RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDR11 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000042055

Ensembl transcript IDs: ENSMUST00000084519.7, ENSMUST00000136560.3, ENSMUST00000148752.8, ENSMUST00000206442.2

Found 304 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAACAGCACCCAGCTCTGCATCGGAGACCACAGTCTGGCGGGCCATaGCCTCCCGGGTGGCAAGCTGCTTCTTTCTCAGGCTCTTCAGGT +
Preference number: 1 (lower is better)
Translates to: QQHPALHRRPQSGGP*PPGWQAASFSGSSG
Trigger: ACCTGAAGAGCCTGAGAAAGAAGCAGCTTGCCACCCGGGAGGCCATGGCCCGCCAGACTGTGGTCTCCGATGCAGAGCTGGGTGCTGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR CCA 90 bp ACAGATGATTCAACAGCACCCAGCTCTGCATCGGAGACCACAGTCTaGCGGGCCATGGCCTCCCGGGTGGCAAGCTGCTTCTTTCTCAGG +
Preference number: 1 (lower is better)
Translates to: TDDSTAPSSASETTV*RAMASRVASCFFLR
Trigger: CCTGAGAAAGAAGCAGCTTGCCACCCGGGAGGCCATGGCCCGCCAGACTGTGGTCTCCGATGCAGAGCTGGGTGCTGTTGAATCATCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR CCA 90 bp GAAGGTGGTGTCACAGCTAACAAGGGCCAAGCCCTCACGCAGGTCTaGACTGACCATAGCTGTGACCAGGAGCACAGCCAGGTCAGCTCT +
Preference number: 1 (lower is better)
Translates to: EGGVTANKGQALTQV*TDHSCDQEHSQVSS
Trigger: AGAGCTGACCTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCAGACCTGCGTGAGGGCTTGGCCCTTGTTAGCTGTGACACCACCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
3UTR CCA 90 bp CACGAGTGGACACTGAGCTCCTTGTGCAGCAGGCCACTGGTGAGGTaGTACACCAGGACAGAACCGTTACTCGTACCAACAGCAAGGAGT +
Preference number: 1 (lower is better)
Translates to: HEWTLSSLCSRPLVR*YTRTEPLLVPTARS
Trigger: ACTCCTTGCTGTTGGTACGAGTAACGGTTCTGTCCTGGTGTACCACCTCACCAGTGGCCTGCTGCACAAGGAGCTCAGTGTCCACTCGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR TCA 90 bp AGCAACCCAGAGAGAGGAGGACCAGGAGGGCCTTGGACTTCTGGTTaGCTTGTGGAGAACAAAGGTGGTCAACCCACCGCTTCAGAACAT +
Preference number: 1 (lower is better)
Translates to: SNPERGGPGGPWTSG*LVENKGGQPTASEH
Trigger: ATGTTCTGAAGCGGTGGGTTGACCACCTTTGTTCTCCACAAGTCAACCAGAAGTCCAAGGCCCTCCTGGTCCTCCTCTCTCTGGGTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR GCA 90 bp AGCTCCGATTCATCGCCGTACAGCCTGGACACGAGCAGGCACCTCTaGAAGAGAGAGAAGTCGGGATCAAGCAGGAGTTTCTTTATGTCG +
Preference number: 1 (lower is better)
Translates to: SSDSSPYSLDTSRHL*KREKSGSSRSFFMS
Trigger: CGACATAAAGAAACTCCTGCTTGATCCCGACTTCTCTCTCTTGCAGAGGTGCCTGCTCGTGTCCAGGCTGTACGGCGATGAATCGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR CCA 90 bp CAGAGAGAGGAGGACCAGGAGGGCCTTGGACTTCTGGTTGACTTGTaGAGAACAAAGGTGGTCAACCCACCGCTTCAGAACATCTGCACA +
Preference number: 1 (lower is better)
Translates to: QREEDQEGLGLLVDL*RTKVVNPPLQNICT
Trigger: TGTGCAGATGTTCTGAAGCGGTGGGTTGACCACCTTTGTTCTCCACAAGTCAACCAGAAGTCCAAGGCCCTCCTGGTCCTCCTCTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR GCA 90 bp CATTCAATACCCTTGACTTCACACGAGTGGACACTGAGCTCCTTGTaGAGCAGGCCACTGGTGAGGTGGTACACCAGGACAGAACCGTTA +
Preference number: 1 (lower is better)
Translates to: HSIPLTSHEWTLSSL*SRPLVRWYTRTEPL
Trigger: TAACGGTTCTGTCCTGGTGTACCACCTCACCAGTGGCCTGCTGCACAAGGAGCTCAGTGTCCACTCGTGTGAAGTCAAGGGTATTGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR GCA 90 bp GACCAAGCAAGCTTTCAGAGAGTCGCAGTAGTAGTGCTGGTTATCTaGACTTGTTTCCAACAGCAGCTGCACAGCTCTGTCTGTCTGGCC +
Preference number: 1 (lower is better)
Translates to: DQASFQRVAVVVLVI*TCFQQQLHSSVCLA
Trigger: GGCCAGACAGACAGAGCTGTGCAGCTGCTGTTGGAAACAAGTGCAGATAACCAGCACTACTACTGCGACTCTCTGAAAGCTTGCTTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR TCA 90 bp GCCTCCCGGGTGGCAAGCTGCTTCTTTCTCAGGCTCTTCAGGTTGTaGGATGGTGACCACTCCAATGCAGTTATAGCAGGGAAACTTTTA +
Preference number: 1 (lower is better)
Translates to: ASRVASCFFLRLFRL*DGDHSNAVIAGKLL
Trigger: TAAAAGTTTCCCTGCTATAACTGCATTGGAGTGGTCACCATCTCACAACCTGAAGAGCCTGAGAAAGAAGCAGCTTGCCACCCGGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR GCA 90 bp GCTGCACAGCTCTGTCTGTCTGGCCTAGCAGCAGGAGCTGGTCTGTaGACTTTCTCGTGTGATCATAAGTTGACCGTTTTACTTCCTGTA +
Preference number: 1 (lower is better)
Translates to: AAQLCLSGLAAGAGL*TFSCDHKLTVLLPV
Trigger: TACAGGAAGTAAAACGGTCAACTTATGATCACACGAGAAAGTGCACAGACCAGCTCCTGCTGCTAGGCCAGACAGACAGAGCTGTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR GCA 90 bp TTTCAATGGGTGATTCGTCATTGCCCCGGTCACCACGGAAAGCAGTaGTCCTCCCTGTTGGGAGATCAACCAGCTGAAGTTCATTTCTTA +
Preference number: 1 (lower is better)
Translates to: FQWVIRHCPGHHGKQ*SSLLGDQPAEVHFL
Trigger: TAAGAAATGAACTTCAGCTGGTTGATCTCCCAACAGGGAGGAGCACTGCTTTCCGTGGTGACCGGGGCAATGACGAATCACCCATTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR TCA 90 bp GATCATATTGGTTGCTACCAGCTTAATTGTGCTCTGAGAAGGGCCTaGAGAGGTGACAGTGGTGACCAAGCAAGCTTTCAGAGAGTCGCA +
Preference number: 1 (lower is better)
Translates to: DHIGCYQLNCALRRA*RGDSGDQASFQRVA
Trigger: TGCGACTCTCTGAAAGCTTGCTTGGTCACCACTGTCACCTCTTCAGGCCCTTCTCAGAGCACAATTAAGCTGGTAGCAACCAATATGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR TCA 90 bp TTGCCATTGGCGATCATATTGGTTGCTACCAGCTTAATTGTGCTCTaGGAAGGGCCTGAAGAGGTGACAGTGGTGACCAAGCAAGCTTTC +
Preference number: 1 (lower is better)
Translates to: LPLAIILVATSLIVL*EGPEEVTVVTKQAF
Trigger: GAAAGCTTGCTTGGTCACCACTGTCACCTCTTCAGGCCCTTCTCAGAGCACAATTAAGCTGGTAGCAACCAATATGATCGCCAATGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR TCA 90 bp CAGGACTCTGATGCAGCCGTCATCAGATGCCAAGATCACCTTATCTaGTGTGCACCAGTCCACATCCAAAATCCGGAAGGTTACATTTCT +
Preference number: 1 (lower is better)
Translates to: QDSDAAVIRCQDHLI*CAPVHIQNPEGYIS
Trigger: AGAAATGTAACCTTCCGGATTTTGGATGTGGACTGGTGCACATCAGATAAGGTGATCTTGGCATCTGATGACGGCTGCATCAGAGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR GCA 90 bp CTTCAGCACCATCATTATACATTGCTATTAGCTTCTGGTTTCCCTTaGCGGGGGCAAAGCGAATCTTCCTCACCCAACTTCTATGTGTGG +
Preference number: 1 (lower is better)
Translates to: LQHHHYTLLLASGFP*RGQSESSSPNFYVW
Trigger: CCACACATAGAAGTTGGGTGAGGAAGATTCGCTTTGCCCCCGGCAAGGGAAACCAGAAGCTAATAGCAATGTATAATGATGGTGCTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR CCA 90 bp GTATCCCACACTTCAGCACCATCATTATACATTGCTATTAGCTTCTaGTTTCCCTTGCCGGGGGCAAAGCGAATCTTCCTCACCCAACTT +
Preference number: 1 (lower is better)
Translates to: VSHTSAPSLYIAISF*FPLPGAKRIFLTQL
Trigger: AAGTTGGGTGAGGAAGATTCGCTTTGCCCCCGGCAAGGGAAACCAGAAGCTAATAGCAATGTATAATGATGGTGCTGAAGTGTGGGATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR TCA 90 bp AGGTGCTGTGGTTGGTCAAATGCTTCTGCCCTGCTGTGTCCTAAATaGCTGCTTATCAACACAGGCACACACAGCACATATCTGAAAATC +
Preference number: 1 (lower is better)
Translates to: RCCGWSNASALLCPK*LLINTGTHSTYLKI
Trigger: GATTTTCAGATATGTGCTGTGTGTGCCTGTGTTGATAAGCAGTCATTTAGGACACAGCAGGGCAGAAGCATTTGACCAACCACAGCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
3UTR TCA 90 bp GTCCTAAATGACTGCTTATCAACACAGGCACACACAGCACATATCTaGAAATCCATCAGAAGCCCCATCTCTTGCCACAGATTTCTTAAA +
Preference number: 1 (lower is better)
Translates to: VLNDCLSTQAHTAHI*KSIRSPISCHRFLK
Trigger: TTTAAGAAATCTGTGGCAAGAGATGGGGCTTCTGATGGATTTTCAGATATGTGCTGTGTGTGCCTGTGTTGATAAGCAGTCATTTAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
3UTR TCA 90 bp GTGGAAGAAAACAAAGGTGGGAAATGTACAAAGAGGCTTCAGAAATaGGGTTTCTGGAACATATCCTGGGAGTTAAAATTCAGACCATCA +
Preference number: 1 (lower is better)
Translates to: VEENKGGKCTKRLQK*GFWNISWELKFRPS
Trigger: TGATGGTCTGAATTTTAACTCCCAGGATATGTTCCAGAAACCTCATTTCTGAAGCCTCTTTGTACATTTCCCACCTTTGTTTTCTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
3UTR-3UTR TCA 90 bp CAAGCCATGCCGCCCGATTCCACTCGCCATACGTCTGCAGGTAGCGACAGGCGTAGCTTAATTGTGCTCTaGGAAGGGCCTGAAGAGGTG +
Preference number: 2 (lower is better)
Translates to: QAMPPDSTRHTSAGSDRRSLIVL*EGPEEV
Trigger: CACCTCTTCAGGCCCTTCTCAGAGCACAATTAAGCT...ACGCCTGTCGCTACCTGCAGACGTATGGCGAGTGGAATCGGGCGGCATGGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR-3UTR TCA 90 bp GAATTTAACCGAACCTTTGCAAGCCATGCCGCCCGATTCCACTCGCCATACGTCGCAGCAGGCCACTGGTaGGGTGGTACACCAGGACAG +
Preference number: 2 (lower is better)
Translates to: EFNRTFASHAARFHSPYVAAGHW*GGTPGQ
Trigger: CTGTCCTGGTGTACCACCTCACCAGTGGCCTGCTGC...GACGTATGGCGAGTGGAATCGGGCGGCATGGCTTGCAAAGGTTCGGTTAAATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR GCA 90 bp TCCACTCGCCATACGTCTGCAGGTAGCGACAGGCGTCCGCAGCCTTGTCTATCACACCACGGAAAGCAGTaGTCCTCCCTGTTGGGAGAT +
Preference number: 2 (lower is better)
Translates to: STRHTSAGSDRRPQPCLSHHGKQ*SSLLGD
Trigger: ATCTCCCAACAGGGAGGAGCACTGCTTTCCGTGGTG...TGATAGACAAGGCTGCGGACGCCTGTCGCTACCTGCAGACGTATGGCGAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR CAA 90 bp CAGATGTCCAATGGGTTGCTCAGCCTGTCCTTAGGAGCACCTTCCTaGGTTACCACTGTGTCCCCAGACTTGGCCTGGGACAAGCTGTGC +
Preference number: 2 (lower is better)
Translates to: QMSNGLLSLSLGAPS*VTTVSPDLAWDKLC
Trigger: GCACAGCTTGTCCCAGGCCAAGTCTGGGGACACAGTGGTAACCAAGGAAGGTGCTCCTAAGGACAGGCTGAGCAACCCATTGGACATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR CAA 90 bp ACCCAGAGAGAGGAGGACCAGGAGGGCCTTGGACTTCTGGTTGACTaGTGGAGAACAAAGGTGGTCAACCCACCGCTTCAGAACATCTGC +
Preference number: 2 (lower is better)
Translates to: TQREEDQEGLGLLVD*WRTKVVNPPLQNIC
Trigger: GCAGATGTTCTGAAGCGGTGGGTTGACCACCTTTGTTCTCCACAAGTCAACCAGAAGTCCAAGGCCCTCCTGGTCCTCCTCTCTCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR CAA 90 bp GTCCATTCAATACCCTTGACTTCACACGAGTGGACACTGAGCTCCTaGTGCAGCAGGCCACTGGTGAGGTGGTACACCAGGACAGAACCG +
Preference number: 2 (lower is better)
Translates to: VHSIPLTSHEWTLSS*CSRPLVRWYTRTEP
Trigger: CGGTTCTGTCCTGGTGTACCACCTCACCAGTGGCCTGCTGCACAAGGAGCTCAGTGTCCACTCGTGTGAAGTCAAGGGTATTGAATGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR GCA 90 bp AACCTTTGCAAGCCATGCCGCCCGATTCCACTCGCCATACGTCTGCAGGTAGCGGCAGGAGCTGGTCTGTaGACTTTCTCGTGTGATCAT +
Preference number: 2 (lower is better)
Translates to: NLCKPCRPIPLAIRLQVAAGAGL*TFSCDH
Trigger: ATGATCACACGAGAAAGTGCACAGACCAGCTCCTGC...CGCTACCTGCAGACGTATGGCGAGTGGAATCGGGCGGCATGGCTTGCAAAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR CAA 90 bp AAGCAACCCAGAGAGAGGAGGACCAGGAGGGCCTTGGACTTCTGGTaGACTTGTGGAGAACAAAGGTGGTCAACCCACCGCTTCAGAACA +
Preference number: 2 (lower is better)
Translates to: KQPRERRTRRALDFW*TCGEQRWSTHRFRT
Trigger: TGTTCTGAAGCGGTGGGTTGACCACCTTTGTTCTCCACAAGTCAACCAGAAGTCCAAGGCCCTCCTGGTCCTCCTCTCTCTGGGTTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR-3UTR TCA 90 bp CCCCAGACTTGGCCTGGGACAAGCTGTGCAGGTAGTGGGCCGCCACTGTCCAGACCTCCTGTAATAAACTaGTCACAGATGATTCAACAG +
Preference number: 2 (lower is better)
Translates to: PQTWPGTSCAGSGPPLSRPPVIN*SQMIQQ
Trigger: CTGTTGAATCATCTGTGATCAGTTTATTACAGGAGG...TCTGGACAGTGGCGGCCCACTACCTGCACAGCTTGTCCCAGGCCAAGTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR CCA 90 bp TTGGCCATCATTGTCAGTAAACACAAAATGCTCCCGAGCAGAGATGTTCTGACTCAGTCTGGCGGGCCATaGCCTCCCGGGTGGCAAGCT +
Preference number: 2 (lower is better)
Translates to: LAIIVSKHKMLPSRDVLTQSGGP*PPGWQA
Trigger: AGCTTGCCACCCGGGAGGCCATGGCCCGCCAGACTG...AGTCAGAACATCTCTGCTCGGGAGCATTTTGTGTTTACTGACAATGATGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR CCA 90 bp ATCGCCGTACAGCCTGGACACGAGCAGGCACCTCTGCAAGAGAGAGAAGTCGGGCCCAACTTCTATGTGTaGGTATTCCTCTGGATACTC +
Preference number: 2 (lower is better)
Translates to: IAVQPGHEQAPLQEREVGPNFYV*VFLWIL
Trigger: GAGTATCCAGAGGAATACCCACACATAGAAGTTGGG...CCCGACTTCTCTCTCTTGCAGAGGTGCCTGCTCGTGTCCAGGCTGTACGGCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR CCA 90 bp ATTCTTCAGAATTTAACCGAACCTTTGCAAGCCATGCCGCCCGATTCCACTCGCAGGCCACTGGTGAGGTaGTACACCAGGACAGAACCG +
Preference number: 2 (lower is better)
Translates to: ILQNLTEPLQAMPPDSTRRPLVR*YTRTEP
Trigger: CGGTTCTGTCCTGGTGTACCACCTCACCAGTGGCCT...GCGAGTGGAATCGGGCGGCATGGCTTGCAAAGGTTCGGTTAAATTCTGAAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR TCA 90 bp ACAAGGAGGTACGGGCACCACACAGGCTCTACTAACTCCTGCTCATCCATTCTGCGAGCAGAGATGTTCTaGCTGAGTTCAGCCTTACTC +
Preference number: 2 (lower is better)
Translates to: TRRYGHHTGSTNSCSSILRAEMF*LSSALL
Trigger: GAGTAAGGCTGAACTCAGTCAGAACATCTCTGCTCG...CAGAATGGATGAGCAGGAGTTAGTAGAGCCTGTGTGGTGCCCGTACCTCCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR CAA 90 bp ACCGCTTCAGAACATCTGCACATTCTTCAGAATTTAACCGAACCTTaGCAAGCCATGCCGCCCGATTCCACTCGCCATACGTCTGCAGGT +
Preference number: 2 (lower is better)
Translates to: TASEHLHILQNLTEP*QAMPPDSTRHTSAG
Trigger: ACCTGCAGACGTATGGCGAGTGGAATCGGGCGGCATGGCTTGCAAAGGTTCGGTTAAATTCTGAAGAATGTGCAGATGTTCTGAAGCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR CAA 90 bp ATTCGTCATTGCCCCGGTCACCACGGAAAGCAGTGCTCCTCCCTGTaGGGAGATCAACCAGCTGAAGTTCATTTCTTACTAACCCCATGT +
Preference number: 2 (lower is better)
Translates to: IRHCPGHHGKQCSSL*GDQPAEVHFLLTPC
Trigger: ACATGGGGTTAGTAAGAAATGAACTTCAGCTGGTTGATCTCCCAACAGGGAGGAGCACTGCTTTCCGTGGTGACCGGGGCAATGACGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR TCA 90 bp GGTCAACCCACCGCTTCAGAACATCTGCACATTCTTCAGAATTTAACCGAACCTGCTCTGAGAAGGGCCTaGAGAGGTGACAGTGGTGAC +
Preference number: 2 (lower is better)
Translates to: GQPTASEHLHILQNLTEPALRRA*RGDSGD
