Pregenerated sensors for WDPCP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020319Ensembl transcript IDs: ENSMUST00000020568.10, ENSMUST00000131135.3
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTTTATTATATATGTATAAGTGTTTTGCTCACACCACATGTCTGTaGTTGGTGCCTGAGGAGGTCAGAAGAGGGCACTGGCTCCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: VLLYMYKCFAHTTCL*LVPEEVRRGHWLPW Trigger: CCAAGGGAGCCAGTGCCCTCTTCTGACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTATACATATATAATAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| 3UTR CCA 90 bp | TATTATATATGTATAAGTGTTTTGCTCACACCACATGTCTGTGCTTaGTGCCTGAGGAGGTCAGAAGAGGGCACTGGCTCCCTTGGATCT | + |
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Preference number: 1 (lower is better) Translates to: YYICISVLLTPHVCA*CLRRSEEGTGSLGS Trigger: AGATCCAAGGGAGCCAGTGCCCTCTTCTGACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTATACATATATAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| 3UTR-3UTR TCA 90 bp | ATAAGTGTTTTGCTCACACCACATGTCTGTGCTTGGTGCCTGAGGAGGTCAGAAGTGGGTGGTGGGAATTaGACCTGGGTCCTCTGTAAG | + |
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Preference number: 2 (lower is better) Translates to: ISVLLTPHVCAWCLRRSEVGGGN*TWVLCK Trigger: CTTACAGAGGACCCAGGTTCAATTCCCACCACCCAC...TTCTGACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| 3UTR CAA 90 bp | TTATTATATATGTATAAGTGTTTTGCTCACACCACATGTCTGTGCTaGGTGCCTGAGGAGGTCAGAAGAGGGCACTGGCTCCCTTGGATC | + |
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Preference number: 2 (lower is better) Translates to: LLYMYKCFAHTTCLC*VPEEVRRGHWLPWI Trigger: GATCCAAGGGAGCCAGTGCCCTCTTCTGACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTATACATATATAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| 3UTR-3UTR TCA 90 bp | GGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAAGCTTTCGGAACTTTTATTaGGGGTCACTTATGCAATGC | + |
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Preference number: 2 (lower is better) Translates to: GQKRALAPLDLELRTVISFRNFY*GSLMQC Trigger: GCATTGCATAAGTGACCCTCAATAAAAGTTCCGAAA...GCTTATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| 3UTR TCA 72 bp | GTGTTTTGCTCACACCACATGTCTGTGCTTGGTGCCTaGGGAGGTCAGAAGAGGGCACTGGCTCCCTTGGAT | + |
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Preference number: 3 (lower is better) Translates to: VFCSHHMSVLGA*GGQKRALAPLD Trigger: ATCCAAGGGAGCCAGTGCCCTCTTCTGACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| 3UTR GCA 72 bp | ATAAGTGTTTTGCTCACACCACATGTCTGTGCTTGGTaGCTGAGGAGGTCAGAAGAGGGCACTGGCTCCCTT | + |
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Preference number: 3 (lower is better) Translates to: ISVLLTPHVCAW*LRRSEEGTGSL Trigger: AAGGGAGCCAGTGCCCTCTTCTGACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| 3UTR CCA 72 bp | TGTATAAGTGTTTTGCTCACACCACATGTCTGTGCTTaGTGCCTGAGGAGGTCAGAAGAGGGCACTGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: CISVLLTPHVCA*CLRRSEEGTGS Trigger: GGAGCCAGTGCCCTCTTCTGACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTATACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| 3UTR GCA 72 bp | TATATGTATAAGTGTTTTGCTCACACCACATGTCTGTaGTTGGTGCCTGAGGAGGTCAGAAGAGGGCACTGG | + |
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Preference number: 3 (lower is better) Translates to: YMYKCFAHTTCL*LVPEEVRRGHW Trigger: CCAGTGCCCTCTTCTGACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTATACATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CCA 90 bp | CTGTGCTTGGTGCCTGAGGAGGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGTACCTGAGCAGGTGGTaGAAGAGCCTCCTGGCATAC | + |
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Preference number: 4 (lower is better) Translates to: LCLVPEEVRRGHWLPWIWYLSRW*KSLLAY Trigger: GTATGCCAGGAGGCTCTTCCACCACCTGCTCAGGTA...CCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACCTCCTCAGGCACCAAGCACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR TCA 90 bp | CTGTGCTTGGTGCCTGAGGAGGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGCGGAGCACTCCACTGTaGACACCTGATAAGGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: LCLVPEEVRRGHWLPWIWRSTPL*TPDKVV Trigger: AACAACCTTATCAGGTGTTCACAGTGGAGTGCTCCG...CCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACCTCCTCAGGCACCAAGCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR GCA 90 bp | CTGTGCTTGGTGCCTGAGGAGGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGCCGCAATGTGTAAGGTaGTTTTCAGAGACCACAGGT | + |
