Pregenerated sensors for WDR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005103Ensembl transcript IDs: ENSMUST00000005234.13, ENSMUST00000201260.4
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGAATGCTGGCGGCTGTAGAGCGGCTCCTCCTCTCCAGTGCAAATaGATCCTGCATGGGGAAGGGGAGCCCTGGCCTGCTCCCTACCCA | + |
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Preference number: 1 (lower is better) Translates to: QNAGGCRAAPPLQCK*ILHGEGEPWPAPYP Trigger: TGGGTAGGGAGCAGGCCAGGGCTCCCCTTCCCCATGCAGGATGCATTTGCACTGGAGAGGAGGAGCCGCTCTACAGCCGCCAGCATTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| 3UTR GCA 90 bp | CCCAGCCTCCTGAGAAGCTGCAAGAGCCACAGGGGCTTGGGTCTGTaGTTTGGAGGCTGCTGCCTCTGGAATGTTCCACGCTCTCATGGT | + |
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Preference number: 1 (lower is better) Translates to: PSLLRSCKSHRGLGL*FGGCCLWNVPRSHG Trigger: ACCATGAGAGCGTGGAACATTCCAGAGGCAGCAGCCTCCAAAGCACAGACCCAAGCCCCTGTGGCTCTTGCAGCTTCTCAGGAGGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| 3UTR TCA 90 bp | AACTGTCTAAAGCTCTCAGAAGGACGCGTACAGACACGGACACCCTaGAGAGAGGAGGGTACTCGTAGGCCCTCCCTACTCCCAGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: NCLKLSEGRVQTRTP*REEGTRRPSLLPEQ Trigger: CTGCTCTGGGAGTAGGGAGGGCCTACGAGTACCCTCCTCTCTTCAGGGTGTCCGTGTCTGTACGCGTCCTTCTGAGAGCTTTAGACAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
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| 3UTR CCA 90 bp | CGTGACCAGGACACCTCAGTCTGGCTAACAAGGGCTCTACTTATCTaGACAAGGTACTGTCAGCGTGCCAGGTCAGGAACAAGACAGACA | + |
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Preference number: 1 (lower is better) Translates to: RDQDTSVWLTRALLI*TRYCQRARSGTRQT Trigger: TGTCTGTCTTGTTCCTGACCTGGCACGCTGACAGTACCTTGTCCAGATAAGTAGAGCCCTTGTTAGCCAGACTGAGGTGTCCTGGTCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| 3UTR TCA 90 bp | TCACAAGTGCAAGGGGAGGGATTGTTCTCAGCCAACATTTACCAGTaGTTCCGACACACGCAAAGAAACTGCCAATCACGGGGCTTTATA | + |
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Preference number: 1 (lower is better) Translates to: SQVQGEGLFSANIYQ*FRHTQRNCQSRGFI Trigger: TATAAAGCCCCGTGATTGGCAGTTTCTTTGCGTGTGTCGGAATCACTGGTAAATGTTGGCTGAGAACAATCCCTCCCCTTGCACTTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| 3UTR-3UTR CCA 90 bp | GGAAGAGACAGGGAAACACTGAAGCATGGTAATCACGTGACCAGGACACCTCAGGGGGAAGGGGAGCCCTaGCCTGCTCCCTACCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: GRDRETLKHGNHVTRTPQGEGEP*PAPYPA Trigger: GGCTGGGTAGGGAGCAGGCCAGGGCTCCCCTTCCCC...CTGAGGTGTCCTGGTCACGTGATTACCATGCTTCAGTGTTTCCCTGTCTCTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| 3UTR-3UTR TCA 90 bp | GACGCGTACAGACACGGACACCCTGAAGAGAGGAGGGTACTCGTAGGCCCTCCCTTAAACTCTAGTCCCTaGTTCGGTCCTTGGGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: DAYRHGHPEERRVLVGPPLNSSP*FGPWGE Trigger: CTCACCCCAAGGACCGAATCAGGGACTAGAGTTTAA...GGGAGGGCCTACGAGTACCCTCCTCTCTTCAGGGTGTCCGTGTCTGTACGCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
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| 3UTR-3UTR GCA 90 bp | TCAAGGTTCACATGTCCCCATGGGATCTGGGGATGGGTCCAGGGAGGCAGCCATTGCTTTGGAGGCTGCTaGCTCTGGAATGTTCCACGC | + |
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Preference number: 2 (lower is better) Translates to: SRFTCPHGIWGWVQGGSHCFGGC*LWNVPR Trigger: GCGTGGAACATTCCAGAGGCAGCAGCCTCCAAAGCA...ATGGCTGCCTCCCTGGACCCATCCCCAGATCCCATGGGGACATGTGAACCTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| 3UTR-3UTR CCA 90 bp | GGAAGAGACAGGGAAACACTGAAGCATGGTAATCACGTGACCAGGACACCTCAGTGTCCCCATGGGATCTaGGGATGGGTCCAGGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: GRDRETLKHGNHVTRTPQCPHGI*GWVQGG Trigger: GCCTCCCTGGACCCATCCCCAGATCCCATGGGGACA...CTGAGGTGTCCTGGTCACGTGATTACCATGCTTCAGTGTTTCCCTGTCTCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| 3UTR-3UTR GCA 90 bp | GGAAGAGACAGGGAAACACTGAAGCATGGTAATCACGTGACCAGGACACCTCAGAGGGGCTTGGGTCTGTaGTTTGGAGGCTGCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: GRDRETLKHGNHVTRTPQRGLGL*FGGCCL Trigger: GAGGCAGCAGCCTCCAAAGCACAGACCCAAGCCCCT...CTGAGGTGTCCTGGTCACGTGATTACCATGCTTCAGTGTTTCCCTGTCTCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| 3UTR-3UTR TCA 90 bp | CTGTCTAAAGCTCTCAGAAGGACGCGTACAGACACGGACACCCTGAAGAGAGGATTAAACTCTAGTCCCTaGTTCGGTCCTTGGGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: LSKALRRTRTDTDTLKRGLNSSP*FGPWGE Trigger: CTCACCCCAAGGACCGAATCAGGGACTAGAGTTTAA...TCCTCTCTTCAGGGTGTCCGTGTCTGTACGCGTCCTTCTGAGAGCTTTAGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
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| 3UTR-3UTR GCA 90 bp | AACATCTTCTTGTCCTTAATCTCTGCTCTTGGGGCCAGAGTTGGGAAGAGACAGAGCCTCCTGAGAAGCTaGAAGAGCCACAGGGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: NIFLSLISALGARVGKRQSLLRS*KSHRGL Trigger: CAAGCCCCTGTGGCTCTTGCAGCTTCTCAGGAGGCT...CTGTCTCTTCCCAACTCTGGCCCCAAGAGCAGAGATTAAGGACAAGAAGATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| 3UTR-3UTR TCA 90 bp | AGGTACTGTCAGCGTGCCAGGTCAGGAACAAGACAGACAACAGTCAAGATACATAGGGAGGCAGCCATGTaGCATGACTTACACCGAGAA | + |
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Preference number: 2 (lower is better) Translates to: RYCQRARSGTRQTTVKIHREAAM*HDLHRE Trigger: TTCTCGGTGTAAGTCATGTCACATGGCTGCCTCCCT...ATGTATCTTGACTGTTGTCTGTCTTGTTCCTGACCTGGCACGCTGACAGTACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| 3UTR-3UTR GCA 90 bp | ATCAAGGTTCACATGTCCCCATGGGATCTGGGGATGGGTCCAGGGAGGCAGCCATGCTGTTTAAGTGCTTaGTTTATTTCTCATGTGCAA | + |
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Preference number: 2 (lower is better) Translates to: IKVHMSPWDLGMGPGRQPCCLSA*FISHVQ Trigger: TTGCACATGAGAAATAAAGCAAGCACTTAAACAGCA...TGGCTGCCTCCCTGGACCCATCCCCAGATCCCATGGGGACATGTGAACCTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| 3UTR-3UTR GCA 90 bp | AAAGCGTTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGATTGTTCTCAGCCAACAAGGTACTGTCAGCGTaGCAGGTCAGGAACAAGACA | + |
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Preference number: 2 (lower is better) Translates to: KAFKVFSQVQGEGLFSANKVLSA*QVRNKT Trigger: TGTCTTGTTCCTGACCTGGCACGCTGACAGTACCTT...GTTGGCTGAGAACAATCCCTCCCCTTGCACTTGTGAAAACACTTTGAACGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| 3UTR-3UTR CCA 90 bp | TTCCGACACACGCAAAGAAACTGCCAATCACGGGGCTTTATACTTACTTTAATTGTTCACATGTCCCCATaGGATCTGGGGATGGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: FRHTQRNCQSRGFILTLIVHMSP*DLGMGP Trigger: TGGACCCATCCCCAGATCCCATGGGGACATGTGAAC...AATTAAAGTAAGTATAAAGCCCCGTGATTGGCAGTTTCTTTGCGTGTGTCGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| 3UTR-3UTR CCA 90 bp | AACATGACAAATTACAGTAACATCTTCTTGTCCTTAATCTCTGCTCTTGGGGCCCAGGACACCTCAGTCTaGCTAACAAGGGCTCTACTT | + |