Trigger: GTCACCACTGTCACCTCTTCAGGCCCTTCTCAGAGC...AGGTTCGGTTAAATTCTGAAGAATGTGCAGATGTTCTGAAGCGGTGGGTTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR-3UTR TCA 90 bp CAATGGGTTGCTCAGCCTGTCCTTAGGAGCACCTTCCTTGGTTACCACTGTGTCCAGAGATGTTCTGACTaGGTTCAGCCTTACTCTCTG +
Preference number: 2 (lower is better)
Translates to: QWVAQPVLRSTFLGYHCVQRCSD*VQPYSL
Trigger: CAGAGAGTAAGGCTGAACTCAGTCAGAACATCTCTG...GACACAGTGGTAACCAAGGAAGGTGCTCCTAAGGACAGGCTGAGCAACCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR TCA 90 bp ACAAGGAGGTACGGGCACCACACAGGCTCTACTAACTCCTGCTCATCCATTCTGCAAGATCACCTTATCTaGTGTGCACCAGTCCACATC +
Preference number: 2 (lower is better)
Translates to: TRRYGHHTGSTNSCSSILQDHLI*CAPVHI
Trigger: GATGTGGACTGGTGCACATCAGATAAGGTGATCTTG...CAGAATGGATGAGCAGGAGTTAGTAGAGCCTGTGTGGTGCCCGTACCTCCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR GCA 90 bp GGCAAAGCGAATCTTCCTCACCCAACTTCTATGTGTGGGTATTCCTCTGGATACTCCCGGGTGGCAAGCTaGTTCTTTCTCAGGCTCTTC +
Preference number: 2 (lower is better)
Translates to: GKANLPHPTSMCGYSSGYSRVAS*FFLRLF
Trigger: GAAGAGCCTGAGAAAGAAGCAGCTTGCCACCCGGGA...GTATCCAGAGGAATACCCACACATAGAAGTTGGGTGAGGAAGATTCGCTTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR CAA 90 bp GCAGCAAAAGAAAGGAAACTGGTCAAGCTTGTCCATTCAATACCCTaGACTTCACACGAGTGGACACTGAGCTCCTTGTGCAGCAGGCCA +
Preference number: 2 (lower is better)
Translates to: AAKERKLVKLVHSIP*TSHEWTLSSLCSRP
Trigger: TGGCCTGCTGCACAAGGAGCTCAGTGTCCACTCGTGTGAAGTCAAGGGTATTGAATGGACAAGCTTGACCAGTTTCCTTTCTTTTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR CCA 90 bp TGGTCAACCCACCGCTTCAGAACATCTGCACATTCTTCAGAATTTAACCGAACCCCTAGCAGCAGGAGCTaGTCTGTGCACTTTCTCGTG +
Preference number: 2 (lower is better)
Translates to: WSTHRFRTSAHSSEFNRTPSSRS*SVHFLV
Trigger: CACGAGAAAGTGCACAGACCAGCTCCTGCTGCTAGG...GGTTCGGTTAAATTCTGAAGAATGTGCAGATGTTCTGAAGCGGTGGGTTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR-3UTR CCA 90 bp CAATGGGTTGCTCAGCCTGTCCTTAGGAGCACCTTCCTTGGTTACCACTGTGTCCTTCTGGTTGACTTGTaGAGAACAAAGGTGGTCAAC +
Preference number: 2 (lower is better)
Translates to: QWVAQPVLRSTFLGYHCVLLVDL*RTKVVN
Trigger: GTTGACCACCTTTGTTCTCCACAAGTCAACCAGAAG...GACACAGTGGTAACCAAGGAAGGTGCTCCTAAGGACAGGCTGAGCAACCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR GCA 90 bp CTCTTTCTAGCTGAAATTTCTGGAAGTAGGTGTTCTCACAGAGCACATCGTAGCACGAGCAGGCACCTCTaGAAGAGAGAGAAGTCGGGA +
Preference number: 2 (lower is better)
Translates to: LFLAEISGSRCSHRAHRSTSRHL*KREKSG
Trigger: TCCCGACTTCTCTCTCTTGCAGAGGTGCCTGCTCGT...GCTACGATGTGCTCTGTGAGAACACCTACTTCCAGAAATTTCAGCTAGAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR CCA 90 bp TCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAGGTGCTGTCTGGCTCCTAGTGTATaGGCCTATGCTGCTGAGCAC +
Preference number: 2 (lower is better)
Translates to: SAMSKAKNPPRPQEKRCCLAPSV*AYAAEH
Trigger: GTGCTCAGCAGCATAGGCCCATACACTAGGAGCCAG...ACAGCACCTCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
3UTR-3UTR CCA 90 bp CTGAACACCCTCTGCCAGCTTGCCATTGGCGATCATATTGGTTGCTACCAGCTTCTTCTGGTTGACTTGTaGAGAACAAAGGTGGTCAAC +
Preference number: 2 (lower is better)
Translates to: LNTLCQLAIGDHIGCYQLLLVDL*RTKVVN
Trigger: GTTGACCACCTTTGTTCTCCACAAGTCAACCAGAAG...AAGCTGGTAGCAACCAATATGATCGCCAATGGCAAGCTGGCAGAGGGTGTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR-3UTR CCA 90 bp TGGTCAACCCACCGCTTCAGAACATCTGCACATTCTTCAGAATTTAACCGAACCGTAGCAGATGTCCAATaGGTTGCTCAGCCTGTCCTT +
Preference number: 2 (lower is better)
Translates to: WSTHRFRTSAHSSEFNRTVADVQ*VAQPVL
Trigger: AAGGACAGGCTGAGCAACCCATTGGACATCTGCTAC...GGTTCGGTTAAATTCTGAAGAATGTGCAGATGTTCTGAAGCGGTGGGTTGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR CAA 90 bp ACTTCAGCACCATCATTATACATTGCTATTAGCTTCTGGTTTCCCTaGCCGGGGGCAAAGCGAATCTTCCTCACCCAACTTCTATGTGTG +
Preference number: 2 (lower is better)
Translates to: TSAPSLYIAISFWFP*PGAKRIFLTQLLCV
Trigger: CACACATAGAAGTTGGGTGAGGAAGATTCGCTTTGCCCCCGGCAAGGGAAACCAGAAGCTAATAGCAATGTATAATGATGGTGCTGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR TCA 90 bp GCGAATCTTCCTCACCCAACTTCTATGTGTGGGTATTCCTCTGGATACTCTGGCGGGAGATCAACCAGCTaGAGTTCATTTCTTACTAAC +
Preference number: 2 (lower is better)
Translates to: ANLPHPTSMCGYSSGYSGGRSTS*SSFLTN
Trigger: GTTAGTAAGAAATGAACTTCAGCTGGTTGATCTCCC...GCCAGAGTATCCAGAGGAATACCCACACATAGAAGTTGGGTGAGGAAGATTCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR GCA 90 bp ACGTGCTCCATGAAGACTATGAGCCCCAAATACAAAGTTCAGCAATGTCTAAAGCTGTGGTTGGTCAAATaGTTCTGCCCTGCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: TCSMKTMSPKYKVQQCLKLWLVK*FCPAVS
Trigger: GGACACAGCAGGGCAGAAGCATTTGACCAACCACAG...CTTTAGACATTGCTGAACTTTGTATTTGGGGCTCATAGTCTTCATGGAGCACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
3UTR-3UTR GCA 90 bp AATCAATGTGAGAAATGTCCAACGAATATCGCCCATTCCAAGGCTGATGCAGTACACCCTCTGCCAGCTTaGCATTGGCGATCATATTGG +
Preference number: 2 (lower is better)
Translates to: NQCEKCPTNIAHSKADAVHPLPA*HWRSYW
Trigger: CCAATATGATCGCCAATGGCAAGCTGGCAGAGGGTG...TACTGCATCAGCCTTGGAATGGGCGATATTCGTTGGACATTTCTCACATTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR CCA 90 bp CTATGTGTGGGTATTCCTCTGGATACTCTGGCTTTCAAATCCCAGAAGTTTAAACCTAGCAGCAGGAGCTaGTCTGTGCACTTTCTCGTG +
Preference number: 2 (lower is better)
Translates to: LCVGIPLDTLAFKSQKFKPSSRS*SVHFLV
Trigger: CACGAGAAAGTGCACAGACCAGCTCCTGCTGCTAGG...TTTAAACTTCTGGGATTTGAAAGCCAGAGTATCCAGAGGAATACCCACACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR TCA 90 bp ATTGACATCTCCAGGACTCTGATGCAGCCGTCATCAGATGCCAAGATCACCTTACCAGGGGCTTATCTTTaGAAACAACTGCCAAATACT +
Preference number: 2 (lower is better)
Translates to: IDISRTLMQPSSDAKITLPGAYL*KQLPNT
Trigger: AGTATTTGGCAGTTGTTTTCAAAGATAAGCCCCTGG...TAAGGTGATCTTGGCATCTGATGACGGCTGCATCAGAGTCCTGGAGATGTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR TCA 90 bp CTGAGTTCAGCCTTACTCTCTGCCTCCTGTAATAAACTGATCACAGATGATTCAAGGCTCTTCAGGTTGTaGGATGGTGACCACTCCAAT +
Preference number: 2 (lower is better)
Translates to: LSSALLSASCNKLITDDSRLFRL*DGDHSN
Trigger: ATTGGAGTGGTCACCATCTCACAACCTGAAGAGCCT...TGAATCATCTGTGATCAGTTTATTACAGGAGGCAGAGAGTAAGGCTGAACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR TCA 90 bp TGGTCAACCCACCGCTTCAGAACATCTGCACATTCTTCAGAATTTAACCGAACCACACGTAGACTTCATTaGCATCTCCAGGACTCTGAT +
Preference number: 2 (lower is better)
Translates to: WSTHRFRTSAHSSEFNRTTRRLH*HLQDSD
Trigger: ATCAGAGTCCTGGAGATGTCAATGAAGTCTACGTGT...GGTTCGGTTAAATTCTGAAGAATGTGCAGATGTTCTGAAGCGGTGGGTTGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR GCA 90 bp GGGCAAAGCGAATCTTCCTCACCCAACTTCTATGTGTGGGTATTCCTCTGGATATCAGTAAACACAAAATaGTCCCGAGCAGAGATGTTC +
Preference number: 2 (lower is better)
Translates to: GQSESSSPNFYVWVFLWISVNTK*SRAEMF
Trigger: GAACATCTCTGCTCGGGAGCATTTTGTGTTTACTGA...TATCCAGAGGAATACCCACACATAGAAGTTGGGTGAGGAAGATTCGCTTTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR GCA 90 bp TCAGAACATCTGCACATTCTTCAGAATTTAACCGAACCTTTGCAAGCCATGCCGGTAGTGCTGGTTATCTaGACTTGTTTCCAACAGCAG +
Preference number: 2 (lower is better)
Translates to: SEHLHILQNLTEPLQAMPVVLVI*TCFQQQ
Trigger: CTGCTGTTGGAAACAAGTGCAGATAACCAGCACTAC...CGGCATGGCTTGCAAAGGTTCGGTTAAATTCTGAAGAATGTGCAGATGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR-3UTR GCA 90 bp TGGTCAACCCACCGCTTCAGAACATCTGCACATTCTTCAGAATTTAACCGAACCTCACCTTATCTGATGTaGACCAGTCCACATCCAAAA +
Preference number: 2 (lower is better)
Translates to: WSTHRFRTSAHSSEFNRTSPYLM*TSPHPK
Trigger: TTTTGGATGTGGACTGGTGCACATCAGATAAGGTGA...GGTTCGGTTAAATTCTGAAGAATGTGCAGATGTTCTGAAGCGGTGGGTTGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR CCA 90 bp CTTGCCATTGGCGATCATATTGGTTGCTACCAGCTTAATTGTGCTCTGAGAAGGTTCCTCTGGATACTCTaGCTTTCAAATCCCAGAAGT +
Preference number: 2 (lower is better)
Translates to: LAIGDHIGCYQLNCALRRFLWIL*LSNPRS
Trigger: ACTTCTGGGATTTGAAAGCCAGAGTATCCAGAGGAA...CCTTCTCAGAGCACAATTAAGCTGGTAGCAACCAATATGATCGCCAATGGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR GCA 90 bp GGTCTGTGCACTTTCTCGTGTGATCATAAGTTGACCGTTTTACTTCCTGTAGATGGCTCTACTAACTCCTaGTCATCCATTCTGAAACAC +
Preference number: 2 (lower is better)
Translates to: GLCTFSCDHKLTVLLPVDGSTNS*SSILKH
Trigger: GTGTTTCAGAATGGATGAGCAGGAGTTAGTAGAGCC...ATCTACAGGAAGTAAAACGGTCAACTTATGATCACACGAGAAAGTGCACAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR CCA 90 bp ATTGACATCTCCAGGACTCTGATGCAGCCGTCATCAGATGCCAAGATCACCTTACAAAAGAAAGGAAACTaGTCAAGCTTGTCCATTCAA +
Preference number: 2 (lower is better)
Translates to: IDISRTLMQPSSDAKITLQKKGN*SSLSIQ
Trigger: TTGAATGGACAAGCTTGACCAGTTTCCTTTCTTTTG...TAAGGTGATCTTGGCATCTGATGACGGCTGCATCAGAGTCCTGGAGATGTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR GCA 90 bp ACAATGCATGCAACTGTTCTTGAAGGAGAGTCTTTATTTCTTCATTTTCTGGATGCAGGAGCTGGTCTGTaGACTTTCTCGTGTGATCAT +
Preference number: 2 (lower is better)
Translates to: TMHATVLEGESLFLHFLDAGAGL*TFSCDH
Trigger: ATGATCACACGAGAAAGTGCACAGACCAGCTCCTGC...ATCCAGAAAATGAAGAAATAAAGACTCTCCTTCAAGAACAGTTGCATGCATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR GCA 90 bp TACAAAGTTCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAAGAAGCCCCATCTCTTaGCACAGATTTCTTAAACAT +
Preference number: 2 (lower is better)
Translates to: YKVQQCLKQRIHHVLKKRRSPIS*HRFLKH
Trigger: ATGTTTAAGAAATCTGTGGCAAGAGATGGGGCTTCT...TCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGAACTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
3UTR CCA 72 bp CCAGCTCTGCATCGGAGACCACAGTCTGGCGGGCCATaGCCTCCCGGGTGGCAAGCTGCTTCTTTCTCAGGC +
Preference number: 3 (lower is better)
Translates to: PALHRRPQSGGP*PPGWQAASFSG
Trigger: GCCTGAGAAAGAAGCAGCTTGCCACCCGGGAGGCCATGGCCCGCCAGACTGTGGTCTCCGATGCAGAGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR GCA 72 bp CCCTTGACTTCACACGAGTGGACACTGAGCTCCTTGTaGAGCAGGCCACTGGTGAGGTGGTACACCAGGACA +
Preference number: 3 (lower is better)
Translates to: PLTSHEWTLSSL*SRPLVRWYTRT
Trigger: TGTCCTGGTGTACCACCTCACCAGTGGCCTGCTGCACAAGGAGCTCAGTGTCCACTCGTGTGAAGTCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR TCA 72 bp GAGAGAGGAGGACCAGGAGGGCCTTGGACTTCTGGTTaGCTTGTGGAGAACAAAGGTGGTCAACCCACCGCT +
Preference number: 3 (lower is better)
Translates to: ERGGPGGPWTSG*LVENKGGQPTA
Trigger: AGCGGTGGGTTGACCACCTTTGTTCTCCACAAGTCAACCAGAAGTCCAAGGCCCTCCTGGTCCTCCTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR GCA 72 bp GTGATTCGTCATTGCCCCGGTCACCACGGAAAGCAGTaGTCCTCCCTGTTGGGAGATCAACCAGCTGAAGTT +
Preference number: 3 (lower is better)
Translates to: VIRHCPGHHGKQ*SSLLGDQPAEV
Trigger: AACTTCAGCTGGTTGATCTCCCAACAGGGAGGAGCACTGCTTTCCGTGGTGACCGGGGCAATGACGAATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR CCA 72 bp CTTGTTTCCAACAGCAGCTGCACAGCTCTGTCTGTCTaGCCTAGCAGCAGGAGCTGGTCTGTGCACTTTCTC +
Preference number: 3 (lower is better)
Translates to: LVSNSSCTALSV*PSSRSWSVHFL
Trigger: GAGAAAGTGCACAGACCAGCTCCTGCTGCTAGGCCAGACAGACAGAGCTGTGCAGCTGCTGTTGGAAACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR CCA 72 bp GAGGACCAGGAGGGCCTTGGACTTCTGGTTGACTTGTaGAGAACAAAGGTGGTCAACCCACCGCTTCAGAAC +
Preference number: 3 (lower is better)
Translates to: EDQEGLGLLVDL*RTKVVNPPLQN
Trigger: GTTCTGAAGCGGTGGGTTGACCACCTTTGTTCTCCACAAGTCAACCAGAAGTCCAAGGCCCTCCTGGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR-3UTR CAA 90 bp CCCCAGACTTGGCCTGGGACAAGCTGTGCAGGTAGTGGGCCGCCACTGTCCAGACACCATCATTATACATaGCTATTAGCTTCTGGTTTC +
Preference number: 3 (lower is better)
Translates to: PQTWPGTSCAGSGPPLSRHHHYT*LLASGF
Trigger: GAAACCAGAAGCTAATAGCAATGTATAATGATGGTG...TCTGGACAGTGGCGGCCCACTACCTGCACAGCTTGTCCCAGGCCAAGTCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR GCA 72 bp AGCTCTATCGAAGTATCTCATGCTGTGAAGCGTCTCTaGCACGCTGACAAAGCAACCCAGAGAGAGGAGGAC +
Preference number: 3 (lower is better)
Translates to: SSIEVSHAVKRL*HADKATQREED
Trigger: GTCCTCCTCTCTCTGGGTTGCTTTGTCAGCGTGGCAGAGACGCTTCACAGCATGAGATACTTCGATAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136560.3
3UTR CCA 72 bp AAGCTTGTCCATTCAATACCCTTGACTTCACACGAGTaGACACTGAGCTCCTTGTGCAGCAGGCCACTGGTG +
Preference number: 3 (lower is better)
Translates to: KLVHSIPLTSHE*TLSSLCSRPLV
Trigger: CACCAGTGGCCTGCTGCACAAGGAGCTCAGTGTCCACTCGTGTGAAGTCAAGGGTATTGAATGGACAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR CCA 72 bp GGTGTTCTCACAGAGCACATCGTAGCAGATGTCCAATaGGTTGCTCAGCCTGTCCTTAGGAGCACCTTCCTT +
Preference number: 3 (lower is better)
Translates to: GVLTEHIVADVQ*VAQPVLRSTFL
Trigger: AAGGAAGGTGCTCCTAAGGACAGGCTGAGCAACCCATTGGACATCTGCTACGATGTGCTCTGTGAGAACACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR CAA 90 bp CCACTCGCCATACGTCTGCAGGTAGCGACAGGCGTCCGCAGCCTTGTCTATCAATCGTGTGATCATAAGTaGACCGTTTTACTTCCTGTA +
Preference number: 3 (lower is better)
Translates to: PLAIRLQVATGVRSLVYQSCDHK*TVLLPV
Trigger: TACAGGAAGTAAAACGGTCAACTTATGATCACACGA...TTGATAGACAAGGCTGCGGACGCCTGTCGCTACCTGCAGACGTATGGCGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR-3UTR CAA 90 bp GTAGTAGTGCTGGTTATCTGCACTTGTTTCCAACAGCAGCTGCACAGCTCTGTCACACCCTCTGCCAGCTaGCCATTGGCGATCATATTG +
Preference number: 3 (lower is better)
Translates to: VVVLVICTCFQQQLHSSVTPSAS*PLAIIL
