATCCAAAGGACATCAGGCTTGGGGTCCTTTAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: FNEMAWLKMAGCLGT*PGIQRTSGLGSFRV Trigger: AACCCTAAAGGACCCCAAGCCTGATGTCCTTTGGATCCCTGGCCAGGTGCCTAGACAGCCTGCCATCTTGAGCCAAGCCATCTCATTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR GCA 90 bp | TCTGGAAGATGTGGCATTCCCCCAAAATCCTGCACTGCAGCTGCCTaGAGGGAACACTCAGCCCTGATGAATGAATCTACACTTGGTCAG | + |
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Preference number: 1 (lower is better) Translates to: SGRCGIPPKSCTAAA*REHSALMNESTLGQ Trigger: CTGACCAAGTGTAGATTCATTCATCAGGGCTGAGTGTTCCCTGCAGGCAGCTGCAGTGCAGGATTTTGGGGGAATGCCACATCTTCCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR CCA 90 bp | GCAGGCTGCCCCACTGCTCAGGAGACTGGGGACTTAGATCTTGCTTaGCATTCACCCAGCCTAGTATTTACAAAGGCTGAATTCTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: AGCPTAQETGDLDLA*HSPSLVFTKAEFSS Trigger: ACTGGAGAATTCAGCCTTTGTAAATACTAGGCTGGGTGAATGCCAAGCAAGATCTAAGTCCCCAGTCTCCTGAGCAGTGGGGCAGCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR TCA 90 bp | AAGGCTGAATTCTCCAGTCAGTGCGGGGAAGCTGAGGCAGACAAATaGGGGAATACAGCAAGGCTTAGTAAGGAGGCTGGGACAGATGAA | + |
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Preference number: 1 (lower is better) Translates to: KAEFSSQCGEAEADK*GNTARLSKEAGTDE Trigger: TTCATCTGTCCCAGCCTCCTTACTAAGCCTTGCTGTATTCCCTCATTTGTCTGCCTCAGCTTCCCCGCACTGACTGGAGAATTCAGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR TCA 90 bp | AGTTATGGCTCCACCCAACATCTGCCACTGTCCCTAGCCAGAATCTaGGACATAATTAGGAGTATAATGAACACCCAGTCTCAAGAGACC | + |
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Preference number: 1 (lower is better) Translates to: SYGSTQHLPLSLARI*DIIRSIMNTQSQET Trigger: GGTCTCTTGAGACTGGGTGTTCATTATACTCCTAATTATGTCTCAGATTCTGGCTAGGGACAGTGGCAGATGTTGGGTGGAGCCATAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR TCA 90 bp | AGTGTTGGTGCTAGGAACCAAATCGAGTTCTTTACAAAAGCAGTCTaGACCAACCATGGAGAAATCTTTCTGCTTTCCAGAACTCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: SVGARNQIEFFTKAV*TNHGEIFLLSRTLL Trigger: AAGAAGAGTTCTGGAAAGCAGAAAGATTTCTCCATGGTTGGTTCAGACTGCTTTTGTAAAGAACTCGATTTGGTTCCTAGCACCAACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR GCA 90 bp | CATCTGGAGGGCTGGGGTTGTGCGTGCACGTGGGTGCGCGCCTCCATGCCTGTGGGGCTTGGTGCAGGCTaGCCCACTGCTCAGGAGACT | + |
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Preference number: 2 (lower is better) Translates to: HLEGWGCACTWVRASMPVGLGAG*PTAQET Trigger: AGTCTCCTGAGCAGTGGGGCAGCCTGCACCAAGCCC...CACAGGCATGGAGGCGCGCACCCACGTGCACGCACAACCCCAGCCCTCCAGATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR GCA 90 bp | TGGGGTTGTGCGTGCACGTGGGTGCGCGCCTCCATGCCTGTGAAACCACTGCTCTTTATGGGGGCTTGGTaGAGGCTGCCCCACTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: WGCACTWVRASMPVKPLLFMGAW*RLPHCS Trigger: TGAGCAGTGGGGCAGCCTGCACCAAGCCCCCATAAA...GAGCAGTGGTTTCACAGGCATGGAGGCGCGCACCCACGTGCACGCACAACCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR TCA 90 bp | CATCTGGAGGGCTGGGGTTGTGCGTGCACGTGGGTGCGCGCCTCCATGCCTGTGTCCACTCCAGCTGAATaGCAGGAAATTCATGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: HLEGWGCACTWVRASMPVSTPAE*QEIHAR Trigger: CCTTGCATGAATTTCCTGTCATTCAGCTGGAGTGGA...CACAGGCATGGAGGCGCGCACCCACGTGCACGCACAACCCCAGCCCTCCAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR GCA 90 bp | CTGTCCTCACAGACGCTCTGGAAGATGTGGCATTCCCCCAAAATCCTGCACTGCTCTGCAGGGGGACCCTaGCTTCCAAGCCAGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LSSQTLWKMWHSPKILHCSAGGP*LPSQPG Trigger: CCCAGGCTGGCTTGGAAGGCAGGGTCCCCCTGCAGA...GCAGTGCAGGATTTTGGGGGAATGCCACATCTTCCAGAGCGTCTGTGAGGACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR CAA 90 bp | GTCCATGTCATAGGAGGCTGTGGTCCCCCAGGGTATGGTCACATCTaGCCACCTGAGGGCACAGCTCTTCTGAGCTGCAGTGGCAACAGC | + |
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Preference number: 2 (lower is better) Translates to: VHVIGGCGPPGYGHI*PPEGTALLSCSGNS Trigger: GCTGTTGCCACTGCAGCTCAGAAGAGCTGTGCCCTCAGGTGGCAAGATGTGACCATACCCTGGGGGACCACAGCCTCCTATGACATGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR GCA 90 bp | CATCTGGAGGGCTGGGGTTGTGCGTGCACGTGGGTGCGCGCCTCCATGCCTGTGCTGGGTCTCAGGACTTaGATTACAATAGGCACTCTA | + |
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Preference number: 2 (lower is better) Translates to: HLEGWGCACTWVRASMPVLGLRT*ITIGTL Trigger: TAGAGTGCCTATTGTAATGCAAGTCCTGAGACCCAG...CACAGGCATGGAGGCGCGCACCCACGTGCACGCACAACCCCAGCCCTCCAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR TCA 90 bp | GTCCAGCCACAGCAGGTGGGGACCCAATATTTGGGTGGCAAGTTATGGCTCCACTCTCCAGACCTTCCCTaGGGGAGCAACAGCTACAAG | + |
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Preference number: 2 (lower is better) Translates to: VQPQQVGTQYLGGKLWLHSPDLP*GSNSYK Trigger: CTTGTAGCTGTTGCTCCCTCAGGGAAGGTCTGGAGA...GTGGAGCCATAACTTGCCACCCAAATATTGGGTCCCCACCTGCTGTGGCTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR CCA 90 bp | TTTAGTGACCACTGCCCCTGTCAGTTCAGGGAGCACAAGGGCAGACGCTGCCCTAGGTTCTGGCTTGGATaGGGGAAGTACAGGCAGATG | + |
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Preference number: 2 (lower is better) Translates to: FSDHCPCQFREHKGRRCPRFWLG*GKYRQM Trigger: CATCTGCCTGTACTTCCCCCATCCAAGCCAGAACCT...AGGGCAGCGTCTGCCCTTGTGCTCCCTGAACTGACAGGGGCAGTGGTCACTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR CCA 90 bp | TCCAAAGGACATCAGGCTTGGGGTCCTTTAGGGTTCCAGTCTGGGGCTAGTCTGGTCACCACACAGTCCTaGGTGCCGGCTCTATTCCAC | + |
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Preference number: 2 (lower is better) Translates to: SKGHQAWGPLGFQSGASLVTTQS*VPALFH Trigger: GTGGAATAGAGCCGGCACCCAGGACTGTGTGGTGAC...CAGACTAGCCCCAGACTGGAACCCTAAAGGACCCCAAGCCTGATGTCCTTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR CCA 90 bp | CGCGCCTCCATGCCTGTGAAACCACTGCTCTCGAGATCACAGAATTCCCTAGTGGGCTGTCTAGGCACCTaGCCAGGGATCCAAAGGACA | + |
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Preference number: 2 (lower is better) Translates to: RASMPVKPLLSRSQNSLVGCLGT*PGIQRT Trigger: TGTCCTTTGGATCCCTGGCCAGGTGCCTAGACAGCC...CACTAGGGAATTCTGTGATCTCGAGAGCAGTGGTTTCACAGGCATGGAGGCGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR CAA 90 bp | TTGGTTGGGTCCTGGGGACCCATGGCTGGTAGAGTGCATACCTTCTaGTCTCTCTCCAGACCTTCCCTGAGGGAGCAACAGCTACAAGGA | + |
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Preference number: 2 (lower is better) Translates to: LVGSWGPMAGRVHTF*SLSRPSLREQQLQG Trigger: TCCTTGTAGCTGTTGCTCCCTCAGGGAAGGTCTGGAGAGAGACAAGAAGGTATGCACTCTACCAGCCATGGGTCCCCAGGACCCAACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR GCA 90 bp | TGGGGTTGTGCGTGCACGTGGGTGCGCGCCTCCATGCCTGTGAAACCACTGCTCATGACAGGAAATTCATaGAAGGCCTTTTTGGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: WGCACTWVRASMPVKPLLMTGNS*KAFLGS Trigger: ACTCCCCAAAAAGGCCTTGCATGAATTTCCTGTCAT...GAGCAGTGGTTTCACAGGCATGGAGGCGCGCACCCACGTGCACGCACAACCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR CCA 90 bp | GACCGTGCATCACATCCCTCTCATGTGCTCGACTTCCTATGGACTCATTTAGTGCCAGAGGCCTTTGGTTaGGTCCTGGGGACCCATGGC | + |
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Preference number: 2 (lower is better) Translates to: DRASHPSHVLDFLWTHLVPEAFG*VLGTHG Trigger: GCCATGGGTCCCCAGGACCCAACCAAAGGCCTCTGG...CACTAAATGAGTCCATAGGAAGTCGAGCACATGAGAGGGATGTGATGCACGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCTCACAGACGCTCTGGAAGATGTGGCATTCCCCCAAAATCCTGCACTGCTCCAGCCACAGCAGGTaGGGACCCAATATTTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: LSSQTLWKMWHSPKILHCSSHSR*GPNIWV Trigger: CACCCAAATATTGGGTCCCCACCTGCTGTGGCTGGA...GCAGTGCAGGATTTTGGGGGAATGCCACATCTTCCAGAGCGTCTGTGAGGACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR CCA 90 bp | CTTCAAAACCCAGGATCAAATGTCCTGCTGAAAACCACGGCCACCCAGACCGTGCCTTCCAAGCCAGCCTaGGCTAGTGAGGTTCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: LQNPGSNVLLKTTATQTVPSKPA*ASEVLA Trigger: AGCCAGAACCTCACTAGCCCAGGCTGGCTTGGAAGG...CACGGTCTGGGTGGCCGTGGTTTTCAGCAGGACATTTGATCCTGGGTTTTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR CCA 90 bp | TTTAGTGACCACTGCCCCTGTCAGTTCAGGGAGCACAAGGGCAGACGCTGCCCTCACTGCTCAGGAGACTaGGGACTTAGATCTTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: FSDHCPCQFREHKGRRCPHCSGD*GLRSCL Trigger: CAAGCAAGATCTAAGTCCCCAGTCTCCTGAGCAGTG...AGGGCAGCGTCTGCCCTTGTGCTCCCTGAACTGACAGGGGCAGTGGTCACTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR CCA 90 bp | GGCCTGTCAGGATTCACTATCACTCCTAACAGAAGGGCCAAGTGGGACCTTCCATCCACTTCCCTCCCATaGGGAATGGGGCTGTACTGG | + |