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Preference number: 2 (lower is better) Translates to: NMTNYSNIFLSLISALGAQDTSV*LTRALL Trigger: AAGTAGAGCCCTTGTTAGCCAGACTGAGGTGTCCTG...GGCCCCAAGAGCAGAGATTAAGGACAAGAAGATGTTACTGTAATTTGTCATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| 3UTR CAA 90 bp | GTGGGCTGTAAGGTTTTAGGTACGCTCCACATGCTGTTTAAGTGCTaGCTTTATTTCTCATGTGCAAACTGTAACTGTCTAAAGCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: VGCKVLGTLHMLFKC*LYFSCANCNCLKLS Trigger: TGAGAGCTTTAGACAGTTACAGTTTGCACATGAGAAATAAAGCAAGCACTTAAACAGCATGTGGAGCGTACCTAAAACCTTACAGCCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| 3UTR GCA 72 bp | CAAATGCATCCTGCATGGGGAAGGGGAGCCCTGGCCTaGTCCCTACCCAGCCTCCTGAGAAGCTGCAAGAGC | + |
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Preference number: 3 (lower is better) Translates to: QMHPAWGRGALA*SLPSLLRSCKS Trigger: GCTCTTGCAGCTTCTCAGGAGGCTGGGTAGGGAGCAGGCCAGGGCTCCCCTTCCCCATGCAGGATGCATTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| 3UTR GCA 72 bp | AATGCTGGCGGCTGTAGAGCGGCTCCTCCTCTCCAGTaGAAATGCATCCTGCATGGGGAAGGGGAGCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: NAGGCRAAPPLQ*KCILHGEGEPW Trigger: CCAGGGCTCCCCTTCCCCATGCAGGATGCATTTGCACTGGAGAGGAGGAGCCGCTCTACAGCCGCCAGCATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| 3UTR-3UTR CAA 90 bp | ATCAAGGTTCACATGTCCCCATGGGATCTGGGGATGGGTCCAGGGAGGCAGCCAAAGAGCCACAGGGGCTaGGGTCTGTGCTTTGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: IKVHMSPWDLGMGPGRQPKSHRG*GLCFGG Trigger: GCCTCCAAAGCACAGACCCAAGCCCCTGTGGCTCTT...TGGCTGCCTCCCTGGACCCATCCCCAGATCCCATGGGGACATGTGAACCTTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| 3UTR GCA 72 bp | AGCCACAGGGGCTTGGGTCTGTGCTTTGGAGGCTGCTaGCTCTGGAATGTTCCACGCTCTCATGGTCTGGTG | + |
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Preference number: 3 (lower is better) Translates to: SHRGLGLCFGGC*LWNVPRSHGLV Trigger: CACCAGACCATGAGAGCGTGGAACATTCCAGAGGCAGCAGCCTCCAAAGCACAGACCCAAGCCCCTGTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| 3UTR CCA 72 bp | AGGGGCTTGGGTCTGTGCTTTGGAGGCTGCTGCCTCTaGAATGTTCCACGCTCTCATGGTCTGGTGGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: RGLGLCFGGCCL*NVPRSHGLVGC Trigger: ACAGCCCACCAGACCATGAGAGCGTGGAACATTCCAGAGGCAGCAGCCTCCAAAGCACAGACCCAAGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| 3UTR-3UTR CAA 90 bp | CCAGGACACCTCAGTCTGGCTAACAAGGGCTCTACTTATCTGGACAAGGTACTGGCTTGGGTCTGTGCTTaGGAGGCTGCTGCCTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: PGHLSLANKGSTYLDKVLAWVCA*EAAASG Trigger: TCCAGAGGCAGCAGCCTCCAAAGCACAGACCCAAGC...CAGTACCTTGTCCAGATAAGTAGAGCCCTTGTTAGCCAGACTGAGGTGTCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| 3UTR CCA 72 bp | GACACCTCAGTCTGGCTAACAAGGGCTCTACTTATCTaGACAAGGTACTGTCAGCGTGCCAGGTCAGGAACA | + |
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Preference number: 3 (lower is better) Translates to: DTSVWLTRALLI*TRYCQRARSGT Trigger: TGTTCCTGACCTGGCACGCTGACAGTACCTTGTCCAGATAAGTAGAGCCCTTGTTAGCCAGACTGAGGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| 3UTR-3UTR CAA 90 bp | CACAGGGGCTTGGGTCTGTGCTTTGGAGGCTGCTGCCTCTGGAATGTTCCACGCATGCTGTTTAAGTGCTaGCTTTATTTCTCATGTGCA | + |
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Preference number: 3 (lower is better) Translates to: HRGLGLCFGGCCLWNVPRMLFKC*LYFSCA Trigger: TGCACATGAGAAATAAAGCAAGCACTTAAACAGCAT...GCGTGGAACATTCCAGAGGCAGCAGCCTCCAAAGCACAGACCCAAGCCCCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| CDS-3UTR TCA 90 bp | AGGAGGGTACTCGTAGGCCCTCCCTACTCCCAGAGCAGGCAGGAAGGGGAGCGTGCCAGGCCAGGCTGCTaGCGTGGTGCAGCCGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: RRVLVGPPYSQSRQEGERARPGC*RGAAGE Trigger: CTCACCGGCTGCACCACGTCAGCAGCCTGGCCTGGC...ACGCTCCCCTTCCTGCCTGCTCTGGGAGTAGGGAGGGCCTACGAGTACCCTCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
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| CDS-3UTR TCA 90 bp | GCGTACAGACACGGACACCCTGAAGAGAGGAGGGTACTCGTAGGCCCTCCCTACGCCAGGCCAGGCTGCTaGCGTGGTGCAGCCGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: AYRHGHPEERRVLVGPPYARPGC*RGAAGE Trigger: CTCACCGGCTGCACCACGTCAGCAGCCTGGCCTGGC...GTAGGGAGGGCCTACGAGTACCCTCCTCTCTTCAGGGTGTCCGTGTCTGTACGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
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| CDS-3UTR CCA 90 bp | ATCAAGGTTCACATGTCCCCATGGGATCTGGGGATGGGTCCAGGGAGGCAGCCAACGCCCCGCTCCACCTaGGGGAGGCTGGCGAACACC | + |
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Preference number: 4 (lower is better) Translates to: IKVHMSPWDLGMGPGRQPTPRST*GRLANT Trigger: GGTGTTCGCCAGCCTCCCCCAGGTGGAGCGGGGCGT...TGGCTGCCTCCCTGGACCCATCCCCAGATCCCATGGGGACATGTGAACCTTGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| CDS-3UTR GCA 90 bp | AGGAGGGTACTCGTAGGCCCTCCCTACTCCCAGAGCAGGCAGGAAGGGGAGCGTCAGAGGCAGCCCAGCTaGTGGTCCAGAACATTGGAG | + |
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Preference number: 4 (lower is better) Translates to: RRVLVGPPYSQSRQEGERQRQPS*WSRTLE Trigger: CTCCAATGTTCTGGACCAGCAGCTGGGCTGCCTCTG...ACGCTCCCCTTCCTGCCTGCTCTGGGAGTAGGGAGGGCCTACGAGTACCCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
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| CDS-3UTR GCA 90 bp | GACGCGTACAGACACGGACACCCTGAAGAGAGGAGGGTACTCGTAGGCCCTCCCCAGAGGCAGCCCAGCTaGTGGTCCAGAACATTGGAG | + |
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Preference number: 4 (lower is better) Translates to: DAYRHGHPEERRVLVGPPQRQPS*WSRTLE Trigger: CTCCAATGTTCTGGACCAGCAGCTGGGCTGCCTCTG...GGGAGGGCCTACGAGTACCCTCCTCTCTTCAGGGTGTCCGTGTCTGTACGCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
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| CDS-3UTR GCA 90 bp | TCTACACAGAATGCTGGCGGCTGTAGAGCGGCTCCTCCTCTCCAGTGCAAATGCGTGTCCCCACCAGGGTaGACAGCGACGACTTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: STQNAGGCRAAPPLQCKCVSPPG*TATTSG Trigger: GCCTGAAGTCGTCGCTGTGCACCCTGGTGGGGACAC...GCATTTGCACTGGAGAGGAGGAGCCGCTCTACAGCCGCCAGCATTCTGTGTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| CDS-3UTR CCA 90 bp | CAAGGTTCACATGTCCCCATGGGATCTGGGGATGGGTCCAGGGAGGCAGCCATGGAGATGCTGAGGAGGTaGTCCTTCTGCCAGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: QGSHVPMGSGDGSREAAMEMLRR*SFCQRQ Trigger: CTGCCTCTGGCAGAAGGACCACCTCCTCAGCATCTC...CATGGCTGCCTCCCTGGACCCATCCCCAGATCCCATGGGGACATGTGAACCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| CDS-3UTR TCA 90 bp | CAAGGTTCACATGTCCCCATGGGATCTGGGGATGGGTCCAGGGAGGCAGCCATGTGTAGTCCCTCAGTGTaGGGTTGGTGTACCGCACTG | + |
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Preference number: 4 (lower is better) Translates to: QGSHVPMGSGDGSREAAMCSPSV*GWCTAL Trigger: CAGTGCGGTACACCAACCTCACACTGAGGGACTACA...CATGGCTGCCTCCCTGGACCCATCCCCAGATCCCATGGGGACATGTGAACCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| CDS-3UTR TCA 90 bp | GCGTACAGACACGGACACCCTGAAGAGAGGAGGGTACTCGTAGGCCCTCCCTACCGTCATGGGAGGTGGTaGCCAGTGTGTGTTCGTCTA | + |