Trigger: CAATATGATCGCCAATGGCAAGCTGGCAGAGGGTGT...GACAGAGCTGTGCAGCTGCTGTTGGAAACAAGTGCAGATAACCAGCACTACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR-3UTR CAA 90 bp CTGATGCAGCCGTCATCAGATGCCAAGATCACCTTATCTGATGTGCACCAGTCCGCCTTGGACTTCTGGTaGACTTGTGGAGAACAAAGG +
Preference number: 3 (lower is better)
Translates to: LMQPSSDAKITLSDVHQSALDFW*TCGEQR
Trigger: CCTTTGTTCTCCACAAGTCAACCAGAAGTCCAAGGC...GGACTGGTGCACATCAGATAAGGTGATCTTGGCATCTGATGACGGCTGCATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR CAA 90 bp CCCACCGCTTCAGAACATCTGCACATTCTTCAGAATTTAACCGAACCTTTGCAATGGACACTGAGCTCCTaGTGCAGCAGGCCACTGGTG +
Preference number: 3 (lower is better)
Translates to: PTASEHLHILQNLTEPLQWTLSS*CSRPLV
Trigger: CACCAGTGGCCTGCTGCACAAGGAGCTCAGTGTCCA...TTGCAAAGGTTCGGTTAAATTCTGAAGAATGTGCAGATGTTCTGAAGCGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR TCA 72 bp GGTTGCTACCAGCTTAATTGTGCTCTGAGAAGGGCCTaGAGAGGTGACAGTGGTGACCAAGCAAGCTTTCAG +
Preference number: 3 (lower is better)
Translates to: GCYQLNCALRRA*RGDSGDQASFQ
Trigger: CTGAAAGCTTGCTTGGTCACCACTGTCACCTCTTCAGGCCCTTCTCAGAGCACAATTAAGCTGGTAGCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR-3UTR CAA 90 bp AGCAGAGTAACTGAACACCCTCTGCCAGCTTGCCATTGGCGATCATATTGGTTGGCTGGTTATCTGCACTaGTTTCCAACAGCAGCTGCA +
Preference number: 3 (lower is better)
Translates to: SRVTEHPLPACHWRSYWLAGYLH*FPTAAA
Trigger: TGCAGCTGCTGTTGGAAACAAGTGCAGATAACCAGC...CAACCAATATGATCGCCAATGGCAAGCTGGCAGAGGGTGTTCAGTTACTCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR TCA 72 bp GCGATCATATTGGTTGCTACCAGCTTAATTGTGCTCTaGGAAGGGCCTGAAGAGGTGACAGTGGTGACCAAG +
Preference number: 3 (lower is better)
Translates to: AIILVATSLIVL*EGPEEVTVVTK
Trigger: CTTGGTCACCACTGTCACCTCTTCAGGCCCTTCTCAGAGCACAATTAAGCTGGTAGCAACCAATATGATCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR TCA 72 bp GATGCAGCCGTCATCAGATGCCAAGATCACCTTATCTaGTGTGCACCAGTCCACATCCAAAATCCGGAAGGT +
Preference number: 3 (lower is better)
Translates to: DAAVIRCQDHLI*CAPVHIQNPEG
Trigger: ACCTTCCGGATTTTGGATGTGGACTGGTGCACATCAGATAAGGTGATCTTGGCATCTGATGACGGCTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR CAA 90 bp CACACTTCAGCACCATCATTATACATTGCTATTAGCTTCTGGTTTCCCTTGCCGCAGTGCTCCTCCCTGTaGGGAGATCAACCAGCTGAA +
Preference number: 3 (lower is better)
Translates to: HTSAPSLYIAISFWFPLPQCSSL*GDQPAE
Trigger: TTCAGCTGGTTGATCTCCCAACAGGGAGGAGCACTG...CGGCAAGGGAAACCAGAAGCTAATAGCAATGTATAATGATGGTGCTGAAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR CCA 72 bp GGGCAAAGCGAATCTTCCTCACCCAACTTCTATGTGTaGGTATTCCTCTGGATACTCTGGCTTTCAAATCCC +
Preference number: 3 (lower is better)
Translates to: GQSESSSPNFYV*VFLWILWLSNP
Trigger: GGGATTTGAAAGCCAGAGTATCCAGAGGAATACCCACACATAGAAGTTGGGTGAGGAAGATTCGCTTTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR CAA 90 bp TCAGAACATCTGCACATTCTTCAGAATTTAACCGAACCTTTGCAAGCCATGCCGGCTGGTTATCTGCACTaGTTTCCAACAGCAGCTGCA +
Preference number: 3 (lower is better)
Translates to: SEHLHILQNLTEPLQAMPAGYLH*FPTAAA
Trigger: TGCAGCTGCTGTTGGAAACAAGTGCAGATAACCAGC...CGGCATGGCTTGCAAAGGTTCGGTTAAATTCTGAAGAATGTGCAGATGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
3UTR-3UTR CAA 90 bp CTTGCCATTGGCGATCATATTGGTTGCTACCAGCTTAATTGTGCTCTGAGAAGGGTCCATTCAATACCCTaGACTTCACACGAGTGGACA +
Preference number: 3 (lower is better)
Translates to: LAIGDHIGCYQLNCALRRVHSIP*TSHEWT
Trigger: TGTCCACTCGTGTGAAGTCAAGGGTATTGAATGGAC...CCTTCTCAGAGCACAATTAAGCTGGTAGCAACCAATATGATCGCCAATGGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR TCA 72 bp GGTTGGTCAAATGCTTCTGCCCTGCTGTGTCCTAAATaGCTGCTTATCAACACAGGCACACACAGCACATAT +
Preference number: 3 (lower is better)
Translates to: GWSNASALLCPK*LLINTGTHSTY
Trigger: ATATGTGCTGTGTGTGCCTGTGTTGATAAGCAGTCATTTAGGACACAGCAGGGCAGAAGCATTTGACCAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
3UTR TCA 72 bp AAAGCAGTGCTCCTCCCTGTTGGGAGATCAACCAGCTaGAGTTCATTTCTTACTAACCCCATGTTGTTTGGG +
Preference number: 3 (lower is better)
Translates to: KAVLLPVGRSTS*SSFLTNPMLFG
Trigger: CCCAAACAACATGGGGTTAGTAAGAAATGAACTTCAGCTGGTTGATCTCCCAACAGGGAGGAGCACTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR GCA 72 bp CATCATTATACATTGCTATTAGCTTCTGGTTTCCCTTaGCGGGGGCAAAGCGAATCTTCCTCACCCAACTTC +
Preference number: 3 (lower is better)
Translates to: HHYTLLLASGFP*RGQSESSSPNF
Trigger: GAAGTTGGGTGAGGAAGATTCGCTTTGCCCCCGGCAAGGGAAACCAGAAGCTAATAGCAATGTATAATGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR CCA 72 bp ACTTCAGCACCATCATTATACATTGCTATTAGCTTCTaGTTTCCCTTGCCGGGGGCAAAGCGAATCTTCCTC +
Preference number: 3 (lower is better)
Translates to: TSAPSLYIAISF*FPLPGAKRIFL
Trigger: GAGGAAGATTCGCTTTGCCCCCGGCAAGGGAAACCAGAAGCTAATAGCAATGTATAATGATGGTGCTGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR CAA 90 bp TTGGCCATCATTGTCAGTAAACACAAAATGCTCCCGAGCAGAGATGTTCTGACTTCGTGTGATCATAAGTaGACCGTTTTACTTCCTGTA +
Preference number: 3 (lower is better)
Translates to: LAIIVSKHKMLPSRDVLTSCDHK*TVLLPV
Trigger: TACAGGAAGTAAAACGGTCAACTTATGATCACACGA...AGTCAGAACATCTCTGCTCGGGAGCATTTTGTGTTTACTGACAATGATGGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR TCA 72 bp AAACAACTGCCAAATACTGTTTCAGATGAGACACTTTaGTCATTTCAATGGGTGATTCGTCATTGCCCCGGT +
Preference number: 3 (lower is better)
Translates to: KQLPNTVSDETL*SFQWVIRHCPG
Trigger: ACCGGGGCAATGACGAATCACCCATTGAAATGATCAAAGTGTCTCATCTGAAACAGTATTTGGCAGTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR CCA 72 bp TCTTCCTCACCCAACTTCTATGTGTGGGTATTCCTCTaGATACTCTGGCTTTCAAATCCCAGAAGTTTAAAT +
Preference number: 3 (lower is better)
Translates to: SSSPNFYVWVFL*ILWLSNPRSLN
Trigger: ATTTAAACTTCTGGGATTTGAAAGCCAGAGTATCCAGAGGAATACCCACACATAGAAGTTGGGTGAGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR-3UTR CAA 90 bp CTATGTGTGGGTATTCCTCTGGATACTCTGGCTTTCAAATCCCAGAAGTTTAAATCCAGGGGCTTATCTTaGAAAACAACTGCCAAATAC +
Preference number: 3 (lower is better)
Translates to: LCVGIPLDTLAFKSQKFKSRGLS*KTTAKY
Trigger: GTATTTGGCAGTTGTTTTCAAAGATAAGCCCCTGGA...TTTAAACTTCTGGGATTTGAAAGCCAGAGTATCCAGAGGAATACCCACACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR CCA 90 bp TGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGGTCAGCTCTCCTCACCCCTCGGAGACCACAGTCTaGCGGGCCATGGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: WTDHSCDQEHSQVSSPHPSETTV*RAMASR
Trigger: CCGGGAGGCCATGGCCCGCCAGACTGTGGTCTCCGA...GGGGTGAGGAGAGCTGACCTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp AGCAGCTGCACAGCTCTGTCTGTCTGGCCTAGCAGCAGGAGCTGGTCTGTGCACGCGGCCAGCTTGTTATaGGCTGGGCTGGAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SSCTALSVWPSSRSWSVHAASLL*AGLECG
Trigger: CCCACACTCCAGCCCAGCTCATAACAAGCTGGCCGC...GTGCACAGACCAGCTCCTGCTGCTAGGCCAGACAGACAGAGCTGTGCAGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR TCA 90 bp CAAGCCCTCACGCAGGTCTGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGAGGGGAAGGGAGTCCTaGGAGCAGTCCCGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QALTQVWTDHSCDQEHSQRGRES*EQSRQQ
Trigger: CTGCTGACGGGACTGCTCTCAGGACTCCCTTCCCCT...CTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCAGACCTGCGTGAGGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp CAGGTCTGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGGTCAGCTCTCCTGCAGCAGGCCACTGGTaGGGTGGTACACCAGGACAG +
Preference number: 4 (lower is better)
Translates to: QVWTDHSCDQEHSQVSSPAAGHW*GGTPGQ
Trigger: CTGTCCTGGTGTACCACCTCACCAGTGGCCTGCTGC...AGGAGAGCTGACCTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCAGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp CAGGAGCACAGCCAGGTCAGCTCTCCTCACCCCTCGCTTCCGACATCAGATTCCCTTGGCTCCCGTGGCTaGGGCCAGCTTGTTATGAGC +
Preference number: 4 (lower is better)
Translates to: QEHSQVSSPHPSLPTSDSLGSRG*GQLVMS
Trigger: GCTCATAACAAGCTGGCCGCAGCCACGGGAGCCAAG...GGAATCTGATGTCGGAAGCGAGGGGTGAGGAGAGCTGACCTGGCTGTGCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp AGCAGCTGCACAGCTCTGTCTGTCTGGCCTAGCAGCAGGAGCTGGTCTGTGCACTCTCGGGAAGCGTCCTaGTTCCACAGCCACTGCACA +
Preference number: 4 (lower is better)
Translates to: SSCTALSVWPSSRSWSVHSREAS*FHSHCT
Trigger: TGTGCAGTGGCTGTGGAATCAGGACGCTTCCCGAGA...GTGCACAGACCAGCTCCTGCTGCTAGGCCAGACAGACAGAGCTGTGCAGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR GCA 90 bp CAAGCCATGCCGCCCGATTCCACTCGCCATACGTCTGCAGGTAGCGACAGGCGTACGAGCAGGCACCTCTaGAAGAGAGAGAAGTCGGGA +
Preference number: 4 (lower is better)
Translates to: QAMPPDSTRHTSAGSDRRTSRHL*KREKSG
Trigger: TCCCGACTTCTCTCTCTTGCAGAGGTGCCTGCTCGT...ACGCCTGTCGCTACCTGCAGACGTATGGCGAGTGGAATCGGGCGGCATGGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136560.3
CDS-3UTR GCA 90 bp CAGGAGCACAGCCAGGTCAGCTCTCCTCACCCCTCGCTTCCGACATCAGATTCCAACCTTTGCAAGCCATaGCGCCCGATTCCACTCGCC +
Preference number: 4 (lower is better)
Translates to: QEHSQVSSPHPSLPTSDSNLCKP*RPIPLA
Trigger: GGCGAGTGGAATCGGGCGGCATGGCTTGCAAAGGTT...GGAATCTGATGTCGGAAGCGAGGGGTGAGGAGAGCTGACCTGGCTGTGCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp TGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGGTCAGCTCTCCTCACCCCAGGCCACTGGTGAGGTaGTACACCAGGACAGAACCG +
Preference number: 4 (lower is better)
Translates to: WTDHSCDQEHSQVSSPHPRPLVR*YTRTEP
Trigger: CGGTTCTGTCCTGGTGTACCACCTCACCAGTGGCCT...GGGGTGAGGAGAGCTGACCTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp CCCATTTTGAGGTCACCTGGGACACAGAACTGGCTCCTAGTGTATGGGCCTATGCAGTCTGGCGGGCCATaGCCTCCCGGGTGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: PILRSPGTQNWLLVYGPMQSGGP*PPGWQA
Trigger: AGCTTGCCACCCGGGAGGCCATGGCCCGCCAGACTG...CATAGGCCCATACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp TGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGGTCAGCTCTCCTCACCCCCACCACGGAAAGCAGTaGTCCTCCCTGTTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: WTDHSCDQEHSQVSSPHPHHGKQ*SSLLGD
Trigger: ATCTCCCAACAGGGAGGAGCACTGCTTTCCGTGGTG...GGGGTGAGGAGAGCTGACCTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp AACCTTTGCAAGCCATGCCGCCCGATTCCACTCGCCATACGTCTGCAGGTAGCGCCTTCTTGGCTCCCGTaGCTGCGGCCAGCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: NLCKPCRPIPLAIRLQVAPSWLP*LRPACY
Trigger: ATAACAAGCTGGCCGCAGCCACGGGAGCCAAGAAGG...CGCTACCTGCAGACGTATGGCGAGTGGAATCGGGCGGCATGGCTTGCAAAGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR CCA 90 bp AAGGGCCAAGCCCTCACGCAGGTCTGGACTGACCATAGCTGTGACCAGGAGCACGTGGGCACATTCGGATaGCAAACTGAGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: KGQALTQVWTDHSCDQEHVGTFG*QTEGKG
Trigger: TCCCTTCCCCTCAGTTTGCCATCCGAATGTGCCCAC...GTGCTCCTGGTCACAGCTATGGTCAGTCCAGACCTGCGTGAGGGCTTGGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp CAGGAGCACAGCCAGGTCAGCTCTCCTCACCCCTCGCTTCCGACATCAGATTCCCGTAGATGGCAGCAATaGGCTTCTCTGTGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: QEHSQVSSPHPSLPTSDSRRWQQ*ASLCPH
Trigger: GTGAGGACACAGAGAAGCTCATTGCTGCCATCTACG...GGAATCTGATGTCGGAAGCGAGGGGTGAGGAGAGCTGACCTGGCTGTGCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp CAGGTCTGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGGTCAGCTCTCCTTCCCGGGTGGCAAGCTaGTTCTTTCTCAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: QVWTDHSCDQEHSQVSSPSRVAS*FFLRLF
Trigger: GAAGAGCCTGAGAAAGAAGCAGCTTGCCACCCGGGA...AGGAGAGCTGACCTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCAGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp TGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGGTCAGCTCTCCTCACCCCTCTTGGATCTCACACTaGGCTACTCCGGCTGCTACA +
Preference number: 4 (lower is better)
Translates to: WTDHSCDQEHSQVSSPHPSWISH*ATPAAT
Trigger: TGTAGCAGCCGGAGTAGCCCAGTGTGAGATCCAAGA...GGGGTGAGGAGAGCTGACCTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp AAGGGCCAAGCCCTCACGCAGGTCTGGACTGACCATAGCTGTGACCAGGAGCACTGTTATGAGCTGGGCTaGAGTGTGGGCTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: KGQALTQVWTDHSCDQEHCYELG*SVGWRC
Trigger: ACATCTCCAGCCCACACTCCAGCCCAGCTCATAACA...GTGCTCCTGGTCACAGCTATGGTCAGTCCAGACCTGCGTGAGGGCTTGGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp AGCAGCTGCACAGCTCTGTCTGTCTGGCCTAGCAGCAGGAGCTGGTCTGTGCACTGTTATGAGCTGGGCTaGAGTGTGGGCTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: SSCTALSVWPSSRSWSVHCYELG*SVGWRC
Trigger: ACATCTCCAGCCCACACTCCAGCCCAGCTCATAACA...GTGCACAGACCAGCTCCTGCTGCTAGGCCAGACAGACAGAGCTGTGCAGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR CCA 90 bp CAGGAGCACAGCCAGGTCAGCTCTCCTCACCCCTCGCTTCCGACATCAGATTCCAGTGCTCCTCCCTGTTaGGAGATCAACCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: QEHSQVSSPHPSLPTSDSSAPPC*EINQLK
Trigger: CTTCAGCTGGTTGATCTCCCAACAGGGAGGAGCACT...GGAATCTGATGTCGGAAGCGAGGGGTGAGGAGAGCTGACCTGGCTGTGCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp TGTCCCCATTTTGAGGTCACCTGGGACACAGAACTGGCTCCTAGTGTATGGGCCGCTCTGAGAAGGGCCTaGAGAGGTGACAGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: CPHFEVTWDTELAPSVWAALRRA*RGDSGD
Trigger: GTCACCACTGTCACCTCTTCAGGCCCTTCTCAGAGC...GGCCCATACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp TGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGGTCAGCTCTCCTCACCCCAGCTTAATTGTGCTCTaGGAAGGGCCTGAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: WTDHSCDQEHSQVSSPHPSLIVL*EGPEEV
