Pregenerated sensors for WDR12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026019Ensembl transcript IDs: ENSMUST00000027173.15, ENSMUST00000117438.8, ENSMUST00000122038.8
Found 216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTGTGAGCTGCCAAATGGATGCAGGAAATGGAATCCAGGTCCTTTaGAGGAGCAGCAAGTGCTCTGAACTGCTGAGCTGCCCCTCCAAC | + |
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Preference number: 1 (lower is better) Translates to: AVSCQMDAGNGIQVL*RSSKCSELLSCPSN Trigger: GTTGGAGGGGCAGCTCAGCAGTTCAGAGCACTTGCTGCTCCTGCAAAGGACCTGGATTCCATTTCCTGCATCCATTTGGCAGCTCACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR TCA 90 bp | ATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTTCGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACT | + |
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Preference number: 1 (lower is better) Translates to: ISLRMVVSHHVVAGI*TSDLRKSSRVLLPT Trigger: AGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR CCA 90 bp | GTGTCAGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTTCGGACCTTCGGAAGAGCAGTCGGGTGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: VSDLVTDGCEPPCGC*DLNFGPSEEQSGAL Trigger: AAGAGCACCCGACTGCTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR GCA 90 bp | ATCCCAGGAAATGGAGTTTCAGACGGCTGTGAGCTGCCAAATGGATaGAGGAAATGGAATCCAGGTCCTTTGCAGGAGCAGCAAGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: IPGNGVSDGCELPNG*RKWNPGPLQEQQVL Trigger: GAGCACTTGCTGCTCCTGCAAAGGACCTGGATTCCATTTCCTGCATCCATTTGGCAGCTCACAGCCGTCTGAAACTCCATTTCCTGGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR GCA 90 bp | TGCTCTTCAGAGTGCACTTCCTCCCAGTGTGCTTGCTCTTCAGCATaGACTTCCTCCCAGTGTGCTTCCTCTTCAGAGTGTACTTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: CSSECTSSQCACSSA*TSSQCASSSECTSS Trigger: AGAGGAAGTACACTCTGAAGAGGAAGCACACTGGGAGGAAGTGCATGCTGAAGAGCAAGCACACTGGGAGGAAGTGCACTCTGAAGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR TCA 90 bp | TCCTCGTCAATGATACCTGGCCCCTGGCTTTTCGGGCTTCCCTGTTaGAATGGCCTGAACAGAAATAAGGTTGCCATGGAACCAGGATTG | + |
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Preference number: 1 (lower is better) Translates to: SSSMIPGPWLFGLPC*NGLNRNKVAMEPGL Trigger: CAATCCTGGTTCCATGGCAACCTTATTTCTGTTCAGGCCATTTCAACAGGGAAGCCCGAAAAGCCAGGGGCCAGGTATCATTGACGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR GCA 90 bp | CATGGGCCTCCTCACCTTTGTTCTTCGGAATGCTTGAATGCCGTATaGGTACCATTTGTGTCTGGTGCCCAGGAGGCCAAATGTCTGAAT | + |
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Preference number: 1 (lower is better) Translates to: HGPPHLCSSECLNAV*VPFVSGAQEAKCLN Trigger: ATTCAGACATTTGGCCTCCTGGGCACCAGACACAAATGGTACGCATACGGCATTCAAGCATTCCGAAGAACAAAGGTGAGGAGGCCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR GCA 90 bp | ACTTCCTCCCAGTGTGCTTGCTCTTCAGAGTCCACTTCCTCCCAGTaGACTTCCTCTCACTGTACTTTCTCTTCAGAGTCCAATTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: TSSQCACSSESTSSQ*TSSHCTFSSESNSS Trigger: GGAGGAATTGGACTCTGAAGAGAAAGTACAGTGAGAGGAAGTGCACTGGGAGGAAGTGGACTCTGAAGAGCAAGCACACTGGGAGGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR CCA 90 bp | TGGCCCTCAAGCTCAGAGATAGACCTTTCTTGGACTCCTGAGTGCTaGAGTAAAGGCCTTGGACACCATGCCCATTGTGATCTTTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: WPSSSEIDLSWTPEC*SKGLGHHAHCDLSF Trigger: GAAGGAAAGATCACAATGGGCATGGTGTCCAAGGCCTTTACTCCAGCACTCAGGAGTCCAAGAAAGGTCTATCTCTGAGCTTGAGGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR TCA 90 bp | ATGGAATCCAGGTCCTTTGCAGGAGCAGCAAGTGCTCTGAACTGCTaGGCTGCCCCTCCAACCCAGCCTTTTTACCTTAATCTTACTCAT | + |
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Preference number: 1 (lower is better) Translates to: MESRSFAGAASALNC*AAPPTQPFYLNLTH Trigger: ATGAGTAAGATTAAGGTAAAAAGGCTGGGTTGGAGGGGCAGCTCAGCAGTTCAGAGCACTTGCTGCTCCTGCAAAGGACCTGGATTCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR GCA 90 bp | CCCACCGCTGTTTACAGCCTTTTTACTACCTCGTCTTCCTTTCTCTaGACTGGGACACCAGTGAGGCTAACTTCTAATGTCTGCCTCTCA | + |
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Preference number: 1 (lower is better) Translates to: PTAVYSLFTTSSSFL*TGTPVRLTSNVCLS Trigger: TGAGAGGCAGACATTAGAAGTTAGCCTCACTGGTGTCCCAGTGCAGAGAAAGGAAGACGAGGTAGTAAAAAGGCTGTAAACAGCGGTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR GCA 90 bp | TGGTTGCTGGGATTTGAACTTCGGACCTTCGGAAGAGCAGTCGGGTaGTCTTACCCACTGAGCCATCTCACCAGCCCTAAAGATTTATTT | + |
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Preference number: 1 (lower is better) Translates to: WLLGFELRTFGRAVG*SYPLSHLTSPKDLF Trigger: AAATAAATCTTTAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR GCA 90 bp | TTCCTCTCACTGTACTTTCTCTTCAGAGTCCAATTCCTCCCAGTGTaGTTGCTCTTCAGAGTGCACTTCCTCCCAGTGTGCTTGCTGTAC | + |
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Preference number: 1 (lower is better) Translates to: FLSLYFLFRVQFLPV*LLFRVHFLPVCLLY Trigger: GTACAGCAAGCACACTGGGAGGAAGTGCACTCTGAAGAGCAAGCACACTGGGAGGAATTGGACTCTGAAGAGAAAGTACAGTGAGAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR TCA 90 bp | TCCAAATGTGGTTCAGCTGCCTCTCAACATGAGATCCTTGACAGCTaGCTTCCTTCCCACCGCTGTTTACAGCCTTTTTACTACCTCGTC | + |
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Preference number: 1 (lower is better) Translates to: SKCGSAASQHEILDS*LPSHRCLQPFYYLV Trigger: GACGAGGTAGTAAAAAGGCTGTAAACAGCGGTGGGAAGGAAGTCAGCTGTCAAGGATCTCATGTTGAGAGGCAGCTGAACCACATTTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR GCA 90 bp | CTGATGCTCTTGCTTCCAACCTCTAGGACTGGGATTACAGGAATGTaGTACCATGCCCATTTTTCTTTGGGCAGTGCTGGAGATAGCATG | + |
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Preference number: 1 (lower is better) Translates to: LMLLLPTSRTGITGM*YHAHFSLGSAGDSM Trigger: CATGCTATCTCCAGCACTGCCCAAAGAAAAATGGGCATGGTAGCACATTCCTGTAATCCCAGTCCTAGAGGTTGGAAGCAAGAGCATCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| 3UTR GCA 90 bp | TTCTTCGGAATGCTTGAATGCCGTATGCGTACCATTTGTGTCTGGTaGCCAGGAGGCCAAATGTCTGAATCCCAGGAAATGGAGTTTCAG | + |
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Preference number: 1 (lower is better) Translates to: FFGMLECRMRTICVW*PGGQMSESQEMEFQ Trigger: CTGAAACTCCATTTCCTGGGATTCAGACATTTGGCCTCCTGGGCACCAGACACAAATGGTACGCATACGGCATTCAAGCATTCCGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR TCA 90 bp | TGTGCATGTGTGTGGGGAAAAGGACAGCTTGCAGGAGTTCAGACCTaGGAACTGAACTCACGCTATCAGAATTGGCAGCAAGCATCTTTA | + |
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Preference number: 1 (lower is better) Translates to: CACVWGKGQLAGVQT*ELNSRYQNWQQASL Trigger: TAAAGATGCTTGCTGCCAATTCTGATAGCGTGAGTTCAGTTCTCAGGTCTGAACTCCTGCAAGCTGTCCTTTTCCCCACACACATGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| 3UTR TCA 90 bp | CCTTGCTCCTCAGTCCCCACTCTTTCTCTTGCAGACCCTATTGACTaGCCCACGGACTGGGTCACACATCATATTAAACAGTCATTCTTT | + |
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Preference number: 1 (lower is better) Translates to: PCSSVPTLSLADPID*PTDWVTHHIKQSFF Trigger: AAAGAATGACTGTTTAATATGATGTGTGACCCAGTCCGTGGGTCAGTCAATAGGGTCTGCAAGAGAAAGAGTGGGGACTGAGGAGCAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR GCA 90 bp | TCTCACTGTACTTTCTCTTCAGAGTCCAATTCCTCCCAGTGTGCTTaGTCTTCAGAGTGCACTTCCTCCCAGTGTGCTTGCTGTACTTTT | + |
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Preference number: 1 (lower is better) Translates to: SHCTFSSESNSSQCA*SSECTSSQCACCTF Trigger: AAAAGTACAGCAAGCACACTGGGAGGAAGTGCACTCTGAAGAGCAAGCACACTGGGAGGAATTGGACTCTGAAGAGAAAGTACAGTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR CCA 90 bp | TTGTTCTTCGGAATGCTTGAATGCCGTATGCGTACCATTTGTGTCTaGTGCCCAGGAGGCCAAATGTCTGAATCCCAGGAAATGGAGTTT | + |
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Preference number: 1 (lower is better) Translates to: LFFGMLECRMRTICV*CPGGQMSESQEMEF Trigger: AAACTCCATTTCCTGGGATTCAGACATTTGGCCTCCTGGGCACCAGACACAAATGGTACGCATACGGCATTCAAGCATTCCGAAGAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR TCA 90 bp | GCTGCCTTTAAGCTCACTATACAGCAGAGGGTGACCTTGAATTTCTaGTGCTCTTGCTTCCAACCTCTAGGACTGGGATTACAGGAATGT | + |
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Preference number: 1 (lower is better) Translates to: AAFKLTIQQRVTLNF*CSCFQPLGLGLQEC Trigger: ACATTCCTGTAATCCCAGTCCTAGAGGTTGGAAGCAAGAGCATCAGAAATTCAAGGTCACCCTCTGCTGTATAGTGAGCTTAAAGGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| 3UTR GCA 90 bp | TTCTCTTCAGAGTCCAATTCCTCCCAGTGTGCTTGCTCTTCAGAGTaGACTTCCTCCCAGTGTGCTTGCTGTACTTTTGTGTTTATCACA | + |
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Preference number: 1 (lower is better) Translates to: FSSESNSSQCACSSE*TSSQCACCTFVFIT Trigger: TGTGATAAACACAAAAGTACAGCAAGCACACTGGGAGGAAGTGCACTCTGAAGAGCAAGCACACTGGGAGGAATTGGACTCTGAAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR CCA 90 bp | TATCCATTGATTTCTTTCTTATGGAGACAGAGACTCAGGGAACCATaGCTGGCTGCCTTTAAGCTCACTATACAGCAGAGGGTGACCTTG | + |
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Preference number: 1 (lower is better) Translates to: YPLISFLWRQRLREP*LAAFKLTIQQRVTL Trigger: CAAGGTCACCCTCTGCTGTATAGTGAGCTTAAAGGCAGCCAGCCATGGTTCCCTGAGTCTCTGTCTCCATAAGAAAGAAATCAATGGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| 3UTR CCA 90 bp | CCAGTTTCAGATGCCACACCCTTTCTTCCATTTGTCTTTGATACATaGGCCTCCTCACCTTTGTTCTTCGGAATGCTTGAATGCCGTATG | + |