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Preference number: 4 (lower is better) Translates to: AYRHGHPEERRVLVGPPYRHGRW*PVCVRL Trigger: TAGACGAACACACACTGGTCACCACCTCCCATGACG...GTAGGGAGGGCCTACGAGTACCCTCCTCTCTTCAGGGTGTCCGTGTCTGTACGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
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| CDS-3UTR TCA 90 bp | GACGCGTACAGACACGGACACCCTGAAGAGAGGAGGGTACTCGTAGGCCCTCCCGTCATCCTGGACACCTaGTTTGTGTGGCCTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: DAYRHGHPEERRVLVGPPVILDT*FVWPFP Trigger: TGGAAAAGGCCACACAAATCAGGTGTCCAGGATGAC...GGGAGGGCCTACGAGTACCCTCCTCTCTTCAGGGTGTCCGTGTCTGTACGCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
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| CDS-3UTR TCA 90 bp | GCGTACAGACACGGACACCCTGAAGAGAGGAGGGTACTCGTAGGCCCTCCCTACCATCCATGCTGCAGCTaGCCAACTGCTCAGACTCAT | + |
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Preference number: 4 (lower is better) Translates to: AYRHGHPEERRVLVGPPYHPCCS*PTAQTH Trigger: ATGAGTCTGAGCAGTTGGTCAGCTGCAGCATGGATG...GTAGGGAGGGCCTACGAGTACCCTCCTCTCTTCAGGGTGTCCGTGTCTGTACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
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| CDS-3UTR GCA 90 bp | CCCAGAGCAGGCAGGAAGGGGAGCGTTAGAGAAATAGTTAAGAGAAGGGTGCTCGTGTCCCCACCAGGGTaGACAGCGACGACTTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PRAGRKGSVREIVKRRVLVSPPG*TATTSG Trigger: GCCTGAAGTCGTCGCTGTGCACCCTGGTGGGGACAC...GAGCACCCTTCTCTTAACTATTTCTCTAACGCTCCCCTTCCTGCCTGCTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
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| CDS-3UTR TCA 90 bp | CAAGGTTCACATGTCCCCATGGGATCTGGGGATGGGTCCAGGGAGGCAGCCATGGTCATCCTGGACACCTaGTTTGTGTGGCCTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: QGSHVPMGSGDGSREAAMVILDT*FVWPFP Trigger: TGGAAAAGGCCACACAAATCAGGTGTCCAGGATGAC...CATGGCTGCCTCCCTGGACCCATCCCCAGATCCCATGGGGACATGTGAACCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| CDS-3UTR TCA 90 bp | CAGAAGGACGCGTACAGACACGGACACCCTGAAGAGAGGAGGGTACTCGTAGGCCAGGGTTGTCGATGCTaGAGCACTTCTTCTGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: QKDAYRHGHPEERRVLVGQGCRC*STSSGP Trigger: AGGACCAGAAGAAGTGCTTCAGCATCGACAACCCTG...GCCTACGAGTACCCTCCTCTCTTCAGGGTGTCCGTGTCTGTACGCGTCCTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
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| CDS-3UTR TCA 90 bp | ACTCGTAGGCCCTCCCTACTCCCAGAGCAGGCAGGAAGGGGAGCGTTAGAGAAACAGGGTTGTCGATGCTaGAGCACTTCTTCTGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: TRRPSLLPEQAGRGALEKQGCRC*STSSGP Trigger: AGGACCAGAAGAAGTGCTTCAGCATCGACAACCCTG...TTTCTCTAACGCTCCCCTTCCTGCCTGCTCTGGGAGTAGGGAGGGCCTACGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
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| CDS-3UTR TCA 90 bp | TGCTTTGGAGGCTGCTGCCTCTGGAATGTTCCACGCTCTCATGGTCTGGTGGGCGTGTTCATTATCTGGTaGCCAGGCCAGGCACACAAT | + |
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Preference number: 4 (lower is better) Translates to: CFGGCCLWNVPRSHGLVGVFIIW*PGQAHN Trigger: ATTGTGTGCCTGGCCTGGTCACCAGATAATGAACAC...GCCCACCAGACCATGAGAGCGTGGAACATTCCAGAGGCAGCAGCCTCCAAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| CDS-3UTR GCA 90 bp | GCGTACAGACACGGACACCCTGAAGAGAGGAGGGTACTCGTAGGCCCTCCCTACTGGCCTCTAGGAGTTTaGCTTCATCCTTTAGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: AYRHGHPEERRVLVGPPYWPLGV*LHPLVW Trigger: CCACACTAAAGGATGAAGGCAAACTCCTAGAGGCCA...GTAGGGAGGGCCTACGAGTACCCTCCTCTCTTCAGGGTGTCCGTGTCTGTACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
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| CDS-3UTR CCA 90 bp | CCCAGAGCAGGCAGGAAGGGGAGCGTTAGAGAAATAGTTAAGAGAAGGGTGCTCGAGATGCTGAGGAGGTaGTCCTTCTGCCAGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PRAGRKGSVREIVKRRVLEMLRR*SFCQRQ Trigger: CTGCCTCTGGCAGAAGGACCACCTCCTCAGCATCTC...GAGCACCCTTCTCTTAACTATTTCTCTAACGCTCCCCTTCCTGCCTGCTCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
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| CDS-3UTR CCA 90 bp | TCAAGGTTCACATGTCCCCATGGGATCTGGGGATGGGTCCAGGGAGGCAGCCATCTGTTACTGGTCCCTTaGCCTCTAGGAGTTTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: SRFTCPHGIWGWVQGGSHLLLVP*PLGVCL Trigger: AAGGCAAACTCCTAGAGGCCAAGGGACCAGTAACAG...ATGGCTGCCTCCCTGGACCCATCCCCAGATCCCATGGGGACATGTGAACCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| CDS-3UTR TCA 90 bp | CCCAGAGCAGGCAGGAAGGGGAGCGTTAGAGAAATAGTTAAGAGAAGGGTGCTCTGTAGTCCCTCAGTGTaGGGTTGGTGTACCGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PRAGRKGSVREIVKRRVLCSPSV*GWCTAL Trigger: CAGTGCGGTACACCAACCTCACACTGAGGGACTACA...GAGCACCCTTCTCTTAACTATTTCTCTAACGCTCCCCTTCCTGCCTGCTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS-3UTR GCA 90 bp | AGCCACAGGGGCTTGGGTCTGTGCTTTGGAGGCTGCTGCCTCTGGAATGTTCCATGGCCTCTAGGAGTTTaGCTTCATCCTTTAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SHRGLGLCFGGCCLWNVPWPLGV*LHPLVW Trigger: CCACACTAAAGGATGAAGGCAAACTCCTAGAGGCCA...TGGAACATTCCAGAGGCAGCAGCCTCCAAAGCACAGACCCAAGCCCCTGTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR CCA 90 bp | AGGAGGGTACTCGTAGGCCCTCCCTACTCCCAGAGCAGGCAGGAAGGGGAGCGTAACAGCTACACACTTTaGTTGAACATCCAGTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RRVLVGPPYSQSRQEGERNSYTL*LNIQFH Trigger: GTGAAACTGGATGTTCAACCAAAGTGTGTAGCTGTT...ACGCTCCCCTTCCTGCCTGCTCTGGGAGTAGGGAGGGCCTACGAGTACCCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS-3UTR CCA 90 bp | TGCTTTGGAGGCTGCTGCCTCTGGAATGTTCCACGCTCTCATGGTCTGGTGGGCCTTCATCCTTTAGTGTaGAGGCCAGGATGGAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: CFGGCCLWNVPRSHGLVGLHPLV*RPGWST Trigger: TGTACTCCATCCTGGCCTCCACACTAAAGGATGAAG...GCCCACCAGACCATGAGAGCGTGGAACATTCCAGAGGCAGCAGCCTCCAAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR TCA 90 bp | CCCAGAGCAGGCAGGAAGGGGAGCGTTAGAGAAATAGTTAAGAGAAGGGTGCTCAGAATCGCACACAGTTaGCAAAGCGGCTGTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PRAGRKGSVREIVKRRVLRIAHS*QSGCGH Trigger: GTGACCACAGCCGCTTTGTCAACTGTGTGCGATTCT...GAGCACCCTTCTCTTAACTATTTCTCTAACGCTCCCCTTCCTGCCTGCTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR TCA 90 bp | CAGAAGGACGCGTACAGACACGGACACCCTGAAGAGAGGAGGGTACTCGTAGGCGCTACACACTTTGGTTaGACATCCAGTTTCACAACG | + |
|