Trigger: CACCTCTTCAGGCCCTTCTCAGAGCACAATTAAGCT...GGGGTGAGGAGAGCTGACCTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp CCACTCGCCATACGTCTGCAGGTAGCGACAGGCGTCCGCAGCCTTGTCTATCAATGGATGGGCTTCACGTaGTCTTGGATCTCACACTGG +
Preference number: 4 (lower is better)
Translates to: PLAIRLQVATGVRSLVYQWMGFT*SWISHW
Trigger: CCAGTGTGAGATCCAAGAGCACGTGAAGCCCATCCA...TTGATAGACAAGGCTGCGGACGCCTGTCGCTACCTGCAGACGTATGGCGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR CCA 90 bp CAGGTCTGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGGTCAGCTCTCCTGGCTTCACGTGCTCTTaGATCTCACACTGGGCTACT +
Preference number: 4 (lower is better)
Translates to: QVWTDHSCDQEHSQVSSPGFTCS*ISHWAT
Trigger: AGTAGCCCAGTGTGAGATCCAAGAGCACGTGAAGCC...AGGAGAGCTGACCTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCAGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
3UTR CAA 72 bp ATACCCTTGACTTCACACGAGTGGACACTGAGCTCCTaGTGCAGCAGGCCACTGGTGAGGTGGTACACCAGG +
Preference number: 4 (lower is better)
Translates to: IPLTSHEWTLSS*CSRPLVRWYTR
Trigger: CCTGGTGTACCACCTCACCAGTGGCCTGCTGCACAAGGAGCTCAGTGTCCACTCGTGTGAAGTCAAGGGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR TCA 90 bp CAGAGAGTCGCAGTAGTAGTGCTGGTTATCTGCACTTGTTTCCAACAGCAGCTGAGGGGAAGGGAGTCCTaGGAGCAGTCCCGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QRVAVVVLVICTCFQQQLRGRES*EQSRQQ
Trigger: CTGCTGACGGGACTGCTCTCAGGACTCCCTTCCCCT...CAGCTGCTGTTGGAAACAAGTGCAGATAACCAGCACTACTACTGCGACTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR TCA 90 bp CAAGCCCTCACGCAGGTCTGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGCCTTGGACTTCTGGTTaGCTTGTGGAGAACAAAGGT +
Preference number: 4 (lower is better)
Translates to: QALTQVWTDHSCDQEHSQPWTSG*LVENKG
Trigger: ACCTTTGTTCTCCACAAGTCAACCAGAAGTCCAAGG...CTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCAGACCTGCGTGAGGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp AAGGGCCAAGCCCTCACGCAGGTCTGGACTGACCATAGCTGTGACCAGGAGCACCAAATGCACCGTACTTaGGACAGGCTTCCACAAACA +
Preference number: 4 (lower is better)
Translates to: KGQALTQVWTDHSCDQEHQMHRT*DRLPQT
Trigger: TGTTTGTGGAAGCCTGTCTCAAGTACGGTGCATTTG...GTGCTCCTGGTCACAGCTATGGTCAGTCCAGACCTGCGTGAGGGCTTGGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp CAGGTCTGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGGTCAGCTCTCCTTCTTCCACAGCTTGGTaGCTGTGTCTGCATTCCACA +
Preference number: 4 (lower is better)
Translates to: QVWTDHSCDQEHSQVSSPSSTAW*LCLHST
Trigger: TGTGGAATGCAGACACAGGCACCAAGCTGTGGAAGA...AGGAGAGCTGACCTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCAGACCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp GTGCTGGTTATCTGCACTTGTTTCCAACAGCAGCTGCACAGCTCTGTCTGTCTGCTTGGCTCCCGTGGCTaGGGCCAGCTTGTTATGAGC +
Preference number: 4 (lower is better)
Translates to: VLVICTCFQQQLHSSVCLLGSRG*GQLVMS
Trigger: GCTCATAACAAGCTGGCCGCAGCCACGGGAGCCAAG...CAGACAGACAGAGCTGTGCAGCTGCTGTTGGAAACAAGTGCAGATAACCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR GCA 90 bp TGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGGTCAGCTCTCCTCACCCCCTCACTGACTTCAAATaGACCGTACTTGAGACAGGC +
Preference number: 4 (lower is better)
Translates to: WTDHSCDQEHSQVSSPHPLTDFK*TVLETG
Trigger: GCCTGTCTCAAGTACGGTGCATTTGAAGTCAGTGAG...GGGGTGAGGAGAGCTGACCTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp CCCATTTTGAGGTCACCTGGGACACAGAACTGGCTCCTAGTGTATGGGCCTATGCCTTCTTGGCTCCCGTaGCTGCGGCCAGCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: PILRSPGTQNWLLVYGPMPSWLP*LRPACY
Trigger: ATAACAAGCTGGCCGCAGCCACGGGAGCCAAGAAGG...CATAGGCCCATACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp AAGGGCCAAGCCCTCACGCAGGTCTGGACTGACCATAGCTGTGACCAGGAGCACCATGCTACCATCTGGTaGAATCCGAGCACTGTCTTT +
Preference number: 4 (lower is better)
Translates to: KGQALTQVWTDHSCDQEHHATIW*NPSTVF
Trigger: AAAGACAGTGCTCGGATTCCACCAGATGGTAGCATG...GTGCTCCTGGTCACAGCTATGGTCAGTCCAGACCTGCGTGAGGGCTTGGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp GAGCACATCGTAGCAGATGTCCAATGGGTTGCTCAGCCTGTCCTTAGGAGCACCGACAGCACACCATACTaGAGGGACGGACAGTTTTCG +
Preference number: 4 (lower is better)
Translates to: EHIVADVQWVAQPVLRSTDSTPY*RDGQFS
Trigger: CGAAAACTGTCCGTCCCTTCAGTATGGTGTGCTGTC...GGTGCTCCTAAGGACAGGCTGAGCAACCCATTGGACATCTGCTACGATGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR GCA 90 bp TGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGGTCAGCTCTCCTCACCCCGCCTGTTCTCTCGATTaGAATCACACCAACTGTTTG +
Preference number: 4 (lower is better)
Translates to: WTDHSCDQEHSQVSSPHPACSLD*NHTNCL
Trigger: CAAACAGTTGGTGTGATTGCAATCGAGAGAACAGGC...GGGGTGAGGAGAGCTGACCTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp CAGGAGCACAGCCAGGTCAGCTCTCCTCACCCCTCGCTTCCGACATCAGATTCCCCAGCAATTGCACTCTaGCCGATCATATTATCTAGG +
Preference number: 4 (lower is better)
Translates to: QEHSQVSSPHPSLPTSDSPAIAL*PIILSR
Trigger: CCTAGATAATATGATCGGGCAGAGTGCAATTGCTGG...GGAATCTGATGTCGGAAGCGAGGGGTGAGGAGAGCTGACCTGGCTGTGCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp TGTCCCCATTTTGAGGTCACCTGGGACACAGAACTGGCTCCTAGTGTATGGGCCTTGAGGTGCACTTCCTaGAGAATGGAGCCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: CPHFEVTWDTELAPSVWALRCTS*RMEPLG
Trigger: CCCCAAAGGCTCCATTCTGCAGGAAGTGCACCTCAA...GGCCCATACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp CAGGAGCACAGCCAGGTCAGCTCTCCTCACCCCTCGCTTCCGACATCAGATTCCGTAGTGCTGGTTATCTaGACTTGTTTCCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: QEHSQVSSPHPSLPTSDSVVLVI*TCFQQQ
Trigger: CTGCTGTTGGAAACAAGTGCAGATAACCAGCACTAC...GGAATCTGATGTCGGAAGCGAGGGGTGAGGAGAGCTGACCTGGCTGTGCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp TGTCCCCATTTTGAGGTCACCTGGGACACAGAACTGGCTCCTAGTGTATGGGCCAGCTGGGCTGGAGTGTaGGCTGGAGATGTACACTTT +
Preference number: 4 (lower is better)
Translates to: CPHFEVTWDTELAPSVWASWAGV*AGDVHF
Trigger: AAAGTGTACATCTCCAGCCCACACTCCAGCCCAGCT...GGCCCATACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp CAGGTCTGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGGTCAGCTCTCCTATCTCGCTGAGAGCATaGTATTACCTGCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: QVWTDHSCDQEHSQVSSPISLRA*YYLQKG
Trigger: CCCTTTCTGCAGGTAATACCATGCTCTCAGCGAGAT...AGGAGAGCTGACCTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCAGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp CAGGAGCACAGCCAGGTCAGCTCTCCTCACCCCTCGCTTCCGACATCAGATTCCCCCAACTTCTATGTGTaGGTATTCCTCTGGATACTC +
Preference number: 4 (lower is better)
Translates to: QEHSQVSSPHPSLPTSDSPNFYV*VFLWIL
Trigger: GAGTATCCAGAGGAATACCCACACATAGAAGTTGGG...GGAATCTGATGTCGGAAGCGAGGGGTGAGGAGAGCTGACCTGGCTGTGCTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp CAGGTCTGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGGTCAGCTCTCCTGATCACTACCACCAGTaGATGGCATCCATATGCAAT +
Preference number: 4 (lower is better)
Translates to: QVWTDHSCDQEHSQVSSPDHYHQ*MASICN
Trigger: ATTGCATATGGATGCCATTCACTGGTGGTAGTGATC...AGGAGAGCTGACCTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCAGACCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp ACTATGTGTCCCCATTTTGAGGTCACCTGGGACACAGAACTGGCTCCTAGTGTATCTCGGGAAGCGTCCTaGTTCCACAGCCACTGCACA +
Preference number: 4 (lower is better)
Translates to: TMCPHFEVTWDTELAPSVSREAS*FHSHCT
Trigger: TGTGCAGTGGCTGTGGAATCAGGACGCTTCCCGAGA...TACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGGGACACATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp TGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAGGTGCTGTGGTTGGTGCGGCCAGCTTGTTATaGGCTGGGCTGGAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: CLKQRIHHVLKKRGAVVGAASLL*AGLECG
Trigger: CCCACACTCCAGCCCAGCTCATAACAAGCTGGCCGC...ACCAACCACAGCACCTCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp TGTCCCCATTTTGAGGTCACCTGGGACACAGAACTGGCTCCTAGTGTATGGGCCCAGTTTTCGTCACCCTaGTTGCATCACACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: CPHFEVTWDTELAPSVWAQFSSP*LHHTGF
Trigger: GAAGCCAGTGTGATGCAATCAGGGTGACGAAAACTG...GGCCCATACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp CAGGTCTGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGGTCAGCTCTCCTGGCTCTACTAACTCCTaGTCATCCATTCTGAAACAC +
Preference number: 4 (lower is better)
Translates to: QVWTDHSCDQEHSQVSSPGSTNS*SSILKH
Trigger: GTGTTTCAGAATGGATGAGCAGGAGTTAGTAGAGCC...AGGAGAGCTGACCTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCAGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp CAGGTCTGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGGTCAGCTCTCCTGAGTTTGGGCAGTATTaGAATCGATCACTACCACCA +
Preference number: 4 (lower is better)
Translates to: QVWTDHSCDQEHSQVSSPEFGQY*NRSLPP
Trigger: TGGTGGTAGTGATCGATTCCAATACTGCCCAAACTC...AGGAGAGCTGACCTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCAGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp GGCCTAGCAGCAGGAGCTGGTCTGTGCACTTTCTCGTGTGATCATAAGTTGACCCAGTTTTCGTCACCCTaGTTGCATCACACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GLAAGAGLCTFSCDHKLTQFSSP*LHHTGF
Trigger: GAAGCCAGTGTGATGCAATCAGGGTGACGAAAACTG...GGTCAACTTATGATCACACGAGAAAGTGCACAGACCAGCTCCTGCTGCTAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR TCA 90 bp CAGGTCTGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGGTCAGCTCTCCTGGGAGATCAACCAGCTaGAGTTCATTTCTTACTAAC +
Preference number: 4 (lower is better)
Translates to: QVWTDHSCDQEHSQVSSPGRSTS*SSFLTN
Trigger: GTTAGTAAGAAATGAACTTCAGCTGGTTGATCTCCC...AGGAGAGCTGACCTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCAGACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp TGTCCCCATTTTGAGGTCACCTGGGACACAGAACTGGCTCCTAGTGTATGGGCCCAGAGATGTTCTGACTaGGTTCAGCCTTACTCTCTG +
Preference number: 4 (lower is better)
Translates to: CPHFEVTWDTELAPSVWAQRCSD*VQPYSL
Trigger: CAGAGAGTAAGGCTGAACTCAGTCAGAACATCTCTG...GGCCCATACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp CCCATTTTGAGGTCACCTGGGACACAGAACTGGCTCCTAGTGTATGGGCCTATGGCAGGAGCTGGTCTGTaGACTTTCTCGTGTGATCAT +
Preference number: 4 (lower is better)
Translates to: PILRSPGTQNWLLVYGPMAGAGL*TFSCDH
Trigger: ATGATCACACGAGAAAGTGCACAGACCAGCTCCTGC...CATAGGCCCATACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp GCAGGTAATACTGCCCATGCTACCATCTGGTGGAATCCGAGCACTGTCTTTCACCCAGCAATTGCACTCTaGCCTGTTCCGTGCATTTCG +
Preference number: 4 (lower is better)
Translates to: AGNTAHATIWWNPSTVFHPAIAL*PVPCIS
Trigger: CGAAATGCACGGAACAGGGCAGAGTGCAATTGCTGG...GTGAAAGACAGTGCTCGGATTCCACCAGATGGTAGCATGGGCAGTATTACCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR CCA 90 bp CTGATGCAGCCGTCATCAGATGCCAAGATCACCTTATCTGATGTGCACCAGTCCCAAGCGCAGGCAGTATaGAGAGCCGATGTTATGGTG +
Preference number: 4 (lower is better)
Translates to: LMQPSSDAKITLSDVHQSQAQAV*RADVMV
Trigger: CACCATAACATCGGCTCTCCATACTGCCTGCGCTTG...GGACTGGTGCACATCAGATAAGGTGATCTTGGCATCTGATGACGGCTGCATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR CCA 90 bp CCCATTTTGAGGTCACCTGGGACACAGAACTGGCTCCTAGTGTATGGGCCTATGGCACTTCCTGCAGAATaGAGCCTTTGGGGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: PILRSPGTQNWLLVYGPMALPAE*SLWGVL
Trigger: AAGAACACCCCAAAGGCTCCATTCTGCAGGAAGTGC...CATAGGCCCATACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp CCCATTTTGAGGTCACCTGGGACACAGAACTGGCTCCTAGTGTATGGGCCTATGCCGTTAGCTCTTCCTTaGTGGACCCAAGCTCATTCA +
Preference number: 4 (lower is better)
Translates to: PILRSPGTQNWLLVYGPMPLALP*WTQAHS
Trigger: TGAATGAGCTTGGGTCCACCAAGGAAGAGCTAACGG...CATAGGCCCATACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp GGCAAAGCGAATCTTCCTCACCCAACTTCTATGTGTGGGTATTCCTCTGGATACATTCGGATGGCAAACTaGGGGGAAGGGAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: GKANLPHPTSMCGYSSGYIRMAN*GEGSPE
Trigger: CTCAGGACTCCCTTCCCCTCAGTTTGCCATCCGAAT...GTATCCAGAGGAATACCCACACATAGAAGTTGGGTGAGGAAGATTCGCTTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR GCA 90 bp TGTCCCCATTTTGAGGTCACCTGGGACACAGAACTGGCTCCTAGTGTATGGGCCTTCTTCCCCAGCAATTaGACTCTGCCCGATCATATT +
Preference number: 4 (lower is better)
Translates to: CPHFEVTWDTELAPSVWAFFPSN*TLPDHI
Trigger: AATATGATCGGGCAGAGTGCAATTGCTGGGGAAGAA...GGCCCATACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp ATTCTTCAGAATTTAACCGAACCTTTGCAAGCCATGCCGCCCGATTCCACTCGCTTGAGGTGCACTTCCTaGAGAATGGAGCCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: ILQNLTEPLQAMPPDSTRLRCTS*RMEPLG
Trigger: CCCCAAAGGCTCCATTCTGCAGGAAGTGCACCTCAA...GCGAGTGGAATCGGGCGGCATGGCTTGCAAAGGTTCGGTTAAATTCTGAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR GCA 90 bp TGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAGGTGCTGTGGTTGGTGCCACTGTCCAGAAGTaGAGCTCCGATTCATCGCCG +
Preference number: 4 (lower is better)
Translates to: CLKQRIHHVLKKRGAVVGATVQK*SSDSSP
Trigger: CGGCGATGAATCGGAGCTGCACTTCTGGACAGTGGC...ACCAACCACAGCACCTCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp ACTATGTGTCCCCATTTTGAGGTCACCTGGGACACAGAACTGGCTCCTAGTGTACACCCTCTGCCAGCTTaGCATTGGCGATCATATTGG +
Preference number: 4 (lower is better)
Translates to: TMCPHFEVTWDTELAPSVHPLPA*HWRSYW