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Preference number: 2 (lower is better) Translates to: GLSGFTITPNRRAKWDLPSTSLP*GMGLYW Trigger: CCAGTACAGCCCCATTCCCCATGGGAGGGAAGTGGA...TGGAAGGTCCCACTTGGCCCTTCTGTTAGGAGTGATAGTGAATCCTGACAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGTCAGGATTCACTATCACTCCTAACAGAAGGGCCAAGTGGGACCTTCCATCACATCTTGCCACCTaGGGGCACAGCTCTTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: GLSGFTITPNRRAKWDLPSHLAT*GHSSSE Trigger: CTCAGAAGAGCTGTGCCCTCAGGTGGCAAGATGTGA...TGGAAGGTCCCACTTGGCCCTTCTGTTAGGAGTGATAGTGAATCCTGACAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR GCA 90 bp | CTTCAAAACCCAGGATCAAATGTCCTGCTGAAAACCACGGCCACCCAGACCGTGATTCCCCCAAAATCCTaGACTGCAGCTGCCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LQNPGSNVLLKTTATQTVIPPKS*TAAACR Trigger: CCTGCAGGCAGCTGCAGTGCAGGATTTTGGGGGAAT...CACGGTCTGGGTGGCCGTGGTTTTCAGCAGGACATTTGATCCTGGGTTTTGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR CCA 90 bp | GCAGGCTGCCCCACTGCTCAGGAGACTGGGGACTTAGATCTTGCTTGGCATTCAGACCCAATATTTGGGTaGCAAGTTATGGCTCCACCC | + |
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Preference number: 2 (lower is better) Translates to: AGCPTAQETGDLDLAWHSDPIFG*QVMAPP Trigger: GGGTGGAGCCATAACTTGCCACCCAAATATTGGGTC...TGAATGCCAAGCAAGATCTAAGTCCCCAGTCTCCTGAGCAGTGGGGCAGCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR CCA 90 bp | ATTCTGAGGTCTGTCCTCACAGACGCTCTGGAAGATGTGGCATTCCCCCAAAATATTGGCCCTCATGAATaGGGACTCTGCAGTCGGCCC | + |
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Preference number: 2 (lower is better) Translates to: ILRSVLTDALEDVAFPQNIGPHE*GLCSRP Trigger: GGGCCGACTGCAGAGTCCCCATTCATGAGGGCCAAT...ATTTTGGGGGAATGCCACATCTTCCAGAGCGTCTGTGAGGACAGACCTCAGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR TCA 90 bp | GACCGTGCATCACATCCCTCTCATGTGCTCGACTTCCTATGGACTCATTTAGTGACAGCTGTGAAGGACTaGTTGCTGCCTGATTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: DRASHPSHVLDFLWTHLVTAVKD*LLPDWP Trigger: GGGCCAATCAGGCAGCAATCAGTCCTTCACAGCTGT...CACTAAATGAGTCCATAGGAAGTCGAGCACATGAGAGGGATGTGATGCACGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR TCA 90 bp | ATTCTGAGGTCTGTCCTCACAGACGCTCTGGAAGATGTGGCATTCCCCCAAAATCCCCAGGACACGATGTaGACACTGAGCTTTGGACAG | + |
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Preference number: 2 (lower is better) Translates to: ILRSVLTDALEDVAFPQNPQDTM*TLSFGQ Trigger: CTGTCCAAAGCTCAGTGTTCACATCGTGTCCTGGGG...ATTTTGGGGGAATGCCACATCTTCCAGAGCGTCTGTGAGGACAGACCTCAGAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR GCA 90 bp | GACCGTGCATCACATCCCTCTCATGTGCTCGACTTCCTATGGACTCATTTAGTGAGCAGGGCTGTCAGTTaGAGGCAGCTTTCTGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: DRASHPSHVLDFLWTHLVSRAVS*RQLSGR Trigger: CCTTCCAGAAAGCTGCCTGCAACTGACAGCCCTGCT...CACTAAATGAGTCCATAGGAAGTCGAGCACATGAGAGGGATGTGATGCACGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR CCA 90 bp | GACCGTGCATCACATCCCTCTCATGTGCTCGACTTCCTATGGACTCATTTAGTGTCCTCACAGACGCTCTaGAAGATGTGGCATTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: DRASHPSHVLDFLWTHLVSSQTL*KMWHSP Trigger: GGGGGAATGCCACATCTTCCAGAGCGTCTGTGAGGA...CACTAAATGAGTCCATAGGAAGTCGAGCACATGAGAGGGATGTGATGCACGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR TCA 90 bp | ATTCTGAGGTCTGTCCTCACAGACGCTCTGGAAGATGTGGCATTCCCCCAAAATAGCTTTGGACAGCTGTaGAGGACTGATTGCTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: ILRSVLTDALEDVAFPQNSFGQL*RTDCCL Trigger: CAGGCAGCAATCAGTCCTTCACAGCTGTCCAAAGCT...ATTTTGGGGGAATGCCACATCTTCCAGAGCGTCTGTGAGGACAGACCTCAGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR GCA 90 bp | CACCCTTCAAAACCCAGGATCAAATGTCCTGCTGAAAACCACGGCCACCCAGACCCATGGCTGGTAGAGTaGATACCTTCTTGTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: HPSKPRIKCPAENHGHPDPWLVE*IPSCLS Trigger: AGAGAGACAAGAAGGTATGCACTCTACCAGCCATGG...GTCTGGGTGGCCGTGGTTTTCAGCAGGACATTTGATCCTGGGTTTTGAAGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR CCA 90 bp | ATTCTGAGGTCTGTCCTCACAGACGCTCTGGAAGATGTGGCATTCCCCCAAAATAGTGAGGTTCTGGCTTaGATGGGGGAAGTACAGGCA | + |
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Preference number: 2 (lower is better) Translates to: ILRSVLTDALEDVAFPQNSEVLA*MGEVQA Trigger: TGCCTGTACTTCCCCCATCCAAGCCAGAACCTCACT...ATTTTGGGGGAATGCCACATCTTCCAGAGCGTCTGTGAGGACAGACCTCAGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCTCACAGACGCTCTGGAAGATGTGGCATTCCCCCAAAATCCTGCACTGCTTTAATGAGATGGCTTaGCTCAAGATGGCAGGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: LSSQTLWKMWHSPKILHCFNEMA*LKMAGC Trigger: ACAGCCTGCCATCTTGAGCCAAGCCATCTCATTAAA...GCAGTGCAGGATTTTGGGGGAATGCCACATCTTCCAGAGCGTCTGTGAGGACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CAA 90 bp | AACCACTTCAGAGATCCTCAGGGTGCTCTTCCTGAAGCTGAGATGTaGCCAGCCTTAGCTCCCCTTCCTCTGACATCTCCTTTTTGTCTA | + |
|
Preference number: 2 (lower is better) Translates to: NHFRDPQGALPEAEM*PALAPLPLTSPFCL Trigger: TAGACAAAAAGGAGATGTCAGAGGAAGGGGAGCTAAGGCTGGCAACATCTCAGCTTCAGGAAGAGCACCCTGAGGATCTCTGAAGTGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR-3UTR TCA 90 bp | TATAATGAACACCCAGTCTCAAGAGACCTCCAGAGGCCTTTGGTTGGGTCCTGGACACGATGTGAACACTaGGCTTTGGACAGCTGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: YNEHPVSRDLQRPLVGSWTRCEH*ALDSCE Trigger: TTCACAGCTGTCCAAAGCTCAGTGTTCACATCGTGT...CCAGGACCCAACCAAAGGCCTCTGGAGGTCTCTTGAGACTGGGTGTTCATTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR-3UTR CCA 90 bp | GTCTATACTGTCACCTGGCACTCTTTCAGTAGGTCACCACACAGTCCTGGGTGCGGTTCTGTTGGTATTTaGGTATTTGAGGTAGCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: VYTVTWHSFSRSPHSPGCGSVGI*VFEVAP Trigger: TGGGGCTACCTCAAATACCCAAATACCAACAGAACC...GCACCCAGGACTGTGTGGTGACCTACTGAAAGAGTGCCAGGTGACAGTATAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR-3UTR TCA 90 bp | GACCGTGCATCACATCCCTCTCATGTGCTCGACTTCCTATGGACTCATTTAGTGACCTTCCACTCCAGCTaGATGACAGGAAATTCATGC | + |
|
Preference number: 2 (lower is better) Translates to: DRASHPSHVLDFLWTHLVTFHSS*MTGNSC Trigger: GCATGAATTTCCTGTCATTCAGCTGGAGTGGAAGGT...CACTAAATGAGTCCATAGGAAGTCGAGCACATGAGAGGGATGTGATGCACGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR-3UTR CCA 90 bp | TCCAAAGGACATCAGGCTTGGGGTCCTTTAGGGTTCCAGTCTGGGGCTAGTCTGAAATCACAGATCTTCTaGATTGTTAAGCAGGGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SKGHQAWGPLGFQSGASLKSQIF*IVKQGC Trigger: ACAGCCCTGCTTAACAATCCAGAAGATCTGTGATTT...CAGACTAGCCCCAGACTGGAACCCTAAAGGACCCCAAGCCTGATGTCCTTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTCAGGACTTGCATTACAATAGGCACTCTATAATTGTTCTGGAACCTTCTACAGGTCCTGGGGACCCATaGCTGGTAGAGTGCATACCT | + |
|
Preference number: 2 (lower is better) Translates to: SQDLHYNRHSIIVLEPSTGPGDP*LVECIP Trigger: AGGTATGCACTCTACCAGCCATGGGTCCCCAGGACC...TGTAGAAGGTTCCAGAACAATTATAGAGTGCCTATTGTAATGCAAGTCCTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTCTGAGGTCTGTCCTCACAGACGCTCTGGAAGATGTGGCATTCCCCCAAAATTGGTTTTTAATGAGATaGCTTGGCTCAAGATGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: ILRSVLTDALEDVAFPQNWFLMR*LGSRWQ Trigger: CTGCCATCTTGAGCCAAGCCATCTCATTAAAAACCA...ATTTTGGGGGAATGCCACATCTTCCAGAGCGTCTGTGAGGACAGACCTCAGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAGACAGGGTTTTATTATATAGCCCTGACTAGTCTGAACTCCTTATTTAGAATCGGTCTCTGCATCTaGAGGGCTGGGGTTGTGCGT | + |
|
Preference number: 2 (lower is better) Translates to: SETGFYYIALTSLNSLFRIGLCI*RAGVVR Trigger: ACGCACAACCCCAGCCCTCCAGATGCAGAGACCGAT...TCTAAATAAGGAGTTCAGACTAGTCAGGGCTATATAATAAAACCCTGTCTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAGACAGGGTTTTATTATATAGCCCTGACTAGTCTGAACTCCTTATTTAGAGGAAGTACAGGCAGATaGTCTCTCAGTCCAGCCACA | + |
|