Preference number: 4 (lower is better) Translates to: QKDAYRHGHPEERRVLVGATHFG*TSSFTT Trigger: CGTTGTGAAACTGGATGTTCAACCAAAGTGTGTAGC...GCCTACGAGTACCCTCCTCTCTTCAGGGTGTCCGTGTCTGTACGCGTCCTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS-3UTR TCA 90 bp | GGAAGAGACAGGGAAACACTGAAGCATGGTAATCACGTGACCAGGACACCTCAGCGTCATGGGAGGTGGTaGCCAGTGTGTGTTCGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GRDRETLKHGNHVTRTPQRHGRW*PVCVRL Trigger: TAGACGAACACACACTGGTCACCACCTCCCATGACG...CTGAGGTGTCCTGGTCACGTGATTACCATGCTTCAGTGTTTCCCTGTCTCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR GCA 90 bp | CCCAGAGCAGGCAGGAAGGGGAGCGTTAGAGAAATAGTTAAGAGAAGGGTGCTCAGTACACACGCACATTaGCATCCGTGCCACCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PRAGRKGSVREIVKRRVLSTHAH*HPCHQQ Trigger: CTGTTGGTGGCACGGATGGCAATGTGCGTGTGTACT...GAGCACCCTTCTCTTAACTATTTCTCTAACGCTCCCCTTCCTGCCTGCTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS-3UTR GCA 90 bp | CTGTCTAAAGCTCTCAGAAGGACGCGTACAGACACGGACACCCTGAAGAGAGGAAGTACACACGCACATTaGCATCCGTGCCACCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LSKALRRTRTDTDTLKRGSTHAH*HPCHQQ Trigger: CTGTTGGTGGCACGGATGGCAATGTGCGTGTGTACT...TCCTCTCTTCAGGGTGTCCGTGTCTGTACGCGTCCTTCTGAGAGCTTTAGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS-3UTR CCA 90 bp | AGCCACAGGGGCTTGGGTCTGTGCTTTGGAGGCTGCTGCCTCTGGAATGTTCCACAATGTAGAATCCGCTaGGTGCATACTTGGCTACTA | + |
|
Preference number: 4 (lower is better) Translates to: SHRGLGLCFGGCCLWNVPQCRIR*VHTWLL Trigger: TAGTAGCCAAGTATGCACCCAGCGGATTCTACATTG...TGGAACATTCCAGAGGCAGCAGCCTCCAAAGCACAGACCCAAGCCCCTGTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR CCA 90 bp | CAGAAGGACGCGTACAGACACGGACACCCTGAAGAGAGGAGGGTACTCGTAGGCCTGAAGCACTTCTTCTaGTCCTTCAGAAGGACAATC | + |
|
Preference number: 4 (lower is better) Translates to: QKDAYRHGHPEERRVLVGLKHFF*SFRRTI Trigger: GATTGTCCTTCTGAAGGACCAGAAGAAGTGCTTCAG...GCCTACGAGTACCCTCCTCTCTTCAGGGTGTCCGTGTCTGTACGCGTCCTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS-3UTR TCA 90 bp | GGCTGCTGCCTCTGGAATGTTCCACGCTCTCATGGTCTGGTGGGCTGTAAGGTTGCTACACACTTTGGTTaGACATCCAGTTTCACAACG | + |
|
Preference number: 4 (lower is better) Translates to: GCCLWNVPRSHGLVGCKVATHFG*TSSFTT Trigger: CGTTGTGAAACTGGATGTTCAACCAAAGTGTGTAGC...AACCTTACAGCCCACCAGACCATGAGAGCGTGGAACATTCCAGAGGCAGCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR TCA 90 bp | CTGTCTAAAGCTCTCAGAAGGACGCGTACAGACACGGACACCCTGAAGAGAGGAGAGCATCTTGGATCTTaGCTTTGGTCTCTGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSKALRRTRTDTDTLKRGEHLGS*LWSLGH Trigger: GTGACCCAGAGACCAAAGTCAAGATCCAAGATGCTC...TCCTCTCTTCAGGGTGTCCGTGTCTGTACGCGTCCTTCTGAGAGCTTTAGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS-3UTR GCA 90 bp | CCCAGAGCAGGCAGGAAGGGGAGCGTTAGAGAAATAGTTAAGAGAAGGGTGCTCGTAGAATCCGCTGGGTaGATACTTGGCTACTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PRAGRKGSVREIVKRRVLVESAG*ILGYYH Trigger: GTGGTAGTAGCCAAGTATGCACCCAGCGGATTCTAC...GAGCACCCTTCTCTTAACTATTTCTCTAACGCTCCCCTTCCTGCCTGCTCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR GCA 90 bp | GGCTGCTGCCTCTGGAATGTTCCACGCTCTCATGGTCTGGTGGGCTGTAAGGTTAATAGATGTAGGACTTaGCACCATTTCTGTGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: GCCLWNVPRSHGLVGCKVNRCRT*HHFCAR Trigger: CCGTGCACAGAAATGGTGGCAAGTCCTACATCTATT...AACCTTACAGCCCACCAGACCATGAGAGCGTGGAACATTCCAGAGGCAGCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR TCA 90 bp | ACTCGTAGGCCCTCCCTACTCCCAGAGCAGGCAGGAAGGGGAGCGTTAGAGAAAATTCTCTCCTGTCTCTaGATCCCAGTAATTGATATG | + |
|
Preference number: 4 (lower is better) Translates to: TRRPSLLPEQAGRGALEKILSCL*IPVIDM Trigger: CATATCAATTACTGGGATTCAGAGACAGGAGAGAAT...TTTCTCTAACGCTCCCCTTCCTGCCTGCTCTGGGAGTAGGGAGGGCCTACGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
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| CDS-3UTR TCA 90 bp | CCTACTCCCAGAGCAGGCAGGAAGGGGAGCGTTAGAGAAATAGTTAAGAGAAGGGTGTTCATTATCTGGTaGCCAGGCCAGGCACACAAT | + |
|
Preference number: 4 (lower is better) Translates to: PTPRAGRKGSVREIVKRRVFIIW*PGQAHN Trigger: ATTGTGTGCCTGGCCTGGTCACCAGATAATGAACAC...CCTTCTCTTAACTATTTCTCTAACGCTCCCCTTCCTGCCTGCTCTGGGAGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS-3UTR GCA 90 bp | CAGAAGGACGCGTACAGACACGGACACCCTGAAGAGAGGAGGGTACTCGTAGGCTCATACTTTAGAAGATaGTCCTTCTGTGTGGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: QKDAYRHGHPEERRVLVGSYFRR*SFCVVS Trigger: GGATACCACACAGAAGGAGCATCTTCTAAAGTATGA...GCCTACGAGTACCCTCCTCTCTTCAGGGTGTCCGTGTCTGTACGCGTCCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| CDS-3UTR CCA 90 bp | AACATCTTCTTGTCCTTAATCTCTGCTCTTGGGGCCAGAGTTGGGAAGAGACAGGCTGGTCCAGAACATTaGAGCCCATGGGAAACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NIFLSLISALGARVGKRQAGPEH*SPWETC Trigger: GCACGTTTCCCATGGGCTCCAATGTTCTGGACCAGC...CTGTCTCTTCCCAACTCTGGCCCCAAGAGCAGAGATTAAGGACAAGAAGATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| CDS-3UTR CCA 90 bp | CCTACTCCCAGAGCAGGCAGGAAGGGGAGCGTTAGAGAAATAGTTAAGAGAAGGCTGTTACTGGTCCCTTaGCCTCTAGGAGTTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PTPRAGRKGSVREIVKRRLLLVP*PLGVCL Trigger: AAGGCAAACTCCTAGAGGCCAAGGGACCAGTAACAG...CCTTCTCTTAACTATTTCTCTAACGCTCCCCTTCCTGCCTGCTCTGGGAGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS-3UTR TCA 90 bp | AACATCTTCTTGTCCTTAATCTCTGCTCTTGGGGCCAGAGTTGGGAAGAGACAGCATCCATGCTGCAGCTaGCCAACTGCTCAGACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NIFLSLISALGARVGKRQHPCCS*PTAQTH Trigger: ATGAGTCTGAGCAGTTGGTCAGCTGCAGCATGGATG...CTGTCTCTTCCCAACTCTGGCCCCAAGAGCAGAGATTAAGGACAAGAAGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR GCA 90 bp | AGGTACTGTCAGCGTGCCAGGTCAGGAACAAGACAGACAACAGTCAAGATACATCTCCATCATGGGCCTTaGTTTCTCCAAGGGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: RYCQRARSGTRQTTVKIHLHHGP*FLQGHT Trigger: TGTGTGCCCTTGGAGAAAGCAAGGCCCATGATGGAG...ATGTATCTTGACTGTTGTCTGTCTTGTTCCTGACCTGGCACGCTGACAGTACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| CDS-3UTR CCA 90 bp | AAAGCGTTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGATTGTTCTCAGCCAACGGAAATGATCGCCCTTaGGGTCTCCACCGAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: KAFKVFSQVQGEGLFSANGNDRP*GLHRGS Trigger: AGATCCTCGGTGGAGACCCCAAGGGCGATCATTTCC...GTTGGCTGAGAACAATCCCTCCCCTTGCACTTGTGAAAACACTTTGAACGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR CCA 90 bp | CCTACTCCCAGAGCAGGCAGGAAGGGGAGCGTTAGAGAAATAGTTAAGAGAAGGCTTCATCCTTTAGTGTaGAGGCCAGGATGGAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PTPRAGRKGSVREIVKRRLHPLV*RPGWST Trigger: TGTACTCCATCCTGGCCTCCACACTAAAGGATGAAG...CCTTCTCTTAACTATTTCTCTAACGCTCCCCTTCCTGCCTGCTCTGGGAGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