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Preference number: 1 (lower is better) Translates to: PVSDATPFLPFVFDT*ASSPLFFGMLECRM Trigger: CATACGGCATTCAAGCATTCCGAAGAACAAAGGTGAGGAGGCCCATGTATCAAAGACAAATGGAAGAAAGGGTGTGGCATCTGAAACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR TCA 90 bp | ATCTCATTACAGATGGTTGTGAGACACCATGTGGTTGCTGGGATTTaGATTCAGGACTGTCAGAAGAGCAGTCCAAACACTCTTAAGCGC | + |
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Preference number: 1 (lower is better) Translates to: ISLQMVVRHHVVAGI*IQDCQKSSPNTLKR Trigger: GCGCTTAAGAGTGTTTGGACTGCTCTTCTGACAGTCCTGAATTCAAATCCCAGCAACCACATGGTGTCTCACAACCATCTGTAATGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR GCA 90 bp | AAGGTATCAGATCTCATTACAGATGGTTGTGAGACACCATGTGGTTaGTGGGATTTGAATTCAGGACTGTCAGAAGAGCAGTCCAAACAC | + |
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Preference number: 1 (lower is better) Translates to: KVSDLITDGCETPCG*WDLNSGLSEEQSKH Trigger: GTGTTTGGACTGCTCTTCTGACAGTCCTGAATTCAAATCCCAGCAACCACATGGTGTCTCACAACCATCTGTAATGAGATCTGATACCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR GCA 90 bp | TGTGCACTTTCTGCTACAAGTTGCTTAGAAAAGCAAGGGTGTGCTTaGTCTTATAAGAGCACTTCCTGCCATAGTGTTCTTCCTCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: CALSATSCLEKQGCA*SYKSTSCHSVLPLQ Trigger: CTGAAGAGGAAGAACACTATGGCAGGAAGTGCTCTTATAAGAGCAAGCACACCCTTGCTTTTCTAAGCAACTTGTAGCAGAAAGTGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR TCA 90 bp | GACAGCATAAATAATCCCTATACTCCAATTTATCCCAGCGATAGGTaGGCAGGTCCAGGTGAACCTCAGAAACAAACTTGTAAAGCCTGT | + |
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Preference number: 1 (lower is better) Translates to: DSINNPYTPIYPSDR*AGPGEPQKQTCKAC Trigger: ACAGGCTTTACAAGTTTGTTTCTGAGGTTCACCTGGACCTGCTCACCTATCGCTGGGATAAATTGGAGTATAGGGATTATTTATGCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR CCA 90 bp | GCATTGACAATGATATCAGAGGATTATCCATTGATTTCTTTCTTATaGAGACAGAGACTCAGGGAACCATGGCTGGCTGCCTTTAAGCTC | + |
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Preference number: 1 (lower is better) Translates to: ALTMISEDYPLISFL*RQRLREPWLAAFKL Trigger: GAGCTTAAAGGCAGCCAGCCATGGTTCCCTGAGTCTCTGTCTCCATAAGAAAGAAATCAATGGATAATCCTCTGATATCATTGTCAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| 3UTR CCA 90 bp | CTAGAGAGTTATTCTATTTCCTTACAGGAAAGCAGGAACAGAGGCTaGCGAAGCTCAGTGGTTAAGACGGAAAATGACGATTTTCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: LESYSISLQESRNRG*RSSVVKTENDDFLH Trigger: ATGCAGAAAATCGTCATTTTCCGTCTTAACCACTGAGCTTCGCCAGCCTCTGTTCCTGCTTTCCTGTAAGGAAATAGAATAACTCTCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR TCA 90 bp | TTCGGTAAGTCACTTTTAAATATGTACAATTTCCCAGTGTCTAATTaGGAGGCTGTCACTGCACCTACAGTTATGCCATCTGACCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: FGKSLLNMYNFPVSN*EAVTAPTVMPSDQR Trigger: CCTCTGGTCAGATGGCATAACTGTAGGTGCAGTGACAGCCTCTCAATTAGACACTGGGAAATTGTACATATTTAAAAGTGACTTACCGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR GCA 90 bp | TTTAAATTTATTTACAGGTTAGTTGTATGCATGCCACAGTATGTGTaGATGTGTGTGGGGAAAAGGACAGCTTGCAGGAGTTCAGACCTG | + |
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Preference number: 1 (lower is better) Translates to: FKFIYRLVVCMPQYV*MCVGKRTACRSSDL Trigger: CAGGTCTGAACTCCTGCAAGCTGTCCTTTTCCCCACACACATGCACACATACTGTGGCATGCATACAACTAACCTGTAAATAAATTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| 3UTR GCA 90 bp | AGCTGCACATATCACTACCCAGTGAGTGCATATATTACCCATAGTTaGCTTTCAATAAATGAGACAGGAGACTTGAACCTTGAGCAGATA | + |
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Preference number: 1 (lower is better) Translates to: SCTYHYPVSAYITHS*LSINETGDLNLEQI Trigger: TATCTGCTCAAGGTTCAAGTCTCCTGTCTCATTTATTGAAAGGCAACTATGGGTAATATATGCACTCACTGGGTAGTGATATGTGCAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR GCA 90 bp | ATTGTCAGTGGCCCTAGTCAATGGAGAGAAGATAGAGACACCACTTaGCTTAGAATAAAAACTATGTGCACTTTCTGCTACAAGTTGCTT | + |
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Preference number: 1 (lower is better) Translates to: IVSGPSQWREDRDTT*LRIKTMCTFCYKLL Trigger: AAGCAACTTGTAGCAGAAAGTGCACATAGTTTTTATTCTAAGGCAAGTGGTGTCTCTATCTTCTCTCCATTGACTAGGGCCACTGACAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR CCA 90 bp | CTGGGCAGTAACCAGGATTTCCTCAGGATATTCCTATTTATAAAATaGATTAACACTCTTCAACCGGTAGGGCTGATCAGGGTGTTTAAA | + |
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Preference number: 1 (lower is better) Translates to: LGSNQDFLRIFLFIK*INTLQPVGLIRVFK Trigger: TTTAAACACCCTGATCAGCCCTACCGGTTGAAGAGTGTTAATCCATTTTATAAATAGGAATATCCTGAGGAAATCCTGGTTACTGCCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGTGCACTTCCTCCCAGTGTGCTTGCTCTTCAGAGTCCACTTCCTCCCAGGTGATACAGAGCCACTaGCCACCCAGATCAGACTGG | + |
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Preference number: 2 (lower is better) Translates to: SECTSSQCACSSESTSSQVIQSH*PPRSDW Trigger: CCAGTCTGATCTGGGTGGCCAGTGGCTCTGTATCAC...CTGGGAGGAAGTGGACTCTGAAGAGCAAGCACACTGGGAGGAAGTGCACTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR CAA 90 bp | GATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTTCGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCAC | + |
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Preference number: 2 (lower is better) Translates to: DLVTDGCEPPCGCWD*NFGPSEEQSGALTH Trigger: GTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR CAA 90 bp | CTCCCAGTGTGCTTGCTCTTCAGAGTGCACTTCCTCCCAGTGTGCTaGCTCTTCAGCATGCACTTCCTCCCAGTGTGCTTCCTCTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: LPVCLLFRVHFLPVC*LFSMHFLPVCFLFR Trigger: TCTGAAGAGGAAGCACACTGGGAGGAAGTGCATGCTGAAGAGCAAGCACACTGGGAGGAAGTGCACTCTGAAGAGCAAGCACACTGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR TCA 90 bp | GCACTTCCTCCCAGTGTGCTTGCTCTTCAGAGTCCACTTCCTCCCAGTGCACTTAGGAGGCCAAATGTCTaGATCCCAGGAAATGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: ALPPSVLALQSPLPPSALRRPNV*IPGNGV Trigger: AACTCCATTTCCTGGGATTCAGACATTTGGCCTCCT...AAGTGCACTGGGAGGAAGTGGACTCTGAAGAGCAAGCACACTGGGAGGAAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR TCA 90 bp | TCAGAGTGCACTTCCTCCCAGTGTGCTTGCTCTTCAGAGTCCACTTCCTCCCAGGTGGTTGCTGGGATTTaGATTCAGGACTGTCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: SECTSSQCACSSESTSSQVVAGI*IQDCQK Trigger: CTTCTGACAGTCCTGAATTCAAATCCCAGCAACCAC...CTGGGAGGAAGTGGACTCTGAAGAGCAAGCACACTGGGAGGAAGTGCACTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR CAA 90 bp | TCTCTCTGTTTATCCCTGGCTGTCCTGAAACTCACCAGGCTATCCTaGAACCCACAGACATCCACCTGCTTCCCAGGTGCTGGCATTAAA | + |
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Preference number: 2 (lower is better) Translates to: SLCLSLAVLKLTRLS*NPQTSTCFPGAGIK Trigger: TTTAATGCCAGCACCTGGGAAGCAGGTGGATGTCTGTGGGTTCAAGGATAGCCTGGTGAGTTTCAGGACAGCCAGGGATAAACAGAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| 3UTR CAA 90 bp | TCTCCATTCTTCAAGTCCCTTGCTCCTCAGTCCCCACTCTTTCTCTaGCAGACCCTATTGACTGACCCACGGACTGGGTCACACATCATA | + |
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Preference number: 2 (lower is better) Translates to: SPFFKSLAPQSPLFL*QTLLTDPRTGSHII Trigger: TATGATGTGTGACCCAGTCCGTGGGTCAGTCAATAGGGTCTGCAAGAGAAAGAGTGGGGACTGAGGAGCAAGGGACTTGAAGAATGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR TCA 90 bp | GCACTTCCTCCCAGTGTGCTTGCTCTTCAGAGTCCACTTCCTCCCAGTGCACTTGCCTTGTCTACAAAGTaGGTTTCAGGACAGAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: ALPPSVLALQSPLPPSALALSTK*VSGQRN Trigger: GTTTCTCTGTCCTGAAACTCACTTTGTAGACAAGGC...AAGTGCACTGGGAGGAAGTGGACTCTGAAGAGCAAGCACACTGGGAGGAAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR GCA 90 bp | AGAGACTCAGGGAACCATGGCTGGCTGCCTTTAAGCTCACTATACAGCAGAGGGGTGCTGGAGATAGCATaGAGGGCTGTGCACATTTTA | + |
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Preference number: 2 (lower is better) Translates to: RDSGNHGWLPLSSLYSRGVLEIA*RAVHIL Trigger: TAAAATGTGCACAGCCCTGCATGCTATCTCCAGCAC...CCCTCTGCTGTATAGTGAGCTTAAAGGCAGCCAGCCATGGTTCCCTGAGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| 3UTR-3UTR GCA 90 bp | CACATCTGTTGGGAGCCGACTCTTAGCAGAAAGCTGCTATCATCTCTGCAGCCAACCATTTGTGTCTGGTaGCCAGGAGGCCAAATGTCT | + |
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Preference number: 2 (lower is better) Translates to: HICWEPTLSRKLLSSLQPTICVW*PGGQMS Trigger: AGACATTTGGCCTCCTGGGCACCAGACACAAATGGT...TGGCTGCAGAGATGATAGCAGCTTTCTGCTAAGAGTCGGCTCCCAACAGATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGTGCACTTCCTCCCAGTGTGCTTGCTCTTCAGAGTCCACTTCCTCCCAGAATGGATGCAGGAAATaGAATCCAGGTCCTTTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SECTSSQCACSSESTSSQNGCRK*NPGPLQ Trigger: CTGCAAAGGACCTGGATTCCATTTCCTGCATCCATT...CTGGGAGGAAGTGGACTCTGAAGAGCAAGCACACTGGGAGGAAGTGCACTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR GCA 90 bp | CACATCTGTTGGGAGCCGACTCTTAGCAGAAAGCTGCTATCATCTCTGCAGCCAATGCCACAGTATGTGTaGATGTGTGTGGGGAAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: HICWEPTLSRKLLSSLQPMPQYV*MCVGKR Trigger: CCTTTTCCCCACACACATGCACACATACTGTGGCAT...TGGCTGCAGAGATGATAGCAGCTTTCTGCTAAGAGTCGGCTCCCAACAGATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR CAA 90 bp | AAGTCCCTTGCTCCTCAGTCCCCACTCTTTCTCTTGCAGACCCTATaGACTGACCCACGGACTGGGTCACACATCATATTAAACAGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: KSLAPQSPLFLLQTL*TDPRTGSHIILNSH Trigger: ATGACTGTTTAATATGATGTGTGACCCAGTCCGTGGGTCAGTCAATAGGGTCTGCAAGAGAAAGAGTGGGGACTGAGGAGCAAGGGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR CAA 90 bp | TGCTTTGCAGATGGGGAAAGGAAAAGACTGACTGTAGTGGTCTTGTaGAGGACCAGAGTTCAGTTTCCAGCACCCACAACAGGTGACTCA | + |
|