Preference number: 2 (lower is better) Translates to: SETGFYYIALTSLNSLFRGSTGR*SLSPAT Trigger: TGTGGCTGGACTGAGAGACCATCTGCCTGTACTTCC...TCTAAATAAGGAGTTCAGACTAGTCAGGGCTATATAATAAAACCCTGTCTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAGACAGGGTTTTATTATATAGCCCTGACTAGTCTGAACTCCTTATTTAGAGACTGCACTTTGAGCTaGTTTTTAATGAGATGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: SETGFYYIALTSLNSLFRDCTLS*FLMRWL Trigger: AAGCCATCTCATTAAAAACCAGCTCAAAGTGCAGTC...TCTAAATAAGGAGTTCAGACTAGTCAGGGCTATATAATAAAACCCTGTCTCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR GCA 72 bp | CATCGGTCTCTGCATCTGGAGGGCTGGGGTTGTGCGTaGACGTGGGTGCGCGCCTCCATGCCTGTGAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: HRSLHLEGWGCA*TWVRASMPVKP Trigger: TGGTTTCACAGGCATGGAGGCGCGCACCCACGTGCACGCACAACCCCAGCCCTCCAGATGCAGAGACCGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CCA 72 bp | TCTCTGCATCTGGAGGGCTGGGGTTGTGCGTGCACGTaGGTGCGCGCCTCCATGCCTGTGAAACCACTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SLHLEGWGCACT*VRASMPVKPLL Trigger: GAGCAGTGGTTTCACAGGCATGGAGGCGCGCACCCACGTGCACGCACAACCCCAGCCCTCCAGATGCAGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CCA 72 bp | TTTAGAGAGAGCCATCGGTCTCTGCATCTGGAGGGCTaGGGTTGTGCGTGCACGTGGGTGCGCGCCTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: FRESHRSLHLEG*GCACTWVRASM Trigger: CATGGAGGCGCGCACCCACGTGCACGCACAACCCCAGCCCTCCAGATGCAGAGACCGATGGCTCTCTCTAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CCA 72 bp | CAGATCTGCAGGGGGACCCTGCCTTCCAAGCCAGCCTaGGCTAGTGAGGTTCTGGCTTGGATGGGGGAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: QICRGTLPSKPA*ASEVLAWMGEV Trigger: TACTTCCCCCATCCAAGCCAGAACCTCACTAGCCCAGGCTGGCTTGGAAGGCAGGGTCCCCCTGCAGATCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CCA 72 bp | GGGGCTTGGTGCAGGCTGCCCCACTGCTCAGGAGACTaGGGACTTAGATCTTGCTTGGCATTCACCCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: GAWCRLPHCSGD*GLRSCLAFTQP Trigger: AGGCTGGGTGAATGCCAAGCAAGATCTAAGTCCCCAGTCTCCTGAGCAGTGGGGCAGCCTGCACCAAGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR TCA 72 bp | CTGTGGTCCCCCAGGGTATGGTCACATCTTGCCACCTaGGGGCACAGCTCTTCTGAGCTGCAGTGGCAACAG | + |
|
Preference number: 3 (lower is better) Translates to: LWSPRVWSHLAT*GHSSSELQWQQ Trigger: CTGTTGCCACTGCAGCTCAGAAGAGCTGTGCCCTCAGGTGGCAAGATGTGACCATACCCTGGGGGACCACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CCA 72 bp | TGGACCACACAGCGTCCACTTCCCTCCCATGGGGAATaGGGCTGTACTGGTCTACACTGCCCCACTCCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: WTTQRPLPSHGE*GCTGLHCPTPV Trigger: AACAGGAGTGGGGCAGTGTAGACCAGTACAGCCCCATTCCCCATGGGAGGGAAGTGGACGCTGTGTGGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CCA 72 bp | ATGGCTTGGCTCAAGATGGCAGGCTGTCTAGGCACCTaGCCAGGGATCCAAAGGACATCAGGCTTGGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: MAWLKMAGCLGT*PGIQRTSGLGS Trigger: GGACCCCAAGCCTGATGTCCTTTGGATCCCTGGCCAGGTGCCTAGACAGCCTGCCATCTTGAGCCAAGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CCA 72 bp | CTTAACTCTTTAGAGAGAGCCATCGGTCTCTGCATCTaGAGGGCTGGGGTTGTGCGTGCACGTGGGTGCGCG | + |
|
Preference number: 3 (lower is better) Translates to: LNSLERAIGLCI*RAGVVRARGCA Trigger: CGCGCACCCACGTGCACGCACAACCCCAGCCCTCCAGATGCAGAGACCGATGGCTCTCTCTAAAGAGTTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR-3UTR CAA 90 bp | CGCGCCTCCATGCCTGTGAAACCACTGCTCTCGAGATCACAGAATTCCCTAGTGTCCAGAGGCCTTTGGTaGGGTCCTGGGGACCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: RASMPVKPLLSRSQNSLVSRGLW*GPGDPW Trigger: CCATGGGTCCCCAGGACCCAACCAAAGGCCTCTGGA...CACTAGGGAATTCTGTGATCTCGAGAGCAGTGGTTTCACAGGCATGGAGGCGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGTTGTGCGTGCACGTGGGTGCGCGCCTCCATGCCTGTGAAACCACTGCTCGGACTTAGATCTTGCTaGGCATTCACCCAGCCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: WGCACTWVRASMPVKPLLGLRSC*AFTQPS Trigger: ACTAGGCTGGGTGAATGCCAAGCAAGATCTAAGTCC...GAGCAGTGGTTTCACAGGCATGGAGGCGCGCACCCACGTGCACGCACAACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCTATACTGTCACCTGGCACTCTTTCAGTAGGTCACCACACAGTCCTGGGTGCCCCCGTGGCAAGTGTTaGTGTGGCAGTGGCCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VYTVTWHSFSRSPHSPGCPRGKC*CGSGPA Trigger: TGCTGGGCCACTGCCACACAAACACTTGCCACGGGG...GCACCCAGGACTGTGTGGTGACCTACTGAAAGAGTGCCAGGTGACAGTATAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTTAGAGAGAGCCATCGGTCTCTGCATCTGGAGGGCTGGGGTTGTGCGTGCCCTGAAGCTGAGATGTaGCCAGCCTTAGCTCCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LFRESHRSLHLEGWGCACPEAEM*PALAPL Trigger: AAGGGGAGCTAAGGCTGGCAACATCTCAGCTTCAGG...GCACGCACAACCCCAGCCCTCCAGATGCAGAGACCGATGGCTCTCTCTAAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR GCA 72 bp | GTTGCCCGAGGAAGTTTATGGGGGCTTGGTGCAGGCTaGCCCACTGCTCAGGAGACTGGGGACTTAGATCTT | + |
|
Preference number: 3 (lower is better) Translates to: VARGSLWGLGAG*PTAQETGDLDL Trigger: AAGATCTAAGTCCCCAGTCTCCTGAGCAGTGGGGCAGCCTGCACCAAGCCCCCATAAACTTCCTCGGGCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR GCA 72 bp | CTGACCCTTAACTCTTTAGAGAGAGCCATCGGTCTCTaGATCTGGAGGGCTGGGGTTGTGCGTGCACGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LTLNSLERAIGL*IWRAGVVRARG Trigger: CCCACGTGCACGCACAACCCCAGCCCTCCAGATGCAGAGACCGATGGCTCTCTCTAAAGAGTTAAGGGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CCA 72 bp | ATGAACACCCAGTCTCAAGAGACCTCCAGAGGCCTTTaGTTGGGTCCTGGGGACCCATGGCTGGTAGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: MNTQSQETSRGL*LGPGDPWLVEC Trigger: GCACTCTACCAGCCATGGGTCCCCAGGACCCAACCAAAGGCCTCTGGAGGTCTCTTGAGACTGGGTGTTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CCA 72 bp | ACCTCCAGAGGCCTTTGGTTGGGTCCTGGGGACCCATaGCTGGTAGAGTGCATACCTTCTTGTCTCTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: TSRGLWLGPGDP*LVECIPSCLSP Trigger: TGGAGAGAGACAAGAAGGTATGCACTCTACCAGCCATGGGTCCCCAGGACCCAACCAAAGGCCTCTGGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CCA 72 bp | GTCTCAAGAGACCTCCAGAGGCCTTTGGTTGGGTCCTaGGGACCCATGGCTGGTAGAGTGCATACCTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: VSRDLQRPLVGS*GPMAGRVHTFL Trigger: CAAGAAGGTATGCACTCTACCAGCCATGGGTCCCCAGGACCCAACCAAAGGCCTCTGGAGGTCTCTTGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CCA 72 bp | CAGCAGGTGGGGACCCAATATTTGGGTGGCAAGTTATaGCTCCACCCAACATCTGCCACTGTCCCTAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QQVGTQYLGGKL*LHPTSATVPSQ Trigger: CTGGCTAGGGACAGTGGCAGATGTTGGGTGGAGCCATAACTTGCCACCCAAATATTGGGTCCCCACCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCCTCACAGACGCTCTGGAAGATGTGGCATTCCCCCAAAATCCTGCACTGCAAGCAGGGCTGTCAGTaGCAGGCAGCTTTCTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LSSQTLWKMWHSPKILHCKQGCQ*QAAFWK Trigger: CTTCCAGAAAGCTGCCTGCAACTGACAGCCCTGCTT...GCAGTGCAGGATTTTGGGGGAATGCCACATCTTCCAGAGCGTCTGTGAGGACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR GCA 72 bp | CTCTGGAAGATGTGGCATTCCCCCAAAATCCTGCACTaGAGCTGCCTGCAGGGAACACTCAGCCCTGATGAA | + |
|
Preference number: 3 (lower is better) Translates to: LWKMWHSPKILH*SCLQGTLSPDE Trigger: TTCATCAGGGCTGAGTGTTCCCTGCAGGCAGCTGCAGTGCAGGATTTTGGGGGAATGCCACATCTTCCAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR GCA 72 bp | TGTGCTCGACTTCCTATGGACTCATTTAGTGACCACTaGCCCTGTCAGTTCAGGGAGCACAAGGGCAGACGC | + |
|
Preference number: 3 (lower is better) Translates to: CARLPMDSFSDH*PCQFREHKGRR Trigger: GCGTCTGCCCTTGTGCTCCCTGAACTGACAGGGGCAGTGGTCACTAAATGAGTCCATAGGAAGTCGAGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CCA 72 bp | AGTCCAGCCACAGCAGGTGGGGACCCAATATTTGGGTaGCAAGTTATGGCTCCACCCAACATCTGCCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: SPATAGGDPIFG*QVMAPPNICHC Trigger: ACAGTGGCAGATGTTGGGTGGAGCCATAACTTGCCACCCAAATATTGGGTCCCCACCTGCTGTGGCTGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CCA 72 bp | TCTCAGTCCAGCCACAGCAGGTGGGGACCCAATATTTaGGTGGCAAGTTATGGCTCCACCCAACATCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SQSSHSRWGPNI*VASYGSTQHLP Trigger: TGGCAGATGTTGGGTGGAGCCATAACTTGCCACCCAAATATTGGGTCCCCACCTGCTGTGGCTGGACTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CCA 72 bp | TACAGGCAGATGGTCTCTCAGTCCAGCCACAGCAGGTaGGGACCCAATATTTGGGTGGCAAGTTATGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: YRQMVSQSSHSR*GPNIWVASYGS Trigger: GGAGCCATAACTTGCCACCCAAATATTGGGTCCCCACCTGCTGTGGCTGGACTGAGAGACCATCTGCCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR-3UTR CAA 90 bp | CGCGCCTCCATGCCTGTGAAACCACTGCTCTCGAGATCACAGAATTCCCTAGTGTCATGCAAGGCCTTTTaGGGGAGTGGGAAAGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: RASMPVKPLLSRSQNSLVSCKAF*GSGKAH Trigger: ATGTGCTTTCCCACTCCCCAAAAAGGCCTTGCATGA...CACTAGGGAATTCTGTGATCTCGAGAGCAGTGGTTTCACAGGCATGGAGGCGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR TCA 72 bp | TCTTCACCCTTCAAAACCCAGGATCAAATGTCCTGCTaGAAACCACGGCCACCCAGACCGTGCATCACATCC | + |
|