Trigger: CCAATATGATCGCCAATGGCAAGCTGGCAGAGGGTG...TACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGGGACACATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp TGTCCCCATTTTGAGGTCACCTGGGACACAGAACTGGCTCCTAGTGTATGGGCCCTTCTGGTTGACTTGTaGAGAACAAAGGTGGTCAAC +
Preference number: 4 (lower is better)
Translates to: CPHFEVTWDTELAPSVWALLVDL*RTKVVN
Trigger: GTTGACCACCTTTGTTCTCCACAAGTCAACCAGAAG...GGCCCATACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp CCCATTTTGAGGTCACCTGGGACACAGAACTGGCTCCTAGTGTATGGGCCTATGACACGTAGACTTCATTaGCATCTCCAGGACTCTGAT +
Preference number: 4 (lower is better)
Translates to: PILRSPGTQNWLLVYGPMTRRLH*HLQDSD
Trigger: ATCAGAGTCCTGGAGATGTCAATGAAGTCTACGTGT...CATAGGCCCATACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp ATACAAAGTTCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGACCGCCGCCTTGTTGTaGGCGTTGAGAGCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: IQSSAMSKAKNPPRPQEKTAALL*ALRAPV
Trigger: CACCGGGGCTCTCAACGCGCACAACAAGGCGGCGGT...CTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGAACTTTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp AGTAGTAGTGCTGGTTATCTGCACTTGTTTCCAACAGCAGCTGCACAGCTCTGTGGCTTCACGTGCTCTTaGATCTCACACTGGGCTACT +
Preference number: 4 (lower is better)
Translates to: SSSAGYLHLFPTAAAQLCGFTCS*ISHWAT
Trigger: AGTAGCCCAGTGTGAGATCCAAGAGCACGTGAAGCC...ACAGAGCTGTGCAGCTGCTGTTGGAAACAAGTGCAGATAACCAGCACTACTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR CCA 90 bp GGCAAAGCGAATCTTCCTCACCCAACTTCTATGTGTGGGTATTCCTCTGGATACAGCTGGGCTGGAGTGTaGGCTGGAGATGTACACTTT +
Preference number: 4 (lower is better)
Translates to: GKANLPHPTSMCGYSSGYSWAGV*AGDVHF
Trigger: AAAGTGTACATCTCCAGCCCACACTCCAGCCCAGCT...GTATCCAGAGGAATACCCACACATAGAAGTTGGGTGAGGAAGATTCGCTTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR CCA 90 bp TGTCCCCATTTTGAGGTCACCTGGGACACAGAACTGGCTCCTAGTGTATGGGCCTTCCTCTGGATACTCTaGCTTTCAAATCCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: CPHFEVTWDTELAPSVWAFLWIL*LSNPRS
Trigger: ACTTCTGGGATTTGAAAGCCAGAGTATCCAGAGGAA...GGCCCATACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
3UTR CAA 72 bp GAACATCTGCACATTCTTCAGAATTTAACCGAACCTTaGCAAGCCATGCCGCCCGATTCCACTCGCCATACG +
Preference number: 4 (lower is better)
Translates to: EHLHILQNLTEP*QAMPPDSTRHT
Trigger: CGTATGGCGAGTGGAATCGGGCGGCATGGCTTGCAAAGGTTCGGTTAAATTCTGAAGAATGTGCAGATGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000136560.3
ENSMUST00000148752.8
CDS-3UTR TCA 90 bp TCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAGGTGCTGTCGCCCATTCCAAGGCTaGTGCAGTAGGAAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SAMSKAKNPPRPQEKRCCRPFQG*CSRKAF
Trigger: GAAAGCCTTCCTACTGCATCAGCCTTGGAATGGGCG...ACAGCACCTCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp CTTGCCATTGGCGATCATATTGGTTGCTACCAGCTTAATTGTGCTCTGAGAAGGCTGGGCTACTCCGGCTaGTACATCCCAGACAATGAT +
Preference number: 4 (lower is better)
Translates to: LAIGDHIGCYQLNCALRRLGYSG*YIPDND
Trigger: ATCATTGTCTGGGATGTAGCAGCCGGAGTAGCCCAG...CCTTCTCAGAGCACAATTAAGCTGGTAGCAACCAATATGATCGCCAATGGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR GCA 90 bp ACTGGTGAGGTGGTACACCAGGACAGAACCGTTACTCGTACCAACAGCAAGGAGAGAAAGGATGTTATCTaGGTAGCTCTTCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: TGEVVHQDRTVTRTNSKERKDVI*VALLPQ
Trigger: CTGTGGAAGAAGAGCTACGCAGATAACATCCTTTCT...CTCCTTGCTGTTGGTACGAGTAACGGTTCTGTCCTGGTGTACCACCTCACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR CCA 90 bp TGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAGGTGCTGTGGTTGGTCAAGCGCAGGCAGTATaGAGAGCCGATGTTATGGTG +
Preference number: 4 (lower is better)
Translates to: CLKQRIHHVLKKRGAVVGQAQAV*RADVMV
Trigger: CACCATAACATCGGCTCTCCATACTGCCTGCGCTTG...ACCAACCACAGCACCTCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp CTCTTTCTAGCTGAAATTTCTGGAAGTAGGTGTTCTCACAGAGCACATCGTAGCGTGGGCACATTCGGATaGCAAACTGAGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LFLAEISGSRCSHRAHRSVGTFG*QTEGKG
Trigger: TCCCTTCCCCTCAGTTTGCCATCCGAATGTGCCCAC...GCTACGATGTGCTCTGTGAGAACACCTACTTCCAGAAATTTCAGCTAGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR CAA 72 bp GAAAGGAAACTGGTCAAGCTTGTCCATTCAATACCCTaGACTTCACACGAGTGGACACTGAGCTCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: ERKLVKLVHSIP*TSHEWTLSSLC
Trigger: GCACAAGGAGCTCAGTGTCCACTCGTGTGAAGTCAAGGGTATTGAATGGACAAGCTTGACCAGTTTCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR TCA 90 bp GGGCAAAGCGAATCTTCCTCACCCAACTTCTATGTGTGGGTATTCCTCTGGATAACTGGAGGCAGTCATTaGGAGCTACAAAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: GQSESSSPNFYVWVFLWITGGSH*ELQNQH
Trigger: GTGCTGATTTTGTAGCTCTCAATGACTGCCTCCAGT...TATCCAGAGGAATACCCACACATAGAAGTTGGGTGAGGAAGATTCGCTTTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR TCA 90 bp TTAGACGTGCTCCATGAAGACTATGAGCCCCAAATACAAAGTTCAGCAATGTCTATTCGGATGGCAAACTaGGGGGAAGGGAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: LDVLHEDYEPQIQSSAMSIRMAN*GEGSPE
Trigger: CTCAGGACTCCCTTCCCCTCAGTTTGCCATCCGAAT...AGACATTGCTGAACTTTGTATTTGGGGCTCATAGTCTTCATGGAGCACGTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp TCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAGGTGCTGTCTGGGCTACTCCGGCTaGTACATCCCAGACAATGAT +
Preference number: 4 (lower is better)
Translates to: SAMSKAKNPPRPQEKRCCLGYSG*YIPDND
Trigger: ATCATTGTCTGGGATGTAGCAGCCGGAGTAGCCCAG...ACAGCACCTCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp ATTCTTCAGAATTTAACCGAACCTTTGCAAGCCATGCCGCCCGATTCCACTCGCGCCTGTTCTCTCGATTaGAATCACACCAACTGTTTG +
Preference number: 4 (lower is better)
Translates to: ILQNLTEPLQAMPPDSTRACSLD*NHTNCL
Trigger: CAAACAGTTGGTGTGATTGCAATCGAGAGAACAGGC...GCGAGTGGAATCGGGCGGCATGGCTTGCAAAGGTTCGGTTAAATTCTGAAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR GCA 90 bp TGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAGGTGCTGTGGTTGGTAGCAGGAACTTGAGGTaGACTTCCTGCAGAATGGAG +
Preference number: 4 (lower is better)
Translates to: CLKQRIHHVLKKRGAVVGSRNLR*TSCRME
Trigger: CTCCATTCTGCAGGAAGTGCACCTCAAGTTCCTGCT...ACCAACCACAGCACCTCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp ACGTGCTCCATGAAGACTATGAGCCCCAAATACAAAGTTCAGCAATGTCTAAAGACGAGCAGGCACCTCTaGAAGAGAGAGAAGTCGGGA +
Preference number: 4 (lower is better)
Translates to: TCSMKTMSPKYKVQQCLKTSRHL*KREKSG
Trigger: TCCCGACTTCTCTCTCTTGCAGAGGTGCCTGCTCGT...CTTTAGACATTGCTGAACTTTGTATTTGGGGCTCATAGTCTTCATGGAGCACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp TCAGAACATCTGCACATTCTTCAGAATTTAACCGAACCTTTGCAAGCCATGCCGTTCTTCCCCAGCAATTaGACTCTGCCCTGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: SEHLHILQNLTEPLQAMPFFPSN*TLPCSV
Trigger: CACGGAACAGGGCAGAGTGCAATTGCTGGGGAAGAA...CGGCATGGCTTGCAAAGGTTCGGTTAAATTCTGAAGAATGTGCAGATGTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR CCA 90 bp ACGTGCTCCATGAAGACTATGAGCCCCAAATACAAAGTTCAGCAATGTCTAAAGCAGCTTGTTATGAGCTaGGCTGGAGTGTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: TCSMKTMSPKYKVQQCLKQLVMS*AGVWAG
Trigger: TCCAGCCCACACTCCAGCCCAGCTCATAACAAGCTG...CTTTAGACATTGCTGAACTTTGTATTTGGGGCTCATAGTCTTCATGGAGCACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp CTGAGTTCAGCCTTACTCTCTGCCTCCTGTAATAAACTGATCACAGATGATTCACAGCTTGTTATGAGCTaGGCTGGAGTGTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LSSALLSASCNKLITDDSQLVMS*AGVWAG
Trigger: TCCAGCCCACACTCCAGCCCAGCTCATAACAAGCTG...TGAATCATCTGTGATCAGTTTATTACAGGAGGCAGAGAGTAAGGCTGAACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR CCA 90 bp ACGTGCTCCATGAAGACTATGAGCCCCAAATACAAAGTTCAGCAATGTCTAAAGGCCCATGCTACCATCTaGTGGAATCCGAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: TCSMKTMSPKYKVQQCLKAHATI*WNPSTV
Trigger: GACAGTGCTCGGATTCCACCAGATGGTAGCATGGGC...CTTTAGACATTGCTGAACTTTGTATTTGGGGCTCATAGTCTTCATGGAGCACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp TGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAGGTGCTGTGGTTGGTGTAGCAGATGTCCAATaGGTTGCTCAGCCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: CLKQRIHHVLKKRGAVVGVADVQ*VAQPVL
Trigger: AAGGACAGGCTGAGCAACCCATTGGACATCTGCTAC...ACCAACCACAGCACCTCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp TACAAAGTTCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAGGTGAGGGTGCGCGCTaGCACCTTGAAGTTTACGGT +
Preference number: 4 (lower is better)
Translates to: YKVQQCLKQRIHHVLKKRGEGAR*HLEVYG
Trigger: ACCGTAAACTTCAAGGTGTCAGCGCGCACCCTCACC...TCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGAACTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp ACTGGTGAGGTGGTACACCAGGACAGAACCGTTACTCGTACCAACAGCAAGGAGATCTGGTTCATCATTTaGTGTAGTACAGATGCTGTT +
Preference number: 4 (lower is better)
Translates to: TGEVVHQDRTVTRTNSKEIWFII*CSTDAV
Trigger: AACAGCATCTGTACTACATCAAATGATGAACCAGAT...CTCCTTGCTGTTGGTACGAGTAACGGTTCTGTCCTGGTGTACCACCTCACCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR TCA 90 bp TGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAGGTGCTGTGGTTGGTCAAGATCACCTTATCTaGTGTGCACCAGTCCACATC +
Preference number: 4 (lower is better)
Translates to: CLKQRIHHVLKKRGAVVGQDHLI*CAPVHI
Trigger: GATGTGGACTGGTGCACATCAGATAAGGTGATCTTG...ACCAACCACAGCACCTCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp CTCTTTCTAGCTGAAATTTCTGGAAGTAGGTGTTCTCACAGAGCACATCGTAGCTCTTCTTCCACAGCTTaGTGCCTGTGTCTGCATTCC +
Preference number: 4 (lower is better)
Translates to: LFLAEISGSRCSHRAHRSSSSTA*CLCLHS
Trigger: GGAATGCAGACACAGGCACCAAGCTGTGGAAGAAGA...GCTACGATGTGCTCTGTGAGAACACCTACTTCCAGAAATTTCAGCTAGAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR CCA 90 bp TTGGCCATCATTGTCAGTAAACACAAAATGCTCCCGAGCAGAGATGTTCTGACTGCACTTCCTGCAGAATaGAGCCTTTGGGGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LAIIVSKHKMLPSRDVLTALPAE*SLWGVL
Trigger: AAGAACACCCCAAAGGCTCCATTCTGCAGGAAGTGC...AGTCAGAACATCTCTGCTCGGGAGCATTTTGTGTTTACTGACAATGATGGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
3UTR CAA 72 bp CCATCATTATACATTGCTATTAGCTTCTGGTTTCCCTaGCCGGGGGCAAAGCGAATCTTCCTCACCCAACTT +
Preference number: 4 (lower is better)
Translates to: PSLYIAISFWFP*PGAKRIFLTQL
Trigger: AAGTTGGGTGAGGAAGATTCGCTTTGCCCCCGGCAAGGGAAACCAGAAGCTAATAGCAATGTATAATGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR TCA 90 bp ATTCTTCAGAATTTAACCGAACCTTTGCAAGCCATGCCGCCCGATTCCACTCGCGCACTCGGTTTCTCCTaGGTGATTAAAATCTTTACT +
Preference number: 4 (lower is better)
Translates to: ILQNLTEPLQAMPPDSTRALGFS*VIKIFT
Trigger: AGTAAAGATTTTAATCACTCAGGAGAAACCGAGTGC...GCGAGTGGAATCGGGCGGCATGGCTTGCAAAGGTTCGGTTAAATTCTGAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR TCA 90 bp ACGTGCTCCATGAAGACTATGAGCCCCAAATACAAAGTTCAGCAATGTCTAAAGCGAGCAGAGATGTTCTaGCTGAGTTCAGCCTTACTC +
Preference number: 4 (lower is better)
Translates to: TCSMKTMSPKYKVQQCLKRAEMF*LSSALL
Trigger: GAGTAAGGCTGAACTCAGTCAGAACATCTCTGCTCG...CTTTAGACATTGCTGAACTTTGTATTTGGGGCTCATAGTCTTCATGGAGCACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp TACAAAGTTCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAGCTGTGAAGCGTCTCTaGCACGCTGACAAAGCAACC +
Preference number: 4 (lower is better)
Translates to: YKVQQCLKQRIHHVLKKRAVKRL*HADKAT
Trigger: GGTTGCTTTGTCAGCGTGGCAGAGACGCTTCACAGC...TCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGAACTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp ACGTGCTCCATGAAGACTATGAGCCCCAAATACAAAGTTCAGCAATGTCTAAAGTCTTCTTCCACAGCTTaGTGCCTGTGTCTGCATTCC +
Preference number: 4 (lower is better)
Translates to: TCSMKTMSPKYKVQQCLKSSSTA*CLCLHS
Trigger: GGAATGCAGACACAGGCACCAAGCTGTGGAAGAAGA...CTTTAGACATTGCTGAACTTTGTATTTGGGGCTCATAGTCTTCATGGAGCACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp ATACAAAGTTCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGCCTAGCAGCAGGAGCTaGTCTGTGCACTTTCTCGTG +
Preference number: 4 (lower is better)
Translates to: IQSSAMSKAKNPPRPQEKPSSRS*SVHFLV
Trigger: CACGAGAAAGTGCACAGACCAGCTCCTGCTGCTAGG...CTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGAACTTTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp ACGTGCTCCATGAAGACTATGAGCCCCAAATACAAAGTTCAGCAATGTCTAAAGACTGGAGGCAGTCATTaGGAGCTACAAAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: TCSMKTMSPKYKVQQCLKTGGSH*ELQNQH
Trigger: GTGCTGATTTTGTAGCTCTCAATGACTGCCTCCAGT...CTTTAGACATTGCTGAACTTTGTATTTGGGGCTCATAGTCTTCATGGAGCACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp TACAAAGTTCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAGACAGCACACCATACTaGAGGGACGGACAGTTTTCG +
Preference number: 4 (lower is better)
Translates to: YKVQQCLKQRIHHVLKKRDSTPY*RDGQFS
Trigger: CGAAAACTGTCCGTCCCTTCAGTATGGTGTGCTGTC...TCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGAACTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp TGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAGGTGCTGTGGTTGGTCCAGGGGCTTATCTTTaGAAACAACTGCCAAATACT +
Preference number: 4 (lower is better)
Translates to: CLKQRIHHVLKKRGAVVGPGAYL*KQLPNT