Preference number: 2 (lower is better) Translates to: CFADGERKRLTVVVL*RTRVQFPAPTTGDS Trigger: TGAGTCACCTGTTGTGGGTGCTGGAAACTGAACTCTGGTCCTCAACAAGACCACTACAGTCAGTCTTTTCCTTTCCCCATCTGCAAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR CAA 90 bp | CTCTCACTGTACTTTCTCTTCAGAGTCCAATTCCTCCCAGTGTGCTaGCTCTTCAGAGTGCACTTCCTCCCAGTGTGCTTGCTGTACTTT | + |
|
Preference number: 2 (lower is better) Translates to: LSLYFLFRVQFLPVC*LFRVHFLPVCLLYF Trigger: AAAGTACAGCAAGCACACTGGGAGGAAGTGCACTCTGAAGAGCAAGCACACTGGGAGGAATTGGACTCTGAAGAGAAAGTACAGTGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR TCA 90 bp | GTTATTCTATTTCCTTACAGGAAAGCAGGAACAGAGGCTGGCGAAGCTCAGTGGCTGGCATTAAAGATGTaGACCATCACTGCCCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: VILFPYRKAGTEAGEAQWLALKM*TITALL Trigger: CAGCAGGGCAGTGATGGTTCACATCTTTAATGCCAG...CCACTGAGCTTCGCCAGCCTCTGTTCCTGCTTTCCTGTAAGGAAATAGAATAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR TCA 90 bp | GACATATATAAGGACAGACAGACAGACAAACAGACACACACACACTTTCACACAGAGCAGCAAGTGCTCTaGACTGCTGAGCTGCCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: DIYKDRQTDKQTHTHFHTEQQVL*TAELPL Trigger: GAGGGGCAGCTCAGCAGTTCAGAGCACTTGCTGCTC...TGTGTGAAAGTGTGTGTGTGTCTGTTTGTCTGTCTGTCTGTCCTTATATATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR TCA 90 bp | GTTATTCTATTTCCTTACAGGAAAGCAGGAACAGAGGCTGGCGAAGCTCAGTGGTTCCCAGTGTCTAATTaGGAGGCTGTCACTGCACCT | + |
|
Preference number: 2 (lower is better) Translates to: VILFPYRKAGTEAGEAQWFPVSN*EAVTAP Trigger: AGGTGCAGTGACAGCCTCTCAATTAGACACTGGGAA...CCACTGAGCTTCGCCAGCCTCTGTTCCTGCTTTCCTGTAAGGAAATAGAATAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR GCA 90 bp | GTTATTCTATTTCCTTACAGGAAAGCAGGAACAGAGGCTGGCGAAGCTCAGTGGGGGAAAAGGACAGCTTaGAGGAGTTCAGACCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: VILFPYRKAGTEAGEAQWGKRTA*RSSDLR Trigger: TCTCAGGTCTGAACTCCTGCAAGCTGTCCTTTTCCC...CCACTGAGCTTCGCCAGCCTCTGTTCCTGCTTTCCTGTAAGGAAATAGAATAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR GCA 90 bp | CCACTATTCTGTTATGGAACACAAAACTGCAGTCCATGCACAATTCCACAGAGCTCTGAACTGCTGAGCTaGCCCTCCAACCCAGCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: PLFCYGTQNCSPCTIPQSSELLS*PSNPAF Trigger: AAAGGCTGGGTTGGAGGGGCAGCTCAGCAGTTCAGA...GCTCTGTGGAATTGTGCATGGACTGCAGTTTTGTGTTCCATAACAGAATAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTCCCAGTGTGCTTCCTCTTCAGAGTGTACTTCCTCTCACTGTACTTTCTCTCCACTTCCTCCCAGTaGACTTCCTCTCACTGTACT | + |
|
Preference number: 2 (lower is better) Translates to: FLPVCFLFRVYFLSLYFLSTSSQ*TSSHCT Trigger: AGTACAGTGAGAGGAAGTGCACTGGGAGGAAGTGGA...GAGAAAGTACAGTGAGAGGAAGTACACTCTGAAGAGGAAGCACACTGGGAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR CCA 90 bp | ACTGACCCACGGACTGGGTCACACATCATATTAAACAGTCATTCTTTCCCTAGATGCCTCTCCCTCAGTTaGAAACAACCTGCCCCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: TDPRTGSHIILNSHSFPRCLSLS*KQPAPS Trigger: AGAGGGGGCAGGTTGTTTCCAACTGAGGGAGAGGCA...TCTAGGGAAAGAATGACTGTTTAATATGATGTGTGACCCAGTCCGTGGGTCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR TCA 90 bp | ATGTGTGTGGGGAAAAGGACAGCTTGCAGGAGTTCAGACCTGAGAACTGAACTCGTGACCTTGAATTTCTaGTGCTCTTGCTTCCAACCT | + |
|
Preference number: 2 (lower is better) Translates to: MCVGKRTACRSSDLRTELVTLNF*CSCFQP Trigger: AGGTTGGAAGCAAGAGCATCAGAAATTCAAGGTCAC...GAGTTCAGTTCTCAGGTCTGAACTCCTGCAAGCTGTCCTTTTCCCCACACACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| 3UTR-3UTR TCA 90 bp | GACCCACGGACTGGGTCACACATCATATTAAACAGTCATTCTTTCCCTAGAGCCTCTTCCATTTGTCTTTaGTACATGGGCCTCCTCACC | + |
|
Preference number: 2 (lower is better) Translates to: DPRTGSHIILNSHSFPRASSICL*YMGLLT Trigger: GGTGAGGAGGCCCATGTATCAAAGACAAATGGAAGA...GGCTCTAGGGAAAGAATGACTGTTTAATATGATGTGTGACCCAGTCCGTGGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR TCA 90 bp | GTTATTCTATTTCCTTACAGGAAAGCAGGAACAGAGGCTGGCGAAGCTCAGTGGAGGAGACTTGAACCTTaGGCAGATAGCCTGTGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: VILFPYRKAGTEAGEAQWRRLEP*ADSLCC Trigger: ACAACACAGGCTATCTGCTCAAGGTTCAAGTCTCCT...CCACTGAGCTTCGCCAGCCTCTGTTCCTGCTTTCCTGTAAGGAAATAGAATAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR GCA 90 bp | CACATCTGTTGGGAGCCGACTCTTAGCAGAAAGCTGCTATCATCTCTGCAGCCATACAGGTTAGTTGTATaGATGCCACAGTATGTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: HICWEPTLSRKLLSSLQPYRLVV*MPQYVC Trigger: GCACACATACTGTGGCATGCATACAACTAACCTGTA...TGGCTGCAGAGATGATAGCAGCTTTCTGCTAAGAGTCGGCTCCCAACAGATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR GCA 90 bp | TTCCTCCCAGTGTGCTTCCTCTTCAGAGTGTACTTCCTCTCACTGTACTTTCTCGAGCTGCCAAATGGATaGAGGAAATGGAATCCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: FLPVCFLFRVYFLSLYFLELPNG*RKWNPG Trigger: ACCTGGATTCCATTTCCTGCATCCATTTGGCAGCTC...GAGAAAGTACAGTGAGAGGAAGTACACTCTGAAGAGGAAGCACACTGGGAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR CAA 90 bp | ACACCCTTTCTTCCATTTGTCTTTGATACATGGGCCTCCTCACCTTaGTTCTTCGGAATGCTTGAATGCCGTATGCGTACCATTTGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: TPFLPFVFDTWASSP*FFGMLECRMRTICV Trigger: GACACAAATGGTACGCATACGGCATTCAAGCATTCCGAAGAACAAAGGTGAGGAGGCCCATGTATCAAAGACAAATGGAAGAAAGGGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR CAA 90 bp | GTAAAGGGCCAGTTTCAGATGCCACACCCTTTCTTCCATTTGTCTTaGATACATGGGCCTCCTCACCTTTGTTCTTCGGAATGCTTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: VKGQFQMPHPFFHLS*IHGPPHLCSSECLN Trigger: ATTCAAGCATTCCGAAGAACAAAGGTGAGGAGGCCCATGTATCAAAGACAAATGGAAGAAAGGGTGTGGCATCTGAAACTGGCCCTTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR TCA 90 bp | GTTATTCTATTTCCTTACAGGAAAGCAGGAACAGAGGCTGGCGAAGCTCAGTGGCAGACTCCATTCCTATaGGACAGCATAAATAATCCC | + |
|
Preference number: 2 (lower is better) Translates to: VILFPYRKAGTEAGEAQWQTPFL*DSINNP Trigger: GGGATTATTTATGCTGTCTCATAGGAATGGAGTCTG...CCACTGAGCTTCGCCAGCCTCTGTTCCTGCTTTCCTGTAAGGAAATAGAATAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR GCA 90 bp | CCACTATTCTGTTATGGAACACAAAACTGCAGTCCATGCACAATTCCACAGAGCGAACCATCACTGCCCTaGTGCTCAATGAATGGACAA | + |
|
Preference number: 2 (lower is better) Translates to: PLFCYGTQNCSPCTIPQSEPSLP*CSMNGQ Trigger: TTGTCCATTCATTGAGCAGCAGGGCAGTGATGGTTC...GCTCTGTGGAATTGTGCATGGACTGCAGTTTTGTGTTCCATAACAGAATAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR GCA 90 bp | GTTATTCTATTTCCTTACAGGAAAGCAGGAACAGAGGCTGGCGAAGCTCAGTGGAGTACAGTTCTGCTTTaGAGATGGGGAAAGGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: VILFPYRKAGTEAGEAQWSTVLL*RWGKEK Trigger: CTTTTCCTTTCCCCATCTGCAAAGCAGAACTGTACT...CCACTGAGCTTCGCCAGCCTCTGTTCCTGCTTTCCTGTAAGGAAATAGAATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR GCA 90 bp | GTTATTCTATTTCCTTACAGGAAAGCAGGAACAGAGGCTGGCGAAGCTCAGTGGTCCTCCCAGTGTGCTTaGTGTACTTTTGTGTTTATC | + |
|
Preference number: 2 (lower is better) Translates to: VILFPYRKAGTEAGEAQWSSQCA*CTFVFI Trigger: GATAAACACAAAAGTACAGCAAGCACACTGGGAGGA...CCACTGAGCTTCGCCAGCCTCTGTTCCTGCTTTCCTGTAAGGAAATAGAATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR CCA 90 bp | GTTATTCTATTTCCTTACAGGAAAGCAGGAACAGAGGCTGGCGAAGCTCAGTGGCCTTTAGTCTTGTGTTaGCCTCTTACTTTCCTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: VILFPYRKAGTEAGEAQWPLVLC*PLTFLV Trigger: AACCAGGAAAGTAAGAGGCCAACACAAGACTAAAGG...CCACTGAGCTTCGCCAGCCTCTGTTCCTGCTTTCCTGTAAGGAAATAGAATAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR TCA 90 bp | CCACTATTCTGTTATGGAACACAAAACTGCAGTCCATGCACAATTCCACAGAGCGTGACCTTGAATTTCTaGTGCTCTTGCTTCCAACCT | + |
|
Preference number: 2 (lower is better) Translates to: PLFCYGTQNCSPCTIPQSVTLNF*CSCFQP Trigger: AGGTTGGAAGCAAGAGCATCAGAAATTCAAGGTCAC...GCTCTGTGGAATTGTGCATGGACTGCAGTTTTGTGTTCCATAACAGAATAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR TCA 90 bp | CCACTATTCTGTTATGGAACACAAAACTGCAGTCCATGCACAATTCCACAGAGCTTTTCCAGCTCTACCTaGAACAGAAAGTCCTGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: PLFCYGTQNCSPCTIPQSFSSST*NRKSWQ Trigger: TTGCCAGGACTTTCTGTTTCAGGTAGAGCTGGAAAA...GCTCTGTGGAATTGTGCATGGACTGCAGTTTTGTGTTCCATAACAGAATAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR GCA 90 bp | CCACTATTCTGTTATGGAACACAAAACTGCAGTCCATGCACAATTCCACAGAGCTGCTTGAATGCCGTATaGGTACCATTTGTGTCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: PLFCYGTQNCSPCTIPQSCLNAV*VPFVSG Trigger: ACCAGACACAAATGGTACGCATACGGCATTCAAGCA...GCTCTGTGGAATTGTGCATGGACTGCAGTTTTGTGTTCCATAACAGAATAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR GCA 90 bp | GACCCACGGACTGGGTCACACATCATATTAAACAGTCATTCTTTCCCTAGAGCCCTAACTTCTAATGTCTaGCTCTCACTTTGTGCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: DPRTGSHIILNSHSFPRALTSNV*LSLCAF Trigger: AAAGGCACAAAGTGAGAGGCAGACATTAGAAGTTAG...GGCTCTAGGGAAAGAATGACTGTTTAATATGATGTGTGACCCAGTCCGTGGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR GCA 90 bp | CAGAAAGCTGCTATCATCTCTGCAGCCATCTCGGGCAATTTACTTACATGTGGTTTCCTAGCATGTTTTTaGAAGCCTACCACAGCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: QKAAIISAAISGNLLTCGFLACF*KPTTAV Trigger: TACAGCTGTGGTAGGCTTGCAAAAACATGCTAGGAA...ACCACATGTAAGTAAATTGCCCGAGATGGCTGCAGAGATGATAGCAGCTTTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR CCA 90 bp | GACATATATAAGGACAGACAGACAGACAAACAGACACACACACACTTTCACACATTCCTTTCTCTGCACTaGGACACCAGTGAGGCTAAC | + |
|
Preference number: 2 (lower is better) Translates to: DIYKDRQTDKQTHTHFHTFLSLH*DTSEAN Trigger: GTTAGCCTCACTGGTGTCCCAGTGCAGAGAAAGGAA...TGTGTGAAAGTGTGTGTGTGTCTGTTTGTCTGTCTGTCTGTCCTTATATATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR TCA 90 bp | AAAATGCAGGCCTGCAATATGCTGTTATATTTTTACATGACCCTATATTATGCCTATCCCAGCGATAGGTaGGCAGGTCCAGGTGAACCT | + |
|