Preference number: 3 (lower is better) Translates to: SSPFKTQDQMSC*KPRPPRPCITS Trigger: GGATGTGATGCACGGTCTGGGTGGCCGTGGTTTTCAGCAGGACATTTGATCCTGGGTTTTGAAGGGTGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR GCA 72 bp | CTGCCCCACTGCTCAGGAGACTGGGGACTTAGATCTTaGTTGGCATTCACCCAGCCTAGTATTTACAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LPHCSGDWGLRS*LAFTQPSIYKG Trigger: GCCTTTGTAAATACTAGGCTGGGTGAATGCCAAGCAAGATCTAAGTCCCCAGTCTCCTGAGCAGTGGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR GCA 72 bp | TGTGGCATTCCCCCAAAATCCTGCACTGCAGCTGCCTaGAGGGAACACTCAGCCCTGATGAATGAATCTACA | + |
|
Preference number: 3 (lower is better) Translates to: CGIPPKSCTAAA*REHSALMNEST Trigger: TGTAGATTCATTCATCAGGGCTGAGTGTTCCCTGCAGGCAGCTGCAGTGCAGGATTTTGGGGGAATGCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTTAGAGAGAGCCATCGGTCTCTGCATCTGGAGGGCTGGGGTTGTGCGTGCTTCTGGAAGGTTCTGTaGGTATTTGGGTATTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LFRESHRSLHLEGWGCACFWKVL*VFGYLR Trigger: CCTCAAATACCCAAATACCAACAGAACCTTCCAGAA...GCACGCACAACCCCAGCCCTCCAGATGCAGAGACCGATGGCTCTCTCTAAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR-3UTR CAA 90 bp | TATAATGAACACCCAGTCTCAAGAGACCTCCAGAGGCCTTTGGTTGGGTCCTGGAGAGTGCATACCTTCTaGTCTCTCTCCAGACCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: YNEHPVSRDLQRPLVGSWRVHTF*SLSRPS Trigger: GGAAGGTCTGGAGAGAGACAAGAAGGTATGCACTCT...CCAGGACCCAACCAAAGGCCTCTGGAGGTCTCTTGAGACTGGGTGTTCATTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR TCA 72 bp | ATGGTCACATCTTGCCACCTGAGGGCACAGCTCTTCTaGGCTGCAGTGGCAACAGCTCTGATAAATCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: MVTSCHLRAQLF*AAVATALINHR Trigger: TCTGTGATTTATCAGAGCTGTTGCCACTGCAGCTCAGAAGAGCTGTGCCCTCAGGTGGCAAGATGTGACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR TCA 72 bp | CTAACAGAAGGGCCAAGTGGGACCTTCCACTCCAGCTaGATGACAGGAAATTCATGCAAGGCCTTTTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LTEGPSGTFHSS*MTGNSCKAFLG Trigger: CCCCAAAAAGGCCTTGCATGAATTTCCTGTCATTCAGCTGGAGTGGAAGGTCCCACTTGGCCCTTCTGTTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CCA 72 bp | CGTGCATCACATCCCTCTCATGTGCTCGACTTCCTATaGACTCATTTAGTGACCACTGCCCCTGTCAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: RASHPSHVLDFL*THLVTTAPVSS Trigger: TGAACTGACAGGGGCAGTGGTCACTAAATGAGTCCATAGGAAGTCGAGCACATGAGAGGGATGTGATGCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CCA 72 bp | CCCACTGCTCAGGAGACTGGGGACTTAGATCTTGCTTaGCATTCACCCAGCCTAGTATTTACAAAGGCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PTAQETGDLDLA*HSPSLVFTKAE Trigger: TTCAGCCTTTGTAAATACTAGGCTGGGTGAATGCCAAGCAAGATCTAAGTCCCCAGTCTCCTGAGCAGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR GCA 72 bp | CACAGATCTTCTGGATTGTTAAGCAGGGCTGTCAGTTaGAGGCAGCTTTCTGGAAGGTTCTGTTGGTATTTG | + |
|
Preference number: 3 (lower is better) Translates to: HRSSGLLSRAVS*RQLSGRFCWYL Trigger: CAAATACCAACAGAACCTTCCAGAAAGCTGCCTGCAACTGACAGCCCTGCTTAACAATCCAGAAGATCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTGAGACAGGGTTTTATTATATAGCCCTGACTAGTCTGAACTCCTTATTTAGAACTGCCCCACTCCTGTaGCCCGAGGAAGTTTATGGG | + |
|
Preference number: 3 (lower is better) Translates to: SETGFYYIALTSLNSLFRTAPLL*PEEVYG Trigger: CCCATAAACTTCCTCGGGCAACAGGAGTGGGGCAGT...TCTAAATAAGGAGTTCAGACTAGTCAGGGCTATATAATAAAACCCTGTCTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR TCA 72 bp | TCCACCCAACATCTGCCACTGTCCCTAGCCAGAATCTaGGACATAATTAGGAGTATAATGAACACCCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: STQHLPLSLARI*DIIRSIMNTQS Trigger: AGACTGGGTGTTCATTATACTCCTAATTATGTCTCAGATTCTGGCTAGGGACAGTGGCAGATGTTGGGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR TCA 72 bp | GCTAGGAACCAAATCGAGTTCTTTACAAAAGCAGTCTaGACCAACCATGGAGAAATCTTTCTGCTTTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ARNQIEFFTKAV*TNHGEIFLLSR Trigger: TCTGGAAAGCAGAAAGATTTCTCCATGGTTGGTTCAGACTGCTTTTGTAAAGAACTCGATTTGGTTCCTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTCAGGACTTGCATTACAATAGGCACTCTATAATTGTTCTGGAACCTTCTACATCTGACATCTCCTTTTaGTCTATACTGTCACCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: SQDLHYNRHSIIVLEPSTSDISF*SILSPG Trigger: GCCAGGTGACAGTATAGACAAAAAGGAGATGTCAGA...TGTAGAAGGTTCCAGAACAATTATAGAGTGCCTATTGTAATGCAAGTCCTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR CCA 90 bp | CATCTGGAGGGCTGGGGTTGTGCGTGCACGTGGGTGCGCGCCTCCATGCCTGTGAGGTGCTTGTTGAAGTaGGGCAGGGGCAGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HLEGWGCACTWVRASMPVRCLLK*GRGRLG Trigger: GCCCAGCCTGCCCCTGCCCCACTTCAACAAGCACCT...CACAGGCATGGAGGCGCGCACCCACGTGCACGCACAACCCCAGCCCTCCAGATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR GCA 90 bp | CATCTGGAGGGCTGGGGTTGTGCGTGCACGTGGGTGCGCGCCTCCATGCCTGTGTCAGCCCCCAGCAGGTaGTTGTTGAAGTGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLEGWGCACTWVRASMPVSAPSR*LLKWGR Trigger: CCTGCCCCACTTCAACAAGCACCTGCTGGGGGCTGA...CACAGGCATGGAGGCGCGCACCCACGTGCACGCACAACCCCAGCCCTCCAGATG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGTTGTGCGTGCACGTGGGTGCGCGCCTCCATGCCTGTGAAACCACTGCTCCGCAGTGCAGGTCTGTaGTTGGGAGCGTGTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WGCACTWVRASMPVKPLLRSAGL*LGACAG Trigger: CCCAGCACACGCTCCCAATCACAGACCTGCACTGCG...GAGCAGTGGTTTCACAGGCATGGAGGCGCGCACCCACGTGCACGCACAACCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR GCA 90 bp | TGGGGTTGTGCGTGCACGTGGGTGCGCGCCTCCATGCCTGTGAAACCACTGCTCCCACAGAATATGTGGTaGTCGGCCAGGTCCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WGCACTWVRASMPVKPLLPQNMW*SARSMV Trigger: GACCATGGACCTGGCCGAGCACCACATATTCTGTGG...GAGCAGTGGTTTCACAGGCATGGAGGCGCGCACCCACGTGCACGCACAACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR CCA 90 bp | GTCTATACTGTCACCTGGCACTCTTTCAGTAGGTCACCACACAGTCCTGGGTGCTGGCCACCCGGGCCATaGGGCCTCCGAAGCCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VYTVTWHSFSRSPHSPGCWPPGP*GLRSRS Trigger: ACTGCGGCTTCGGAGGCCCCATGGCCCGGGTGGCCA...GCACCCAGGACTGTGTGGTGACCTACTGAAAGAGTGCCAGGTGACAGTATAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR CCA 90 bp | CTCTTTAGAGAGAGCCATCGGTCTCTGCATCTGGAGGGCTGGGGTTGTGCGTGCTCTTTGCCCTGCAGGTaGAGCCCTAGCTGCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LFRESHRSLHLEGWGCACSLPCR*SPSCRR Trigger: GCGCCTGCAGCTAGGGCTCCACCTGCAGGGCAAAGA...GCACGCACAACCCCAGCCCTCCAGATGCAGAGACCGATGGCTCTCTCTAAAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR TCA 90 bp | GGACTGCAGGCCTGTCAGGATTCACTATCACTCCTAACAGAAGGGCCAAGTGGGCACAGTCTGGTCCAATaGAGCGGTGGCCACCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLQACQDSLSLLTEGPSGHSLVQ*SGGHPG Trigger: GCCCGGGTGGCCACCGCTTCATTGGACCAGACTGTG...CCCACTTGGCCCTTCTGTTAGGAGTGATAGTGAATCCTGACAGGCCTGCAGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR GCA 90 bp | TGGGGTTGTGCGTGCACGTGGGTGCGCGCCTCCATGCCTGTGAAACCACTGCTCCTGGCAGCATCTGGCTaGCTAGCATGTTCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WGCACTWVRASMPVKPLLLAASG*LACSSP Trigger: TGGAGAAGAACATGCTAGGCAGCCAGATGCTGCCAG...GAGCAGTGGTTTCACAGGCATGGAGGCGCGCACCCACGTGCACGCACAACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR TCA 90 bp | CTCTTTAGAGAGAGCCATCGGTCTCTGCATCTGGAGGGCTGGGGTTGTGCGTGCTGGGTGGGGCCAGAATaGTGGCTGCATTGGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LFRESHRSLHLEGWGCACWVGPE*WLHWSL Trigger: CAGTGACCAATGCAGCCATCATTCTGGCCCCACCCA...GCACGCACAACCCCAGCCCTCCAGATGCAGAGACCGATGGCTCTCTCTAAAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR CCA 90 bp | CAGGGATCCAAAGGACATCAGGCTTGGGGTCCTTTAGGGTTCCAGTCTGGGGCTGGTCCACCTGGAAGATaGAGCCATCGCTGCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QGSKGHQAWGPLGFQSGAGPPGR*SHRCLH Trigger: GTGGAGGCAGCGATGGCTCCATCTTCCAGGTGGACC...AGCCCCAGACTGGAACCCTAAAGGACCCCAAGCCTGATGTCCTTTGGATCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR CCA 90 bp | TCCAAAGGACATCAGGCTTGGGGTCCTTTAGGGTTCCAGTCTGGGGCTAGTCTGCGCAGGCCCCCACCCTaGGCTTCATCTCCATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKGHQAWGPLGFQSGASLRRPPP*ASSPCS Trigger: TGAGCATGGAGATGAAGCCCAGGGTGGGGGCCTGCG...CAGACTAGCCCCAGACTGGAACCCTAAAGGACCCCAAGCCTGATGTCCTTTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR TCA 90 bp | GGCCTGTCAGGATTCACTATCACTCCTAACAGAAGGGCCAAGTGGGACCTTCCAAGGTTGGCGCCCGAATaGAGCTCCCACACCACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLSGFTITPNRRAKWDLPRLAPE*SSHTTQ Trigger: CTGCGTGGTGTGGGAGCTTCATTCGGGCGCCAACCT...TGGAAGGTCCCACTTGGCCCTTCTGTTAGGAGTGATAGTGAATCCTGACAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR TCA 90 bp | ATTCTGAGGTCTGTCCTCACAGACGCTCTGGAAGATGTGGCATTCCCCCAAAATGGCCGCCTCGGTAGGTaGGCAGGTTGGCGCCCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ILRSVLTDALEDVAFPQNGRLGR*AGWRPN Trigger: ATTCGGGCGCCAACCTGCTCACCTACCGAGGCGGCC...ATTTTGGGGGAATGCCACATCTTCCAGAGCGTCTGTGAGGACAGACCTCAGAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR CCA 90 bp | GACCGTGCATCACATCCCTCTCATGTGCTCGACTTCCTATGGACTCATTTAGTGGGTCCAATGAAGCGGTaGCCACCCGGGCCATGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DRASHPSHVLDFLWTHLVGPMKR*PPGPWG Trigger: GCCCCATGGCCCGGGTGGCCACCGCTTCATTGGACC...CACTAAATGAGTCCATAGGAAGTCGAGCACATGAGAGGGATGTGATGCACGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR TCA 90 bp | GACCGTGCATCACATCCCTCTCATGTGCTCGACTTCCTATGGACTCATTTAGTGGCAGGTACTCGCCATTaGGTAGCGCCAGGCCTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: DRASHPSHVLDFLWTHLVAGTRH*VAPGLA Trigger: CGCGAGGCCTGGCGCTACTCAATGGCGAGTACCTGC...CACTAAATGAGTCCATAGGAAGTCGAGCACATGAGAGGGATGTGATGCACGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR GCA 90 bp | CTTCAAAACCCAGGATCAAATGTCCTGCTGAAAACCACGGCCACCCAGACCGTGCTGGACAACACTGCCTaGAGCTGCTCCAGACGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQNPGSNVLLKTTATQTVLDNTA*SCSRRS Trigger: GGAGCGTCTGGAGCAGCTGCAGGCAGTGTTGTCCAG...CACGGTCTGGGTGGCCGTGGTTTTCAGCAGGACATTTGATCCTGGGTTTTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR CCA 90 bp | GGACTGCAGGCCTGTCAGGATTCACTATCACTCCTAACAGAAGGGCCAAGTGGGGTGCAGGTCTGTGATTaGGAGCGTGTGCTGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: GLQACQDSLSLLTEGPSGVQVCD*ERVLGP Trigger: TGGTCCCAGCACACGCTCCCAATCACAGACCTGCAC...CCCACTTGGCCCTTCTGTTAGGAGTGATAGTGAATCCTGACAGGCCTGCAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CAA 72 bp | TCCTGGGGACCCATGGCTGGTAGAGTGCATACCTTCTaGTCTCTCTCCAGACCTTCCCTGAGGGAGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SWGPMAGRVHTF*SLSRPSLREQQ Trigger: CTGTTGCTCCCTCAGGGAAGGTCTGGAGAGAGACAAGAAGGTATGCACTCTACCAGCCATGGGTCCCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CAA 72 bp | AACACCCAGTCTCAAGAGACCTCCAGAGGCCTTTGGTaGGGTCCTGGGGACCCATGGCTGGTAGAGTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: NTQSQETSRGLW*GPGDPWLVECI Trigger: TATGCACTCTACCAGCCATGGGTCCCCAGGACCCAACCAAAGGCCTCTGGAGGTCTCTTGAGACTGGGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CAA 72 bp | AATGAACACCCAGTCTCAAGAGACCTCCAGAGGCCTTaGGTTGGGTCCTGGGGACCCATGGCTGGTAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NEHPVSRDLQRP*VGSWGPMAGRV Trigger: CACTCTACCAGCCATGGGTCCCCAGGACCCAACCAAAGGCCTCTGGAGGTCTCTTGAGACTGGGTGTTCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CAA 72 bp | CTCTCAGTCCAGCCACAGCAGGTGGGGACCCAATATTaGGGTGGCAAGTTATGGCTCCACCCAACATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSVQPQQVGTQY*GGKLWLHPTSA Trigger: GGCAGATGTTGGGTGGAGCCATAACTTGCCACCCAAATATTGGGTCCCCACCTGCTGTGGCTGGACTGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR GCA 90 bp | TATAATGAACACCCAGTCTCAAGAGACCTCCAGAGGCCTTTGGTTGGGTCCTGGCCAGGAGGTTCCCGGTaGAGACCTCCCACAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: YNEHPVSRDLQRPLVGSWPGGSR*RPPTGR Trigger: TCTACCTGTGGGAGGTCTGCACCGGGAACCTCCTGG...CCAGGACCCAACCAAAGGCCTCTGGAGGTCTCTTGAGACTGGGTGTTCATTATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR CCA 90 bp | CTGTCCTCACAGACGCTCTGGAAGATGTGGCATTCCCCCAAAATCCTGCACTGCCCTCCACAGAATATGTaGTGCTCGGCCAGGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LSSQTLWKMWHSPKILHCPPQNM*CSARSM Trigger: CATGGACCTGGCCGAGCACCACATATTCTGTGGAGG...GCAGTGCAGGATTTTGGGGGAATGCCACATCTTCCAGAGCGTCTGTGAGGACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR CCA 90 bp | GGCCTGTCAGGATTCACTATCACTCCTAACAGAAGGGCCAAGTGGGACCTTCCACTGCACAGGTCCACCTaGAAGATGGAGCCATCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLSGFTITPNRRAKWDLPLHRST*KMEPSL Trigger: CAGCGATGGCTCCATCTTCCAGGTGGACCTGTGCAG...TGGAAGGTCCCACTTGGCCCTTCTGTTAGGAGTGATAGTGAATCCTGACAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR TCA 90 bp | GGACTGCAGGCCTGTCAGGATTCACTATCACTCCTAACAGAAGGGCCAAGTGGGCCCGCTGAGACAAAATaGCTGCCATCCCCTGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLQACQDSLSLLTEGPSGPAETK*LPSPVN Trigger: GTTTACAGGGGATGGCAGTCATTTTGTCTCAGCGGG...CCCACTTGGCCCTTCTGTTAGGAGTGATAGTGAATCCTGACAGGCCTGCAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR GCA 90 bp | CTTCAAAACCCAGGATCAAATGTCCTGCTGAAAACCACGGCCACCCAGACCGTGACCTTCCCTGTGTTCTaGTCAGGCTGGAAGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQNPGSNVLLKTTATQTVTFPVF*SGWKLC Trigger: GCACAGCTTCCAGCCTGAGCAGAACACAGGGAAGGT...CACGGTCTGGGTGGCCGTGGTTTTCAGCAGGACATTTGATCCTGGGTTTTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR CCA 90 bp | CTTCAAAACCCAGGATCAAATGTCCTGCTGAAAACCACGGCCACCCAGACCGTGCAGAGCTTCACAGTCTaGTCCAATGAAGCGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LQNPGSNVLLKTTATQTVQSFTV*SNEAVA Trigger: GGCCACCGCTTCATTGGACCAGACTGTGAAGCTCTG...CACGGTCTGGGTGGCCGTGGTTTTCAGCAGGACATTTGATCCTGGGTTTTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR CCA 90 bp | GTCTATACTGTCACCTGGCACTCTTTCAGTAGGTCACCACACAGTCCTGGGTGCGTGTTCTGCTCAGGCTaGAAGCTGTGCTCCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VYTVTWHSFSRSPHSPGCVFCSG*KLCSLS Trigger: ACTGAGGGAGCACAGCTTCCAGCCTGAGCAGAACAC...GCACCCAGGACTGTGTGGTGACCTACTGAAAGAGTGCCAGGTGACAGTATAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CAA 72 bp | AGAGATCCTCAGGGTGCTCTTCCTGAAGCTGAGATGTaGCCAGCCTTAGCTCCCCTTCCTCTGACATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RDPQGALPEAEM*PALAPLPLTSP Trigger: AGGAGATGTCAGAGGAAGGGGAGCTAAGGCTGGCAACATCTCAGCTTCAGGAAGAGCACCCTGAGGATCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR TCA 90 bp | GACCGTGCATCACATCCCTCTCATGTGCTCGACTTCCTATGGACTCATTTAGTGCGAACAGGTCCCTGTTaGTCTTGCGCAGGCTACGCA | + |
|
Preference number: 4 (lower is better) Translates to: DRASHPSHVLDFLWTHLVRTGPC*SCAGYA Trigger: TGCGTAGCCTGCGCAAGATCAACAGGGACCTGTTCG...CACTAAATGAGTCCATAGGAAGTCGAGCACATGAGAGGGATGTGATGCACGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR GCA 90 bp | GGCCTGTCAGGATTCACTATCACTCCTAACAGAAGGGCCAAGTGGGACCTTCCACCTCCCACAGGTAGATaGTCTCTGCAATTCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLSGFTITPNRRAKWDLPPPTGR*SLQFLP Trigger: TGGCAGGAATTGCAGAGAGCATCTACCTGTGGGAGG...TGGAAGGTCCCACTTGGCCCTTCTGTTAGGAGTGATAGTGAATCCTGACAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR GCA 90 bp | CACCCTTCAAAACCCAGGATCAAATGTCCTGCTGAAAACCACGGCCACCCAGACGGCCAGAATGATGGCTaGATTGGTCACTGGGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HPSKPRIKCPAENHGHPDGQNDG*IGHWAF Trigger: AAAGGCCCAGTGACCAATGCAGCCATCATTCTGGCC...GTCTGGGTGGCCGTGGTTTTCAGCAGGACATTTGATCCTGGGTTTTGAAGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR GCA 90 bp | CTCTATAATTGTTCTGGAACCTTCTACAGCTCCCAGTTGTCCAGGTCCCCCAACGTAGCTGGACAACACTaGCTGCAGCTGCTCCAGACG | + |
|
Preference number: 4 (lower is better) Translates to: LYNCSGTFYSSQLSRSPNVAGQH*LQLLQT Trigger: CGTCTGGAGCAGCTGCAGGCAGTGTTGTCCAGCTAC...GTTGGGGGACCTGGACAACTGGGAGCTGTAGAAGGTTCCAGAACAATTATAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR TCA 90 bp | GGCCTGTCAGGATTCACTATCACTCCTAACAGAAGGGCCAAGTGGGACCTTCCACAGGCCCAGGACACATaGTTTTCTGTTGGAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLSGFTITPNRRAKWDLPQAQDT*FSVGAD Trigger: ATCAGCTCCAACAGAAAATCATGTGTCCTGGGCCTG...TGGAAGGTCCCACTTGGCCCTTCTGTTAGGAGTGATAGTGAATCCTGACAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR GCA 90 bp | GGCCTGTCAGGATTCACTATCACTCCTAACAGAAGGGCCAAGTGGGACCTTCCACAGAGAGCAGAACACTaGCGTCTGTTGACACTGACA | + |
|