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Preference number: 4 (lower is better) Translates to: LCLVPEEVRRGHWLPWIWPQCVR*FSETTG Trigger: ACCTGTGGTCTCTGAAAAGCACCTTACACATTGCGG...CCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACCTCCTCAGGCACCAAGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CCA 90 bp | CTGTGCTTGGTGCCTGAGGAGGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGATTTGTAGCTCCCCTTaGTTGCTGCCAACCAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: LCLVPEEVRRGHWLPWIWICSSP*LLPTRR Trigger: TCTTCTGGTTGGCAGCAACCAAGGGGAGCTACAAAT...CCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACCTCCTCAGGCACCAAGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CCA 90 bp | GGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAAGCCCGATCAAACACTGCTaGCCCAGGGTGTCCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: GQKRALAPLDLELRTVISPIKHC*PRVSQS Trigger: GGACTGGGACACCCTGGGCCAGCAGTGTTTGATCGG...GCTTATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR GCA 90 bp | CTGTGCTTGGTGCCTGAGGAGGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGGCTGGCAGATGTATTTaGTCTTCCATTTGCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LCLVPEEVRRGHWLPWIWAGRCI*SSICSA Trigger: TGCTGAGCAAATGGAAGAGCAAATACATCTGCCAGC...CCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACCTCCTCAGGCACCAAGCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CCA 90 bp | GGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAAGCCTGCATTCCAGGTGGTaGCCCCTGAAGAGTCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: GQKRALAPLDLELRTVISLHSRW*PLKSQC Trigger: GCACTGACTCTTCAGGGGCCACCACCTGGAATGCAG...GCTTATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR TCA 90 bp | AGGAGGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATTGCTGCGCAGGATGCTaGTGGCCTCATATACCTCAC | + |
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Preference number: 4 (lower is better) Translates to: RRSEEGTGSLGSGIKDSHCCAGC*WPHIPH Trigger: GTGAGGTATATGAGGCCATCAGCATCCTGCGCAGCA...ATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR GCA 90 bp | AGGAGGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATGCTCGCCTCAAGCTGTaGTTCTCTCTCTGGTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: RRSEEGTGSLGSGIKDSHARLKL*FSLWCE Trigger: CTCACACCAGAGAGAGAAGCACAGCTTGAGGCGAGC...ATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CCA 90 bp | AGGAGGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATTTGTACCTGAGCAGGTaGTGGAAGAGCCTCCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: RRSEEGTGSLGSGIKDSHLYLSR*WKSLLA Trigger: TGCCAGGAGGCTCTTCCACCACCTGCTCAGGTACAA...ATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CCA 90 bp | GGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAAGCCTTCTGCATTCCAGGTaGTGGCCCCTGAAGAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: GQKRALAPLDLELRTVISLLHSR*WPLKSQ Trigger: CTGACTCTTCAGGGGCCACCACCTGGAATGCAGAAG...GCTTATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR TCA 90 bp | ATAAGTGTTTTGCTCACACCACATGTCTGTGCTTGGTGCCTGAGGAGGTCAGAAGGACACCAGCACACCTaGACCAAACAGGAGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: ISVLLTPHVCAWCLRRSEGHQHT*TKQELA Trigger: TGCCAGCTCCTGTTTGGTTCAGGTGTGCTGGTGTCC...TTCTGACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR GCA 90 bp | ATAAGTGTTTTGCTCACACCACATGTCTGTGCTTGGTGCCTGAGGAGGTCAGAAGCTCCCCTTGGTTGCTaGCAACCAGAAGAATGGCGC | + |
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Preference number: 4 (lower is better) Translates to: ISVLLTPHVCAWCLRRSEAPLGC*QPEEWR Trigger: GCGCCATTCTTCTGGTTGGCAGCAACCAAGGGGAGC...TTCTGACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR GCA 90 bp | GGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAAGCGTAGCTCCCCTTGGTTaGTGCCAACCAGAAGAATGG | + |
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Preference number: 4 (lower is better) Translates to: GQKRALAPLDLELRTVISVAPLG*CQPEEW Trigger: CCATTCTTCTGGTTGGCAGCAACCAAGGGGAGCTAC...GCTTATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CCA 90 bp | ATGTATAAGTGTTTTGCTCACACCACATGTCTGTGCTTGGTGCCTGAGGAGGTCTGCCAACCAGAAGAATaGCGCCACTTGGGTGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: MYKCFAHTTCLCLVPEEVCQPEE*RHLGGS Trigger: GCTGCCACCCAAGTGGCGCCATTCTTCTGGTTGGCA...GACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTATACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR GCA 90 bp | AGGAGGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATCCCCTGAAGAGTCAGTaGATAACTCCTCCTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: RRSEEGTGSLGSGIKDSHPLKSQ*ITPPLP Trigger: AGGAAGAGGAGGAGTTATGCACTGACTCTTCAGGGG...ATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| 3UTR CAA 72 bp | ATGTATAAGTGTTTTGCTCACACCACATGTCTGTGCTaGGTGCCTGAGGAGGTCAGAAGAGGGCACTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: MYKCFAHTTCLC*VPEEVRRGHWL Trigger: GAGCCAGTGCCCTCTTCTGACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTATACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR TCA 90 bp | GGATCTGGAATTAAGGACAGTCATAAGCCACCATGTGGGTGGTGGGAATTGAACATCACTGATGGTGTCTaGGATGAGCTTCCCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: GSGIKDSHKPPCGWWELNITDGV*DELPHQ Trigger: CTGGTGGGGAAGCTCATCTCAGACACCATCAGTGAT...GTTCAATTCCCACCACCCACATGGTGGCTTATGACTGTCCTTAATTCCAGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR TCA 90 bp | ATGTATAAGTGTTTTGCTCACACCACATGTCTGTGCTTGGTGCCTGAGGAGGTCACCTCCAATCCTCCTTaGGTAAAGCCCAGCAACAGC | + |