Trigger: AGTATTTGGCAGTTGTTTTCAAAGATAAGCCCCTGG...ACCAACCACAGCACCTCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp ACAAAGGTGGGAAATGTACAAAGAGGCTTCAGAAATGAGGTTTCTGGAACATATTGGATGGGCTTCACGTaGTCTTGGATCTCACACTGG +
Preference number: 4 (lower is better)
Translates to: TKVGNVQRGFRNEVSGTYWMGFT*SWISHW
Trigger: CCAGTGTGAGATCCAAGAGCACGTGAAGCCCATCCA...ATATGTTCCAGAAACCTCATTTCTGAAGCCTCTTTGTACATTTCCCACCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp CACACTTCAGCACCATCATTATACATTGCTATTAGCTTCTGGTTTCCCTTGCCGTTTCGTCACCCTGATTaGATCACACTGGCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: HTSAPSLYIAISFWFPLPFRHPD*ITLASQ
Trigger: TTGAGAAGCCAGTGTGATGCAATCAGGGTGACGAAA...CGGCAAGGGAAACCAGAAGCTAATAGCAATGTATAATGATGGTGCTGAAGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR GCA 90 bp CTATGTGTGGGTATTCCTCTGGATACTCTGGCTTTCAAATCCCAGAAGTTTAAAAGCAGGAACTTGAGGTaGACTTCCTGCAGAATGGAG +
Preference number: 4 (lower is better)
Translates to: LCVGIPLDTLAFKSQKFKSRNLR*TSCRME
Trigger: CTCCATTCTGCAGGAAGTGCACCTCAAGTTCCTGCT...TTTAAACTTCTGGGATTTGAAAGCCAGAGTATCCAGAGGAATACCCACACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR CCA 90 bp CTGAGTTCAGCCTTACTCTCTGCCTCCTGTAATAAACTGATCACAGATGATTCAATCTCGCTGAGAGCATaGTATTACCTGCAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LSSALLSASCNKLITDDSISLRA*YYLQKG
Trigger: CCCTTTCTGCAGGTAATACCATGCTCTCAGCGAGAT...TGAATCATCTGTGATCAGTTTATTACAGGAGGCAGAGAGTAAGGCTGAACTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR CCA 90 bp TGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAGGTGCTGTGGTTGGTACCAACAGCAAGGAGTaGCTGGTACATCTTAATGTT +
Preference number: 4 (lower is better)
Translates to: CLKQRIHHVLKKRGAVVGTNSKE*LVHLNV
Trigger: AACATTAAGATGTACCAGCCACTCCTTGCTGTTGGT...ACCAACCACAGCACCTCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp ACGTGCTCCATGAAGACTATGAGCCCCAAATACAAAGTTCAGCAATGTCTAAAGATCACACCAACTGTTTaGTTCACTTCCAGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: TCSMKTMSPKYKVQQCLKITPTV*FTSRSR
Trigger: CCTTGACCTGGAAGTGAATCAAACAGTTGGTGTGAT...CTTTAGACATTGCTGAACTTTGTATTTGGGGCTCATAGTCTTCATGGAGCACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp TCAACCCACCGCTTCAGAACATCTGCACATTCTTCAGAATTTAACCGAACCTTTATCACACCAACTGTTTaGTTCACTTCCAGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: STHRFRTSAHSSEFNRTFITPTV*FTSRSR
Trigger: CCTTGACCTGGAAGTGAATCAAACAGTTGGTGTGAT...AAAGGTTCGGTTAAATTCTGAAGAATGTGCAGATGTTCTGAAGCGGTGGGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR TCA 90 bp ACAAAGGTGGGAAATGTACAAAGAGGCTTCAGAAATGAGGTTTCTGGAACATATAGGCTCTTCAGGTTGTaGGATGGTGACCACTCCAAT +
Preference number: 4 (lower is better)
Translates to: TKVGNVQRGFRNEVSGTYRLFRL*DGDHSN
Trigger: ATTGGAGTGGTCACCATCTCACAACCTGAAGAGCCT...ATATGTTCCAGAAACCTCATTTCTGAAGCCTCTTTGTACATTTCCCACCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp TTAGACGTGCTCCATGAAGACTATGAGCCCCAAATACAAAGTTCAGCAATGTCTAAACTGCTCACCATCTaGACCTCTTTAGTATCCCAC +
Preference number: 4 (lower is better)
Translates to: LDVLHEDYEPQIQSSAMSKLLTI*TSLVSH
Trigger: GTGGGATACTAAAGAGGTTCAGATGGTGAGCAGTTT...AGACATTGCTGAACTTTGTATTTGGGGCTCATAGTCTTCATGGAGCACGTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp TCTCTAAGAAGAGTGCAAGTTCTAATATCCCATAATTCCAGGGGCTTATCTTTGTCTTCCACAGCTTGGTaGCTGTGTCTGCATTCCACA +
Preference number: 4 (lower is better)
Translates to: SLRRVQVLISHNSRGLSLSSTAW*LCLHST
Trigger: TGTGGAATGCAGACACAGGCACCAAGCTGTGGAAGA...CAAAGATAAGCCCCTGGAATTATGGGATATTAGAACTTGCACTCTTCTTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR GCA 90 bp ACGTGCTCCATGAAGACTATGAGCCCCAAATACAAAGTTCAGCAATGTCTAAAGGGACACGTAAGGTTATaGAGCCATTTTCATGTAGGC +
Preference number: 4 (lower is better)
Translates to: TCSMKTMSPKYKVQQCLKGHVRL*SHFHVG
Trigger: GCCTACATGAAAATGGCTGCATAACCTTACGTGTCC...CTTTAGACATTGCTGAACTTTGTATTTGGGGCTCATAGTCTTCATGGAGCACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp ATACAAAGTTCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGCGATGCCCTCGCTGGTaGGTAAAGTTAAATGTGAAG +
Preference number: 4 (lower is better)
Translates to: IQSSAMSKAKNPPRPQEKRCPRW*VKLNVK
Trigger: CTTCACATTTAACTTTACTCACCAGCGAGGGCATCG...CTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGAACTTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp TGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAGGTGCTGTGGTTGGTTCAGATGAGACACTTTaGTCATTTCAATGGGTGATT +
Preference number: 4 (lower is better)
Translates to: CLKQRIHHVLKKRGAVVGSDETL*SFQWVI
Trigger: AATCACCCATTGAAATGATCAAAGTGTCTCATCTGA...ACCAACCACAGCACCTCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp ATACAAAGTTCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGTCTCTGTGTCCTCACTaGCTTCAAATGCACCGTACT +
Preference number: 4 (lower is better)
Translates to: IQSSAMSKAKNPPRPQEKSLCPH*LQMHRT
Trigger: AGTACGGTGCATTTGAAGTCAGTGAGGACACAGAGA...CTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGAACTTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp ACGTGCTCCATGAAGACTATGAGCCCCAAATACAAAGTTCAGCAATGTCTAAAGTCAGTAAACACAAAATaGTCCCGAGCAGAGATGTTC +
Preference number: 4 (lower is better)
Translates to: TCSMKTMSPKYKVQQCLKSVNTK*SRAEMF
Trigger: GAACATCTCTGCTCGGGAGCATTTTGTGTTTACTGA...CTTTAGACATTGCTGAACTTTGTATTTGGGGCTCATAGTCTTCATGGAGCACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp TTAGACGTGCTCCATGAAGACTATGAGCCCCAAATACAAAGTTCAGCAATGTCTTCACCTTATCTGATGTaGACCAGTCCACATCCAAAA +
Preference number: 4 (lower is better)
Translates to: LDVLHEDYEPQIQSSAMSSPYLM*TSPHPK
Trigger: TTTTGGATGTGGACTGGTGCACATCAGATAAGGTGA...AGACATTGCTGAACTTTGTATTTGGGGCTCATAGTCTTCATGGAGCACGTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp TGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAGGTGCTGTGGTTGGTCAAAAGAAAGGAAACTaGTCAAGCTTGTCCATTCAA +
Preference number: 4 (lower is better)
Translates to: CLKQRIHHVLKKRGAVVGQKKGN*SSLSIQ
Trigger: TTGAATGGACAAGCTTGACCAGTTTCCTTTCTTTTG...ACCAACCACAGCACCTCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp ACGTGCTCCATGAAGACTATGAGCCCCAAATACAAAGTTCAGCAATGTCTAAAGCCTCCTGTAATAAACTaGTCACAGATGATTCAACAG +
Preference number: 4 (lower is better)
Translates to: TCSMKTMSPKYKVQQCLKPPVIN*SQMIQQ
Trigger: CTGTTGAATCATCTGTGATCAGTTTATTACAGGAGG...CTTTAGACATTGCTGAACTTTGTATTTGGGGCTCATAGTCTTCATGGAGCACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp ATACAAAGTTCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGTTTCGTCACCCTGATTaGATCACACTGGCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: IQSSAMSKAKNPPRPQEKFRHPD*ITLASQ
Trigger: TTGAGAAGCCAGTGTGATGCAATCAGGGTGACGAAA...CTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGAACTTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp TACAAAGTTCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGATTAGCTCTTCCTTGGTaGACCCAAGCTCATTCAACA +
Preference number: 4 (lower is better)
Translates to: YKVQQCLKQRIHHVLKKRLALPW*TQAHST
Trigger: TGTTGAATGAGCTTGGGTCCACCAAGGAAGAGCTAA...TCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGAACTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp TACAAAGTTCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAAGAAAGGATGTTATCTaGGTAGCTCTTCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: YKVQQCLKQRIHHVLKKRRKDVI*VALLPQ
Trigger: CTGTGGAAGAAGAGCTACGCAGATAACATCCTTTCT...TCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGAACTTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CCA 90 bp ACAAAGGTGGGAAATGTACAAAGAGGCTTCAGAAATGAGGTTTCTGGAACATATGTGTGGGTATTCCTCTaGATACTCTGGCTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: TKVGNVQRGFRNEVSGTYVWVFL*ILWLSN
Trigger: ATTTGAAAGCCAGAGTATCCAGAGGAATACCCACAC...ATATGTTCCAGAAACCTCATTTCTGAAGCCTCTTTGTACATTTCCCACCTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp ATACAAAGTTCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGGCACTCGGTTTCTCCTaGGTGATTAAAATCTTTACT +
Preference number: 4 (lower is better)
Translates to: IQSSAMSKAKNPPRPQEKALGFS*VIKIFT
Trigger: AGTAAAGATTTTAATCACTCAGGAGAAACCGAGTGC...CTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGAACTTTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp ACAATGCATGCAACTGTTCTTGAAGGAGAGTCTTTATTTCTTCATTTTCTGGATGGACACGTAAGGTTATaGAGCCATTTTCATGTAGGC +
Preference number: 4 (lower is better)
Translates to: TMHATVLEGESLFLHFLDGHVRL*SHFHVG
Trigger: GCCTACATGAAAATGGCTGCATAACCTTACGTGTCC...ATCCAGAAAATGAAGAAATAAAGACTCTCCTTCAAGAACAGTTGCATGCATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR CCA 90 bp ATACAAAGTTCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAGAACTTGTAGAGTTTaGGCAGTATTGGAATCGATC +
Preference number: 4 (lower is better)
Translates to: IQSSAMSKAKNPPRPQEKRTCRV*AVLESI
Trigger: GATCGATTCCAATACTGCCCAAACTCTACAAGTTCT...CTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGAACTTTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR TCA 90 bp TACAAAGTTCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAATCTGGTTCATCATTTaGTGTAGTACAGATGCTGTT +
Preference number: 4 (lower is better)
Translates to: YKVQQCLKQRIHHVLKKRIWFII*CSTDAV
Trigger: AACAGCATCTGTACTACATCAAATGATGAACCAGAT...TCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGAACTTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR GCA 90 bp ACAAAGGTGGGAAATGTACAAAGAGGCTTCAGAAATGAGGTTTCTGGAACATATTATGTCGTTAGACAATaGATGCAACTGTTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: TKVGNVQRGFRNEVSGTYYVVRQ*MQLFLK
Trigger: CTTCAAGAACAGTTGCATGCATTGTCTAACGACATA...ATATGTTCCAGAAACCTCATTTCTGAAGCCTCTTTGTACATTTCCCACCTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp CAAGCCCTCACGCAGGTCTGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGGCCTTGTTGTGCGCGTaGAGAGCCCCGGTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: QALTQVWTDHSCDQEHSQALLCA*RAPVRV
Trigger: CACCCTCACCGGGGCTCTCAACGCGCACAACAAGGC...CTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCAGACCTGCGTGAGGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp CAGGTCTGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGGTCAGCTCTCCTTCCACCGCCGCCTTGTaGTGCGCGTTGAGAGCCCCG +
Preference number: 5 (lower is better)
Translates to: QVWTDHSCDQEHSQVSSPSTAAL*CALRAP
Trigger: CGGGGCTCTCAACGCGCACAACAAGGCGGCGGTGGA...AGGAGAGCTGACCTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCAGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp TGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGGTCAGCTCTCCTCACCCCCAGTCCACCGCCGCCTaGTTGTGCGCGTTGAGAGCC +
Preference number: 5 (lower is better)
Translates to: WTDHSCDQEHSQVSSPHPQSTAA*LCALRA
Trigger: GGCTCTCAACGCGCACAACAAGGCGGCGGTGGACTG...GGGGTGAGGAGAGCTGACCTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp CCCCAGACTTGGCCTGGGACAAGCTGTGCAGGTAGTGGGCCGCCACTGTCCAGACCCGTCAGCAGGAACTaGAGGTGCACTTCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: PQTWPGTSCAGSGPPLSRPVSRN*RCTSCR
Trigger: TCTGCAGGAAGTGCACCTCAAGTTCCTGCTGACGGG...TCTGGACAGTGGCGGCCCACTACCTGCACAGCTTGTCCCAGGCCAAGTCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS GCA 90 bp TATGCAATTAAACCTTGCCAGCCCCAGTCCACCGCCGCCTTGTTGTaGGCGTTGAGAGCCCCGGTGAGGGTGCGCGCTGACACCTTGAAG +
Preference number: 5 (lower is better)
Translates to: YAIKPCQPQSTAALL*ALRAPVRVRADTLK
Trigger: CTTCAAGGTGTCAGCGCGCACCCTCACCGGGGCTCTCAACGCGCACAACAAGGCGGCGGTGGACTGGGGCTGGCAAGGTTTAATTGCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp CCACTCGCCATACGTCTGCAGGTAGCGACAGGCGTCCGCAGCCTTGTCTATCAAGGGCCGGAGGGAGGCTaGGATGGAGAGAAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: PLAIRLQVATGVRSLVYQGPEGG*DGEKSE
Trigger: CTCAGACTTCTCTCCATCCAAGCCTCCCTCCGGCCC...TTGATAGACAAGGCTGCGGACGCCTGTCGCTACCTGCAGACGTATGGCGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR CAA 90 bp CAAGCCCTCACGCAGGTCTGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGTGGACACTGAGCTCCTaGTGCAGCAGGCCACTGGTG +
Preference number: 5 (lower is better)
Translates to: QALTQVWTDHSCDQEHSQWTLSS*CSRPLV
Trigger: CACCAGTGGCCTGCTGCACAAGGAGCTCAGTGTCCA...CTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCAGACCTGCGTGAGGGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp CAGGAGCACAGCCAGGTCAGCTCTCCTCACCCCTCGCTTCCGACATCAGATTCCACTGTGTCCCCAGACTaGGCCTGGGACAAGCTGTGC +
Preference number: 5 (lower is better)
Translates to: QEHSQVSSPHPSLPTSDSTVSPD*AWDKLC
Trigger: GCACAGCTTGTCCCAGGCCAAGTCTGGGGACACAGT...GGAATCTGATGTCGGAAGCGAGGGGTGAGGAGAGCTGACCTGGCTGTGCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS CCA 90 bp AAGAGCCTTCTTGGCTCCCGTGGCTGCGGCCAGCTTGTTATGAGCTaGGCTGGAGTGTGGGCTGGAGATGTACACTTTCTTCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: KSLLGSRGCGQLVMS*AGVWAGDVHFLPRA
Trigger: GGCCCTGGGAAGAAAGTGTACATCTCCAGCCCACACTCCAGCCCAGCTCATAACAAGCTGGCCGCAGCCACGGGAGCCAAGAAGGCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS-3UTR CAA 90 bp CAAGCCCTCACGCAGGTCTGGACTGACCATAGCTGTGACCAGGAGCACAGCCAGGGGCTTCACGTGCTCTaGGATCTCACACTGGGCTAC +
Preference number: 5 (lower is better)
Translates to: QALTQVWTDHSCDQEHSQGLHVL*DLTLGY