Preference number: 2 (lower is better) Translates to: KMQACNMLLYFYMTLYYAYPSDR*AGPGEP Trigger: AGGTTCACCTGGACCTGCTCACCTATCGCTGGGATA...GGCATAATATAGGGTCATGTAAAAATATAACAGCATATTGCAGGCCTGCATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR GCA 90 bp | ATGAAGCCAATCCTACTCAAGTCCCAAGCCTTTTGCTTCTACTTCTTAAATGCTGTGCTGGAGATAGCATaGAGGGCTGTGCACATTTTA | + |
|
Preference number: 2 (lower is better) Translates to: MKPILLKSQAFCFYFLNAVLEIA*RAVHIL Trigger: TAAAATGTGCACAGCCCTGCATGCTATCTCCAGCAC...AGCATTTAAGAAGTAGAAGCAAAAGGCTTGGGACTTGAGTAGGATTGGCTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| 3UTR-3UTR CCA 90 bp | GACATATATAAGGACAGACAGACAGACAAACAGACACACACACACTTTCACACATCACCTGTCCAAATGTaGTTCAGCTGCCTCTCAACA | + |
|
Preference number: 2 (lower is better) Translates to: DIYKDRQTDKQTHTHFHTSPVQM*FSCLST Trigger: TGTTGAGAGGCAGCTGAACCACATTTGGACAGGTGA...TGTGTGAAAGTGTGTGTGTGTCTGTTTGTCTGTCTGTCTGTCCTTATATATGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR CCA 90 bp | TTCCTCCCAGTGTGCTTCCTCTTCAGAGTGTACTTCCTCTCACTGTACTTTCTCCTGAAATTAAGACTCTaGGGGTTTTTGTTGCTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: FLPVCFLFRVYFLSLYFLLKLRL*GFLLLL Trigger: TAACAGCAACAAAAACCCCCAGAGTCTTAATTTCAG...GAGAAAGTACAGTGAGAGGAAGTACACTCTGAAGAGGAAGCACACTGGGAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR TCA 90 bp | ACTGACCCACGGACTGGGTCACACATCATATTAAACAGTCATTCTTTCCCTAGATTCATTTTCTTTATTTaGGACCGAGTCTCATCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: TDPRTGSHIILNSHSFPRFIFFI*DRVSSC Trigger: GCAGGATGAGACTCGGTCTCAAATAAAGAAAATGAA...TCTAGGGAAAGAATGACTGTTTAATATGATGTGTGACCCAGTCCGTGGGTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR-3UTR GCA 90 bp | GAACCATCACTGCCCTGCTGCTCAATGAATGGACAAATTAACATCTACATTGTTAGGAATGTGCTACCATaGCCATTTTTCTTTGGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: EPSLPCCSMNGQINIYIVRNVLP*PFFFGQ Trigger: CTGCCCAAAGAAAAATGGGCATGGTAGCACATTCCT...AACAATGTAGATGTTAATTTGTCCATTCATTGAGCAGCAGGGCAGTGATGGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| 3UTR-3UTR GCA 90 bp | AAAATGCAGGCCTGCAATATGCTGTTATATTTTTACATGACCCTATATTATGCCCAGTTGGAAACAACCTaGCCCCTCTTTCACCTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: KMQACNMLLYFYMTLYYAQLETT*PLFHLS Trigger: GGACAGGTGAAAGAGGGGGCAGGTTGTTTCCAACTG...GGCATAATATAGGGTCATGTAAAAATATAACAGCATATTGCAGGCCTGCATTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR GCA 90 bp | GACATATATAAGGACAGACAGACAGACAAACAGACACACACACACTTTCACACACTGCACCTACAGTTATaGCATCTGACCAGAGGATAT | + |
|
Preference number: 2 (lower is better) Translates to: DIYKDRQTDKQTHTHFHTLHLQL*HLTRGY Trigger: ATATCCTCTGGTCAGATGGCATAACTGTAGGTGCAG...TGTGTGAAAGTGTGTGTGTGTCTGTTTGTCTGTCTGTCTGTCCTTATATATGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR TCA 90 bp | ACTGACCCACGGACTGGGTCACACATCATATTAAACAGTCATTCTTTCCCTAGACAGAGGATTATCCATTaGTTTCTTTCTTATGGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: TDPRTGSHIILNSHSFPRQRIIH*FLSYGD Trigger: GTCTCCATAAGAAAGAAATCAATGGATAATCCTCTG...TCTAGGGAAAGAATGACTGTTTAATATGATGTGTGACCCAGTCCGTGGGTCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR GCA 90 bp | ATGATATCAGAGGATTATCCATTGATTTCTTTCTTATGGAGACAGAGACTCAGGAGGAATGTGCTACCATaGCCATTTTTCTTTGGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: MISEDYPLISFLWRQRLRRNVLP*PFFFGQ Trigger: CTGCCCAAAGAAAAATGGGCATGGTAGCACATTCCT...CCTGAGTCTCTGTCTCCATAAGAAAGAAATCAATGGATAATCCTCTGATATCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAATGCAGGCCTGCAATATGCTGTTATATTTTTACATGACCCTATATTATGCCACTTTCTCTTCAGAGTaGACTTCCTCCCAGTGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: KMQACNMLLYFYMTLYYATFSSE*TSSQCA Trigger: AGCACACTGGGAGGAAGTGCACTCTGAAGAGAAAGT...GGCATAATATAGGGTCATGTAAAAATATAACAGCATATTGCAGGCCTGCATTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR CCA 90 bp | ATGATATCAGAGGATTATCCATTGATTTCTTTCTTATGGAGACAGAGACTCAGGATGCCCATTTTTCTTTaGGCAGTGCTGGAGATAGCA | + |
|
Preference number: 2 (lower is better) Translates to: MISEDYPLISFLWRQRLRMPIFL*AVLEIA Trigger: TGCTATCTCCAGCACTGCCCAAAGAAAAATGGGCAT...CCTGAGTCTCTGTCTCCATAAGAAAGAAATCAATGGATAATCCTCTGATATCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| 3UTR-3UTR CCA 90 bp | GACATATATAAGGACAGACAGACAGACAAACAGACACACACACACTTTCACACACGAAGGAGAAAAGTTTaGCAGATTAAGAGGCTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: DIYKDRQTDKQTHTHFHTRRRKV*QIKRLR Trigger: TCTAAGCCTCTTAATCTGCCAAACTTTTCTCCTTCG...TGTGTGAAAGTGTGTGTGTGTCTGTTTGTCTGTCTGTCTGTCCTTATATATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR CCA 90 bp | CCACTATTCTGTTATGGAACACAAAACTGCAGTCCATGCACAATTCCACAGAGCAAGCATGTTAAAAGATaGCTAGATCCTTTAGTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: PLFCYGTQNCSPCTIPQSKHVKR*LDPLVL Trigger: CAAGACTAAAGGATCTAGCCATCTTTTAACATGCTT...GCTCTGTGGAATTGTGCATGGACTGCAGTTTTGTGTTCCATAACAGAATAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR TCA 90 bp | AAAATGCAGGCCTGCAATATGCTGTTATATTTTTACATGACCCTATATTATGCCAGCATCTTTAGTCACTaGGCCATTTTGATGACCCTC | + |
|
Preference number: 2 (lower is better) Translates to: KMQACNMLLYFYMTLYYASIFSH*AILMTL Trigger: GAGGGTCATCAAAATGGCTCAGTGACTAAAGATGCT...GGCATAATATAGGGTCATGTAAAAATATAACAGCATATTGCAGGCCTGCATTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR CCA 90 bp | GAACCATCACTGCCCTGCTGCTCAATGAATGGACAAATTAACATCTACATTGTTTTGATTTCTTTCTTATaGAGACAGAGACTCAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: EPSLPCCSMNGQINIYIVLISFL*RQRLRE Trigger: TTCCCTGAGTCTCTGTCTCCATAAGAAAGAAATCAA...AACAATGTAGATGTTAATTTGTCCATTCATTGAGCAGCAGGGCAGTGATGGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAATGCAGGCCTGCAATATGCTGTTATATTTTTACATGACCCTATATTATGCCTTGATTTCTTTCTTATaGAGACAGAGACTCAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: KMQACNMLLYFYMTLYYALISFL*RQRLRE Trigger: TTCCCTGAGTCTCTGTCTCCATAAGAAAGAAATCAA...GGCATAATATAGGGTCATGTAAAAATATAACAGCATATTGCAGGCCTGCATTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR TCA 72 bp | CGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTTCGGACCTTCGGAAGAGCAGTCGGGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RMVVSHHVVAGI*TSDLRKSSRVL Trigger: GAGCACCCGACTGCTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR CAA 90 bp | GCACTTCCTCCCAGTGTGCTTGCTCTTCAGAGTCCACTTCCTCCCAGTGCACTTCTCACCAGGCTATCCTaGAACCCACAGACATCCACC | + |
|
Preference number: 3 (lower is better) Translates to: ALPPSVLALQSPLPPSALLTRLS*NPQTST Trigger: GGTGGATGTCTGTGGGTTCAAGGATAGCCTGGTGAG...AAGTGCACTGGGAGGAAGTGGACTCTGAAGAGCAAGCACACTGGGAGGAAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR CAA 90 bp | GCACTTCCTCCCAGTGTGCTTGCTCTTCAGAGTCCACTTCCTCCCAGTGCACTTATGAGCAAGGCAGAGTaGGGTGTGGTGGTGTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: ALPPSVLALQSPLPPSALMSKAE*GVVVCT Trigger: TGTGCACACCACCACACCCAACTCTGCCTTGCTCAT...AAGTGCACTGGGAGGAAGTGGACTCTGAAGAGCAAGCACACTGGGAGGAAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | GCTTGCTCTTCAGAGTGCACTTCCTCCCAGTGTGCTTaGTCTTCAGCATGCACTTCCTCCCAGTGTGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: ACSSECTSSQCA*SSACTSSQCAS Trigger: GGAAGCACACTGGGAGGAAGTGCATGCTGAAGAGCAAGCACACTGGGAGGAAGTGCACTCTGAAGAGCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | GTGTGCTTGCTCTTCAGAGTGCACTTCCTCCCAGTGTaGTTGCTCTTCAGCATGCACTTCCTCCCAGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: VCLLFRVHFLPV*LLFSMHFLPVC Trigger: GCACACTGGGAGGAAGTGCATGCTGAAGAGCAAGCACACTGGGAGGAAGTGCACTCTGAAGAGCAAGCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | GAGTGCACTTCCTCCCAGTGTGCTTGCTCTTCAGAGTaGACTTCCTCCCAGTGTGCTTGCTCTTCAGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: ECTSSQCACSSE*TSSQCACSSAC Trigger: GCATGCTGAAGAGCAAGCACACTGGGAGGAAGTGCACTCTGAAGAGCAAGCACACTGGGAGGAAGTGCACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | GAGTGCACTTCCTCCCAGTGTGCTTGCTCTTCAGCATaGACTTCCTCCCAGTGTGCTTCCTCTTCAGAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: ECTSSQCACSSA*TSSQCASSSEC Trigger: ACACTCTGAAGAGGAAGCACACTGGGAGGAAGTGCATGCTGAAGAGCAAGCACACTGGGAGGAAGTGCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR CCA 72 bp | CTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTTCGGACCTTCGGAAGAGCAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: LVTDGCEPPCGC*DLNFGPSEEQS Trigger: CGACTGCTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR CAA 90 bp | GACCCACGGACTGGGTCACACATCATATTAAACAGTCATTCTTTCCCTAGAGCCGTGCCTCTCCCTCAGTaGGAAACAACCTGCCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: DPRTGSHIILNSHSFPRAVPLPQ*ETTCPL Trigger: GAGGGGGCAGGTTGTTTCCAACTGAGGGAGAGGCAC...GGCTCTAGGGAAAGAATGACTGTTTAATATGATGTGTGACCCAGTCCGTGGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR TCA 72 bp | CCAGAAGAGGGTGTCAGATCTCGTTACGGATGGTTGTaGGCCACCATGTGGTTGCTGGGATTTGAACTTCGG | + |
|
Preference number: 3 (lower is better) Translates to: PEEGVRSRYGWL*ATMWLLGFELR Trigger: CCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTGACACCCTCTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | TGCCAAATGGATGCAGGAAATGGAATCCAGGTCCTTTaGAGGAGCAGCAAGTGCTCTGAACTGCTGAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: CQMDAGNGIQVL*RSSKCSELLSC Trigger: GCAGCTCAGCAGTTCAGAGCACTTGCTGCTCCTGCAAAGGACCTGGATTCCATTTCCTGCATCCATTTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | GATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTTCGGACCTTCGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLVTDGCEPPCG*WDLNFGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | CTGTACTTTCTCTTCAGAGTGCACTTCCTCCCAGTGTaGTTGCTCTTCAGAGTCCACTTCCTCCCAGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LYFLFRVHFLPV*LLFRVHFLPVH Trigger: GTGCACTGGGAGGAAGTGGACTCTGAAGAGCAAGCACACTGGGAGGAAGTGCACTCTGAAGAGAAAGTACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAAGCTGCTATCATCTCTGCAGCCATCTCGGGCAATTTACTTACATGTGGTCCGTATGCGTACCATTaGTGTCTGGTGCCCAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: QKAAIISAAISGNLLTCGPYAYH*CLVPRR Trigger: CCTCCTGGGCACCAGACACAAATGGTACGCATACGG...ACCACATGTAAGTAAATTGCCCGAGATGGCTGCAGAGATGATAGCAGCTTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR TCA 72 bp | CATCCACCTGCTTCCCAGGTGCTGGCATTAAAGATGTaGACCATCACTGCCCTGCTGCTCAATGAATGGACA | + |