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| CDS-3UTR TCA 90 bp | AGGTACTGTCAGCGTGCCAGGTCAGGAACAAGACAGACAACAGTCAAGATACATGAGCATCTTGGATCTTaGCTTTGGTCTCTGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RYCQRARSGTRQTTVKIHEHLGS*LWSLGH Trigger: GTGACCCAGAGACCAAAGTCAAGATCCAAGATGCTC...ATGTATCTTGACTGTTGTCTGTCTTGTTCCTGACCTGGCACGCTGACAGTACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR GCA 90 bp | CCTACTCCCAGAGCAGGCAGGAAGGGGAGCGTTAGAGAAATAGTTAAGAGAAGGAATAGATGTAGGACTTaGCACCATTTCTGTGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: PTPRAGRKGSVREIVKRRNRCRT*HHFCAR Trigger: CCGTGCACAGAAATGGTGGCAAGTCCTACATCTATT...CCTTCTCTTAACTATTTCTCTAACGCTCCCCTTCCTGCCTGCTCTGGGAGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
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| CDS-3UTR CCA 90 bp | CCCAGAGCAGGCAGGAAGGGGAGCGTTAGAGAAATAGTTAAGAGAAGGGTGCTCTTCCCAGCGAAAGGCTaGTACTCATACTTTAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRAGRKGSVREIVKRRVLFPAKG*YSYFRR Trigger: TCTTCTAAAGTATGAGTACCAGCCTTTCGCTGGGAA...GAGCACCCTTCTCTTAACTATTTCTCTAACGCTCCCCTTCCTGCCTGCTCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| CDS-3UTR CCA 90 bp | CCTACTCCCAGAGCAGGCAGGAAGGGGAGCGTTAGAGAAATAGTTAAGAGAAGGCTGAAGCACTTCTTCTaGTCCTTCAGAAGGACAATC | + |
|
Preference number: 4 (lower is better) Translates to: PTPRAGRKGSVREIVKRRLKHFF*SFRRTI Trigger: GATTGTCCTTCTGAAGGACCAGAAGAAGTGCTTCAG...CCTTCTCTTAACTATTTCTCTAACGCTCCCCTTCCTGCCTGCTCTGGGAGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
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| CDS-3UTR TCA 90 bp | TTCCGACACACGCAAAGAAACTGCCAATCACGGGGCTTTATACTTACTTTAATTTCCAGGCAATGTCCTTaGTCTTCCCAGCGAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FRHTQRNCQSRGFILTLISRQCP*SSQRKA Trigger: AGCCTTTCGCTGGGAAGATCAAGGACATTGCCTGGA...AATTAAAGTAAGTATAAAGCCCCGTGATTGGCAGTTTCTTTGCGTGTGTCGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR TCA 90 bp | TTCCGACACACGCAAAGAAACTGCCAATCACGGGGCTTTATACTTACTTTAATTCTTTGTTGTGTCCTGTaGTCTCACCCACAGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FRHTQRNCQSRGFILTLILCCVL*SHPQKS Trigger: GCTCTTCTGTGGGTGAGATCACAGGACACAACAAAG...AATTAAAGTAAGTATAAAGCCCCGTGATTGGCAGTTTCTTTGCGTGTGTCGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| CDS-3UTR CCA 90 bp | AACATGACAAATTACAGTAACATCTTCTTGTCCTTAATCTCTGCTCTTGGGGCCGAACTTGAACTTGAATaGAGGGCCCTCGAAGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: NMTNYSNIFLSLISALGAELELE*RALEER Trigger: GCGTTCTTCGAGGGCCCTCCATTCAAGTTCAAGTTC...GGCCCCAAGAGCAGAGATTAAGGACAAGAAGATGTTACTGTAATTTGTCATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR TCA 90 bp | AACATGACAAATTACAGTAACATCTTCTTGTCCTTAATCTCTGCTCTTGGGGCCTCTTCCCATCATAAATaGAAATCTGGCCATCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NMTNYSNIFLSLISALGASSHHK*KSGHQR Trigger: GCGCTGATGGCCAGATTTTCATTTATGATGGGAAGA...GGCCCCAAGAGCAGAGATTAAGGACAAGAAGATGTTACTGTAATTTGTCATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR CAA 90 bp | AGGAGGGTACTCGTAGGCCCTCCCTACTCCCAGAGCAGGCAGGAAGGGGAGCGTGAGTACACACGCACATaGCCATCCGTGCCACCAACA | + |
|
Preference number: 5 (lower is better) Translates to: RRVLVGPPYSQSRQEGEREYTRT*PSVPPT Trigger: TGTTGGTGGCACGGATGGCAATGTGCGTGTGTACTC...ACGCTCCCCTTCCTGCCTGCTCTGGGAGTAGGGAGGGCCTACGAGTACCCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS-3UTR CAA 90 bp | GCGTACAGACACGGACACCCTGAAGAGAGGAGGGTACTCGTAGGCCCTCCCTACCCTCCATCATGGGCCTaGCTTTCTCCAAGGGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: AYRHGHPEERRVLVGPPYPPSWA*LSPRAH Trigger: GTGTGCCCTTGGAGAAAGCAAGGCCCATGATGGAGG...GTAGGGAGGGCCTACGAGTACCCTCCTCTCTTCAGGGTGTCCGTGTCTGTACGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR CAA 90 bp | AGGAGGGTACTCGTAGGCCCTCCCTACTCCCAGAGCAGGCAGGAAGGGGAGCGTCAGTTTCACAACGCCTaGTCCACTGTAGTCCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRVLVGPPYSQSRQEGERQFHNA*STVVPQ Trigger: CTGAGGGACTACAGTGGACAAGGCGTTGTGAAACTG...ACGCTCCCCTTCCTGCCTGCTCTGGGAGTAGGGAGGGCCTACGAGTACCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS-3UTR CAA 90 bp | GACGCGTACAGACACGGACACCCTGAAGAGAGGAGGGTACTCGTAGGCCCTCCCGAGTACACACGCACATaGCCATCCGTGCCACCAACA | + |
|
Preference number: 5 (lower is better) Translates to: DAYRHGHPEERRVLVGPPEYTRT*PSVPPT Trigger: TGTTGGTGGCACGGATGGCAATGTGCGTGTGTACTC...GGGAGGGCCTACGAGTACCCTCCTCTCTTCAGGGTGTCCGTGTCTGTACGCGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS-3UTR CAA 90 bp | AGGAGGGTACTCGTAGGCCCTCCCTACTCCCAGAGCAGGCAGGAAGGGGAGCGTAATACTGTGACCACCTaGCTGGCATCACACACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RRVLVGPPYSQSRQEGERNTVTT*LASHTA Trigger: GGCTGTGTGTGATGCCAGCAAGGTGGTCACAGTATT...ACGCTCCCCTTCCTGCCTGCTCTGGGAGTAGGGAGGGCCTACGAGTACCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS GCA 90 bp | CTTCATCCTTTAGTGTGGAGGCCAGGATGGAGTACACACGCACATTaGCATCCGTGCCACCAACAGCCACTGTGTCCCCACCAGGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LHPLVWRPGWSTHAH*HPCHQQPLCPHQGA Trigger: TGCACCCTGGTGGGGACACAGTGGCTGTTGGTGGCACGGATGGCAATGTGCGTGTGTACTCCATCCTGGCCTCCACACTAAAGGATGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS-3UTR CAA 90 bp | ACTCGTAGGCCCTCCCTACTCCCAGAGCAGGCAGGAAGGGGAGCGTTAGAGAAATCCCTCAGTGTGAGGTaGGTGTACCGCACTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TRRPSLLPEQAGRGALEKSLSVR*VYRTVS Trigger: TGACACAGTGCGGTACACCAACCTCACACTGAGGGA...TTTCTCTAACGCTCCCCTTCCTGCCTGCTCTGGGAGTAGGGAGGGCCTACGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS-3UTR CAA 90 bp | CAGAAGGACGCGTACAGACACGGACACCCTGAAGAGAGGAGGGTACTCGTAGGCTCCCTCAGTGTGAGGTaGGTGTACCGCACTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QKDAYRHGHPEERRVLVGSLSVR*VYRTVS Trigger: TGACACAGTGCGGTACACCAACCTCACACTGAGGGA...GCCTACGAGTACCCTCCTCTCTTCAGGGTGTCCGTGTCTGTACGCGTCCTTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS-3UTR CAA 90 bp | CAAGGTTCACATGTCCCCATGGGATCTGGGGATGGGTCCAGGGAGGCAGCCATGTCTGTTACTGGTCCCTaGGCCTCTAGGAGTTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QGSHVPMGSGDGSREAAMSVTGP*ASRSLP Trigger: AGGCAAACTCCTAGAGGCCAAGGGACCAGTAACAGA...CATGGCTGCCTCCCTGGACCCATCCCCAGATCCCATGGGGACATGTGAACCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR CAA 90 bp | GGCTGCTGCCTCTGGAATGTTCCACGCTCTCATGGTCTGGTGGGCTGTAAGGTTGTCCAGGCAATGTCCTaGATCTTCCCAGCGAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GCCLWNVPRSHGLVGCKVVQAMS*IFPAKG Trigger: GCCTTTCGCTGGGAAGATCAAGGACATTGCCTGGAC...AACCTTACAGCCCACCAGACCATGAGAGCGTGGAACATTCCAGAGGCAGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR CAA 90 bp | GACGCGTACAGACACGGACACCCTGAAGAGAGGAGGGTACTCGTAGGCCCTCCCTCACCAATTGTGAACTaGAACTTGAATGGAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: DAYRHGHPEERRVLVGPPSPIVN*NLNGGP Trigger: GGGCCCTCCATTCAAGTTCAAGTTCACAATTGGTGA...GGGAGGGCCTACGAGTACCCTCCTCTCTTCAGGGTGTCCGTGTCTGTACGCGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR CAA 90 bp | ACTCGTAGGCCCTCCCTACTCCCAGAGCAGGCAGGAAGGGGAGCGTTAGAGAAATCTGTTACTGGTCCCTaGGCCTCTAGGAGTTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TRRPSLLPEQAGRGALEKSVTGP*ASRSLP Trigger: AGGCAAACTCCTAGAGGCCAAGGGACCAGTAACAGA...TTTCTCTAACGCTCCCCTTCCTGCCTGCTCTGGGAGTAGGGAGGGCCTACGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS GCA 90 bp | TGGTCTCTGGGTCACTCAGCGTCCAGACGTACACCATCATATCCATaGCGCCAGAGGCAAAGTGTTCATTATCTGGTGACCAGGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: WSLGHSASRRTPSYP*RQRQSVHYLVTRPG Trigger: GCCTGGCCTGGTCACCAGATAATGAACACTTTGCCTCTGGCGGCATGGATATGATGGTGTACGTCTGGACGCTGAGTGACCCAGAGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS-3UTR CAA 90 bp | ACTCGTAGGCCCTCCCTACTCCCAGAGCAGGCAGGAAGGGGAGCGTTAGAGAAATCCTGGACACCTGATTaGTGTGGCCTTTTCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TRRPSLLPEQAGRGALEKSWTPD*CGLFQR Trigger: TCTCTGGAAAAGGCCACACAAATCAGGTGTCCAGGA...TTTCTCTAACGCTCCCCTTCCTGCCTGCTCTGGGAGTAGGGAGGGCCTACGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS TCA 90 bp | GGTGCACAGCGACGACTTCAGGCTCGTAGCCAGGGTTGTCGATGCTaGAGCACTTCTTCTGGTCCTTCAGAAGGACAATCTGTCCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: GAQRRLQARSQGCRC*STSSGPSEGQSVQC Trigger: GCATTGGACAGATTGTCCTTCTGAAGGACCAGAAGAAGTGCTTCAGCATCGACAACCCTGGCTACGAGCCTGAAGTCGTCGCTGTGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS GCA 90 bp | GAGAGTAGGCCACGTCTGTTACTGGTCCCTTGGCCTCTAGGAGTTTaGCTTCATCCTTTAGTGTGGAGGCCAGGATGGAGTACACACGCA | + |
|
Preference number: 5 (lower is better) Translates to: ESRPRLLLVPWPLGV*LHPLVWRPGWSTHA Trigger: TGCGTGTGTACTCCATCCTGGCCTCCACACTAAAGGATGAAGGCAAACTCCTAGAGGCCAAGGGACCAGTAACAGACGTGGCCTACTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS CCA 90 bp | TTACTGGTCCCTTGGCCTCTAGGAGTTTGCCTTCATCCTTTAGTGTaGAGGCCAGGATGGAGTACACACGCACATTGCCATCCGTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLVPWPLGVCLHPLV*RPGWSTHAHCHPCH Trigger: GTGGCACGGATGGCAATGTGCGTGTGTACTCCATCCTGGCCTCCACACTAAAGGATGAAGGCAAACTCCTAGAGGCCAAGGGACCAGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS CCA 90 bp | GGAAGGCACCATCATGAGAGTAGGCCACGTCTGTTACTGGTCCCTTaGCCTCTAGGAGTTTGCCTTCATCCTTTAGTGTGGAGGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GRHHHESRPRLLLVP*PLGVCLHPLVWRPG Trigger: TCCTGGCCTCCACACTAAAGGATGAAGGCAAACTCCTAGAGGCCAAGGGACCAGTAACAGACGTGGCCTACTCTCATGATGGTGCCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS-3UTR CAA 90 bp | GACGCGTACAGACACGGACACCCTGAAGAGAGGAGGGTACTCGTAGGCCCTCCCCAACAGCTACACACTTaGGTTGAACATCCAGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DAYRHGHPEERRVLVGPPQQLHT*VEHPVS Trigger: TGAAACTGGATGTTCAACCAAAGTGTGTAGCTGTTG...GGGAGGGCCTACGAGTACCCTCCTCTCTTCAGGGTGTCCGTGTCTGTACGCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS-3UTR CAA 90 bp | GCGTACAGACACGGACACCCTGAAGAGAGGAGGGTACTCGTAGGCCCTCCCTACACACTGTTGATGACTTaGTTGTGTCCTGTGATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AYRHGHPEERRVLVGPPYTLLMT*LCPVIS Trigger: TGAGATCACAGGACACAACAAAGTCATCAACAGTGT...GTAGGGAGGGCCTACGAGTACCCTCCTCTCTTCAGGGTGTCCGTGTCTGTACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR CAA 90 bp | CACAGGGGCTTGGGTCTGTGCTTTGGAGGCTGCTGCCTCTGGAATGTTCCACGCCAACAGCTACACACTTaGGTTGAACATCCAGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HRGLGLCFGGCCLWNVPRQQLHT*VEHPVS Trigger: TGAAACTGGATGTTCAACCAAAGTGTGTAGCTGTTG...GCGTGGAACATTCCAGAGGCAGCAGCCTCCAAAGCACAGACCCAAGCCCCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR CAA 90 bp | CCCAGAGCAGGCAGGAAGGGGAGCGTTAGAGAAATAGTTAAGAGAAGGGTGCTCAATACTGTGACCACCTaGCTGGCATCACACACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PRAGRKGSVREIVKRRVLNTVTT*LASHTA Trigger: GGCTGTGTGTGATGCCAGCAAGGTGGTCACAGTATT...GAGCACCCTTCTCTTAACTATTTCTCTAACGCTCCCCTTCCTGCCTGCTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS CCA 90 bp | GCACACGACCACAGTATATCCCCCAGGGCCAACAGCTACACACTTTaGTTGAACATCCAGTTTCACAACGCCTTGTCCACTGTAGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: AHDHSISPRANSYTL*LNIQFHNALSTVVP Trigger: AGGGACTACAGTGGACAAGGCGTTGTGAAACTGGATGTTCAACCAAAGTGTGTAGCTGTTGGCCCTGGGGGATATACTGTGGTCGTGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS TCA 90 bp | CGACCACGGCGATCCTCTTACTGTCTTCCGTCCAGGCAATGTCCTTaGTCTTCCCAGCGAAAGGCTGGTACTCATACTTTAGAAGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: RPRRSSYCLPSRQCP*SSQRKAGTHTLEDA Trigger: AGCATCTTCTAAAGTATGAGTACCAGCCTTTCGCTGGGAAGATCAAGGACATTGCCTGGACGGAAGACAGTAAGAGGATCGCCGTGGTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS CCA 90 bp | CTGTCTTCCGTCCAGGCAATGTCCTTGATCTTCCCAGCGAAAGGCTaGTACTCATACTTTAGAAGATGCTCCTTCTGTGTGGTATCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSSVQAMSLIFPAKG*YSYFRRCSFCVVSQ Trigger: CTGGGATACCACACAGAAGGAGCATCTTCTAAAGTATGAGTACCAGCCTTTCGCTGGGAAGATCAAGGACATTGCCTGGACGGAAGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR CAA 90 bp | CCTACTCCCAGAGCAGGCAGGAAGGGGAGCGTTAGAGAAATAGTTAAGAGAAGGATTGTGAACTTGAACTaGAATGGAGGGCCCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PTPRAGRKGSVREIVKRRIVNLN*NGGPSK Trigger: CTTCGAGGGCCCTCCATTCAAGTTCAAGTTCACAAT...CCTTCTCTTAACTATTTCTCTAACGCTCCCCTTCCTGCCTGCTCTGGGAGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR CAA 90 bp | AGGTACTGTCAGCGTGCCAGGTCAGGAACAAGACAGACAACAGTCAAGATACATGAGAATCGCACACAGTaGACAAAGCGGCTGTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RYCQRARSGTRQTTVKIHENRTQ*TKRLWS Trigger: TGACCACAGCCGCTTTGTCAACTGTGTGCGATTCTC...ATGTATCTTGACTGTTGTCTGTCTTGTTCCTGACCTGGCACGCTGACAGTACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR CAA 90 bp | GGCTGCTGCCTCTGGAATGTTCCACGCTCTCATGGTCTGGTGGGCTGTAAGGTTACCACAGAGTTTACATaGACATCCCAAATCTTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GCCLWNVPRSHGLVGCKVTTEFT*TSQILE Trigger: CTCTAAGATTTGGGATGTCAATGTAAACTCTGTGGT...AACCTTACAGCCCACCAGACCATGAGAGCGTGGAACATTCCAGAGGCAGCAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS CCA 90 bp | TCCTTAGCTTCCCAGAGATGTCTCCAGAAGCAATGTAGAATCCGCTaGGTGCATACTTGGCTACTACCACTTGATGGGCATGTTCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SLASQRCLQKQCRIR*VHTWLLPLDGHVLC Trigger: ACACAGAACATGCCCATCAAGTGGTAGTAGCCAAGTATGCACCCAGCGGATTCTACATTGCTTCTGGAGACATCTCTGGGAAGCTAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR CAA 90 bp | AAAGCGTTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGATTGTTCTCAGCCAACCAGTTTCACAACGCCTaGTCCACTGTAGTCCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KAFKVFSQVQGEGLFSANQFHNA*STVVPQ Trigger: CTGAGGGACTACAGTGGACAAGGCGTTGTGAAACTG...GTTGGCTGAGAACAATCCCTCCCCTTGCACTTGTGAAAACACTTTGAACGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS GCA 90 bp | TCCTTGATCTTCCCAGCGAAAGGCTGGTACTCATACTTTAGAAGATaGTCCTTCTGTGTGGTATCCCAGATCCTTAGCTTCCCAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SLIFPAKGWYSYFRR*SFCVVSQILSFPEM Trigger: CATCTCTGGGAAGCTAAGGATCTGGGATACCACACAGAAGGAGCATCTTCTAAAGTATGAGTACCAGCCTTTCGCTGGGAAGATCAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS CCA 90 bp | CAGCGAAAGGCTGGTACTCATACTTTAGAAGATGCTCCTTCTGTGTaGTATCCCAGATCCTTAGCTTCCCAGAGATGTCTCCAGAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QRKAGTHTLEDAPSV*YPRSLASQRCLQKQ Trigger: TTGCTTCTGGAGACATCTCTGGGAAGCTAAGGATCTGGGATACCACACAGAAGGAGCATCTTCTAAAGTATGAGTACCAGCCTTTCGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR CAA 90 bp | CCTACTCCCAGAGCAGGCAGGAAGGGGAGCGTTAGAGAAATAGTTAAGAGAAGGAGCTACACACTTTGGTaGAACATCCAGTTTCACAAC | + |