Preference number: 4 (lower is better) Translates to: GLSGFTITPNRRAKWDLPQRAEH*RLLTLT Trigger: TGTCAGTGTCAACAGACGGCAGTGTTCTGCTCTCTG...TGGAAGGTCCCACTTGGCCCTTCTGTTAGGAGTGATAGTGAATCCTGACAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR CCA 90 bp | CACCCTTCAAAACCCAGGATCAAATGTCCTGCTGAAAACCACGGCCACCCAGACGACAGGCATGTCACTTaGTTCCTGTGTCCTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HPSKPRIKCPAENHGHPDDRHVT*FLCPLK Trigger: CTTCAAAGGACACAGGAACCAAGTGACATGCCTGTC...GTCTGGGTGGCCGTGGTTTTCAGCAGGACATTTGATCCTGGGTTTTGAAGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CAA 72 bp | CACAAGGGCAGACGCTGCCCTCCTGGGTCTCAGGACTaGCATTACAATAGGCACTCTATAATTGTTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HKGRRCPPGSQD*HYNRHSIIVLE Trigger: TTCCAGAACAATTATAGAGTGCCTATTGTAATGCAAGTCCTGAGACCCAGGAGGGCAGCGTCTGCCCTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR GCA 90 bp | TCTGAGACAGGGTTTTATTATATAGCCCTGACTAGTCTGAACTCCTTATTTAGACTGCCTGTAGCACACTaGAGAGGCTCCAGGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SETGFYYIALTSLNSLFRLPVAH*RGSRPA Trigger: CGCTGGCCTGGAGCCTCTGCAGTGTGCTACAGGCAG...TCTAAATAAGGAGTTCAGACTAGTCAGGGCTATATAATAAAACCCTGTCTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| 3UTR CAA 72 bp | GTGGCAACAGCTCTGATAAATCACAGATCTTCTGGATaGTTAAGCAGGGCTGTCAGTTGCAGGCAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VATALINHRSSG*LSRAVSCRQLS Trigger: AGAAAGCTGCCTGCAACTGACAGCCCTGCTTAACAATCCAGAAGATCTGTGATTTATCAGAGCTGTTGCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR GCA 90 bp | TTTAGTCCATCCTTTGTTAAAACACTAGATCACAGCCCCGTGGCAAGTGTTTGTCAGGTAGATGCTCTCTaGAATTCCTGCCAGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: FSPSFVKTLDHSPVASVCQVDAL*NSCQDI Trigger: TATGTCCTGGCAGGAATTGCAGAGAGCATCTACCTG...ACAAACACTTGCCACGGGGCTGTGATCTAGTGTTTTAACAAAGGATGGACTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR CCA 90 bp | TCTCAGGACTTGCATTACAATAGGCACTCTATAATTGTTCTGGAACCTTCTACACTCACTGATTCATCGTaGGAGCCAGAGAGCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SQDLHYNRHSIIVLEPSTLTDSS*EPESRT Trigger: TGTTCTGCTCTCTGGCTCCCACGATGAATCAGTGAG...TGTAGAAGGTTCCAGAACAATTATAGAGTGCCTATTGTAATGCAAGTCCTGAGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS-3UTR TCA 90 bp | TCTGAGACAGGGTTTTATTATATAGCCCTGACTAGTCTGAACTCCTTATTTAGAGGTTCCTGTGTCCTTTaGAGACCTTCCCTGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SETGFYYIALTSLNSLFRGSCVL*RPSLCS Trigger: AGAACACAGGGAAGGTCTTCAAAGGACACAGGAACC...TCTAAATAAGGAGTTCAGACTAGTCAGGGCTATATAATAAAACCCTGTCTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS TCA 90 bp | AGATGTAGTTCTTGCCCTGCTGCGCCGCCAGCAGGTACTCGCCATTaGGTAGCGCCAGGCCTCGCGGCCCCGCTTGGCCGCCTCGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: RCSSCPAAPPAGTRH*VAPGLAAPLGRLGR Trigger: CCTACCGAGGCGGCCAAGCGGGGCCGCGAGGCCTGGCGCTACTCAATGGCGAGTACCTGCTGGCGGCGCAGCAGGGCAAGAACTACATCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS TCA 90 bp | CAGGTCCCCCGAGGAGATGGCCCAGAGCTTCACAGTCTGGTCCAATaGAGCGGTGGCCACCCGGGCCATGGGGCCTCCGAAGCCGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QVPRGDGPELHSLVQ*SGGHPGHGASEAAV Trigger: CACTGCGGCTTCGGAGGCCCCATGGCCCGGGTGGCCACCGCTTCATTGGACCAGACTGTGAAGCTCTGGGCCATCTCCTCGGGGGACCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
||
| CDS CCA 90 bp | CCGAGGAGATGGCCCAGAGCTTCACAGTCTGGTCCAATGAAGCGGTaGCCACCCGGGCCATGGGGCCTCCGAAGCCGCAGTGCAGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRRWPRASQSGPMKR*PPGPWGLRSRSAGL Trigger: CAGACCTGCACTGCGGCTTCGGAGGCCCCATGGCCCGGGTGGCCACCGCTTCATTGGACCAGACTGTGAAGCTCTGGGCCATCTCCTCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS TCA 90 bp | TGGCCACCCGGGCCATGGGGCCTCCGAAGCCGCAGTGCAGGTCTGTaGTTGGGAGCGTGTGCTGGGACCAGACATGTCTTGGGGCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WPPGPWGLRSRSAGL*LGACAGTRHVLGQG Trigger: TCCTTGCCCCAAGACATGTCTGGTCCCAGCACACGCTCCCAATCACAGACCTGCACTGCGGCTTCGGAGGCCCCATGGCCCGGGTGGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 90 bp | GTTGGCGCCCGAATGAAGCTCCCACACCACGCAGCTCCAGAGCTGTaGCGCGGCGTCAGTACACACCACCACTTCCATGGGCGCCGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VGARMKLPHHAAPEL*RGVSTHHHFHGRRH Trigger: ATGGCGGCGCCCATGGAAGTGGTGGTGTGTACTGACGCCGCGGCACAGCTCTGGAGCTGCGTGGTGTGGGAGCTTCATTCGGGCGCCAAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CCA 90 bp | TTGCCCTGCAGGTGGAGCCCTAGCTGCAGGCGCAGGCCCCCACCCTaGGCTTCATCTCCATGCTCAGCCCCCAGCAGGTGCTTGTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPCRWSPSCRRRPPP*ASSPCSAPSRCLLK Trigger: CTTCAACAAGCACCTGCTGGGGGCTGAGCATGGAGATGAAGCCCAGGGTGGGGGCCTGCGCCTGCAGCTAGGGCTCCACCTGCAGGGCAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CCA 90 bp | CACCCGGGCCATGGGGCCTCCGAAGCCGCAGTGCAGGTCTGTGATTaGGAGCGTGTGCTGGGACCAGACATGTCTTGGGGCAAGGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: HPGHGASEAAVQVCD*ERVLGPDMSWGKDP Trigger: AGGATCCTTGCCCCAAGACATGTCTGGTCCCAGCACACGCTCCCAATCACAGACCTGCACTGCGGCTTCGGAGGCCCCATGGCCCGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CCA 90 bp | GGGCCTCCGAAGCCGCAGTGCAGGTCTGTGATTGGGAGCGTGTGCTaGGACCAGACATGTCTTGGGGCAAGGATCCTGGATGGGTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GPPKPQCRSVIGSVC*DQTCLGARILDGSA Trigger: GGCAGACCCATCCAGGATCCTTGCCCCAAGACATGTCTGGTCCCAGCACACGCTCCCAATCACAGACCTGCACTGCGGCTTCGGAGGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 90 bp | CATGTCTTGGGGCAAGGATCCTGGATGGGTCTGCCTGTAGCACACTaGAGAGGCTCCAGGCCAGCGCCAAGCAGTCCTTGCCCGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: HVLGQGSWMGLPVAH*RGSRPAPSSPCPLR Trigger: TCTCAGCGGGCAAGGACTGCTTGGCGCTGGCCTGGAGCCTCTGCAGTGTGCTACAGGCAGACCCATCCAGGATCCTTGCCCCAAGACATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 90 bp | GTCCGGGCCAGCTGCACAGGTCCACCTGGAAGATGGAGCCATCGCTaGCTCCACAGAATATGTGGTGCTCGGCCAGGTCCATGGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: VRASCTGPPGRWSHR*LHRICGARPGPWSQ Trigger: CTGTGACCATGGACCTGGCCGAGCACCACATATTCTGTGGAGGCAGCGATGGCTCCATCTTCCAGGTGGACCTGTGCAGCTGGCCCGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 90 bp | TGTTCTGCTCAGGCTGGAAGCTGTGCTCCCTCAGTCCGGGCCAGCTaGACAGGTCCACCTGGAAGATGGAGCCATCGCTGCCTCCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: CSAQAGSCAPSVRAS*TGPPGRWSHRCLHR Trigger: TCTGTGGAGGCAGCGATGGCTCCATCTTCCAGGTGGACCTGTGCAGCTGGCCCGGACTGAGGGAGCACAGCTTCCAGCCTGAGCAGAACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CCA 90 bp | TGTGCTCCCTCAGTCCGGGCCAGCTGCACAGGTCCACCTGGAAGATaGAGCCATCGCTGCCTCCACAGAATATGTGGTGCTCGGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CAPSVRASCTGPPGR*SHRCLHRICGARPG Trigger: ACCTGGCCGAGCACCACATATTCTGTGGAGGCAGCGATGGCTCCATCTTCCAGGTGGACCTGTGCAGCTGGCCCGGACTGAGGGAGCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 90 bp | ATGGGGCCTCCGAAGCCGCAGTGCAGGTCTGTGATTGGGAGCGTGTaGTGGGACCAGACATGTCTTGGGGCAAGGATCCTGGATGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: MGPPKPQCRSVIGSV*WDQTCLGARILDGS Trigger: AGACCCATCCAGGATCCTTGCCCCAAGACATGTCTGGTCCCAGCACACGCTCCCAATCACAGACCTGCACTGCGGCTTCGGAGGCCCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CCA 90 bp | TGGAAGCTGTGCTCCCTCAGTCCGGGCCAGCTGCACAGGTCCACCTaGAAGATGGAGCCATCGCTGCCTCCACAGAATATGTGGTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: WKLCSLSPGQLHRST*KMEPSLPPQNMWCS Trigger: CGAGCACCACATATTCTGTGGAGGCAGCGATGGCTCCATCTTCCAGGTGGACCTGTGCAGCTGGCCCGGACTGAGGGAGCACAGCTTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS TCA 90 bp | CACACTGCAGAGGCTCCAGGCCAGCGCCAAGCAGTCCTTGCCCGCTaGGACAAAATGACTGCCATCCCCTGTAAACTTCAGGCAGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: HTAEAPGQRQAVLAR*DKMTAIPCKLQAGH Trigger: GTGTCCTGCCTGAAGTTTACAGGGGATGGCAGTCATTTTGTCTCAGCGGGCAAGGACTGCTTGGCGCTGGCCTGGAGCCTCTGCAGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 90 bp | CATGTCACTTGGTTCCTGTGTCCTTTGAAGACCTTCCCTGTGTTCTaGTCAGGCTGGAAGCTGTGCTCCCTCAGTCCGGGCCAGCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: HVTWFLCPLKTFPVF*SGWKLCSLSPGQLH Trigger: GTGCAGCTGGCCCGGACTGAGGGAGCACAGCTTCCAGCCTGAGCAGAACACAGGGAAGGTCTTCAAAGGACACAGGAACCAAGTGACATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 90 bp | CCTGAATTCAGGGTTCAGCATGCTGGGTGGGGCCAGAATGATGGCTaGATTGGTCACTGGGCCTTTGAGGGTGACTGTGCGCAAGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: PEFRVQHAGWGQNDG*IGHWAFEGDCAQAL Trigger: CAGTGCTTGCGCACAGTCACCCTCAAAGGCCCAGTGACCAATGCAGCCATCATTCTGGCCCCACCCAGCATGCTGAACCCTGAATTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS-3UTR CAA 90 bp | CACCCTTCAAAACCCAGGATCAAATGTCCTGCTGAAAACCACGGCCACCCAGACAGCAGGTACTCGCCATaGAGTAGCGCCAGGCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: HPSKPRIKCPAENHGHPDSRYSP*SSARPR Trigger: GCGAGGCCTGGCGCTACTCAATGGCGAGTACCTGCT...GTCTGGGTGGCCGTGGTTTTCAGCAGGACATTTGATCCTGGGTTTTGAAGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS TCA 90 bp | CTCCACAGAATATGTGGTGCTCGGCCAGGTCCATGGTCACAGATGTaGTGCCCATGTCAAACAAGACAGACAGCAGCAGGTCCCCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LHRICGARPGPWSQM*CPCQTRQTAAGPPR Trigger: CCTCGGGGGACCTGCTGCTGTCTGTCTTGTTTGACATGGGCATCACATCTGTGACCATGGACCTGGCCGAGCACCACATATTCTGTGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 90 bp | GACCAGGAGGTTCCCGGTGCAGACCTCCCACAGGTAGATGCTCTCTaGAATTCCTGCCAGGACATACAAGCCATTAGGTGCTGTGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: DQEVPGADLPQVDAL*NSCQDIQAIRCCGQ Trigger: CTGACCACAGCACCTAATGGCTTGTATGTCCTGGCAGGAATTGCAGAGAGCATCTACCTGTGGGAGGTCTGCACCGGGAACCTCCTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CCA 