|
Preference number: 3 (lower is better) Translates to: HPPASQVLALKM*TITALLLNEWT Trigger: TGTCCATTCATTGAGCAGCAGGGCAGTGATGGTTCACATCTTTAATGCCAGCACCTGGGAAGCAGGTGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| 3UTR GCA 72 bp | AATGGAGTTTCAGACGGCTGTGAGCTGCCAAATGGATaGAGGAAATGGAATCCAGGTCCTTTGCAGGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: NGVSDGCELPNG*RKWNPGPLQEQ Trigger: CTGCTCCTGCAAAGGACCTGGATTCCATTTCCTGCATCCATTTGGCAGCTCACAGCCGTCTGAAACTCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | CCTCACCTTTGTTCTTCGGAATGCTTGAATGCCGTATaGGTACCATTTGTGTCTGGTGCCCAGGAGGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: PHLCSSECLNAV*VPFVSGAQEAK Trigger: TTTGGCCTCCTGGGCACCAGACACAAATGGTACGCATACGGCATTCAAGCATTCCGAAGAACAAAGGTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | ACTTTCTCTTCAGAGTCCAATTCCTCCCAGTGTGCTTaGTCTTCAGAGTGCACTTCCTCCCAGTGTGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: TFSSESNSSQCA*SSECTSSQCAC Trigger: GCAAGCACACTGGGAGGAAGTGCACTCTGAAGAGCAAGCACACTGGGAGGAATTGGACTCTGAAGAGAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | CTGTACTTTCTCTTCAGAGTCCAATTCCTCCCAGTGTaGTTGCTCTTCAGAGTGCACTTCCTCCCAGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LYFLFRVQFLPV*LLFRVHFLPVC Trigger: GCACACTGGGAGGAAGTGCACTCTGAAGAGCAAGCACACTGGGAGGAATTGGACTCTGAAGAGAAAGTACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | CAGTGTGCTTGCTCTTCAGAGTCCACTTCCTCCCAGTaGACTTCCTCTCACTGTACTTTCTCTTCAGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: QCACSSESTSSQ*TSSHCTFSSES Trigger: GGACTCTGAAGAGAAAGTACAGTGAGAGGAAGTGCACTGGGAGGAAGTGGACTCTGAAGAGCAAGCACACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | GTGTGCTTGCTCTTCAGCATGCACTTCCTCCCAGTGTaGTTCCTCTTCAGAGTGTACTTCCTCTCACTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: VCLLFSMHFLPV*FLFRVYFLSLY Trigger: GTACAGTGAGAGGAAGTACACTCTGAAGAGGAAGCACACTGGGAGGAAGTGCATGCTGAAGAGCAAGCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR CCA 72 bp | GGAATGCTTGAATGCCGTATGCGTACCATTTGTGTCTaGTGCCCAGGAGGCCAAATGTCTGAATCCCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GMLECRMRTICV*CPGGQMSESQE Trigger: TTCCTGGGATTCAGACATTTGGCCTCCTGGGCACCAGACACAAATGGTACGCATACGGCATTCAAGCATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGTGTGGGGAAAAGGACAGCTTGCAGGAGTTCAGACCTGAGAACTGAACTCCATGCCCATTTTTCTTaGGGCAGTGCTGGAGATAGC | + |
|
Preference number: 3 (lower is better) Translates to: MCVGKRTACRSSDLRTELHAHFS*GSAGDS Trigger: GCTATCTCCAGCACTGCCCAAAGAAAAATGGGCATG...GAGTTCAGTTCTCAGGTCTGAACTCCTGCAAGCTGTCCTTTTCCCCACACACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGAGTGCACTTCCTCCCAGTGTGCTTGCTCTTCAGAGTCCACTTCCTCCCAGGCCATGGAACCAGGATaGAGATTAAGACTAGGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SECTSSQCACSSESTSSQAMEPG*RLRLGK Trigger: TTTACCTAGTCTTAATCTCAATCCTGGTTCCATGGC...CTGGGAGGAAGTGGACTCTGAAGAGCAAGCACACTGGGAGGAAGTGCACTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR TCA 72 bp | GTGTGGGGAAAAGGACAGCTTGCAGGAGTTCAGACCTaGGAACTGAACTCACGCTATCAGAATTGGCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: VWGKGQLAGVQT*ELNSRYQNWQQ Trigger: TTGCTGCCAATTCTGATAGCGTGAGTTCAGTTCTCAGGTCTGAACTCCTGCAAGCTGTCCTTTTCCCCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| 3UTR TCA 72 bp | TGTCTGAATCCCAGGAAATGGAGTTTCAGACGGCTGTaGGCTGCCAAATGGATGCAGGAAATGGAATCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: CLNPRKWSFRRL*AAKWMQEMESR Trigger: CCTGGATTCCATTTCCTGCATCCATTTGGCAGCTCACAGCCGTCTGAAACTCCATTTCCTGGGATTCAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR TCA 72 bp | ATGATACCTGGCCCCTGGCTTTTCGGGCTTCCCTGTTaGAATGGCCTGAACAGAAATAAGGTTGCCATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: MIPGPWLFGLPC*NGLNRNKVAME Trigger: TTCCATGGCAACCTTATTTCTGTTCAGGCCATTTCAACAGGGAAGCCCGAAAAGCCAGGGGCCAGGTATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR TCA 72 bp | GGTTCAGCTGCCTCTCAACATGAGATCCTTGACAGCTaGCTTCCTTCCCACCGCTGTTTACAGCCTTTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: GSAASQHEILDS*LPSHRCLQPFY Trigger: GTAAAAAGGCTGTAAACAGCGGTGGGAAGGAAGTCAGCTGTCAAGGATCTCATGTTGAGAGGCAGCTGAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | GGGAGCCGACTCTTAGCAGAAAGCTGCTATCATCTCTaGAGCCATCTCGGGCAATTTACTTACATGTGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: GSRLLAESCYHL*SHLGQFTYMWY Trigger: GTACCACATGTAAGTAAATTGCCCGAGATGGCTGCAGAGATGATAGCAGCTTTCTGCTAAGAGTCGGCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | GAGTGTACTTCCTCTCACTGTACTTTCTCTTCAGAGTaGACTTCCTCCCAGTGTGCTTGCTCTTCAGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: ECTSSHCTFSSE*TSSQCACSSES Trigger: GGACTCTGAAGAGCAAGCACACTGGGAGGAAGTGCACTCTGAAGAGAAAGTACAGTGAGAGGAAGTACACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR CCA 72 bp | AGCTCAGAGATAGACCTTTCTTGGACTCCTGAGTGCTaGAGTAAAGGCCTTGGACACCATGCCCATTGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: SSEIDLSWTPEC*SKGLGHHAHCD Trigger: ATCACAATGGGCATGGTGTCCAAGGCCTTTACTCCAGCACTCAGGAGTCCAAGAAAGGTCTATCTCTGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR TCA 72 bp | TCAGTCCCCACTCTTTCTCTTGCAGACCCTATTGACTaGCCCACGGACTGGGTCACACATCATATTAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: SVPTLSLADPID*PTDWVTHHIKQ Trigger: CTGTTTAATATGATGTGTGACCCAGTCCGTGGGTCAGTCAATAGGGTCTGCAAGAGAAAGAGTGGGGACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR TCA 72 bp | GAGGACCAGAGTTCAGTTTCCAGCACCCACAACAGGTaGCTCACAATTACCTGTAACAGACACCAACCATCT | + |
|
Preference number: 3 (lower is better) Translates to: EDQSSVSSTHNR*LTITCNRHQPS Trigger: AGATGGTTGGTGTCTGTTACAGGTAATTGTGAGTCACCTGTTGTGGGTGCTGGAAACTGAACTCTGGTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | ATGCCCATTTTTCTTTGGGCAGTGCTGGAGATAGCATaGAGGGCTGTGCACATTTTAGGCAAGCATTCTACC | + |
|
Preference number: 3 (lower is better) Translates to: MPIFLWAVLEIA*RAVHILGKHST Trigger: GGTAGAATGCTTGCCTAAAATGTGCACAGCCCTGCATGCTATCTCCAGCACTGCCCAAAGAAAAATGGGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACTTCCTCCCAGTGTGCTTGCTCTTCAGAGTCCACTTCCTCCCAGTGCACTTTTTCATTTTCTTTATTaGAGACCGAGTCTCATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: ALPPSVLALQSPLPPSALFHFLY*RPSLIL Trigger: CAGGATGAGACTCGGTCTCAAATAAAGAAAATGAAA...AAGTGCACTGGGAGGAAGTGGACTCTGAAGAGCAAGCACACTGGGAGGAAGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR CAA 90 bp | CCACTATTCTGTTATGGAACACAAAACTGCAGTCCATGCACAATTCCACAGAGCTCCCCACTCTTTCTCTaGCAGACCCTATTGACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: PLFCYGTQNCSPCTIPQSSPLFL*QTLLTD Trigger: GTCAGTCAATAGGGTCTGCAAGAGAAAGAGTGGGGA...GCTCTGTGGAATTGTGCATGGACTGCAGTTTTGTGTTCCATAACAGAATAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR CAA 90 bp | GTTATTCTATTTCCTTACAGGAAAGCAGGAACAGAGGCTGGCGAAGCTCAGTGGGAGTACAGTTCTGCTTaGCAGATGGGGAAAGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VILFPYRKAGTEAGEAQWEYSSA*QMGKGK Trigger: TTTTCCTTTCCCCATCTGCAAAGCAGAACTGTACTC...CCACTGAGCTTCGCCAGCCTCTGTTCCTGCTTTCCTGTAAGGAAATAGAATAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR TCA 72 bp | CAGATGGTTGTGAGACACCATGTGGTTGCTGGGATTTaGATTCAGGACTGTCAGAAGAGCAGTCCAAACACT | + |
|
Preference number: 3 (lower is better) Translates to: QMVVRHHVVAGI*IQDCQKSSPNT Trigger: AGTGTTTGGACTGCTCTTCTGACAGTCCTGAATTCAAATCCCAGCAACCACATGGTGTCTCACAACCATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | GTGTGCTTGCTCTTCAGAGTGCACTTCCTCCCAGTGTaGTTGCTGTACTTTTGTGTTTATCACATCCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: VCLLFRVHFLPV*LLYFCVYHILL Trigger: CAAGAGGATGTGATAAACACAAAAGTACAGCAAGCACACTGGGAGGAAGTGCACTCTGAAGAGCAAGCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR CCA 72 bp | ATTTCTTTCTTATGGAGACAGAGACTCAGGGAACCATaGCTGGCTGCCTTTAAGCTCACTATACAGCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ISFLWRQRLREP*LAAFKLTIQQR Trigger: CCTCTGCTGTATAGTGAGCTTAAAGGCAGCCAGCCATGGTTCCCTGAGTCTCTGTCTCCATAAGAAAGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| 3UTR CCA 72 bp | TACAGGAAAGCAGGAACAGAGGCTGGCGAAGCTCAGTaGTTAAGACGGAAAATGACGATTTTCTGCATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: YRKAGTEAGEAQ*LRRKMTIFCIP Trigger: TGGAATGCAGAAAATCGTCATTTTCCGTCTTAACCACTGAGCTTCGCCAGCCTCTGTTCCTGCTTTCCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR CAA 90 bp | GTTATTCTATTTCCTTACAGGAAAGCAGGAACAGAGGCTGGCGAAGCTCAGTGGCTAGATCCTTTAGTCTaGTGTTGGCCTCTTACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: VILFPYRKAGTEAGEAQWLDPLV*CWPLTF Trigger: GAAAGTAAGAGGCCAACACAAGACTAAAGGATCTAG...CCACTGAGCTTCGCCAGCCTCTGTTCCTGCTTTCCTGTAAGGAAATAGAATAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR CAA 90 bp | CCACTATTCTGTTATGGAACACAAAACTGCAGTCCATGCACAATTCCACAGAGCTGTCTGCCTCTCACTTaGTGCCTTTTCCCTAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: PLFCYGTQNCSPCTIPQSCLPLT*CLFPNN Trigger: GTTGTTAGGGAAAAGGCACAAAGTGAGAGGCAGACA...GCTCTGTGGAATTGTGCATGGACTGCAGTTTTGTGTTCCATAACAGAATAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR CAA 90 bp | CCACTATTCTGTTATGGAACACAAAACTGCAGTCCATGCACAATTCCACAGAGCAATGAGACAGGAGACTaGAACCTTGAGCAGATAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PLFCYGTQNCSPCTIPQSNETGD*NLEQIA Trigger: GGCTATCTGCTCAAGGTTCAAGTCTCCTGTCTCATT...GCTCTGTGGAATTGTGCATGGACTGCAGTTTTGTGTTCCATAACAGAATAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR TCA 72 bp | AAGCTCACTATACAGCAGAGGGTGACCTTGAATTTCTaGTGCTCTTGCTTCCAACCTCTAGGACTGGGATTA | + |