|
Preference number: 5 (lower is better) Translates to: PTPRAGRKGSVREIVKRRSYTLW*NIQFHN Trigger: GTTGTGAAACTGGATGTTCAACCAAAGTGTGTAGCT...CCTTCTCTTAACTATTTCTCTAACGCTCCCCTTCCTGCCTGCTCTGGGAGTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS CCA 90 bp | CAGAGATGTCTCCAGAAGCAATGTAGAATCCGCTGGGTGCATACTTaGCTACTACCACTTGATGGGCATGTTCTGTGTAGATATCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QRCLQKQCRIRWVHT*LLPLDGHVLCRYQQ Trigger: TTGCTGATATCTACACAGAACATGCCCATCAAGTGGTAGTAGCCAAGTATGCACCCAGCGGATTCTACATTGCTTCTGGAGACATCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR CAA 90 bp | AACATGACAAATTACAGTAACATCTTCTTGTCCTTAATCTCTGCTCTTGGGGCCTATCATCACTCCCTGTaGCTAGTCGGTAGGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NMTNYSNIFLSLISALGAYHHSL*LVGRAW Trigger: CCAGGCCCTACCGACTAGCAACAGGGAGTGATGATA...GGCCCCAAGAGCAGAGATTAAGGACAAGAAGATGTTACTGTAATTTGTCATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS TCA 90 bp | ATTTGTGTGGCCTTTTCCAGAGAAGGAGTCATTCTCTCCTGTCTCTaGATCCCAGTAATTGATATGTCCATCATGGCTCCCAGAATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ICVAFSREGVILSCL*IPVIDMSIMAPRID Trigger: ATCTATTCTGGGAGCCATGATGGACATATCAATTACTGGGATTCAGAGACAGGAGAGAATGACTCCTTCTCTGGAAAAGGCCACACAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS-3UTR CAA 90 bp | AAAGCGTTCAAAGTGTTTTCACAAGTGCAAGGGGAGGGATTGTTCTCAGCCAACTTTATGTCCACACTGTaGATGACTTTGTTGTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KAFKVFSQVQGEGLFSANFMSTL*MTLLCP Trigger: AGGACACAACAAAGTCATCAACAGTGTGGACATAAA...GTTGGCTGAGAACAATCCCTCCCCTTGCACTTGTGAAAACACTTTGAACGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS-3UTR CAA 90 bp | TTCCGACACACGCAAAGAAACTGCCAATCACGGGGCTTTATACTTACTTTAATTCAAATCTTAGAGGTTTaGTCTCCAGAGGCAGATAGC | + |
|
Preference number: 5 (lower is better) Translates to: FRHTQRNCQSRGFILTLIQILEV*SPEADS Trigger: GCTATCTGCCTCTGGAGACAAAACCTCTAAGATTTG...AATTAAAGTAAGTATAAAGCCCCGTGATTGGCAGTTTCTTTGCGTGTGTCGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS GCA 72 bp | AGGCCAGGATGGAGTACACACGCACATTGCCATCCGTaGCACCAACAGCCACTGTGTCCCCACCAGGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RPGWSTHAHCHP*HQQPLCPHQGA Trigger: TGCACCCTGGTGGGGACACAGTGGCTGTTGGTGGCACGGATGGCAATGTGCGTGTGTACTCCATCCTGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS CCA 72 bp | TCTCCACCGAGGATCTTAGAGACGCCCCGCTCCACCTaGGGGAGGCTGGCGAACACCTTCTTGATCTCGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SPPRILETPRST*GRLANTFLISY Trigger: GTACGAGATCAAGAAGGTGTTCGCCAGCCTCCCCCAGGTGGAGCGGGGCGTCTCTAAGATCCTCGGTGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS CAA 90 bp | CCTTCATCCTTTAGTGTGGAGGCCAGGATGGAGTACACACGCACATaGCCATCCGTGCCACCAACAGCCACTGTGTCCCCACCAGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PSSFSVEARMEYTRT*PSVPPTATVSPPGC Trigger: GCACCCTGGTGGGGACACAGTGGCTGTTGGTGGCACGGATGGCAATGTGCGTGTGTACTCCATCCTGGCCTCCACACTAAAGGATGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS GCA 72 bp | TTAGTGTGGAGGCCAGGATGGAGTACACACGCACATTaGCATCCGTGCCACCAACAGCCACTGTGTCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LVWRPGWSTHAH*HPCHQQPLCPH Trigger: GTGGGGACACAGTGGCTGTTGGTGGCACGGATGGCAATGTGCGTGTGTACTCCATCCTGGCCTCCACACTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS CAA 72 bp | TTTAGTGTGGAGGCCAGGATGGAGTACACACGCACATaGCCATCCGTGCCACCAACAGCCACTGTGTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: FSVEARMEYTRT*PSVPPTATVSP Trigger: TGGGGACACAGTGGCTGTTGGTGGCACGGATGGCAATGTGCGTGTGTACTCCATCCTGGCCTCCACACTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS CAA 90 bp | AGGTGGTCCTTCTGCCAGAGGCAGCCCAGCTGCTGGTCCAGAACATaGGAGCCCATGGGAAACGTGCTGACCACAGAGTTTACATTGACA | + |
|
Preference number: 6 (lower is better) Translates to: RWSFCQRQPSCWSRT*EPMGNVLTTEFTLT Trigger: TGTCAATGTAAACTCTGTGGTCAGCACGTTTCCCATGGGCTCCAATGTTCTGGACCAGCAGCTGGGCTGCCTCTGGCAGAAGGACCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS TCA 72 bp | GTTTCACAACGCCTTGTCCACTGTAGTCCCTCAGTGTaGGGTTGGTGTACCGCACTGTGTCATCCATGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VSQRLVHCSPSV*GWCTALCHPCC Trigger: GCAGCATGGATGACACAGTGCGGTACACCAACCTCACACTGAGGGACTACAGTGGACAAGGCGTTGTGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS CCA 72 bp | GGAGTTTGCCTTCATCCTTTAGTGTGGAGGCCAGGATaGAGTACACACGCACATTGCCATCCGTGCCACCAA | + |
|
Preference number: 6 (lower is better) Translates to: GVCLHPLVWRPG*STHAHCHPCHQ Trigger: TTGGTGGCACGGATGGCAATGTGCGTGTGTACTCCATCCTGGCCTCCACACTAAAGGATGAAGGCAAACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS TCA 72 bp | CGACGACTTCAGGCTCGTAGCCAGGGTTGTCGATGCTaGAGCACTTCTTCTGGTCCTTCAGAAGGACAATCT | + |
|
Preference number: 6 (lower is better) Translates to: RRLQARSQGCRC*STSSGPSEGQS Trigger: AGATTGTCCTTCTGAAGGACCAGAAGAAGTGCTTCAGCATCGACAACCCTGGCTACGAGCCTGAAGTCGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS CAA 72 bp | CCTCGAAGAACGCAGCACAGTTATCATCACTCCCTGTaGCTAGTCGGTAGGGCCTGGTCTGCTTTATGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PRRTQHSYHHSL*LVGRAWSALCP Trigger: TGGACATAAAGCAGACCAGGCCCTACCGACTAGCAACAGGGAGTGATGATAACTGTGCTGCGTTCTTCGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS CAA 90 bp | CCGACCACGGCGATCCTCTTACTGTCTTCCGTCCAGGCAATGTCCTaGATCTTCCCAGCGAAAGGCTGGTACTCATACTTTAGAAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: PTTAILLLSSVQAMS*IFPAKGWYSYFRRC Trigger: GCATCTTCTAAAGTATGAGTACCAGCCTTTCGCTGGGAAGATCAAGGACATTGCCTGGACGGAAGACAGTAAGAGGATCGCCGTGGTCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS CAA 90 bp | CACGACCACAGTATATCCCCCAGGGCCAACAGCTACACACTTTGGTaGAACATCCAGTTTCACAACGCCTTGTCCACTGTAGTCCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: HDHSISPRANSYTLW*NIQFHNALSTVVPQ Trigger: CTGAGGGACTACAGTGGACAAGGCGTTGTGAAACTGGATGTTCAACCAAAGTGTGTAGCTGTTGGCCCTGGGGGATATACTGTGGTCGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS CAA 90 bp | TGCACACGACCACAGTATATCCCCCAGGGCCAACAGCTACACACTTaGGTTGAACATCCAGTTTCACAACGCCTTGTCCACTGTAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: CTRPQYIPQGQQLHT*VEHPVSQRLVHCSP Trigger: GGGACTACAGTGGACAAGGCGTTGTGAAACTGGATGTTCAACCAAAGTGTGTAGCTGTTGGCCCTGGGGGATATACTGTGGTCGTGTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS TCA 72 bp | ATCCATGCCGCCAGAGGCAAAGTGTTCATTATCTGGTaGCCAGGCCAGGCACACAATTTTTGCATGGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: IHAARGKVFIIW*PGQAHNFCMVS Trigger: GGACACCATGCAAAAATTGTGTGCCTGGCCTGGTCACCAGATAATGAACACTTTGCCTCTGGCGGCATGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS GCA 72 bp | ACTTCTTCTGGTCCTTCAGAAGGACAATCTGTCCAATaGACACGACCACAGTATATCCCCCAGGGCCAACAG | + |