90 bp | AGGTCCACCTGGAAGATGGAGCCATCGCTGCCTCCACAGAATATGTaGTGCTCGGCCAGGTCCATGGTCACAGATGTGATGCCCATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSTWKMEPSLPPQNM*CSARSMVTDVMPMS Trigger: TGACATGGGCATCACATCTGTGACCATGGACCTGGCCGAGCACCACATATTCTGTGGAGGCAGCGATGGCTCCATCTTCCAGGTGGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 90 bp | GTTCCCGGTGCAGACCTCCCACAGGTAGATGCTCTCTGCAATTCCTaGCAGGACATACAAGCCATTAGGTGCTGTGGTCAGACAGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VPGADLPQVDALCNS*QDIQAIRCCGQTGD Trigger: GTCACCTGTCTGACCACAGCACCTAATGGCTTGTATGTCCTGGCAGGAATTGCAGAGAGCATCTACCTGTGGGAGGTCTGCACCGGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 90 bp | TCCACCTGGAAGATGGAGCCATCGCTGCCTCCACAGAATATGTGGTaGTCGGCCAGGTCCATGGTCACAGATGTGATGCCCATGTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: STWKMEPSLPPQNMW*SARSMVTDVMPMSN Trigger: GTTTGACATGGGCATCACATCTGTGACCATGGACCTGGCCGAGCACCACATATTCTGTGGAGGCAGCGATGGCTCCATCTTCCAGGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 90 bp | CCCACAGCCTCACTGATTCATCGTGGGAGCCAGAGAGCAGAACACTaGCGTCTGTTGACACTGACAGGCATGTCACTTGGTTCCTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PTASLIHRGSQRAEH*RLLTLTGMSLGSCV Trigger: GACACAGGAACCAAGTGACATGCCTGTCAGTGTCAACAGACGGCAGTGTTCTGCTCTCTGGCTCCCACGATGAATCAGTGAGGCTGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CCA 90 bp | AAGCACTGCTTGCTCTTCACGTCCCACAGCCTCACTGATTCATCGTaGGAGCCAGAGAGCAGAACACTGCCGTCTGTTGACACTGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: KHCLLFTSHSLTDSS*EPESRTLPSVDTDR Trigger: CCTGTCAGTGTCAACAGACGGCAGTGTTCTGCTCTCTGGCTCCCACGATGAATCAGTGAGGCTGTGGGACGTGAAGAGCAAGCAGTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS-3UTR CAA 90 bp | CTTCAAAACCCAGGATCAAATGTCCTGCTGAAAACCACGGCCACCCAGACCGTGTCGAACAGGTCCCTGTaGATCTTGCGCAGGCTACGC | + |
|
Preference number: 5 (lower is better) Translates to: LQNPGSNVLLKTTATQTVSNRSL*ILRRLR Trigger: GCGTAGCCTGCGCAAGATCAACAGGGACCTGTTCGA...CACGGTCTGGGTGGCCGTGGTTTTCAGCAGGACATTTGATCCTGGGTTTTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS TCA 90 bp | CGTCTGTTGACACTGACAGGCATGTCACTTGGTTCCTGTGTCCTTTaGAGACCTTCCCTGTGTTCTGCTCAGGCTGGAAGCTGTGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RLLTLTGMSLGSCVL*RPSLCSAQAGSCAP Trigger: GGGAGCACAGCTTCCAGCCTGAGCAGAACACAGGGAAGGTCTTCAAAGGACACAGGAACCAAGTGACATGCCTGTCAGTGTCAACAGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS-3UTR CAA 90 bp | CAGGGATCCAAAGGACATCAGGCTTGGGGTCCTTTAGGGTTCCAGTCTGGGGCTTGGTTCCTGTGTCCTTaGAAGACCTTCCCTGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QGSKGHQAWGPLGFQSGAWFLCP*KTFPVF Trigger: GAACACAGGGAAGGTCTTCAAAGGACACAGGAACCA...AGCCCCAGACTGGAACCCTAAAGGACCCCAAGCCTGATGTCCTTTGGATCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS-3UTR CAA 90 bp | GGACTGCAGGCCTGTCAGGATTCACTATCACTCCTAACAGAAGGGCCAAGTGGGGAACACTGCCGTCTGTaGACACTGACAGGCATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GLQACQDSLSLLTEGPSGEHCRL*TLTGMS Trigger: TGACATGCCTGTCAGTGTCAACAGACGGCAGTGTTC...CCCACTTGGCCCTTCTGTTAGGAGTGATAGTGAATCCTGACAGGCCTGCAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 90 bp | GTAGATGCTCTCTGCAATTCCTGCCAGGACATACAAGCCATTAGGTaGTGTGGTCAGACAGGTGACAGGCCCAGGACACATGATTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VDALCNSCQDIQAIR*CGQTGDRPRTHDFL Trigger: CAGAAAATCATGTGTCCTGGGCCTGTCACCTGTCTGACCACAGCACCTAATGGCTTGTATGTCCTGGCAGGAATTGCAGAGAGCATCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS-3UTR CAA 90 bp | CGCGCCTCCATGCCTGTGAAACCACTGCTCTCGAGATCACAGAATTCCCTAGTGACACATGATTTTCTGTaGGAGCTGATCCTTACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RASMPVKPLLSRSQNSLVTHDFL*ELILTL Trigger: CAGCGTAAGGATCAGCTCCAACAGAAAATCATGTGT...CACTAGGGAATTCTGTGATCTCGAGAGCAGTGGTTTCACAGGCATGGAGGCGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS TCA 72 bp | TCTTGCCCTGCTGCGCCGCCAGCAGGTACTCGCCATTaGGTAGCGCCAGGCCTCGCGGCCCCGCTTGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SCPAAPPAGTRH*VAPGLAAPLGR Trigger: GCGGCCAAGCGGGGCCGCGAGGCCTGGCGCTACTCAATGGCGAGTACCTGCTGGCGGCGCAGCAGGGCAAGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS TCA 72 bp | CCAGGCCTCGCGGCCCCGCTTGGCCGCCTCGGTAGGTaGGCAGGTTGGCGCCCGAATGAAGCTCCCACACCA | + |
|
Preference number: 6 (lower is better) Translates to: PGLAAPLGRLGR*AGWRPNEAPTP Trigger: TGGTGTGGGAGCTTCATTCGGGCGCCAACCTGCTCACCTACCGAGGCGGCCAAGCGGGGCCGCGAGGCCTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CAA 72 bp | TTCTTGCCCTGCTGCGCCGCCAGCAGGTACTCGCCATaGAGTAGCGCCAGGCCTCGCGGCCCCGCTTGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: FLPCCAASRYSP*SSARPRGPAWP Trigger: CGGCCAAGCGGGGCCGCGAGGCCTGGCGCTACTCAATGGCGAGTACCTGCTGGCGGCGCAGCAGGGCAAGAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 72 bp | GTGGCCACCCGGGCCATGGGGCCTCCGAAGCCGCAGTaGAGGTCTGTGATTGGGAGCGTGTGCTGGGACCAG | + |
|
Preference number: 6 (lower is better) Translates to: VATRAMGPPKPQ*RSVIGSVCWDQ Trigger: CTGGTCCCAGCACACGCTCCCAATCACAGACCTGCACTGCGGCTTCGGAGGCCCCATGGCCCGGGTGGCCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CCA 72 bp | AGGTGGAGCCCTAGCTGCAGGCGCAGGCCCCCACCCTaGGCTTCATCTCCATGCTCAGCCCCCAGCAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RWSPSCRRRPPP*ASSPCSAPSRC Trigger: GCACCTGCTGGGGGCTGAGCATGGAGATGAAGCCCAGGGTGGGGGCCTGCGCCTGCAGCTAGGGCTCCACCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CCA 72 bp | TGGCCCAGAGCTTCACAGTCTGGTCCAATGAAGCGGTaGCCACCCGGGCCATGGGGCCTCCGAAGCCGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: WPRASQSGPMKR*PPGPWGLRSRS Trigger: ACTGCGGCTTCGGAGGCCCCATGGCCCGGGTGGCCACCGCTTCATTGGACCAGACTGTGAAGCTCTGGGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS TCA 72 bp | CGAGGAGATGGCCCAGAGCTTCACAGTCTGGTCCAATaGAGCGGTGGCCACCCGGGCCATGGGGCCTCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: RGDGPELHSLVQ*SGGHPGHGASE Trigger: TTCGGAGGCCCCATGGCCCGGGTGGCCACCGCTTCATTGGACCAGACTGTGAAGCTCTGGGCCATCTCCTCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 72 bp | CAGGCTGGAAGCTGTGCTCCCTCAGTCCGGGCCAGCTaGACAGGTCCACCTGGAAGATGGAGCCATCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QAGSCAPSVRAS*TGPPGRWSHRC Trigger: GCAGCGATGGCTCCATCTTCCAGGTGGACCTGTGCAGCTGGCCCGGACTGAGGGAGCACAGCTTCCAGCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS TCA 72 bp | GGGCCATGGGGCCTCCGAAGCCGCAGTGCAGGTCTGTaGTTGGGAGCGTGTGCTGGGACCAGACATGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GPWGLRSRSAGL*LGACAGTRHVL Trigger: CAAGACATGTCTGGTCCCAGCACACGCTCCCAATCACAGACCTGCACTGCGGCTTCGGAGGCCCCATGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 72 bp | GGGCAAGGATCCTGGATGGGTCTGCCTGTAGCACACTaGAGAGGCTCCAGGCCAGCGCCAAGCAGTCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GQGSWMGLPVAH*RGSRPAPSSPC Trigger: GCAAGGACTGCTTGGCGCTGGCCTGGAGCCTCTGCAGTGTGCTACAGGCAGACCCATCCAGGATCCTTGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 72 bp | CGAATGAAGCTCCCACACCACGCAGCTCCAGAGCTGTaGCGCGGCGTCAGTACACACCACCACTTCCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: RMKLPHHAAPEL*RGVSTHHHFHG Trigger: CCCATGGAAGTGGTGGTGTGTACTGACGCCGCGGCACAGCTCTGGAGCTGCGTGGTGTGGGAGCTTCATTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 72 bp | CCGAAGCCGCAGTGCAGGTCTGTGATTGGGAGCGTGTaGTGGGACCAGACATGTCTTGGGGCAAGGATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PKPQCRSVIGSV*WDQTCLGARIL Trigger: CAGGATCCTTGCCCCAAGACATGTCTGGTCCCAGCACACGCTCCCAATCACAGACCTGCACTGCGGCTTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CCA 72 bp | TGCTCCCTCAGTCCGGGCCAGCTGCACAGGTCCACCTaGAAGATGGAGCCATCGCTGCCTCCACAGAATATG | + |
|