|
Preference number: 3 (lower is better) Translates to: KLTIQQRVTLNF*CSCFQPLGLGL Trigger: TAATCCCAGTCCTAGAGGTTGGAAGCAAGAGCATCAGAAATTCAAGGTCACCCTCTGCTGTATAGTGAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| 3UTR TCA 72 bp | GCCACCTTTGACATTGGCACCACTATAACCACCCACTaGTGGGAAAATGATGAGGGGATATGTGAACTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: ATFDIGTTITTH*WENDEGICELR Trigger: TCTAAGTTCACATATCCCCTCATCATTTTCCCATCAGTGGGTGGTTATAGTGGTGCCAATGTCAAAGGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | GTTTACAGCCTTTTTACTACCTCGTCTTCCTTTCTCTaGACTGGGACACCAGTGAGGCTAACTTCTAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: VYSLFTTSSSFL*TGTPVRLTSNV Trigger: GACATTAGAAGTTAGCCTCACTGGTGTCCCAGTGCAGAGAAAGGAAGACGAGGTAGTAAAAAGGCTGTAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | GATCTCATTACAGATGGTTGTGAGACACCATGTGGTTaGTGGGATTTGAATTCAGGACTGTCAGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLITDGCETPCG*WDLNSGLSEEQ Trigger: CTGCTCTTCTGACAGTCCTGAATTCAAATCCCAGCAACCACATGGTGTCTCACAACCATCTGTAATGAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR CCA 72 bp | GATGCCACACCCTTTCTTCCATTTGTCTTTGATACATaGGCCTCCTCACCTTTGTTCTTCGGAATGCTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: DATPFLPFVFDT*ASSPLFFGMLE Trigger: TTCAAGCATTCCGAAGAACAAAGGTGAGGAGGCCCATGTATCAAAGACAAATGGAAGAAAGGGTGTGGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR CAA 90 bp | GAACCATCACTGCCCTGCTGCTCAATGAATGGACAAATTAACATCTACATTGTTCATGCCCATTTTTCTTaGGGCAGTGCTGGAGATAGC | + |
|
Preference number: 3 (lower is better) Translates to: EPSLPCCSMNGQINIYIVHAHFS*GSAGDS Trigger: GCTATCTCCAGCACTGCCCAAAGAAAAATGGGCATG...AACAATGTAGATGTTAATTTGTCCATTCATTGAGCAGCAGGGCAGTGATGGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGTGTGGGGAAAAGGACAGCTTGCAGGAGTTCAGACCTGAGAACTGAACTCTTTCATTTTCTTTATTaGAGACCGAGTCTCATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: MCVGKRTACRSSDLRTELFHFLY*RPSLIL Trigger: CAGGATGAGACTCGGTCTCAAATAAAGAAAATGAAA...GAGTTCAGTTCTCAGGTCTGAACTCCTGCAAGCTGTCCTTTTCCCCACACACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| 3UTR TCA 72 bp | CTTTATTTGAGACCGAGTCTCATCCTGCTCCTGACTTaGACTAGTTATGAAGCCAATCCTACTCAAGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LYLRPSLILLLT*TSYEANPTQVP Trigger: TGGGACTTGAGTAGGATTGGCTTCATAACTAGTTCAAGTCAGGAGCAGGATGAGACTCGGTCTCAAATAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| 3UTR TCA 72 bp | AGTTTCAGATGCCACACCCTTTCTTCCATTTGTCTTTaGTACATGGGCCTCCTCACCTTTGTTCTTCGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SFRCHTLSSICL*YMGLLTFVLRN Trigger: ATTCCGAAGAACAAAGGTGAGGAGGCCCATGTATCAAAGACAAATGGAAGAAAGGGTGTGGCATCTGAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR TCA 72 bp | CCAGAAGAAGGTATCAGATCTCATTACAGATGGTTGTaGGACACCATGTGGTTGCTGGGATTTGAATTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PEEGIRSHYRWL*DTMWLLGFEFR Trigger: CCTGAATTCAAATCCCAGCAACCACATGGTGTCTCACAACCATCTGTAATGAGATCTGATACCTTCTTCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR CCA 72 bp | CATCTCTGCAGCCATCTCGGGCAATTTACTTACATGTaGTACTTTTCCACTGTGATGAGAGACTTGTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: HLCSHLGQFTYM*YFSTVMRDLFS Trigger: GGAAAACAAGTCTCTCATCACAGTGGAAAAGTACCACATGTAAGTAAATTGCCCGAGATGGCTGCAGAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR CCA 72 bp | TATTCTATTTCCTTACAGGAAAGCAGGAACAGAGGCTaGCGAAGCTCAGTGGTTAAGACGGAAAATGACGAT | + |
|
Preference number: 3 (lower is better) Translates to: YSISLQESRNRG*RSSVVKTENDD Trigger: ATCGTCATTTTCCGTCTTAACCACTGAGCTTCGCCAGCCTCTGTTCCTGCTTTCCTGTAAGGAAATAGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR CAA 90 bp | ACTGACCCACGGACTGGGTCACACATCATATTAAACAGTCATTCTTTCCCTAGACTTCCTGTCTCTGCATaGACAATGATATCAGAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: TDPRTGSHIILNSHSFPRLPVSA*TMISED Trigger: ATCCTCTGATATCATTGTCAATGCAGAGACAGGAAG...TCTAGGGAAAGAATGACTGTTTAATATGATGTGTGACCCAGTCCGTGGGTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR TCA 72 bp | AATAATCCCTATACTCCAATTTATCCCAGCGATAGGTaGGCAGGTCCAGGTGAACCTCAGAAACAAACTTGT | + |
|
Preference number: 3 (lower is better) Translates to: NNPYTPIYPSDR*AGPGEPQKQTC Trigger: ACAAGTTTGTTTCTGAGGTTCACCTGGACCTGCTCACCTATCGCTGGGATAAATTGGAGTATAGGGATTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | CACTGTGATGAGAGACTTGTTTTCCTAGCATGTTTTTaGAAGCCTACCACAGCTGTACACACTCTGATAACA | + |
|
Preference number: 3 (lower is better) Translates to: HCDERLVFLACF*KPTTAVHTLIT Trigger: TGTTATCAGAGTGTGTACAGCTGTGGTAGGCTTGCAAAAACATGCTAGGAAAACAAGTCTCTCATCACAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | TATCACATCCTCTTGATCAAGAGTACAGTTCTGCTTTaGAGATGGGGAAAGGAAAAGACTGACTGTAGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: YHILLIKSTVLL*RWGKEKTDCSG Trigger: ACCACTACAGTCAGTCTTTTCCTTTCCCCATCTGCAAAGCAGAACTGTACTCTTGATCAAGAGGATGTGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | TCTGCTACAAGTTGCTTAGAAAAGCAAGGGTGTGCTTaGTCTTATAAGAGCACTTCCTGCCATAGTGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SATSCLEKQGCA*SYKSTSCHSVL Trigger: AAGAACACTATGGCAGGAAGTGCTCTTATAAGAGCAAGCACACCCTTGCTTTTCTAAGCAACTTGTAGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR CCA 72 bp | ATCCTCTTGATCAAGAGTACAGTTCTGCTTTGCAGATaGGGAAAGGAAAAGACTGACTGTAGTGGTCTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ILLIKSTVLLCR*GKEKTDCSGLV Trigger: AACAAGACCACTACAGTCAGTCTTTTCCTTTCCCCATCTGCAAAGCAGAACTGTACTCTTGATCAAGAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR CAA 90 bp | GACATATATAAGGACAGACAGACAGACAAACAGACACACACACACTTTCACACATTCTTCCATTTGTCTTaGATACATGGGCCTCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: DIYKDRQTDKQTHTHFHTFFHLS*IHGPPH Trigger: GTGAGGAGGCCCATGTATCAAAGACAAATGGAAGAA...TGTGTGAAAGTGTGTGTGTGTCTGTTTGTCTGTCTGTCTGTCCTTATATATGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR CCA 72 bp | TGCCAATTGTTAAAGATTGTCAGTGGCCCTAGTCAATaGAGAGAAGATAGAGACACCACTTGCCTTAGAATA | + |
|
Preference number: 3 (lower is better) Translates to: CQLLKIVSGPSQ*REDRDTTCLRI Trigger: TATTCTAAGGCAAGTGGTGTCTCTATCTTCTCTCCATTGACTAGGGCCACTGACAATCTTTAACAATTGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR-3UTR CAA 90 bp | GAACCATCACTGCCCTGCTGCTCAATGAATGGACAAATTAACATCTACATTGTTCTTCCTGTCTCTGCATaGACAATGATATCAGAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: EPSLPCCSMNGQINIYIVLPVSA*TMISED Trigger: ATCCTCTGATATCATTGTCAATGCAGAGACAGGAAG...AACAATGTAGATGTTAATTTGTCCATTCATTGAGCAGCAGGGCAGTGATGGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGAAGCCAATCCTACTCAAGTCCCAAGCCTTTTGCTTCTACTTCTTAAATGCTCTTCCTGTCTCTGCATaGACAATGATATCAGAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: MKPILLKSQAFCFYFLNALPVSA*TMISED Trigger: ATCCTCTGATATCATTGTCAATGCAGAGACAGGAAG...AGCATTTAAGAAGTAGAAGCAAAAGGCTTGGGACTTGAGTAGGATTGGCTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| 3UTR CCA 72 bp | AACCAGGATTTCCTCAGGATATTCCTATTTATAAAATaGATTAACACTCTTCAACCGGTAGGGCTGATCAGG | + |
|
Preference number: 3 (lower is better) Translates to: NQDFLRIFLFIK*INTLQPVGLIR Trigger: CCTGATCAGCCCTACCGGTTGAAGAGTGTTAATCCATTTTATAAATAGGAATATCCTGAGGAAATCCTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | TATCACTACCCAGTGAGTGCATATATTACCCATAGTTaGCTTTCAATAAATGAGACAGGAGACTTGAACCTT | + |
|
Preference number: 3 (lower is better) Translates to: YHYPVSAYITHS*LSINETGDLNL Trigger: AAGGTTCAAGTCTCCTGTCTCATTTATTGAAAGGCAACTATGGGTAATATATGCACTCACTGGGTAGTGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR GCA 72 bp | AACAAAGTTCCACTATTCTGTTATGGAACACAAAACTaGAGTCCATGCACAATTCCACAGAGCACTAATCTA | + |
|
Preference number: 3 (lower is better) Translates to: NKVPLFCYGTQN*SPCTIPQSTNL Trigger: TAGATTAGTGCTCTGTGGAATTGTGCATGGACTGCAGTTTTGTGTTCCATAACAGAATAGTGGAACTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR TCA 72 bp | AGATCCAGTCTCGATGTATTACAGACTCCATTCCTATaGGACAGCATAAATAATCCCTATACTCCAATTTAT | + |
|
Preference number: 3 (lower is better) Translates to: RSSLDVLQTPFL*DSINNPYTPIY Trigger: ATAAATTGGAGTATAGGGATTATTTATGCTGTCTCATAGGAATGGAGTCTGTAATACATCGAGACTGGATCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| CDS-3UTR TCA 90 bp | AGAGACTCAGGGAACCATGGCTGGCTGCCTTTAAGCTCACTATACAGCAGAGGGCACCCAGCCTGTGTGTaGGGTGAGAGACAGCGACAC | + |
|