Trigger: GTAGCCCAGTGTGAGATCCAAGAGCACGTGAAGCCC...CTGGCTGTGCTCCTGGTCACAGCTATGGTCAGTCCAGACCTGCGTGAGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS TCA 90 bp CAGTGGTGGGCACATTCGGATGGCAAACTGAGGGGAAGGGAGTCCTaGGAGCAGTCCCGTCAGCAGGAACTTGAGGTGCACTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: QWWAHSDGKLRGRES*EQSRQQELEVHFLQ
Trigger: CTGCAGGAAGTGCACCTCAAGTTCCTGCTGACGGGACTGCTCTCAGGACTCCCTTCCCCTCAGTTTGCCATCCGAATGTGCCCACCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS TCA 90 bp CAGTGGTGGGCACATTCGGATGGCAAACTGAGGGGAAGGGAGTCCTaGGAGCAGTCCCGTCAGCAGGAACTTGAGGTGCACTTCCTGCNN +
Preference number: 5 (lower is better)
Translates to: QWWAHSDGKLRGRES*EQSRQQELEVHFLX
Trigger: NNGCAGGAAGTGCACCTCAAGTTCCTGCTGACGGGACTGCTCTCAGGACTCCCTTCCCCTCAGTTTGCCATCCGAATGTGCCCACCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206442.2
CDS-3UTR CAA 90 bp CAGGAGCACAGCCAGGTCAGCTCTCCTCACCCCTCGCTTCCGACATCAGATTCCTTAGGAGCACCTTCCTaGGTTACCACTGTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: QEHSQVSSPHPSLPTSDSLGAPS*VTTVSP
Trigger: TGGGGACACAGTGGTAACCAAGGAAGGTGCTCCTAA...GGAATCTGATGTCGGAAGCGAGGGGTGAGGAGAGCTGACCTGGCTGTGCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp CAGGAGCACAGCCAGGTCAGCTCTCCTCACCCCTCGCTTCCGACATCAGATTCCACACCCTCTGCCAGCTaGCCATTGGCGATCATATTG +
Preference number: 5 (lower is better)
Translates to: QEHSQVSSPHPSLPTSDSTPSAS*PLAIIL
Trigger: CAATATGATCGCCAATGGCAAGCTGGCAGAGGGTGT...GGAATCTGATGTCGGAAGCGAGGGGTGAGGAGAGCTGACCTGGCTGTGCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp CAGGAGCACAGCCAGGTCAGCTCTCCTCACCCCTCGCTTCCGACATCAGATTCCTCCGTTAGCTCTTCCTaGGTGGACCCAAGCTCATTC +
Preference number: 5 (lower is better)
Translates to: QEHSQVSSPHPSLPTSDSSVSSS*VDPSSF
Trigger: GAATGAGCTTGGGTCCACCAAGGAAGAGCTAACGGA...GGAATCTGATGTCGGAAGCGAGGGGTGAGGAGAGCTGACCTGGCTGTGCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS TCA 90 bp CAGCTCTATCGAAGTATCTCATGCTGTGAAGCGTCTCTGCCACGCTaGCAAAGCAACCCAGAGAGAGGAGGACCAGGAGGGCCTTGGACT +
Preference number: 5 (lower is better)
Translates to: QLYRSISCCEASLPR*QSNPERGGPGGPWT
Trigger: AGTCCAAGGCCCTCCTGGTCCTCCTCTCTCTGGGTTGCTTTGTCAGCGTGGCAGAGACGCTTCACAGCATGAGATACTTCGATAGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS GCA 90 bp GATGGGCTTCACGTGCTCTTGGATCTCACACTGGGCTACTCCGGCTaGTACATCCCAGACAATGATCTTCCCAGTGACATCCGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: DGLHVLLDLTLGYSG*YIPDNDLPSDIRRS
Trigger: GCTTCTGCGGATGTCACTGGGAAGATCATTGTCTGGGATGTAGCAGCCGGAGTAGCCCAGTGTGAGATCCAAGAGCACGTGAAGCCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS GCA 90 bp AGTCCTGAGAGCAGTCCCGTCAGCAGGAACTTGAGGTGCACTTCCTaGAGAATGGAGCCTTTGGGGTGTTCTTCCCCAGCAATTGCACTC +
Preference number: 5 (lower is better)
Translates to: SPESSPVSRNLRCTS*RMEPLGCSSPAIAL
Trigger: GAGTGCAATTGCTGGGGAAGAACACCCCAAAGGCTCCATTCTGCAGGAAGTGCACCTCAAGTTCCTGCTGACGGGACTGCTCTCAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS GCA 90 bp TGCTCCCTGTCTAAAGCCGAGGCTCTTCAGGCTCCGGGCATAGTCTaGGTAGATGGCAGCAATGAGCTTCTCTGTGTCCTCACTGACTTC +
Preference number: 5 (lower is better)
Translates to: CSLSKAEALQAPGIV*VDGSNELLCVLTDF
Trigger: GAAGTCAGTGAGGACACAGAGAAGCTCATTGCTGCCATCTACGCAGACTATGCCCGGAGCCTGAAGAGCCTCGGCTTTAGACAGGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp AGCAGGCCACTGGTGAGGTGGTACACCAGGACAGAACCGTTACTCGTACCAACATGCAGAATGGAGCCTTaGGGGTGTTCTTCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: SRPLVRWYTRTEPLLVPTCRMEP*GCSSPA
Trigger: TGCTGGGGAAGAACACCCCAAAGGCTCCATTCTGCA...TGTTGGTACGAGTAACGGTTCTGTCCTGGTGTACCACCTCACCAGTGGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS TCA 90 bp TTATTAAGAGCCTTCTTGGCTCCCGTGGCTGCGGCCAGCTTGTTATaGGCTGGGCTGGAGTGTGGGCTGGAGATGTACACTTTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: LLRAFLAPVAAASLL*AGLECGLEMYTFFP
Trigger: TGGGAAGAAAGTGTACATCTCCAGCCCACACTCCAGCCCAGCTCATAACAAGCTGGCCGCAGCCACGGGAGCCAAGAAGGCTCTTAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS CCA 90 bp AATGATCTTCCCAGTGACATCCGCAGAAGCCAAGCGCAGGCAGTATaGAGAGCCGATGTTATGGTGATAGTTCTCCCTGGCCCACCTGAC +
Preference number: 5 (lower is better)
Translates to: NDLPSDIRRSQAQAV*RADVMVIVLPGPPD
Trigger: GTCAGGTGGGCCAGGGAGAACTATCACCATAACATCGGCTCTCCATACTGCCTGCGCTTGGCTTCTGCGGATGTCACTGGGAAGATCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS CCA 90 bp CACTGCACATCTTGGATGGGCTTCACGTGCTCTTGGATCTCACACTaGGCTACTCCGGCTGCTACATCCCAGACAATGATCTTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: HCTSWMGFTCSWISH*ATPAATSQTMIFPV
Trigger: CACTGGGAAGATCATTGTCTGGGATGTAGCAGCCGGAGTAGCCCAGTGTGAGATCCAAGAGCACGTGAAGCCCATCCAAGATGTGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS-3UTR CAA 90 bp TCCACTCGCCATACGTCTGCAGGTAGCGACAGGCGTCCGCAGCCTTGTCTATCACGCCTGTTCTCTCGATaGCAATCACACCAACTGTTT +
Preference number: 5 (lower is better)
Translates to: STRHTSAGSDRRPQPCLSRLFSR*QSHQLF
Trigger: AAACAGTTGGTGTGATTGCAATCGAGAGAACAGGCG...TGATAGACAAGGCTGCGGACGCCTGTCGCTACCTGCAGACGTATGGCGAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS TCA 90 bp GGACCCAAGCTCATTCAACAAATCTCTGCCAGCCGCTCCAGCTTTTaGAGCAAAACGCACTGCTCCCTGTCTAAAGCCGAGGCTCTTCAG +
Preference number: 5 (lower is better)
Translates to: GPKLIQQISASRSSF*SKTHCSLSKAEALQ
Trigger: CTGAAGAGCCTCGGCTTTAGACAGGGAGCAGTGCGTTTTGCTTCAAAAGCTGGAGCGGCTGGCAGAGATTTGTTGAATGAGCTTGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS GCA 90 bp CCGTTAGCTCTTCCTTGGTGGACCCAAGCTCATTCAACAAATCTCTaGCAGCCGCTCCAGCTTTTGAAGCAAAACGCACTGCTCCCTGTC +
Preference number: 5 (lower is better)
Translates to: PLALPWWTQAHSTNL*QPLQLLKQNALLPV
Trigger: GACAGGGAGCAGTGCGTTTTGCTTCAAAAGCTGGAGCGGCTGGCAGAGATTTGTTGAATGAGCTTGGGTCCACCAAGGAAGAGCTAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp CCCATTTTGAGGTCACCTGGGACACAGAACTGGCTCCTAGTGTATGGGCCTATGCAGATGTCCAATGGGTaGCTCAGCCTGTCCTTAGGA +
Preference number: 5 (lower is better)
Translates to: PILRSPGTQNWLLVYGPMQMSNG*LSLSLG
Trigger: TCCTAAGGACAGGCTGAGCAACCCATTGGACATCTG...CATAGGCCCATACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS GCA 90 bp GATGTTATCTGCGTAGCTCTTCTTCCACAGCTTGGTGCCTGTGTCTaGATTCCACAGCACGATGTAATTAGGCGGGTGGATAGCGAGCAG +
Preference number: 5 (lower is better)
Translates to: DVICVALLPQLGACV*IPQHDVIRRVDSEQ
Trigger: CTGCTCGCTATCCACCCGCCTAATTACATCGTGCTGTGGAATGCAGACACAGGCACCAAGCTGTGGAAGAAGAGCTACGCAGATAACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS-3UTR CAA 90 bp TGTCCCCATTTTGAGGTCACCTGGGACACAGAACTGGCTCCTAGTGTATGGGCCAGAGTTTGGGCAGTATaGGAATCGATCACTACCACC +
Preference number: 5 (lower is better)
Translates to: CPHFEVTWDTELAPSVWARVWAV*ESITTT
Trigger: GGTGGTAGTGATCGATTCCAATACTGCCCAAACTCT...GGCCCATACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS CCA 90 bp TGTAGAGTTTGGGCAGTATTGGAATCGATCACTACCACCAGTGAATaGCATCCATATGCAATTAAACCTTGCCAGCCCCAGTCCACCGCC +
Preference number: 5 (lower is better)
Translates to: CRVWAVLESITTTSE*HPYAIKPCQPQSTA
Trigger: GGCGGTGGACTGGGGCTGGCAAGGTTTAATTGCATATGGATGCCATTCACTGGTGGTAGTGATCGATTCCAATACTGCCCAAACTCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp CCCATTTTGAGGTCACCTGGGACACAGAACTGGCTCCTAGTGTATGGGCCTATGAACTGGAGGCAGTCATaGAGAGCTACAAAATCAGCA +
Preference number: 5 (lower is better)
Translates to: PILRSPGTQNWLLVYGPMNWRQS*RATKSA
Trigger: TGCTGATTTTGTAGCTCTCAATGACTGCCTCCAGTT...CATAGGCCCATACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp TGTCCCCATTTTGAGGTCACCTGGGACACAGAACTGGCTCCTAGTGTATGGGCCGCATGTGATTCCTTTTaGAAGGCAGATAGGCTAACT +
Preference number: 5 (lower is better)
Translates to: CPHFEVTWDTELAPSVWAACDSF*KADRLT
Trigger: AGTTAGCCTATCTGCCTTCAAAAAGGAATCACATGC...GGCCCATACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp ACTATGTGTCCCCATTTTGAGGTCACCTGGGACACAGAACTGGCTCCTAGTGTAGTTCTTCCCCAGCAATaGCACTCTGCCCGATCATAT +
Preference number: 5 (lower is better)
Translates to: TMCPHFEVTWDTELAPSVVLPQQ*HSARSY
Trigger: ATATGATCGGGCAGAGTGCAATTGCTGGGGAAGAAC...TACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGGGACACATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp TCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAGGTGCTGTCCCGTCAGCAGGAACTaGAGGTGCACTTCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: SAMSKAKNPPRPQEKRCCPVSRN*RCTSCR
Trigger: TCTGCAGGAAGTGCACCTCAAGTTCCTGCTGACGGG...ACAGCACCTCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp ATACAAAGTTCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGGGGCCGGAGGGAGGCTaGGATGGAGAGAAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: IQSSAMSKAKNPPRPQEKGPEGG*DGEKSE
Trigger: CTCAGACTTCTCTCCATCCAAGCCTCCCTCCGGCCC...CTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGAACTTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp CTCTTTCTAGCTGAAATTTCTGGAAGTAGGTGTTCTCACAGAGCACATCGTAGCGTTCTTCCCCAGCAATaGCACTCTGCCCTGTTCCGT +
Preference number: 5 (lower is better)
Translates to: LFLAEISGSRCSHRAHRSVLPQQ*HSALFR
Trigger: ACGGAACAGGGCAGAGTGCAATTGCTGGGGAAGAAC...GCTACGATGTGCTCTGTGAGAACACCTACTTCCAGAAATTTCAGCTAGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS TCA 90 bp AAGGTTATGCAGCCATTTTCATGTAGGCAAAACAAGCCATCTCGCTaGGAGCATGGTATTACCTGCAGAAAGGGAACGCCTGTTCTCTCG +
Preference number: 5 (lower is better)
Translates to: KVMQPFSCRQNKPSR*EHGITCRKGTPVLS
Trigger: CGAGAGAACAGGCGTTCCCTTTCTGCAGGTAATACCATGCTCTCAGCGAGATGGCTTGTTTTGCCTACATGAAAATGGCTGCATAACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS-3UTR CAA 90 bp ACGTGCTCCATGAAGACTATGAGCCCCAAATACAAAGTTCAGCAATGTCTAAAGCAGTGCTCCTCCCTGTaGGGAGATCAACCAGCTGAA +
Preference number: 5 (lower is better)
Translates to: TCSMKTMSPKYKVQQCLKQCSSL*GDQPAE
Trigger: TTCAGCTGGTTGATCTCCCAACAGGGAGGAGCACTG...CTTTAGACATTGCTGAACTTTGTATTTGGGGCTCATAGTCTTCATGGAGCACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp TGTCCCCATTTTGAGGTCACCTGGGACACAGAACTGGCTCCTAGTGTATGGGCCAGTGAGATGATAAACTaGGCCATCATTGTCAGTAAA +
Preference number: 5 (lower is better)
Translates to: CPHFEVTWDTELAPSVWASEMIN*AIIVSK
Trigger: TTTACTGACAATGATGGCCAAGTTTATCATCTCACT...GGCCCATACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp TGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAGGTGCTGTGGTTGGTGCCTTGGACTTCTGGTaGACTTGTGGAGAACAAAGG +
Preference number: 5 (lower is better)
Translates to: CLKQRIHHVLKKRGAVVGALDFW*TCGEQR
Trigger: CCTTTGTTCTCCACAAGTCAACCAGAAGTCCAAGGC...ACCAACCACAGCACCTCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp CAGCTTGCCATTGGCGATCATATTGGTTGCTACCAGCTTAATTGTGCTCTGAGAAACTGGAGGCAGTCATaGAGAGCTACAAAATCAGCA +
Preference number: 5 (lower is better)
Translates to: QLAIGDHIGCYQLNCALRNWRQS*RATKSA
Trigger: TGCTGATTTTGTAGCTCTCAATGACTGCCTCCAGTT...TCTCAGAGCACAATTAAGCTGGTAGCAACCAATATGATCGCCAATGGCAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR CAA 90 bp TACAAAGTTCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGATGCAGAATGGAGCCTTaGGGGTGTTCTTCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: YKVQQCLKQRIHHVLKKRCRMEP*GCSSPA
Trigger: TGCTGGGGAAGAACACCCCAAAGGCTCCATTCTGCA...TCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGAACTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp TCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGAGGTGCTGTTCAAATGCACCGTACTaGAGACAGGCTTCCACAAAC +
Preference number: 5 (lower is better)
Translates to: SAMSKAKNPPRPQEKRCCSNAPY*RQASTN
Trigger: GTTTGTGGAAGCCTGTCTCAAGTACGGTGCATTTGA...ACAGCACCTCTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp TTAGACGTGCTCCATGAAGACTATGAGCCCCAAATACAAAGTTCAGCAATGTCTGTCCATTCAATACCCTaGACTTCACACGAGTGGACA +
Preference number: 5 (lower is better)
Translates to: LDVLHEDYEPQIQSSAMSVHSIP*TSHEWT
Trigger: TGTCCACTCGTGTGAAGTCAAGGGTATTGAATGGAC...AGACATTGCTGAACTTTGTATTTGGGGCTCATAGTCTTCATGGAGCACGTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp ATACAAAGTTCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGGCTGGTTATCTGCACTaGTTTCCAACAGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: IQSSAMSKAKNPPRPQEKAGYLH*FPTAAA
Trigger: TGCAGCTGCTGTTGGAAACAAGTGCAGATAACCAGC...CTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGAACTTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS TCA 90 bp TGGAGGCAGTCATTGAGAGCTACAAAATCAGCACTCGGTTTCTCCTaGGTGATTAAAATCTTTACTTTATTAAGAGCCTTCTTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: WRQSLRATKSALGFS*VIKIFTLLRAFLAP
Trigger: GGGAGCCAAGAAGGCTCTTAATAAAGTAAAGATTTTAATCACTCAGGAGAAACCGAGTGCTGATTTTGTAGCTCTCAATGACTGCCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS-3UTR CAA 90 bp ATACAAAGTTCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGCGCCTGTTCTCTCGATaGCAATCACACCAACTGTTT +
Preference number: 5 (lower is better)
Translates to: IQSSAMSKAKNPPRPQEKRLFSR*QSHQLF
Trigger: AAACAGTTGGTGTGATTGCAATCGAGAGAACAGGCG...CTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGAACTTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp TCTCTAAGAAGAGTGCAAGTTCTAATATCCCATAATTCCAGGGGCTTATCTTTGGCATGTGATTCCTTTTaGAAGGCAGATAGGCTAACT +
Preference number: 5 (lower is better)
Translates to: SLRRVQVLISHNSRGLSLACDSF*KADRLT
Trigger: AGTTAGCCTATCTGCCTTCAAAAAGGAATCACATGC...CAAAGATAAGCCCCTGGAATTATGGGATATTAGAACTTGCACTCTTCTTAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS-3UTR CAA 90 bp ATACAAAGTTCAGCAATGTCTAAAGCAAAGAATCCACCACGTCCTCAAGAAAAGTCCAGGGGCTTATCTTaGAAAACAACTGCCAAATAC +