Preference number: 6 (lower is better) Translates to: CSLSPGQLHRST*KMEPSLPPQNM Trigger: CATATTCTGTGGAGGCAGCGATGGCTCCATCTTCCAGGTGGACCTGTGCAGCTGGCCCGGACTGAGGGAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 72 bp | AGCTGCACAGGTCCACCTGGAAGATGGAGCCATCGCTaGCTCCACAGAATATGTGGTGCTCGGCCAGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SCTGPPGRWSHR*LHRICGARPGP Trigger: TGGACCTGGCCGAGCACCACATATTCTGTGGAGGCAGCGATGGCTCCATCTTCCAGGTGGACCTGTGCAGCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 72 bp | AGGGTTCAGCATGCTGGGTGGGGCCAGAATGATGGCTaGATTGGTCACTGGGCCTTTGAGGGTGACTGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: RVQHAGWGQNDG*IGHWAFEGDCA Trigger: CGCACAGTCACCCTCAAAGGCCCAGTGACCAATGCAGCCATCATTCTGGCCCCACCCAGCATGCTGAACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CCA 72 bp | TGTGCTGGGACCAGACATGTCTTGGGGCAAGGATCCTaGATGGGTCTGCCTGTAGCACACTGCAGAGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CAGTRHVLGQGS*MGLPVAHCRGS Trigger: GGAGCCTCTGCAGTGTGCTACAGGCAGACCCATCCAGGATCCTTGCCCCAAGACATGTCTGGTCCCAGCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CCA 72 bp | TCAGTCCGGGCCAGCTGCACAGGTCCACCTGGAAGATaGAGCCATCGCTGCCTCCACAGAATATGTGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SVRASCTGPPGR*SHRCLHRICGA Trigger: AGCACCACATATTCTGTGGAGGCAGCGATGGCTCCATCTTCCAGGTGGACCTGTGCAGCTGGCCCGGACTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CCA 72 bp | GCTGGGTGGGGCCAGAATGATGGCTGCATTGGTCACTaGGCCTTTGAGGGTGACTGTGCGCAAGCACTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: AGWGQNDGCIGH*AFEGDCAQALL Trigger: AAGCAGTGCTTGCGCACAGTCACCCTCAAAGGCCCAGTGACCAATGCAGCCATCATTCTGGCCCCACCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CAA 90 bp | GCATTGGTCACTGGGCCTTTGAGGGTGACTGTGCGCAAGCACTGCTaGCTCTTCACGTCCCACAGCCTCACTGATTCATCGTGGGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ALVTGPLRVTVRKHC*LFTSHSLTDSSWEP Trigger: TGGCTCCCACGATGAATCAGTGAGGCTGTGGGACGTGAAGAGCAAGCAGTGCTTGCGCACAGTCACCCTCAAAGGCCCAGTGACCAATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS TCA 72 bp | GAGGCTCCAGGCCAGCGCCAAGCAGTCCTTGCCCGCTaGGACAAAATGACTGCCATCCCCTGTAAACTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: EAPGQRQAVLAR*DKMTAIPCKLQ Trigger: CTGAAGTTTACAGGGGATGGCAGTCATTTTGTCTCAGCGGGCAAGGACTGCTTGGCGCTGGCCTGGAGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CCA 72 bp | AAGCCGCAGTGCAGGTCTGTGATTGGGAGCGTGTGCTaGGACCAGACATGTCTTGGGGCAAGGATCCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: KPQCRSVIGSVC*DQTCLGARILD Trigger: ATCCAGGATCCTTGCCCCAAGACATGTCTGGTCCCAGCACACGCTCCCAATCACAGACCTGCACTGCGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CAA 72 bp | GGGGCCAGAATGATGGCTGCATTGGTCACTGGGCCTTaGAGGGTGACTGTGCGCAAGCACTGCTTGCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GARMMAALVTGP*RVTVRKHCLLF Trigger: GAAGAGCAAGCAGTGCTTGCGCACAGTCACCCTCAAAGGCCCAGTGACCAATGCAGCCATCATTCTGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CAA 72 bp | TTCAGCATGCTGGGTGGGGCCAGAATGATGGCTGCATaGGTCACTGGGCCTTTGAGGGTGACTGTGCGCAAG | + |
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Preference number: 6 (lower is better) Translates to: FSMLGGARMMAA*VTGPLRVTVRK Trigger: CTTGCGCACAGTCACCCTCAAAGGCCCAGTGACCAATGCAGCCATCATTCTGGCCCCACCCAGCATGCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CAA 90 bp | AATTCAGGGTTCAGCATGCTGGGTGGGGCCAGAATGATGGCTGCATaGGTCACTGGGCCTTTGAGGGTGACTGTGCGCAAGCACTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: NSGFSMLGGARMMAA*VTGPLRVTVRKHCL Trigger: CAAGCAGTGCTTGCGCACAGTCACCCTCAAAGGCCCAGTGACCAATGCAGCCATCATTCTGGCCCCACCCAGCATGCTGAACCCTGAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CAA 90 bp | GAGGGCCGTGTGATGATGCGCGTGGAGAAGTCGAACAGGTCCCTGTaGATCTTGCGCAGGCTACGCACCTCATCCTCCAGATCAAACACA | + |
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Preference number: 6 (lower is better) Translates to: EGRVMMRVEKSNRSL*ILRRLRTSSSRSNT Trigger: TGTGTTTGATCTGGAGGATGAGGTGCGTAGCCTGCGCAAGATCAACAGGGACCTGTTCGACTTCTCCACGCGCATCATCACACGGCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS TCA 72 bp | CAAGCACTGCTTGCTCTTCACGTCCCACAGCCTCACTaGTTCATCGTGGGAGCCAGAGAGCAGAACACTGCC | + |
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Preference number: 6 (lower is better) Translates to: QALLALHVPQPH*FIVGAREQNTA Trigger: GGCAGTGTTCTGCTCTCTGGCTCCCACGATGAATCAGTGAGGCTGTGGGACGTGAAGAGCAAGCAGTGCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 72 bp | CCAGGAGGTTCCCGGTGCAGACCTCCCACAGGTAGATaGTCTCTGCAATTCCTGCCAGGACATACAAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: PGGSRCRPPTGR*SLQFLPGHTSH Trigger: ATGGCTTGTATGTCCTGGCAGGAATTGCAGAGAGCATCTACCTGTGGGAGGTCTGCACCGGGAACCTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 72 bp | AAGATGGAGCCATCGCTGCCTCCACAGAATATGTGGTaGTCGGCCAGGTCCATGGTCACAGATGTGATGCCC | + |
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Preference number: 6 (lower is better) Translates to: KMEPSLPPQNMW*SARSMVTDVMP Trigger: GGGCATCACATCTGTGACCATGGACCTGGCCGAGCACCACATATTCTGTGGAGGCAGCGATGGCTCCATCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CAA 72 bp | GTGATGATGCGCGTGGAGAAGTCGAACAGGTCCCTGTaGATCTTGCGCAGGCTACGCACCTCATCCTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: VMMRVEKSNRSL*ILRRLRTSSSR Trigger: TCTGGAGGATGAGGTGCGTAGCCTGCGCAAGATCAACAGGGACCTGTTCGACTTCTCCACGCGCATCATCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CAA 90 bp | CGTGTGATGATGCGCGTGGAGAAGTCGAACAGGTCCCTGTTGATCTaGCGCAGGCTACGCACCTCATCCTCCAGATCAAACACACGTGCT | + |
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Preference number: 6 (lower is better) Translates to: RVMMRVEKSNRSLLI*RRLRTSSSRSNTRA Trigger: AGCACGTGTGTTTGATCTGGAGGATGAGGTGCGTAGCCTGCGCAAGATCAACAGGGACCTGTTCGACTTCTCCACGCGCATCATCACACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 72 bp | GTTCCCGGTGCAGACCTCCCACAGGTAGATGCTCTCTaGAATTCCTGCCAGGACATACAAGCCATTAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: VPGADLPQVDAL*NSCQDIQAIRC Trigger: GCACCTAATGGCTTGTATGTCCTGGCAGGAATTGCAGAGAGCATCTACCTGTGGGAGGTCTGCACCGGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CCA 72 bp | TGGAAGATGGAGCCATCGCTGCCTCCACAGAATATGTaGTGCTCGGCCAGGTCCATGGTCACAGATGTGATG | + |
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Preference number: 6 (lower is better) Translates to: WKMEPSLPPQNM*CSARSMVTDVM Trigger: CATCACATCTGTGACCATGGACCTGGCCGAGCACCACATATTCTGTGGAGGCAGCGATGGCTCCATCTTCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CCA 72 bp | TTGCTCTTCACGTCCCACAGCCTCACTGATTCATCGTaGGAGCCAGAGAGCAGAACACTGCCGTCTGTTGAC | + |
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Preference number: 6 (lower is better) Translates to: LLFTSHSLTDSS*EPESRTLPSVD Trigger: GTCAACAGACGGCAGTGTTCTGCTCTCTGGCTCCCACGATGAATCAGTGAGGCTGTGGGACGTGAAGAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CAA 72 bp | CATCGTGGGAGCCAGAGAGCAGAACACTGCCGTCTGTaGACACTGACAGGCATGTCACTTGGTTCCTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: HRGSQRAEHCRL*TLTGMSLGSCV Trigger: GACACAGGAACCAAGTGACATGCCTGTCAGTGTCAACAGACGGCAGTGTTCTGCTCTCTGGCTCCCACGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CAA 72 bp | ATGCGCGTGGAGAAGTCGAACAGGTCCCTGTTGATCTaGCGCAGGCTACGCACCTCATCCTCCAGATCAAAC | + |
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Preference number: 6 (lower is better) Translates to: MRVEKSNRSLLI*RRLRTSSSRSN Trigger: GTTTGATCTGGAGGATGAGGTGCGTAGCCTGCGCAAGATCAACAGGGACCTGTTCGACTTCTCCACGCGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 72 bp | GCAGACCTCCCACAGGTAGATGCTCTCTGCAATTCCTaGCAGGACATACAAGCCATTAGGTGCTGTGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: ADLPQVDALCNS*QDIQAIRCCGQ Trigger: CTGACCACAGCACCTAATGGCTTGTATGTCCTGGCAGGAATTGCAGAGAGCATCTACCTGTGGGAGGTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS GCA 72 bp | CCTCCAGATCAAACACACGTGCTGGCAGCATCTGGCTaGCTAGCATGTTCTTCTCCAGGTAGCTGGACAACA | + |
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Preference number: 6 (lower is better) Translates to: PPDQTHVLAASG*LACSSPGSWTT Trigger: TGTTGTCCAGCTACCTGGAGAAGAACATGCTAGGCAGCCAGATGCTGCCAGCACGTGTGTTTGATCTGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS TCA 72 bp | ATATGTGGTGCTCGGCCAGGTCCATGGTCACAGATGTaGTGCCCATGTCAAACAAGACAGACAGCAGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: ICGARPGPWSQM*CPCQTRQTAAG Trigger: ACCTGCTGCTGTCTGTCTTGTTTGACATGGGCATCACATCTGTGACCATGGACCTGGCCGAGCACCACATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS TCA 72 bp | ACACTGACAGGCATGTCACTTGGTTCCTGTGTCCTTTaGAGACCTTCCCTGTGTTCTGCTCAGGCTGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: TLTGMSLGSCVL*RPSLCSAQAGS Trigger: GCTTCCAGCCTGAGCAGAACACAGGGAAGGTCTTCAAAGGACACAGGAACCAAGTGACATGCCTGTCAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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| CDS CCA 72 bp | ACACTGCCGTCTGTTGACACTGACAGGCATGTCACTTaGTTCCTGTGTCCTTTGAAGACCTTCCCTGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: TLPSVDTDRHVT*FLCPLKTFPVF Trigger: GAACACAGGGAAGGTCTTCAAAGGACACAGGAACCAAGTGACATGCCTGTCAGTGTCAACAGACGGCAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045247.9 |
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