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Preference number: 4 (lower is better) Translates to: MYKCFAHTTCLCLVPEEVTSNPP*VKPSNS Trigger: GCTGTTGCTGGGCTTTACTCAAGGAGGATTGGAGGT...GACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTATACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR TCA 90 bp | ATGTATAAGTGTTTTGCTCACACCACATGTCTGTGCTTGGTGCCTGAGGAGGTCAGTTCCTGCAGCAGCTaGTGGCCTTCGATCTTAGTG | + |
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Preference number: 4 (lower is better) Translates to: MYKCFAHTTCLCLVPEEVSSCSS*WPSILV Trigger: CACTAAGATCGAAGGCCATCAGCTGCTGCAGGAACT...GACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTATACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR TCA 90 bp | ATGTATAAGTGTTTTGCTCACACCACATGTCTGTGCTTGGTGCCTGAGGAGGTCCAAATCTCTTGTACCTaGGCAGGTGGTGGAAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: MYKCFAHTTCLCLVPEEVQISCT*AGGGRA Trigger: GGCTCTTCCACCACCTGCTCAGGTACAAGAGATTTG...GACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTATACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR TCA 90 bp | GGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAAGCTTCAGGCATGAGAGCTaGGCTGGCAAAACCTTCATT | + |
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Preference number: 4 (lower is better) Translates to: GQKRALAPLDLELRTVISFRHES*AGKTFI Trigger: AATGAAGGTTTTGCCAGCTCAGCTCTCATGCCTGAA...GCTTATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CCA 90 bp | GGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAAGCCCTCTTTTAGGCTTCTaGAAAACAACAGGAGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: GQKRALAPLDLELRTVISPLLGF*KTTGGA Trigger: GGCTCCTCCTGTTGTTTTCCAGAAGCCTAAAAGAGG...GCTTATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR TCA 90 bp | GGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAAGCCTGGGCGTCTATTTTTaGGTGTCCAAGGATAATCTC | + |
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Preference number: 4 (lower is better) Translates to: GQKRALAPLDLELRTVISLGVYF*VSKDNL Trigger: GAGATTATCCTTGGACACTCAAAAATAGACGCCCAG...GCTTATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR TCA 90 bp | GGATCTGGAATTAAGGACAGTCATAAGCCACCATGTGGGTGGTGGGAATTGAACGTGGCAGCTTATCAATaGAGGCCTAAGTTCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: GSGIKDSHKPPCGWWELNVAAYQ*RPKFSL Trigger: CAGGCTGAACTTAGGCCTTCATTGATAAGCTGCCAC...GTTCAATTCCCACCACCCACATGGTGGCTTATGACTGTCCTTAATTCCAGATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR TCA 90 bp | ATGTATAAGTGTTTTGCTCACACCACATGTCTGTGCTTGGTGCCTGAGGAGGTCTTTCTCCTTCAGGCATaGGAGCTGAGCTGGCAAAAC | + |
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Preference number: 4 (lower is better) Translates to: MYKCFAHTTCLCLVPEEVFLLQA*ELSWQN Trigger: GTTTTGCCAGCTCAGCTCTCATGCCTGAAGGAGAAA...GACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTATACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR GCA 90 bp | ATGTATAAGTGTTTTGCTCACACCACATGTCTGTGCTTGGTGCCTGAGGAGGTCACACACGGACTGCTTTaGATCAGTTCCTCCAACTCC | + |
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Preference number: 4 (lower is better) Translates to: MYKCFAHTTCLCLVPEEVTHGLL*ISSSNS Trigger: GGAGTTGGAGGAACTGATGCAAAGCAGTCCGTGTGT...GACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTATACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR GCA 90 bp | ATAAGTGTTTTGCTCACACCACATGTCTGTGCTTGGTGCCTGAGGAGGTCAGAATCAGCACACACGGACTaGTTTGCATCAGTTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ISVLLTPHVCAWCLRRSESAHTD*FASVPP Trigger: TGGAGGAACTGATGCAAAGCAGTCCGTGTGTGCTGA...TTCTGACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR GCA 90 bp | AGGAGGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATGGGGACTCCATTCTGTaGGAACAAAACTTAGAACCT | + |
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Preference number: 4 (lower is better) Translates to: RRSEEGTGSLGSGIKDSHGDSIL*EQNLEP Trigger: AGGTTCTAAGTTTTGTTCGCACAGAATGGAGTCCCC...ATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CCA 90 bp | GGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAAGCGAACCAAACAGGAGCTaGCAGATGTATTTGCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GQKRALAPLDLELRTVISEPNRS*QMYLLF Trigger: GAAGAGCAAATACATCTGCCAGCTCCTGTTTGGTTC...GCTTATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CCA 90 bp | GGATCTGGAATTAAGGACAGTCATAAGCCACCATGTGGGTGGTGGGAATTGAACCTGTGCTTCTCTCTCTaGTGTGAGCCTCTGTCTAAG | + |