Preference number: 5 (lower is better)
Translates to: IQSSAMSKAKNPPRPQEKSRGLS*KTTAKY
Trigger: GTATTTGGCAGTTGTTTTCAAAGATAAGCCCCTGGA...CTTTTCTTGAGGACGTGGTGGATTCTTTGCTTTAGACATTGCTGAACTTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS CCA 90 bp ACCTTAACAATATCAGCTTTATGTTTTTCTAGAACTTGTAGAGTTTaGGCAGTATTGGAATCGATCACTACCACCAGTGAATGGCATCCA +
Preference number: 5 (lower is better)
Translates to: TLTISALCFSRTCRV*AVLESITTTSEWHP
Trigger: TGGATGCCATTCACTGGTGGTAGTGATCGATTCCAATACTGCCCAAACTCTACAAGTTCTAGAAAAACATAAAGCTGATATTGTTAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp ACAAAGGTGGGAAATGTACAAAGAGGCTTCAGAAATGAGGTTTCTGGAACATATTCGTGTGATCATAAGTaGACCGTTTTACTTCCTGTA +
Preference number: 5 (lower is better)
Translates to: TKVGNVQRGFRNEVSGTYSCDHK*TVLLPV
Trigger: TACAGGAAGTAAAACGGTCAACTTATGATCACACGA...ATATGTTCCAGAAACCTCATTTCTGAAGCCTCTTTGTACATTTCCCACCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS CCA 90 bp TATCAGCTTTATGTTTTTCTAGAACTTGTAGAGTTTGGGCAGTATTaGAATCGATCACTACCACCAGTGAATGGCATCCATATGCAATTA +
Preference number: 5 (lower is better)
Translates to: YQLYVFLELVEFGQY*NRSLPPVNGIHMQL
Trigger: TAATTGCATATGGATGCCATTCACTGGTGGTAGTGATCGATTCCAATACTGCCCAAACTCTACAAGTTCTAGAAAAACATAAAGCTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS-3UTR CAA 90 bp ACAAAGGTGGGAAATGTACAAAGAGGCTTCAGAAATGAGGTTTCTGGAACATATCACCATCATTATACATaGCTATTAGCTTCTGGTTTC +
Preference number: 5 (lower is better)
Translates to: TKVGNVQRGFRNEVSGTYHHHYT*LLASGF
Trigger: GAAACCAGAAGCTAATAGCAATGTATAATGATGGTG...ATATGTTCCAGAAACCTCATTTCTGAAGCCTCTTTGTACATTTCCCACCTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS CAA 72 bp TGCCAGCCCCAGTCCACCGCCGCCTTGTTGTGCGCGTaGAGAGCCCCGGTGAGGGTGCGCGCTGACACCTTG +
Preference number: 6 (lower is better)
Translates to: CQPQSTAALLCA*RAPVRVRADTL
Trigger: CAAGGTGTCAGCGCGCACCCTCACCGGGGCTCTCAACGCGCACAACAAGGCGGCGGTGGACTGGGGCTGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS GCA 72 bp AAACCTTGCCAGCCCCAGTCCACCGCCGCCTTGTTGTaGGCGTTGAGAGCCCCGGTGAGGGTGCGCGCTGAC +
Preference number: 6 (lower is better)
Translates to: KPCQPQSTAALL*ALRAPVRVRAD
Trigger: GTCAGCGCGCACCCTCACCGGGGCTCTCAACGCGCACAACAAGGCGGCGGTGGACTGGGGCTGGCAAGGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS CAA 72 bp ATTAAACCTTGCCAGCCCCAGTCCACCGCCGCCTTGTaGTGCGCGTTGAGAGCCCCGGTGAGGGTGCGCGCT +
Preference number: 6 (lower is better)
Translates to: IKPCQPQSTAAL*CALRAPVRVRA
Trigger: AGCGCGCACCCTCACCGGGGCTCTCAACGCGCACAACAAGGCGGCGGTGGACTGGGGCTGGCAAGGTTTAAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS CAA 72 bp GCAATTAAACCTTGCCAGCCCCAGTCCACCGCCGCCTaGTTGTGCGCGTTGAGAGCCCCGGTGAGGGTGCGC +
Preference number: 6 (lower is better)
Translates to: AIKPCQPQSTAA*LCALRAPVRVR
Trigger: GCGCACCCTCACCGGGGCTCTCAACGCGCACAACAAGGCGGCGGTGGACTGGGGCTGGCAAGGTTTAATTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS CAA 90 bp ATTAAACCTTGCCAGCCCCAGTCCACCGCCGCCTTGTTGTGCGCGTaGAGAGCCCCGGTGAGGGTGCGCGCTGACACCTTGAAGTTTACG +
Preference number: 6 (lower is better)
Translates to: IKPCQPQSTAALLCA*RAPVRVRADTLKFT
Trigger: CGTAAACTTCAAGGTGTCAGCGCGCACCCTCACCGGGGCTCTCAACGCGCACAACAAGGCGGCGGTGGACTGGGGCTGGCAAGGTTTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS TCA 72 bp GCCTTCTTGGCTCCCGTGGCTGCGGCCAGCTTGTTATaGGCTGGGCTGGAGTGTGGGCTGGAGATGTACACT +
Preference number: 6 (lower is better)
Translates to: AFLAPVAAASLL*AGLECGLEMYT
Trigger: AGTGTACATCTCCAGCCCACACTCCAGCCCAGCTCATAACAAGCTGGCCGCAGCCACGGGAGCCAAGAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS TCA 72 bp GGGTGGATAGCGAGCAGCAAGTCTCGGGAAGCGTCCTaGTTCCACAGCCACTGCACATCTTGGATGGGCTTC +
Preference number: 6 (lower is better)
Translates to: GWIASSKSREAS*FHSHCTSWMGF
Trigger: GAAGCCCATCCAAGATGTGCAGTGGCTGTGGAATCAGGACGCTTCCCGAGACTTGCTGCTCGCTATCCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS TCA 72 bp GCACATTCGGATGGCAAACTGAGGGGAAGGGAGTCCTaGGAGCAGTCCCGTCAGCAGGAACTTGAGGTGCAC +
Preference number: 6 (lower is better)
Translates to: AHSDGKLRGRES*EQSRQQELEVH
Trigger: GTGCACCTCAAGTTCCTGCTGACGGGACTGCTCTCAGGACTCCCTTCCCCTCAGTTTGCCATCCGAATGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
ENSMUST00000206442.2
CDS CCA 72 bp CTTGGCTCCCGTGGCTGCGGCCAGCTTGTTATGAGCTaGGCTGGAGTGTGGGCTGGAGATGTACACTTTCTT +
Preference number: 6 (lower is better)
Translates to: LGSRGCGQLVMS*AGVWAGDVHFL
Trigger: AAGAAAGTGTACATCTCCAGCCCACACTCCAGCCCAGCTCATAACAAGCTGGCCGCAGCCACGGGAGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS CAA 72 bp GAAGGGAGTCCTGAGAGCAGTCCCGTCAGCAGGAACTaGAGGTGCACTTCCTGCAGAATGGAGCCTTTGGGG +
Preference number: 6 (lower is better)
Translates to: EGSPESSPVSRN*RCTSCRMEPLG
Trigger: CCCCAAAGGCTCCATTCTGCAGGAAGTGCACCTCAAGTTCCTGCTGACGGGACTGCTCTCAGGACTCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS CAA 90 bp CAGCAAGTCTCGGGAAGCGTCCTGATTCCACAGCCACTGCACATCTaGGATGGGCTTCACGTGCTCTTGGATCTCACACTGGGCTACTCC +
Preference number: 6 (lower is better)
Translates to: QQVSGSVLIPQPLHI*DGLHVLLDLTLGYS
Trigger: GGAGTAGCCCAGTGTGAGATCCAAGAGCACGTGAAGCCCATCCAAGATGTGCAGTGGCTGTGGAATCAGGACGCTTCCCGAGACTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS GCA 72 bp TTCCACAGCCACTGCACATCTTGGATGGGCTTCACGTaGTCTTGGATCTCACACTGGGCTACTCCGGCTGCT +
Preference number: 6 (lower is better)
Translates to: FHSHCTSWMGFT*SWISHWATPAA
Trigger: AGCAGCCGGAGTAGCCCAGTGTGAGATCCAAGAGCACGTGAAGCCCATCCAAGATGTGCAGTGGCTGTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS CCA 72 bp CCCAGTGACATCCGCAGAAGCCAAGCGCAGGCAGTATaGAGAGCCGATGTTATGGTGATAGTTCTCCCTGGC +
Preference number: 6 (lower is better)
Translates to: PSDIRRSQAQAV*RADVMVIVLPG
Trigger: GCCAGGGAGAACTATCACCATAACATCGGCTCTCCATACTGCCTGCGCTTGGCTTCTGCGGATGTCACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS CCA 72 bp AGCCACTGCACATCTTGGATGGGCTTCACGTGCTCTTaGATCTCACACTGGGCTACTCCGGCTGCTACATCC +
Preference number: 6 (lower is better)
Translates to: SHCTSWMGFTCS*ISHWATPAATS
Trigger: GGATGTAGCAGCCGGAGTAGCCCAGTGTGAGATCCAAGAGCACGTGAAGCCCATCCAAGATGTGCAGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS GCA 72 bp TCTAAAGCCGAGGCTCTTCAGGCTCCGGGCATAGTCTaGGTAGATGGCAGCAATGAGCTTCTCTGTGTCCTC +
Preference number: 6 (lower is better)
Translates to: SKAEALQAPGIV*VDGSNELLCVL
Trigger: GAGGACACAGAGAAGCTCATTGCTGCCATCTACGCAGACTATGCCCGGAGCCTGAAGAGCCTCGGCTTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS CAA 72 bp GCAGAATGGAGCCTTTGGGGTGTTCTTCCCCAGCAATaGCACTCTGCCCTGTTCCGTGCATTTCGACTGCAC +
Preference number: 6 (lower is better)
Translates to: AEWSLWGVLPQQ*HSALFRAFRLH
Trigger: GTGCAGTCGAAATGCACGGAACAGGGCAGAGTGCAATTGCTGGGGAAGAACACCCCAAAGGCTCCATTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS CAA 90 bp CTGATTCCACAGCCACTGCACATCTTGGATGGGCTTCACGTGCTCTaGGATCTCACACTGGGCTACTCCGGCTGCTACATCCCAGACAAT +
Preference number: 6 (lower is better)
Translates to: LIPQPLHILDGLHVL*DLTLGYSGCYIPDN
Trigger: ATTGTCTGGGATGTAGCAGCCGGAGTAGCCCAGTGTGAGATCCAAGAGCACGTGAAGCCCATCCAAGATGTGCAGTGGCTGTGGAATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS GCA 72 bp CACGTGCTCTTGGATCTCACACTGGGCTACTCCGGCTaGTACATCCCAGACAATGATCTTCCCAGTGACATC +
Preference number: 6 (lower is better)
Translates to: HVLLDLTLGYSG*YIPDNDLPSDI
Trigger: GATGTCACTGGGAAGATCATTGTCTGGGATGTAGCAGCCGGAGTAGCCCAGTGTGAGATCCAAGAGCACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS GCA 72 bp TGCGTAGCTCTTCTTCCACAGCTTGGTGCCTGTGTCTaGATTCCACAGCACGATGTAATTAGGCGGGTGGAT +
Preference number: 6 (lower is better)
Translates to: CVALLPQLGACV*IPQHDVIRRVD
Trigger: ATCCACCCGCCTAATTACATCGTGCTGTGGAATGCAGACACAGGCACCAAGCTGTGGAAGAAGAGCTACGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS CAA 90 bp GACACACCGGAACTGTTCCGTGCATTTCGACTGCACACAGCAGACTaGAGTTCCCATATCATGACTCTGCCGTCGCTTACTATGAGGGCA +
Preference number: 6 (lower is better)
Translates to: DTPELFRAFRLHTAD*SSHIMTLPSLTMRA
Trigger: TGCCCTCATAGTAAGCGACGGCAGAGTCATGATATGGGAACTCAAGTCTGCTGTGTGCAGTCGAAATGCACGGAACAGTTCCGGTGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS CAA 90 bp TTGCACTCTGCCCTGTTCCGTGCATTTCGACTGCACACAGCAGACTaGAGTTCCCATATCATGACTCTGCCGTCGCTTACTATGAGGGCA +
Preference number: 6 (lower is better)
Translates to: LHSALFRAFRLHTAD*SSHIMTLPSLTMRA
Trigger: TGCCCTCATAGTAAGCGACGGCAGAGTCATGATATGGGAACTCAAGTCTGCTGTGTGCAGTCGAAATGCACGGAACAGGGCAGAGTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148752.8
CDS TCA 72 bp CTCATTCAACAAATCTCTGCCAGCCGCTCCAGCTTTTaGAGCAAAACGCACTGCTCCCTGTCTAAAGCCGAG +
Preference number: 6 (lower is better)
Translates to: LIQQISASRSSF*SKTHCSLSKAE
Trigger: CTCGGCTTTAGACAGGGAGCAGTGCGTTTTGCTTCAAAAGCTGGAGCGGCTGGCAGAGATTTGTTGAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS GCA 72 bp CTTCCTTGGTGGACCCAAGCTCATTCAACAAATCTCTaGCAGCCGCTCCAGCTTTTGAAGCAAAACGCACTG +
Preference number: 6 (lower is better)
Translates to: LPWWTQAHSTNL*QPLQLLKQNAL
Trigger: CAGTGCGTTTTGCTTCAAAAGCTGGAGCGGCTGGCAGAGATTTGTTGAATGAGCTTGGGTCCACCAAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS TCA 72 bp CAGCCATTTTCATGTAGGCAAAACAAGCCATCTCGCTaGGAGCATGGTATTACCTGCAGAAAGGGAACGCCT +
Preference number: 6 (lower is better)
Translates to: QPFSCRQNKPSR*EHGITCRKGTP
Trigger: AGGCGTTCCCTTTCTGCAGGTAATACCATGCTCTCAGCGAGATGGCTTGTTTTGCCTACATGAAAATGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS TCA 72 bp AAGGCGAGACACGGACCTGTTGGGAGATCAACCAGCTaGAGTTCATTTCTTACTAACCCCATGTTGTTTGGG +
Preference number: 6 (lower is better)
Translates to: KARHGPVGRSTS*SSFLTNPMLFG
Trigger: CCCAAACAACATGGGGTTAGTAAGAAATGAACTTCAGCTGGTTGATCTCCCAACAGGTCCGTGTCTCGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206442.2
CDS CCA 72 bp TGGGCAGTATTGGAATCGATCACTACCACCAGTGAATaGCATCCATATGCAATTAAACCTTGCCAGCCCCAG +
Preference number: 6 (lower is better)
Translates to: WAVLESITTTSE*HPYAIKPCQPQ
Trigger: CTGGGGCTGGCAAGGTTTAATTGCATATGGATGCCATTCACTGGTGGTAGTGATCGATTCCAATACTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS CAA 72 bp TACCCCAACCTTTCAGGAAGGCGAGACACGGACCTGTaGGGAGATCAACCAGCTGAAGTTCATTTCTTACTA +
Preference number: 6 (lower is better)
Translates to: YPNLSGRRDTDL*GDQPAEVHFLL
Trigger: TAGTAAGAAATGAACTTCAGCTGGTTGATCTCCCAACAGGTCCGTGTCTCGCCTTCCTGAAAGGTTGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206442.2
CDS CAA 90 bp ATGATACACTACCCCAACCTTTCAGGAAGGCGAGACACGGACCTGTaGGGAGATCAACCAGCTGAAGTTCATTTCTTACTAACCCCATGT +
Preference number: 6 (lower is better)
Translates to: MIHYPNLSGRRDTDL*GDQPAEVHFLLTPC
Trigger: ACATGGGGTTAGTAAGAAATGAACTTCAGCTGGTTGATCTCCCAACAGGTCCGTGTCTCGCCTTCCTGAAAGGTTGGGGTAGTGTATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206442.2
CDS CAA 90 bp GAGAGCATGGTATTACCTGCAGAAAGGGAACGCCTGTTCTCTCGATaGCAATCACACCAACTGTTTGATTCACTTCCAGGTCAAGGATTA +
Preference number: 6 (lower is better)
Translates to: ESMVLPAERERLFSR*QSHQLFDSLPGQGL
Trigger: TAATCCTTGACCTGGAAGTGAATCAAACAGTTGGTGTGATTGCAATCGAGAGAACAGGCGTTCCCTTTCTGCAGGTAATACCATGCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS TCA 72 bp TTTTTGAAGGCAGATAGGCTAACTGGAGGCAGTCATTaGGAGCTACAAAATCAGCACTCGGTTTCTCCTGAG +
Preference number: 6 (lower is better)
Translates to: FLKADRLTGGSH*ELQNQHSVSPE
Trigger: CTCAGGAGAAACCGAGTGCTGATTTTGTAGCTCTCAATGACTGCCTCCAGTTAGCCTATCTGCCTTCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS CAA 72 bp GTATTACCTGCAGAAAGGGAACGCCTGTTCTCTCGATaGCAATCACACCAACTGTTTGATTCACTTCCAGGT +
Preference number: 6 (lower is better)
Translates to: VLPAERERLFSR*QSHQLFDSLPG
Trigger: ACCTGGAAGTGAATCAAACAGTTGGTGTGATTGCAATCGAGAGAACAGGCGTTCCCTTTCTGCAGGTAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS GCA 72 bp AGATGCTGTTATAAGACCTCCGGACACGTAAGGTTATaGAGCCATTTTCATGTAGGCAAAACAAGCCATCTC +
Preference number: 6 (lower is better)
Translates to: RCCYKTSGHVRL*SHFHVGKTSHL
Trigger: GAGATGGCTTGTTTTGCCTACATGAAAATGGCTGCATAACCTTACGTGTCCGGAGGTCTTATAACAGCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084519.7
ENSMUST00000148752.8
CDS CCA 72 bp TATGTTTTTCTAGAACTTGTAGAGTTTGGGCAGTATTaGAATCGATCACTACCACCAGTGAATGGCATCCAT +
Preference number: 6 (lower is better)
Translates to: YVFLELVEFGQY*NRSLPPVNGIH
Trigger: ATGGATGCCATTCACTGGTGGTAGTGATCGATTCCAATACTGCCCAAACTCTACAAGTTCTAGAAAAACATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS CAA 72 bp TTATGTTTTTCTAGAACTTGTAGAGTTTGGGCAGTATaGGAATCGATCACTACCACCAGTGAATGGCATCCA +
Preference number: 6 (lower is better)
Translates to: LCFSRTCRVWAV*ESITTTSEWHP
Trigger: TGGATGCCATTCACTGGTGGTAGTGATCGATTCCAATACTGCCCAAACTCTACAAGTTCTAGAAAAACATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7
CDS CAA 90 bp ATATCAGCTTTATGTTTTTCTAGAACTTGTAGAGTTTGGGCAGTATaGGAATCGATCACTACCACCAGTGAATGGCATCCATATGCAATT +
Preference number: 6 (lower is better)
Translates to: ISALCFSRTCRVWAV*ESITTTSEWHPYAI
Trigger: AATTGCATATGGATGCCATTCACTGGTGGTAGTGATCGATTCCAATACTGCCCAAACTCTACAAGTTCTAGAAAAACATAAAGCTGATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084519.7