Preference number: 4 (lower is better) Translates to: RDSGNHGWLPLSSLYSRGHPACV*GERQRH Trigger: GTGTCGCTGTCTCTCACCTCACACACAGGCTGGGTG...CCCTCTGCTGTATAGTGAGCTTAAAGGCAGCCAGCCATGGTTCCCTGAGTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| CDS-3UTR GCA 90 bp | AGAGACTCAGGGAACCATGGCTGGCTGCCTTTAAGCTCACTATACAGCAGAGGGTCCACACTCCCAGCATaGCCTCGGCAGCAGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RDSGNHGWLPLSSLYSRGSTLPA*PRQQCR Trigger: TCTGCACTGCTGCCGAGGGCATGCTGGGAGTGTGGA...CCCTCTGCTGTATAGTGAGCTTAAAGGCAGCCAGCCATGGTTCCCTGAGTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| 3UTR CAA 72 bp | ACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTTCGGACCTTCGGAAGAGCAGTCGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NFGPSEEQSGA Trigger: AGCACCCGACTGCTCTTCCGAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| CDS-3UTR TCA 90 bp | AGAGACTCAGGGAACCATGGCTGGCTGCCTTTAAGCTCACTATACAGCAGAGGGAGCAGCGGCAGGGATTaGGAAAGGGACATCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RDSGNHGWLPLSSLYSRGSSGRD*ERDIIH Trigger: GTGGATGATGTCCCTTTCTCAATCCCTGCCGCTGCT...CCCTCTGCTGTATAGTGAGCTTAAAGGCAGCCAGCCATGGTTCCCTGAGTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| CDS-3UTR TCA 90 bp | AGAGACTCAGGGAACCATGGCTGGCTGCCTTTAAGCTCACTATACAGCAGAGGGAGCCTGTGTGTGAGGTaGGAGACAGCGACACCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RDSGNHGWLPLSSLYSRGSLCVR*ETATPK Trigger: CTTTGGTGTCGCTGTCTCTCACCTCACACACAGGCT...CCCTCTGCTGTATAGTGAGCTTAAAGGCAGCCAGCCATGGTTCCCTGAGTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| CDS-3UTR GCA 90 bp | GCACTTCCTCCCAGTGTGCTTGCTCTTCAGAGTCCACTTCCTCCCAGTGCACTTTGCCCTCGGCAGCAGTaGAGAGCTTTCACTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALPPSVLALQSPLPPSALCPRQQ*RAFTLF Trigger: GAACAAAGTGAAAGCTCTGCACTGCTGCCGAGGGCA...AAGTGCACTGGGAGGAAGTGGACTCTGAAGAGCAAGCACACTGGGAGGAAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| CDS-3UTR GCA 90 bp | AGAGACTCAGGGAACCATGGCTGGCTGCCTTTAAGCTCACTATACAGCAGAGGGGAGCCCGAGATGAGCTaGTGTTCATGGGTAGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RDSGNHGWLPLSSLYSRGEPEMS*CSWVGD Trigger: GTCTCCTACCCATGAACAGCAGCTCATCTCGGGCTC...CCCTCTGCTGTATAGTGAGCTTAAAGGCAGCCAGCCATGGTTCCCTGAGTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| 3UTR CAA 72 bp | TTATCCCTGGCTGTCCTGAAACTCACCAGGCTATCCTaGAACCCACAGACATCCACCTGCTTCCCAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLAVLKLTRLS*NPQTSTCFPGA Trigger: AGCACCTGGGAAGCAGGTGGATGTCTGTGGGTTCAAGGATAGCCTGGTGAGTTTCAGGACAGCCAGGGATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| 3UTR CAA 72 bp | TTCAAGTCCCTTGCTCCTCAGTCCCCACTCTTTCTCTaGCAGACCCTATTGACTGACCCACGGACTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FKSLAPQSPLFL*QTLLTDPRTGS Trigger: TGACCCAGTCCGTGGGTCAGTCAATAGGGTCTGCAAGAGAAAGAGTGGGGACTGAGGAGCAAGGGACTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| 3UTR CAA 72 bp | TGCTTGCTCTTCAGAGTGCACTTCCTCCCAGTGTGCTaGCTCTTCAGCATGCACTTCCTCCCAGTGTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLLFRVHFLPVC*LFSMHFLPVCF Trigger: GAAGCACACTGGGAGGAAGTGCATGCTGAAGAGCAAGCACACTGGGAGGAAGTGCACTCTGAAGAGCAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| CDS-3UTR TCA 90 bp | CCCATTTTTCTTTGGGCAGTGCTGGAGATAGCATGCAGGGCTGTGCACATTTTACACCCAGCCTGTGTGTaGGGTGAGAGACAGCGACAC | + |
|
Preference number: 4 (lower is better) Translates to: PIFLWAVLEIACRAVHILHPACV*GERQRH Trigger: GTGTCGCTGTCTCTCACCTCACACACAGGCTGGGTG...TAAAATGTGCACAGCCCTGCATGCTATCTCCAGCACTGCCCAAAGAAAAATGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| 3UTR CAA 72 bp | GCAGATAGCCTGTGTTGTCTCCATTCTTCAAGTCCCTaGCTCCTCAGTCCCCACTCTTTCTCTTGCAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: ADSLCCLHSSSP*LLSPHSFSCRP Trigger: GGGTCTGCAAGAGAAAGAGTGGGGACTGAGGAGCAAGGGACTTGAAGAATGGAGACAACACAGGCTATCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| CDS-3UTR GCA 90 bp | ATGTGTGTGGGGAAAAGGACAGCTTGCAGGAGTTCAGACCTGAGAACTGAACTCGAGCCCGAGATGAGCTaGTGTTCATGGGTAGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: MCVGKRTACRSSDLRTELEPEMS*CSWVGD Trigger: GTCTCCTACCCATGAACAGCAGCTCATCTCGGGCTC...GAGTTCAGTTCTCAGGTCTGAACTCCTGCAAGCTGTCCTTTTCCCCACACACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGTGTGGGGAAAAGGACAGCTTGCAGGAGTTCAGACCTGAGAACTGAACTCATGCACTGCTCTGGCTaGGGTGCGGTGTACTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MCVGKRTACRSSDLRTELMHCSG*GAVYFS Trigger: GGAAAAGTACACCGCACCCCAGCCAGAGCAGTGCAT...GAGTTCAGTTCTCAGGTCTGAACTCCTGCAAGCTGTCCTTTTCCCCACACACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| CDS-3UTR TCA 90 bp | CCCATTTTTCTTTGGGCAGTGCTGGAGATAGCATGCAGGGCTGTGCACATTTTAAGCAGCGGCAGGGATTaGGAAAGGGACATCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PIFLWAVLEIACRAVHILSSGRD*ERDIIH Trigger: GTGGATGATGTCCCTTTCTCAATCCCTGCCGCTGCT...TAAAATGTGCACAGCCCTGCATGCTATCTCCAGCACTGCCCAAAGAAAAATGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| CDS-3UTR TCA 90 bp | AGAGACTCAGGGAACCATGGCTGGCTGCCTTTAAGCTCACTATACAGCAGAGGGCCCCTTCAATTGAGCTaGTCCAGTCATCATGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: RDSGNHGWLPLSSLYSRGPLQLS*SSHHGT Trigger: TGTTCCATGATGACTGGATCAGCTCAATTGAAGGGG...CCCTCTGCTGTATAGTGAGCTTAAAGGCAGCCAGCCATGGTTCCCTGAGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| CDS-3UTR TCA 90 bp | GACCCACGGACTGGGTCACACATCATATTAAACAGTCATTCTTTCCCTAGAGCCAGCCTGTGTGTGAGGTaGGAGACAGCGACACCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DPRTGSHIILNSHSFPRASLCVR*ETATPK Trigger: CTTTGGTGTCGCTGTCTCTCACCTCACACACAGGCT...GGCTCTAGGGAAAGAATGACTGTTTAATATGATGTGTGACCCAGTCCGTGGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| CDS-3UTR GCA 90 bp | CCCATTTTTCTTTGGGCAGTGCTGGAGATAGCATGCAGGGCTGTGCACATTTTAGAGCCCGAGATGAGCTaGTGTTCATGGGTAGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PIFLWAVLEIACRAVHILEPEMS*CSWVGD Trigger: GTCTCCTACCCATGAACAGCAGCTCATCTCGGGCTC...TAAAATGTGCACAGCCCTGCATGCTATCTCCAGCACTGCCCAAAGAAAAATGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| CDS-3UTR CCA 90 bp | CCCATTTTTCTTTGGGCAGTGCTGGAGATAGCATGCAGGGCTGTGCACATTTTAATGCACTGCTCTGGCTaGGGTGCGGTGTACTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PIFLWAVLEIACRAVHILMHCSG*GAVYFS Trigger: GGAAAAGTACACCGCACCCCAGCCAGAGCAGTGCAT...TAAAATGTGCACAGCCCTGCATGCTATCTCCAGCACTGCCCAAAGAAAAATGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| 3UTR CAA 72 bp | GCTCCTCAGTCCCCACTCTTTCTCTTGCAGACCCTATaGACTGACCCACGGACTGGGTCACACATCATATTA | + |
|
Preference number: 4 (lower is better) Translates to: APQSPLFLLQTL*TDPRTGSHIIL Trigger: TAATATGATGTGTGACCCAGTCCGTGGGTCAGTCAATAGGGTCTGCAAGAGAAAGAGTGGGGACTGAGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| CDS-3UTR TCA 90 bp | CACATCTGTTGGGAGCCGACTCTTAGCAGAAAGCTGCTATCATCTCTGCAGCCACCCCTTCAATTGAGCTaGTCCAGTCATCATGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: HICWEPTLSRKLLSSLQPPLQLS*SSHHGT Trigger: TGTTCCATGATGACTGGATCAGCTCAATTGAAGGGG...TGGCTGCAGAGATGATAGCAGCTTTCTGCTAAGAGTCGGCTCCCAACAGATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| CDS-3UTR GCA 90 bp | CCCATTTTTCTTTGGGCAGTGCTGGAGATAGCATGCAGGGCTGTGCACATTTTATGCCCTCGGCAGCAGTaGAGAGCTTTCACTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PIFLWAVLEIACRAVHILCPRQQ*RAFTLF Trigger: GAACAAAGTGAAAGCTCTGCACTGCTGCCGAGGGCA...TAAAATGTGCACAGCCCTGCATGCTATCTCCAGCACTGCCCAAAGAAAAATGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| 3UTR CAA 72 bp | TACTTTCTCTTCAGAGTCCAATTCCTCCCAGTGTGCTaGCTCTTCAGAGTGCACTTCCTCCCAGTGTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YFLFRVQFLPVC*LFRVHFLPVCL Trigger: CAAGCACACTGGGAGGAAGTGCACTCTGAAGAGCAAGCACACTGGGAGGAATTGGACTCTGAAGAGAAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
||
| CDS-3UTR TCA 90 bp | ATGTGTGTGGGGAAAAGGACAGCTTGCAGGAGTTCAGACCTGAGAACTGAACTCCCCCTTCAATTGAGCTaGTCCAGTCATCATGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: MCVGKRTACRSSDLRTELPLQLS*SSHHGT Trigger: TGTTCCATGATGACTGGATCAGCTCAATTGAAGGGG...GAGTTCAGTTCTCAGGTCTGAACTCCTGCAAGCTGTCCTTTTCCCCACACACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
||
| CDS-3UTR TCA 90 bp | ATGTGTGTGGGGAAAAGGACAGCTTGCAGGAGTTCAGACCTGAGAACTGAACTCTTCTGCCCCTTCAATTaGGCTGATCCAGTCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: MCVGKRTACRSSDLRTELFCPFN*ADPVIM Trigger: CATGATGACTGGATCAGCTCAATTGAAGGGGCAGAA...GAGTTCAGTTCTCAGGTCTGAACTCCTGCAAGCTGTCCTTTTCCCCACACACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| CDS-3UTR CCA 90 bp | AGAGACTCAGGGAACCATGGCTGGCTGCCTTTAAGCTCACTATACAGCAGAGGGAACTCGACATGCTTGTaGAGTTCATTTTTGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RDSGNHGWLPLSSLYSRGNSTCL*SSFLVS Trigger: GGAGACCAAAAATGAACTCCACAAGCATGTCGAGTT...CCCTCTGCTGTATAGTGAGCTTAAAGGCAGCCAGCCATGGTTCCCTGAGTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| 3UTR CAA 72 bp | GATGGGGAAAGGAAAAGACTGACTGTAGTGGTCTTGTaGAGGACCAGAGTTCAGTTTCCAGCACCCACAACA | + |
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Preference number: 4 (lower is better) Translates to: DGERKRLTVVVL*RTRVQFPAPTT Trigger: TGTTGTGGGTGCTGGAAACTGAACTCTGGTCCTCAACAAGACCACTACAGTCAGTCTTTTCCTTTCCCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| CDS-3UTR TCA 90 bp | ATGTGTGTGGGGAAAAGGACAGCTTGCAGGAGTTCAGACCTGAGAACTGAACTCCACAACCTCTTCCGATaGAATGTTCTCCAGTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: MCVGKRTACRSSDLRTELHNLFR*NVLQFH Trigger: ATGGAACTGGAGAACATTTCATCGGAAGAGGTTGTG...GAGTTCAGTTCTCAGGTCTGAACTCCTGCAAGCTGTCCTTTTCCCCACACACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| CDS-3UTR TCA 90 bp | GAACCATCACTGCCCTGCTGCTCAATGAATGGACAAATTAACATCTACATTGTTAGCAGCGGCAGGGATTaGGAAAGGGACATCATCCAC | + |
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Preference number: 4 (lower is better) Translates to: EPSLPCCSMNGQINIYIVSSGRD*ERDIIH Trigger: GTGGATGATGTCCCTTTCTCAATCCCTGCCGCTGCT...AACAATGTAGATGTTAATTTGTCCATTCATTGAGCAGCAGGGCAGTGATGGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| CDS-3UTR TCA 90 bp | CCCATTTTTCTTTGGGCAGTGCTGGAGATAGCATGCAGGGCTGTGCACATTTTACACAACCTCTTCCGATaGAATGTTCTCCAGTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: PIFLWAVLEIACRAVHILHNLFR*NVLQFH Trigger: ATGGAACTGGAGAACATTTCATCGGAAGAGGTTGTG...TAAAATGTGCACAGCCCTGCATGCTATCTCCAGCACTGCCCAAAGAAAAATGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| CDS-3UTR TCA 90 bp | GAACCATCACTGCCCTGCTGCTCAATGAATGGACAAATTAACATCTACATTGTTAGCCTGTGTGTGAGGTaGGAGACAGCGACACCAAAG | + |