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Preference number: 4 (lower is better) Translates to: GSGIKDSHKPPCGWWELNLCFSL*CEPLSK Trigger: CTTAGACAGAGGCTCACACCAGAGAGAGAAGCACAG...GTTCAATTCCCACCACCCACATGGTGGCTTATGACTGTCCTTAATTCCAGATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CCA 90 bp | AGGAGGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATCAGAAGTGGTCTTGTTaGAGCATAGAAGGTTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: RRSEEGTGSLGSGIKDSHQKWSC*SIEGSK Trigger: CTTGGAACCTTCTATGCTCCAACAAGACCACTTCTG...ATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR TCA 90 bp | GGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAAGCTTCATAGAGAATTACTaGAGAGTCTTCACAGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: GQKRALAPLDLELRTVISFIENY*RVFTAH Trigger: GTGGGCTGTGAAGACTCTTCAGTAATTCTCTATGAA...GCTTATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR TCA 90 bp | AGGAGGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATCATCAAAGAACTTCTTaGATTGCAGAGTCTCCTTCG | + |
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Preference number: 4 (lower is better) Translates to: RRSEEGTGSLGSGIKDSHHQRTS*IAESPS Trigger: CGAAGGAGACTCTGCAATTCAAGAAGTTCTTTGATG...ATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR TCA 90 bp | GGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAAGCTACACCAAACCAAAGTaGACCATTCTGAGAGAACCA | + |
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Preference number: 4 (lower is better) Translates to: GQKRALAPLDLELRTVISYTKPK*TILREP Trigger: TGGTTCTCTCAGAATGGTTCACTTTGGTTTGGTGTA...GCTTATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR GCA 90 bp | ATGTATAAGTGTTTTGCTCACACCACATGTCTGTGCTTGGTGCCTGAGGAGGTCATTTGCTCTTCCATTTaGTCAGCACACACGGACTGC | + |
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Preference number: 4 (lower is better) Translates to: MYKCFAHTTCLCLVPEEVICSSI*SAHTDC Trigger: GCAGTCCGTGTGTGCTGAGCAAATGGAAGAGCAAAT...GACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTATACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR GCA 90 bp | GGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAAGCTCAACATCAATATCATaGGCCCTTCTTCTTGCCACT | + |
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Preference number: 4 (lower is better) Translates to: GQKRALAPLDLELRTVISSTSIS*ALLLAT Trigger: AGTGGCAAGAAGAAGGGCGCATGATATTGATGTTGA...GCTTATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CCA 90 bp | ATGTATAAGTGTTTTGCTCACACCACATGTCTGTGCTTGGTGCCTGAGGAGGTCCTCTGTCTAAGAAGATaGTTCACGATGGTGCCCATG | + |
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Preference number: 4 (lower is better) Translates to: MYKCFAHTTCLCLVPEEVLCLRR*FTMVPM Trigger: CATGGGCACCATCGTGAACCATCTTCTTAGACAGAG...GACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTATACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR TCA 90 bp | GGATCTGGAATTAAGGACAGTCATAAGCCACCATGTGGGTGGTGGGAATTGAACCCAAGGATAATCTCGTaGTTCTGCCAGCCTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSGIKDSHKPPCGWWELNPRIIS*FCQPLF Trigger: AAACAAAGGCTGGCAGAATCACGAGATTATCCTTGG...GTTCAATTCCCACCACCCACATGGTGGCTTATGACTGTCCTTAATTCCAGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR TCA 90 bp | GGATCTGGAATTAAGGACAGTCATAAGCCACCATGTGGGTGGTGGGAATTGAACCTCCAACTCCTTCAGTaGATCTCGAAGTTTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSGIKDSHKPPCGWWELNLQLLQ*ISKFFW Trigger: CCAGAAAAACTTCGAGATTCACTGAAGGAGTTGGAG...GTTCAATTCCCACCACCCACATGGTGGCTTATGACTGTCCTTAATTCCAGATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR GCA 90 bp | GGATCTGGAATTAAGGACAGTCATAAGCCACCATGTGGGTGGTGGGAATTGAACTCTCAATTGCCCATCTaGTTGAAGGGCCATTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSGIKDSHKPPCGWWELNSQLPI*LKGHLV Trigger: TACCAAATGGCCCTTCAAGCAGATGGGCAATTGAGA...GTTCAATTCCCACCACCCACATGGTGGCTTATGACTGTCCTTAATTCCAGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CCA 90 bp | AGGAGGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAGTTGTATCCAGAAGTaGTCTTGTTGGAGCATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRSEEGTGSLGSGIKDSHSCIQK*SCWSIE Trigger: TTCTATGCTCCAACAAGACCACTTCTGGATACAACT...ATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CCA 90 bp | GGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAAGCATGTCCTGTTTCCTTTaGTCTTCTTTCAGTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GQKRALAPLDLELRTVISMSCFL*SSFSSP Trigger: AGGAGAACTGAAAGAAGACCAAAGGAAACAGGACAT...GCTTATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR TCA 90 bp | ATAAGTGTTTTGCTCACACCACATGTCTGTGCTTGGTGCCTGAGGAGGTCAGAAGACTCCAGAGGATACTaGCTCAACATCAATATCATG | + |
|