|
Preference number: 6 (lower is better) Translates to: TSSGPSEGQSVQ*TRPQYIPQGQQ Trigger: CTGTTGGCCCTGGGGGATATACTGTGGTCGTGTGCATTGGACAGATTGTCCTTCTGAAGGACCAGAAGAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS CCA 72 bp | CATCATGAGAGTAGGCCACGTCTGTTACTGGTCCCTTaGCCTCTAGGAGTTTGCCTTCATCCTTTAGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: HHESRPRLLLVP*PLGVCLHPLVW Trigger: CCACACTAAAGGATGAAGGCAAACTCCTAGAGGCCAAGGGACCAGTAACAGACGTGGCCTACTCTCATGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS CAA 72 bp | CAGTTGACAAAGCGGCTGTGGTCACCAATTGTGAACTaGAACTTGAATGGAGGGCCCTCGAAGAACGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QLTKRLWSPIVN*NLNGGPSKNAA Trigger: TGCTGCGTTCTTCGAGGGCCCTCCATTCAAGTTCAAGTTCACAATTGGTGACCACAGCCGCTTTGTCAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS CAA 72 bp | CCACAGTATATCCCCCAGGGCCAACAGCTACACACTTaGGTTGAACATCCAGTTTCACAACGCCTTGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PQYIPQGQQLHT*VEHPVSQRLVH Trigger: GTGGACAAGGCGTTGTGAAACTGGATGTTCAACCAAAGTGTGTAGCTGTTGGCCCTGGGGGATATACTGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS GCA 72 bp | TATGTCCATCATGGCTCCCAGAATAGATGTAGGACTTaGCACCATTTCTGTGCACGGTCAGACACTGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: YVHHGSQNRCRT*HHFCARSDTGW Trigger: CCATCCAGTGTCTGACCGTGCACAGAAATGGTGGCAAGTCCTACATCTATTCTGGGAGCCATGATGGACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS CCA 72 bp | TCCCAGAGATGTCTCCAGAAGCAATGTAGAATCCGCTaGGTGCATACTTGGCTACTACCACTTGATGGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SQRCLQKQCRIR*VHTWLLPLDGH Trigger: ATGCCCATCAAGTGGTAGTAGCCAAGTATGCACCCAGCGGATTCTACATTGCTTCTGGAGACATCTCTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
||
| CDS CCA 72 bp | CACAGTATATCCCCCAGGGCCAACAGCTACACACTTTaGTTGAACATCCAGTTTCACAACGCCTTGTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: HSISPRANSYTL*LNIQFHNALST Trigger: AGTGGACAAGGCGTTGTGAAACTGGATGTTCAACCAAAGTGTGTAGCTGTTGGCCCTGGGGGATATACTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
||
| CDS CAA 72 bp | GCGATCCTCTTACTGTCTTCCGTCCAGGCAATGTCCTaGATCTTCCCAGCGAAAGGCTGGTACTCATACTTT | + |
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Preference number: 6 (lower is better) Translates to: AILLLSSVQAMS*IFPAKGWYSYF Trigger: AAAGTATGAGTACCAGCCTTTCGCTGGGAAGATCAAGGACATTGCCTGGACGGAAGACAGTAAGAGGATCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| CDS CAA 72 bp | GGCCTGGTCTGCTTTATGTCCACACTGTTGATGACTTaGTTGTGTCCTGTGATCTCACCCACAGAAGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: GLVCFMSTLLMT*LCPVISPTEEP Trigger: TGGCTCTTCTGTGGGTGAGATCACAGGACACAACAAAGTCATCAACAGTGTGGACATAAAGCAGACCAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| CDS TCA 72 bp | CGATCCTCTTACTGTCTTCCGTCCAGGCAATGTCCTTaGTCTTCCCAGCGAAAGGCTGGTACTCATACTTTA | + |
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Preference number: 6 (lower is better) Translates to: RSSYCLPSRQCP*SSQRKAGTHTL Trigger: TAAAGTATGAGTACCAGCCTTTCGCTGGGAAGATCAAGGACATTGCCTGGACGGAAGACAGTAAGAGGATCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| CDS GCA 72 bp | AGAGATGTCTCCAGAAGCAATGTAGAATCCGCTGGGTaGATACTTGGCTACTACCACTTGATGGGCATGTTC | + |
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Preference number: 6 (lower is better) Translates to: RDVSRSNVESAG*ILGYYHLMGMF Trigger: GAACATGCCCATCAAGTGGTAGTAGCCAAGTATGCACCCAGCGGATTCTACATTGCTTCTGGAGACATCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| CDS CCA 72 bp | CTCCAGAAGCAATGTAGAATCCGCTGGGTGCATACTTaGCTACTACCACTTGATGGGCATGTTCTGTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: LQKQCRIRWVHT*LLPLDGHVLCR Trigger: TCTACACAGAACATGCCCATCAAGTGGTAGTAGCCAAGTATGCACCCAGCGGATTCTACATTGCTTCTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| CDS CAA 72 bp | CTGGTCTGCTTTATGTCCACACTGTTGATGACTTTGTaGTGTCCTGTGATCTCACCCACAGAAGAGCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: LVCFMSTLLMTL*CPVISPTEEPV Trigger: CACTGGCTCTTCTGTGGGTGAGATCACAGGACACAACAAAGTCATCAACAGTGTGGACATAAAGCAGACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| CDS CAA 72 bp | GCAAATCTGTTCCCATCAGGAGAGAATCGCACACAGTaGACAAAGCGGCTGTGGTCACCAATTGTGAACTTG | + |
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Preference number: 6 (lower is better) Translates to: ANLFPSGENRTQ*TKRLWSPIVNL Trigger: CAAGTTCACAATTGGTGACCACAGCCGCTTTGTCAACTGTGTGCGATTCTCTCCTGATGGGAACAGATTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| CDS CAA 72 bp | AGTATATCCCCCAGGGCCAACAGCTACACACTTTGGTaGAACATCCAGTTTCACAACGCCTTGTCCACTGTA | + |
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Preference number: 6 (lower is better) Translates to: SISPRANSYTLW*NIQFHNALSTV Trigger: TACAGTGGACAAGGCGTTGTGAAACTGGATGTTCAACCAAAGTGTGTAGCTGTTGGCCCTGGGGGATATACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
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| CDS CAA 90 bp | CTAGCTGTGGCAAATCTGTTCCCATCAGGAGAGAATCGCACACAGTaGACAAAGCGGCTGTGGTCACCAATTGTGAACTTGAACTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: LAVANLFPSGENRTQ*TKRLWSPIVNLNLN Trigger: ATTCAAGTTCAAGTTCACAATTGGTGACCACAGCCGCTTTGTCAACTGTGTGCGATTCTCTCCTGATGGGAACAGATTTGCCACAGCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| CDS CAA 90 bp | AGAACATTGGAGCCCATGGGAAACGTGCTGACCACAGAGTTTACATaGACATCCCAAATCTTAGAGGTTTTGTCTCCAGAGGCAGATAGC | + |
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Preference number: 6 (lower is better) Translates to: RTLEPMGNVLTTEFT*TSQILEVLSPEADS Trigger: GCTATCTGCCTCTGGAGACAAAACCTCTAAGATTTGGGATGTCAATGTAAACTCTGTGGTCAGCACGTTTCCCATGGGCTCCAATGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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| CDS CAA 72 bp | TACACACTTTGGTTGAACATCCAGTTTCACAACGCCTaGTCCACTGTAGTCCCTCAGTGTGAGGTTGGTGTA | + |
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Preference number: 6 (lower is better) Translates to: YTLWLNIQFHNA*STVVPQCEVGV Trigger: TACACCAACCTCACACTGAGGGACTACAGTGGACAAGGCGTTGTGAAACTGGATGTTCAACCAAAGTGTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005234.13 ENSMUST00000201260.4 |
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| CDS CAA 90 bp | AGAAGCAATGTAGAATCCGCTGGGTGCATACTTGGCTACTACCACTaGATGGGCATGTTCTGTGTAGATATCAGCAATAGCAGGGTTATC | + |
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Preference number: 6 (lower is better) Translates to: RSNVESAGCILGYYH*MGMFCVDISNSRVI Trigger: GATAACCCTGCTATTGCTGATATCTACACAGAACATGCCCATCAAGTGGTAGTAGCCAAGTATGCACCCAGCGGATTCTACATTGCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005234.13 |
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