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Preference number: 4 (lower is better) Translates to: EPSLPCCSMNGQINIYIVSLCVR*ETATPK Trigger: CTTTGGTGTCGCTGTCTCTCACCTCACACACAGGCT...AACAATGTAGATGTTAATTTGTCCATTCATTGAGCAGCAGGGCAGTGATGGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| CDS-3UTR GCA 90 bp | CCCATTTTTCTTTGGGCAGTGCTGGAGATAGCATGCAGGGCTGTGCACATTTTAAGGGACATCATCCACTaGGTATTTCTTGTTCTCGCT | + |
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Preference number: 4 (lower is better) Translates to: PIFLWAVLEIACRAVHILRDIIH*VFLVLA Trigger: AGCGAGAACAAGAAATACGCAGTGGATGATGTCCCT...TAAAATGTGCACAGCCCTGCATGCTATCTCCAGCACTGCCCAAAGAAAAATGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| CDS-3UTR GCA 90 bp | ATGATATCAGAGGATTATCCATTGATTTCTTTCTTATGGAGACAGAGACTCAGGTCCACACTCCCAGCATaGCCTCGGCAGCAGTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: MISEDYPLISFLWRQRLRSTLPA*PRQQCR Trigger: TCTGCACTGCTGCCGAGGGCATGCTGGGAGTGTGGA...CCTGAGTCTCTGTCTCCATAAGAAAGAAATCAATGGATAATCCTCTGATATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| 3UTR CAA 72 bp | CTTCCATTTGTCTTTGATACATGGGCCTCCTCACCTTaGTTCTTCGGAATGCTTGAATGCCGTATGCGTACC | + |
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Preference number: 4 (lower is better) Translates to: LPFVFDTWASSP*FFGMLECRMRT Trigger: GGTACGCATACGGCATTCAAGCATTCCGAAGAACAAAGGTGAGGAGGCCCATGTATCAAAGACAAATGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR CAA 72 bp | ACAGATGGTTGTGAGACACCATGTGGTTGCTGGGATTaGAATTCAGGACTGTCAGAAGAGCAGTCCAAACAC | + |
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Preference number: 4 (lower is better) Translates to: TDGCETPCGCWD*NSGLSEEQSKH Trigger: GTGTTTGGACTGCTCTTCTGACAGTCCTGAATTCAAATCCCAGCAACCACATGGTGTCTCACAACCATCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| CDS-3UTR TCA 90 bp | AAAATGCAGGCCTGCAATATGCTGTTATATTTTTACATGACCCTATATTATGCCCACCCAGCCTGTGTGTaGGGTGAGAGACAGCGACAC | + |
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Preference number: 4 (lower is better) Translates to: KMQACNMLLYFYMTLYYAHPACV*GERQRH Trigger: GTGTCGCTGTCTCTCACCTCACACACAGGCTGGGTG...GGCATAATATAGGGTCATGTAAAAATATAACAGCATATTGCAGGCCTGCATTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| CDS-3UTR GCA 90 bp | CAGAAAGCTGCTATCATCTCTGCAGCCATCTCGGGCAATTTACTTACATGTGGTAGGGACATCATCCACTaGGTATTTCTTGTTCTCGCT | + |
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Preference number: 4 (lower is better) Translates to: QKAAIISAAISGNLLTCGRDIIH*VFLVLA Trigger: AGCGAGAACAAGAAATACGCAGTGGATGATGTCCCT...ACCACATGTAAGTAAATTGCCCGAGATGGCTGCAGAGATGATAGCAGCTTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| CDS-3UTR CCA 90 bp | CCCATTTTTCTTTGGGCAGTGCTGGAGATAGCATGCAGGGCTGTGCACATTTTAAACTCGACATGCTTGTaGAGTTCATTTTTGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PIFLWAVLEIACRAVHILNSTCL*SSFLVS Trigger: GGAGACCAAAAATGAACTCCACAAGCATGTCGAGTT...TAAAATGTGCACAGCCCTGCATGCTATCTCCAGCACTGCCCAAAGAAAAATGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| 3UTR CAA 72 bp | TCAAGCTATTTAGATTTTTCTGTGCCTCTCCCTCAGTaGGAAACAACCTGCCCCCTCTTTCACCTGTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: SSYLDFSVPLPQ*ETTCPLFHLSK Trigger: TTTGGACAGGTGAAAGAGGGGGCAGGTTGTTTCCAACTGAGGGAGAGGCACAGAAAAATCTAAATAGCTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR CAA 72 bp | TGCTTGCTCTTCAGAGTGCACTTCCTCCCAGTGTGCTaGCTGTACTTTTGTGTTTATCACATCCTCTTGATC | + |
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Preference number: 4 (lower is better) Translates to: CLLFRVHFLPVC*LYFCVYHILLI Trigger: GATCAAGAGGATGTGATAAACACAAAAGTACAGCAAGCACACTGGGAGGAAGTGCACTCTGAAGAGCAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR CAA 72 bp | GGCCTGAACAGAAATAAGGTTGCCATGGAACCAGGATaGAGATTAAGACTAGGTAAAGGGCCAGTTTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: GLNRNKVAMEPG*RLRLGKGPVSD Trigger: ATCTGAAACTGGCCCTTTACCTAGTCTTAATCTCAATCCTGGTTCCATGGCAACCTTATTTCTGTTCAGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| 3UTR CAA 72 bp | ACCCATAGTTGCCTTTCAATAAATGAGACAGGAGACTaGAACCTTGAGCAGATAGCCTGTGTTGTCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: THSCLSINETGD*NLEQIACVVSI Trigger: AATGGAGACAACACAGGCTATCTGCTCAAGGTTCAAGTCTCCTGTCTCATTTATTGAAAGGCAACTATGGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| CDS-3UTR TCA 90 bp | ATGATATCAGAGGATTATCCATTGATTTCTTTCTTATGGAGACAGAGACTCAGGTTCTGCCCCTTCAATTaGGCTGATCCAGTCATCATG | + |
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Preference number: 4 (lower is better) Translates to: MISEDYPLISFLWRQRLRFCPFN*ADPVIM Trigger: CATGATGACTGGATCAGCTCAATTGAAGGGGCAGAA...CCTGAGTCTCTGTCTCCATAAGAAAGAAATCAATGGATAATCCTCTGATATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| CDS-3UTR TCA 90 bp | AAAATGCAGGCCTGCAATATGCTGTTATATTTTTACATGACCCTATATTATGCCTTCTGCCCCTTCAATTaGGCTGATCCAGTCATCATG | + |
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Preference number: 4 (lower is better) Translates to: KMQACNMLLYFYMTLYYAFCPFN*ADPVIM Trigger: CATGATGACTGGATCAGCTCAATTGAAGGGGCAGAA...GGCATAATATAGGGTCATGTAAAAATATAACAGCATATTGCAGGCCTGCATTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| CDS-3UTR GCA 90 bp | ATGATATCAGAGGATTATCCATTGATTTCTTTCTTATGGAGACAGAGACTCAGGAGGGACATCATCCACTaGGTATTTCTTGTTCTCGCT | + |
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Preference number: 4 (lower is better) Translates to: MISEDYPLISFLWRQRLRRDIIH*VFLVLA Trigger: AGCGAGAACAAGAAATACGCAGTGGATGATGTCCCT...CCTGAGTCTCTGTCTCCATAAGAAAGAAATCAATGGATAATCCTCTGATATCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| CDS-3UTR CCA 90 bp | ATGATATCAGAGGATTATCCATTGATTTCTTTCTTATGGAGACAGAGACTCAGGAACTCGACATGCTTGTaGAGTTCATTTTTGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: MISEDYPLISFLWRQRLRNSTCL*SSFLVS Trigger: GGAGACCAAAAATGAACTCCACAAGCATGTCGAGTT...CCTGAGTCTCTGTCTCCATAAGAAAGAAATCAATGGATAATCCTCTGATATCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| 3UTR CAA 72 bp | ATTTTCTGCATTCCATCACTTCCTTTGTACAATTCCTaGAAAATCTGCCAATTGTTAAAGATTGTCAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: IFCIPSLPLYNS*KICQLLKIVSG Trigger: GCCACTGACAATCTTTAACAATTGGCAGATTTTCAAGGAATTGTACAAAGGAAGTGATGGAATGCAGAAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| CDS-3UTR CAA 90 bp | ATGTGTGTGGGGAAAAGGACAGCTTGCAGGAGTTCAGACCTGAGAACTGAACTCCAGCAGCGGCAGGGATaGAGAAAGGGACATCATCCA | + |
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Preference number: 5 (lower is better) Translates to: MCVGKRTACRSSDLRTELQQRQG*RKGHHP Trigger: TGGATGATGTCCCTTTCTCAATCCCTGCCGCTGCTG...GAGTTCAGTTCTCAGGTCTGAACTCCTGCAAGCTGTCCTTTTCCCCACACACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| CDS-3UTR CAA 90 bp | CAGAAAGCTGCTATCATCTCTGCAGCCATCTCGGGCAATTTACTTACATGTGGTCAGCAGCGGCAGGGATaGAGAAAGGGACATCATCCA | + |
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Preference number: 5 (lower is better) Translates to: QKAAIISAAISGNLLTCGQQRQG*RKGHHP Trigger: TGGATGATGTCCCTTTCTCAATCCCTGCCGCTGCTG...ACCACATGTAAGTAAATTGCCCGAGATGGCTGCAGAGATGATAGCAGCTTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027173.15 |
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| CDS-3UTR CAA 90 bp | AGAGACTCAGGGAACCATGGCTGGCTGCCTTTAAGCTCACTATACAGCAGAGGGTCACCAAGGGTGTTCTaGTTAGTCCCAATTGTTCTG | + |
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Preference number: 5 (lower is better) Translates to: RDSGNHGWLPLSSLYSRGSPRVF*LVPIVL Trigger: CAGAACAATTGGGACTAACAAGAACACCCTTGGTGA...CCCTCTGCTGTATAGTGAGCTTAAAGGCAGCCAGCCATGGTTCCCTGAGTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| CDS-3UTR CAA 90 bp | CCCATTTTTCTTTGGGCAGTGCTGGAGATAGCATGCAGGGCTGTGCACATTTTATCACCAAGGGTGTTCTaGTTAGTCCCAATTGTTCTG | + |
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Preference number: 5 (lower is better) Translates to: PIFLWAVLEIACRAVHILSPRVF*LVPIVL Trigger: CAGAACAATTGGGACTAACAAGAACACCCTTGGTGA...TAAAATGTGCACAGCCCTGCATGCTATCTCCAGCACTGCCCAAAGAAAAATGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| CDS-3UTR CAA 90 bp | ATGTGTGTGGGGAAAAGGACAGCTTGCAGGAGTTCAGACCTGAGAACTGAACTCTTGTGGAGTTCATTTTaGGTCTCCAGCAACTTATTG | + |
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Preference number: 5 (lower is better) Translates to: MCVGKRTACRSSDLRTELLWSSF*VSSNLL Trigger: CAATAAGTTGCTGGAGACCAAAAATGAACTCCACAA...GAGTTCAGTTCTCAGGTCTGAACTCCTGCAAGCTGTCCTTTTCCCCACACACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| CDS-3UTR CAA 90 bp | ATGATATCAGAGGATTATCCATTGATTTCTTTCTTATGGAGACAGAGACTCAGGCAGCAGCGGCAGGGATaGAGAAAGGGACATCATCCA | + |
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Preference number: 5 (lower is better) Translates to: MISEDYPLISFLWRQRLRQQRQG*RKGHHP Trigger: TGGATGATGTCCCTTTCTCAATCCCTGCCGCTGCTG...CCTGAGTCTCTGTCTCCATAAGAAAGAAATCAATGGATAATCCTCTGATATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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| CDS-3UTR CAA 90 bp | GAACCATCACTGCCCTGCTGCTCAATGAATGGACAAATTAACATCTACATTGTTTTGTGGAGTTCATTTTaGGTCTCCAGCAACTTATTG | + |
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Preference number: 5 (lower is better) Translates to: EPSLPCCSMNGQINIYIVLWSSF*VSSNLL Trigger: CAATAAGTTGCTGGAGACCAAAAATGAACTCCACAA...AACAATGTAGATGTTAATTTGTCCATTCATTGAGCAGCAGGGCAGTGATGGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027173.15 ENSMUST00000117438.8 ENSMUST00000122038.8 |
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