Preference number: 4 (lower is better) Translates to: ISVLLTPHVCAWCLRRSEDSRGY*LNINIM Trigger: CATGATATTGATGTTGAGTCAGTATCCTCTGGAGTC...TTCTGACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR TCA 90 bp | GGATCTGGAATTAAGGACAGTCATAAGCCACCATGTGGGTGGTGGGAATTGAACAGTTTGCATGTGTGTTaGACCAATGGAAGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSGIKDSHKPPCGWWELNSLHVC*TNGRKK Trigger: CTTCTTCCTTCCATTGGTTCAACACACATGCAAACT...GTTCAATTCCCACCACCCACATGGTGGCTTATGACTGTCCTTAATTCCAGATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR GCA 90 bp | GGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAAGCTCTTCTAAGTTACCATaGTCTGTTGCTGATACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GQKRALAPLDLELRTVISSSKLP*SVADTD Trigger: ATCAGTATCAGCAACAGAGCATGGTAACTTAGAAGA...GCTTATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CCA 90 bp | ATAAGTGTTTTGCTCACACCACATGTCTGTGCTTGGTGCCTGAGGAGGTCAGAATATTGTCCTGTTGGCTaGGCCAGGTATGTCATAATA | + |
|
Preference number: 4 (lower is better) Translates to: ISVLLTPHVCAWCLRRSEYCPVG*ARYVII Trigger: TATTATGACATACCTGGCCCAGCCAACAGGACAATA...TTCTGACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CCA 90 bp | GGATCTGGAATTAAGGACAGTCATAAGCCACCATGTGGGTGGTGGGAATTGAACGGCATACTTGCTGACTaGCTCTCTATATTCCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GSGIKDSHKPPCGWWELNGILAD*LSIFQN Trigger: ATTTTGGAATATAGAGAGCCAGTCAGCAAGTATGCC...GTTCAATTCCCACCACCCACATGGTGGCTTATGACTGTCCTTAATTCCAGATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CAA 90 bp | CTGTGCTTGGTGCCTGAGGAGGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGCATGCGCCCTTCTTCTaGCCACTTCAGCCAGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LCLVPEEVRRGHWLPWIWHAPFF*PLQPVP Trigger: TGGCACTGGCTGAAGTGGCAAGAAGAAGGGCGCATG...CCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACCTCCTCAGGCACCAAGCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CCA 90 bp | CTAAGAAGATGGTTCACGATGGTGCCCATGCCGATCAAACACTGCTaGCCCAGGGTGTCCCAGTCCATGCTGCGCAGGATGCTGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LRRWFTMVPMPIKHC*PRVSQSMLRRMLMA Trigger: GGCCATCAGCATCCTGCGCAGCATGGACTGGGACACCCTGGGCCAGCAGTGTTTGATCGGCATGGGCACCATCGTGAACCATCTTCTTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS TCA 90 bp | GCTGCCAACCAGAAGAATGGCGCCACTTGGGTGGCAGCTTATCAATaGAGGCCTAAGTTCAGCCTGGGCCAGGAGAGTCACACCACGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AANQKNGATWVAAYQ*RPKFSLGQESHTTV Trigger: CACCGTGGTGTGACTCTCCTGGCCCAGGCTGAACTTAGGCCTTCATTGATAAGCTGCCACCCAAGTGGCGCCATTCTTCTGGTTGGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS GCA 90 bp | TGTCTAAGAAGATGGTTCACGATGGTGCCCATGCCGATCAAACACTaGTGGCCCAGGGTGTCCCAGTCCATGCTGCGCAGGATGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: CLRRWFTMVPMPIKH*WPRVSQSMLRRMLM Trigger: CATCAGCATCCTGCGCAGCATGGACTGGGACACCCTGGGCCAGCAGTGTTTGATCGGCATGGGCACCATCGTGAACCATCTTCTTAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CCA 90 bp | AGCTCCCCTTGGTTGCTGCCAACCAGAAGAATGGCGCCACTTGGGTaGCAGCTTATCAATGAAGGCCTAAGTTCAGCCTGGGCCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSPWLLPTRRMAPLG*QLINEGLSSAWARR Trigger: TCTCCTGGCCCAGGCTGAACTTAGGCCTTCATTGATAAGCTGCCACCCAAGTGGCGCCATTCTTCTGGTTGGCAGCAACCAAGGGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CAA 90 bp | CTGTGCTTGGTGCCTGAGGAGGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGGCCAAGAGCTGGATGTaGATAGGGGACAGAGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: LCLVPEEVRRGHWLPWIWAKSWM*IGDRAI Trigger: TATTGCTCTGTCCCCTATCAACATCCAGCTCTTGGC...CCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACCTCCTCAGGCACCAAGCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CAA 90 bp | CTGTGCTTGGTGCCTGAGGAGGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGGAACACCTGATAAGGTaGTTTGGTGCCGAAGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LCLVPEEVRRGHWLPWIWEHLIR*FGAEVN Trigger: GTTCACTTCGGCACCAAACAACCTTATCAGGTGTTC...CCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACCTCCTCAGGCACCAAGCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CCA 90 bp | TCAAGCTGTGCTTCTCTCTCTGGTGTGAGCCTCTGTCTAAGAAGATaGTTCACGATGGTGCCCATGCCGATCAAACACTGCTGGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSCASLSGVSLCLRR*FTMVPMPIKHCWPR Trigger: CCTGGGCCAGCAGTGTTTGATCGGCATGGGCACCATCGTGAACCATCTTCTTAGACAGAGGCTCACACCAGAGAGAGAAGCACAGCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CAA 90 bp | GGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAAGCTCAGCCATGGGCTCCTaGTCTACACTGACGGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GQKRALAPLDLELRTVISSAMGS*STLTEH Trigger: GTGCTCCGTCAGTGTAGACAAGGAGCCCATGGCTGA...GCTTATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS TCA 90 bp | ATGAGCTTCCCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTaGGGCCCAGAAAGACTTAGGGACACCAGCACACCTGAACCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: MSFPTRLLSITTFSS*GPERLRDTSTPEPN Trigger: GTTTGGTTCAGGTGTGCTGGTGTCCCTAAGTCTTTCTGGGCCTCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGGGAAGCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS GCA 90 bp | CCCAGGAGCTCGACTCCAGAGGATACTGACTCAACATCAATATCATaGGCCCTTCTTCTTGCCACTTCAGCCAGTGCCAGTTCACCCATA | + |
|
Preference number: 5 (lower is better) Translates to: PRSSTPEDTDSTSIS*ALLLATSASASSPI Trigger: TATGGGTGAACTGGCACTGGCTGAAGTGGCAAGAAGAAGGGCGCATGATATTGATGTTGAGTCAGTATCCTCTGGAGTCGAGCTCCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CAA 90 bp | GGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAAGCCACACACGGACTGCTTaGCATCAGTTCCTCCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: GQKRALAPLDLELRTVISHTRTA*HQFLQL Trigger: GAGTTGGAGGAACTGATGCAAAGCAGTCCGTGTGTG...GCTTATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CAA 90 bp | GGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAAGCCGATCTATTGTCCTGTaGGCTGGGCCAGGTATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GQKRALAPLDLELRTVISRSIVL*AGPGMS Trigger: TGACATACCTGGCCCAGCCAACAGGACAATAGATCG...GCTTATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CAA 90 bp | GGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAAGCGAAGAATGGCGCCACTaGGGTGGCAGCTTATCAATG | + |
|
Preference number: 5 (lower is better) Translates to: GQKRALAPLDLELRTVISEEWRH*GGSLSM Trigger: CATTGATAAGCTGCCACCCAAGTGGCGCCATTCTTC...GCTTATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CAA 90 bp | GGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAAGCTGTAGCTCCCCTTGGTaGCTGCCAACCAGAAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: GQKRALAPLDLELRTVISCSSPW*LPTRRM Trigger: CATTCTTCTGGTTGGCAGCAACCAAGGGGAGCTACA...GCTTATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CCA 90 bp | GTTTCCTTTGGTCTTCTTTCAGTTCTCCTTCTGCATTCCAGGTGGTaGCCCCTGAAGAGTCAGTGCATAACTCCTCCTCTTCCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VSFGLLSVLLLHSRW*PLKSQCITPPLPPP Trigger: AGGAGGAGGAAGAGGAGGAGTTATGCACTGACTCTTCAGGGGCCACCACCTGGAATGCAGAAGGAGAACTGAAAGAAGACCAAAGGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CCA 90 bp | CCTGTTTCCTTTGGTCTTCTTTCAGTTCTCCTTCTGCATTCCAGGTaGTGGCCCCTGAAGAGTCAGTGCATAACTCCTCCTCTTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PVSFGLLSVLLLHSR*WPLKSQCITPPLPP Trigger: AGGAGGAAGAGGAGGAGTTATGCACTGACTCTTCAGGGGCCACCACCTGGAATGCAGAAGGAGAACTGAAAGAAGACCAAAGGAAACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CAA 90 bp | GGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAAGCGCCTTTTCAAATCTCTaGTACCTGAGCAGGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GQKRALAPLDLELRTVISAFSNL*YLSRWW Trigger: CCACCACCTGCTCAGGTACAAGAGATTTGAAAAGGC...GCTTATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS TCA 90 bp | CTGGGCCAGGAGAGTCACACCACGGTGAGCTTCATAGAGAATTACTaGAGAGTCTTCACAGCCCACGATCAGTTTGTCTTCCGTAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LGQESHTTVSFIENY*RVFTAHDQFVFRRV Trigger: AACTCTACGGAAGACAAACTGATCGTGGGCTGTGAAGACTCTTCAGTAATTCTCTATGAAGCTCACCGTGGTGTGACTCTCCTGGCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CAA 90 bp | ATGTATAAGTGTTTTGCTCACACCACATGTCTGTGCTTGGTGCCTGAGGAGGTCCAGCCCACGATCAGTTaGTCTTCCGTAGAGTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: MYKCFAHTTCLCLVPEEVQPTIS*SSVEFL Trigger: CAGGAACTCTACGGAAGACAAACTGATCGTGGGCTG...GACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTATACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CAA 90 bp | AGGAGGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATCCAGAAGTGGTCTTGTaGGAGCATAGAAGGTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RRSEEGTGSLGSGIKDSHPEVVL*EHRRFQ Trigger: TTGGAACCTTCTATGCTCCAACAAGACCACTTCTGG...ATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CAA 90 bp | ATAAGTGTTTTGCTCACACCACATGTCTGTGCTTGGTGCCTGAGGAGGTCAGAACAGTCCTTCTCTCAATaGCCCATCTGCTTGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ISVLLTPHVCAWCLRRSEQSFSQ*PICLKG Trigger: GCCCTTCAAGCAGATGGGCAATTGAGAGAAGGACTG...TTCTGACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS TCA 90 bp | AGGAAGAAGGCCTGGAAACTTGTTTTCTCCTTCAGGCATGAGAGCTaGGCTGGCAAAACCTTCATTCAGCATGTCTCTTCTGTCCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RKKAWKLVFSFRHES*AGKTFIQHVSSVQG Trigger: CCCTTGGACAGAAGAGACATGCTGAATGAAGGTTTTGCCAGCTCAGCTCTCATGCCTGAAGGAGAAAACAAGTTTCCAGGCCTTCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CAA 90 bp | GGATCTGGAATTAAGGACAGTCATAAGCCACCATGTGGGTGGTGGGAATTGAACCCCAGCAACAGCATATaGGCTCTGTCCTTCTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GSGIKDSHKPPCGWWELNPSNSI*ALSFSE Trigger: TTCTGAGAAGGACAGAGCCAATATGCTGTTGCTGGG...GTTCAATTCCCACCACCCACATGGTGGCTTATGACTGTCCTTAATTCCAGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CAA 90 bp | ATGTATAAGTGTTTTGCTCACACCACATGTCTGTGCTTGGTGCCTGAGGAGGTCAACCTCCAATCCTCCTaGAGTAAAGCCCAGCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: MYKCFAHTTCLCLVPEEVNLQSS*SKAQQQ Trigger: CTGTTGCTGGGCTTTACTCAAGGAGGATTGGAGGTT...GACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTATACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS GCA 90 bp | GCTGGCAGATGTATTTGCTCTTCCATTTGCTCAGCACACACGGACTaGTTTGCATCAGTTCCTCCAACTCCTTCAGTGAATCTCGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: AGRCICSSICSAHTD*FASVPPTPSVNLEV Trigger: AACTTCGAGATTCACTGAAGGAGTTGGAGGAACTGATGCAAAGCAGTCCGTGTGTGCTGAGCAAATGGAAGAGCAAATACATCTGCCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CCA 90 bp | GTACCTGAGCAGGTGGTGGAAGAGCCTCCTGGCATACTTGCTGACTaGCTCTCTATATTCCAAAATAGTTGTATCCAGAAGTGGTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VPEQVVEEPPGILAD*LSIFQNSCIQKWSC Trigger: ACAAGACCACTTCTGGATACAACTATTTTGGAATATAGAGAGCCAGTCAGCAAGTATGCCAGGAGGCTCTTCCACCACCTGCTCAGGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CCA 90 bp | ACAGCTAGAAGAAAGGCCTTTTCAAATCTCTTGTACCTGAGCAGGTaGTGGAAGAGCCTCCTGGCATACTTGCTGACTGGCTCTCTATAT | + |
|
Preference number: 5 (lower is better) Translates to: TARRKAFSNLLYLSR*WKSLLAYLLTGSLY Trigger: ATATAGAGAGCCAGTCAGCAAGTATGCCAGGAGGCTCTTCCACCACCTGCTCAGGTACAAGAGATTTGAAAAGGCCTTTCTTCTAGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CAA 90 bp | AGGAGGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAGTTACCATGCTCTGTaGCTGATACTGATGGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: RRSEEGTGSLGSGIKDSHSYHAL*LILMDL Trigger: AAGATCCATCAGTATCAGCAACAGAGCATGGTAACT...ATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CAA 90 bp | ATGTATAAGTGTTTTGCTCACACCACATGTCTGTGCTTGGTGCCTGAGGAGGTCTATTTGCTCTTCCATTaGCTCAGCACACACGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: MYKCFAHTTCLCLVPEEVYLLFH*LSTHGL Trigger: CAGTCCGTGTGTGCTGAGCAAATGGAAGAGCAAATA...GACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTATACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CAA 90 bp | ATGTATAAGTGTTTTGCTCACACCACATGTCTGTGCTTGGTGCCTGAGGAGGTCCCCAAAGGTCCTTTGTaGAACCTGAGGAAGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: MYKCFAHTTCLCLVPEEVPKGPL*NLRKRR Trigger: TCTTCTCTTCCTCAGGTTCAACAAAGGACCTTTGGG...GACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTATACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CAA 90 bp | GGATCTGGAATTAAGGACAGTCATAAGCCACCATGTGGGTGGTGGGAATTGAACACACCCAAAGGTCCTTaGTTGAACCTGAGGAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GSGIKDSHKPPCGWWELNTPKGP*LNLRKR Trigger: TCTCTTCCTCAGGTTCAACAAAGGACCTTTGGGTGT...GTTCAATTCCCACCACCCACATGGTGGCTTATGACTGTCCTTAATTCCAGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CAA 90 bp | AGGAGGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATTGCTTGAAGGGCCATTaGGTATTTTCTGTTGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RRSEEGTGSLGSGIKDSHCLKGH*VFSVEE Trigger: CTCTTCAACAGAAAATACCAAATGGCCCTTCAAGCA...ATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS TCA 90 bp | CAATGGAAGGAAGAAGGCCTGGAAACTTGTTTTCTCCTTCAGGCATaGGAGCTGAGCTGGCAAAACCTTCATTCAGCATGTCTCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QWKEEGLETCFLLQA*ELSWQNLHSACLFC Trigger: ACAGAAGAGACATGCTGAATGAAGGTTTTGCCAGCTCAGCTCTCATGCCTGAAGGAGAAAACAAGTTTCCAGGCCTTCTTCCTTCCATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CCA 90 bp | CTTGCTGACTGGCTCTCTATATTCCAAAATAGTTGTATCCAGAAGTaGTCTTGTTGGAGCATAGAAGGTTCCAAGGCTCGCCTCAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LADWLSIFQNSCIQK*SCWSIEGSKARLKL Trigger: CAGCTTGAGGCGAGCCTTGGAACCTTCTATGCTCCAACAAGACCACTTCTGGATACAACTATTTTGGAATATAGAGAGCCAGTCAGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CAA 90 bp | GGTCAGAAGAGGGCACTGGCTCCCTTGGATCTGGAATTAAGGACAGTCATAAGCACATCAAAGAACTTCTaGAATTGCAGAGTCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GQKRALAPLDLELRTVISTSKNF*NCRVSF Trigger: GAAGGAGACTCTGCAATTCAAGAAGTTCTTTGATGT...GCTTATGACTGTCCTTAATTCCAGATCCAAGGGAGCCAGTGCCCTCTTCTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CAA 90 bp | ATAAGTGTTTTGCTCACACCACATGTCTGTGCTTGGTGCCTGAGGAGGTCAGAATATCCAGAAGTGGTCTaGTTGGAGCATAGAAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ISVLLTPHVCAWCLRRSEYPEVV*LEHRRF Trigger: GAACCTTCTATGCTCCAACAAGACCACTTCTGGATA...TTCTGACCTCCTCAGGCACCAAGCACAGACATGTGGTGTGAGCAAAACACTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS TCA 90 bp | CTCCTCCTCTTCTTCCTCAGTCCTTCTCTCAATTGCCCATCTGCTTaGAGGGCCATTTGGTATTTTCTGTTGAAGAGTTTGCATGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLLFFLSPSLNCPSA*RAIWYFLLKSLHVC Trigger: ACACACATGCAAACTCTTCAACAGAAAATACCAAATGGCCCTTCAAGCAGATGGGCAATTGAGAGAAGGACTGAGGAAGAAGAGGAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CCA 90 bp | TGGCTCTCTATATTCCAAAATAGTTGTATCCAGAAGTGGTCTTGTTaGAGCATAGAAGGTTCCAAGGCTCGCCTCAAGCTGTGCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WLSIFQNSCIQKWSC*SIEGSKARLKLCFS Trigger: AGAGAAGCACAGCTTGAGGCGAGCCTTGGAACCTTCTATGCTCCAACAAGACCACTTCTGGATACAACTATTTTGGAATATAGAGAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS-3UTR CAA 90 bp | GGATCTGGAATTAAGGACAGTCATAAGCCACCATGTGGGTGGTGGGAATTGAACAATGTCCTGTTTCCTTaGGTCTTCTTTCAGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSGIKDSHKPPCGWWELNNVLFP*VFFQFS Trigger: GGAGAACTGAAAGAAGACCAAAGGAAACAGGACATT...GTTCAATTCCCACCACCCACATGGTGGCTTATGACTGTCCTTAATTCCAGATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS GCA 90 bp | CAGATGTATTTGCTCTTCCATTTGCTCAGCACACACGGACTGCTTTaGATCAGTTCCTCCAACTCCTTCAGTGAATCTCGAAGTTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QMYLLFHLLSTHGLL*ISSSNSFSESRSFS Trigger: AGAAAAACTTCGAGATTCACTGAAGGAGTTGGAGGAACTGATGCAAAGCAGTCCGTGTGTGCTGAGCAAATGGAAGAGCAAATACATCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020568.10 ENSMUST00000131135.3 |
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| CDS TCA 90 bp | CCAACTCCTTCAGTGAATCTCGAAGTTTTTCTGGGCGTCTATTTTTaGGTGTCCAAGGATAATCTCGTGATTCTGCCAGCCTTTGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PTPSVNLEVFLGVYF*VSKDNLVILPAFVF Trigger: AAAAACAAAGGCTGGCAGAATCACGAGATTATCCTTGGACACTCAAAAATAGACGCCCAGAAAAACTTCGAGATTCACTGAAGGAGTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020568.10 ENSMUST00000131135.3 |
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| CDS TCA 90 bp | TCCACTGCATTTGAACAAGACTGCTTGAAACATCAAAGAACTTCTTaGATTGCAGAGTCTCCTTCGGTGAGTAATCTTCTGCCAAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: STAFEQDCLKHQRTS*IAESPSVSNLLPRA Trigger: AGCTCTTGGCAGAAGATTACTCACCGAAGGAGACTCTGCAATTCAAGAAGTTCTTTGATGTTTCAAGCAGTCTTGTTCAAATGCAGTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS TCA 90 bp | CTTTTAGGCTTCTGGAAAACAACAGGAGGAGCCATCCACTGCATTTaGACAAGACTGCTTGAAACATCAAAGAACTTCTTGAATTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLGFWKTTGGAIHCI*TRLLETSKNFLNCR Trigger: TCTGCAATTCAAGAAGTTCTTTGATGTTTCAAGCAGTCTTGTTCAAATGCAGTGGATGGCTCCTCCTGTTGTTTTCCAGAAGCCTAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS GCA 72 bp | AGATGGTTCACGATGGTGCCCATGCCGATCAAACACTaGTGGCCCAGGGTGTCCCAGTCCATGCTGCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RWFTMVPMPIKH*WPRVSQSMLRR Trigger: CCTGCGCAGCATGGACTGGGACACCCTGGGCCAGCAGTGTTTGATCGGCATGGGCACCATCGTGAACCATCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CCA 72 bp | TGGTTCACGATGGTGCCCATGCCGATCAAACACTGCTaGCCCAGGGTGTCCCAGTCCATGCTGCGCAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: WFTMVPMPIKHC*PRVSQSMLRRM Trigger: CATCCTGCGCAGCATGGACTGGGACACCCTGGGCCAGCAGTGTTTGATCGGCATGGGCACCATCGTGAACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS GCA 72 bp | CTTCTGCATTCCAGGTGGTGGCCCCTGAAGAGTCAGTaGATAACTCCTCCTCTTCCTCCTCCTCCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LLHSRWWPLKSQ*ITPPLPPPPPP Trigger: AGGAGGAGGAGGAGGAGGAAGAGGAGGAGTTATGCACTGACTCTTCAGGGGCCACCACCTGGAATGCAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS TCA 72 bp | CCCACCAGGCTTCTGTCAATCACCACTTTCTCCAGCTaGGGCCCAGAAAGACTTAGGGACACCAGCACACCT | + |
|
Preference number: 6 (lower is better) Translates to: PTRLLSITTFSS*GPERLRDTSTP Trigger: AGGTGTGCTGGTGTCCCTAAGTCTTTCTGGGCCTCAGCTGGAGAAAGTGGTGATTGACAGAAGCCTGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS TCA 72 bp | CAGAAGAATGGCGCCACTTGGGTGGCAGCTTATCAATaGAGGCCTAAGTTCAGCCTGGGCCAGGAGAGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: QKNGATWVAAYQ*RPKFSLGQESH Trigger: GTGACTCTCCTGGCCCAGGCTGAACTTAGGCCTTCATTGATAAGCTGCCACCCAAGTGGCGCCATTCTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS TCA 72 bp | GTCCAAGGGCCCCAGGAGCTCGACTCCAGAGGATACTaGCTCAACATCAATATCATGCGCCCTTCTTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VQGPQELDSRGY*LNINIMRPSSC Trigger: GCAAGAAGAAGGGCGCATGATATTGATGTTGAGTCAGTATCCTCTGGAGTCGAGCTCCTGGGGCCCTTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CCA 72 bp | TGGTTGCTGCCAACCAGAAGAATGGCGCCACTTGGGTaGCAGCTTATCAATGAAGGCCTAAGTTCAGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WLLPTRRMAPLG*QLINEGLSSAW Trigger: CCAGGCTGAACTTAGGCCTTCATTGATAAGCTGCCACCCAAGTGGCGCCATTCTTCTGGTTGGCAGCAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CCA 72 bp | TTTGTAGCTCCCCTTGGTTGCTGCCAACCAGAAGAATaGCGCCACTTGGGTGGCAGCTTATCAATGAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: FVAPLGCCQPEE*RHLGGSLSMKA Trigger: GGCCTTCATTGATAAGCTGCCACCCAAGTGGCGCCATTCTTCTGGTTGGCAGCAACCAAGGGGAGCTACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CCA 72 bp | GCTTCTCTCTCTGGTGTGAGCCTCTGTCTAAGAAGATaGTTCACGATGGTGCCCATGCCGATCAAACACTGC | + |
|
Preference number: 6 (lower is better) Translates to: ASLSGVSLCLRR*FTMVPMPIKHC Trigger: GCAGTGTTTGATCGGCATGGGCACCATCGTGAACCATCTTCTTAGACAGAGGCTCACACCAGAGAGAGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CAA 72 bp | ACTGACGGAGCACTCCACTGTGAACACCTGATAAGGTaGTTTGGTGCCGAAGTGAACATCCAGGGGACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TDGALHCEHLIR*FGAEVNIQGTP Trigger: TGGAGTCCCCTGGATGTTCACTTCGGCACCAAACAACCTTATCAGGTGTTCACAGTGGAGTGCTCCGTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CAA 90 bp | CTTGTCTACACTGACGGAGCACTCCACTGTGAACACCTGATAAGGTaGTTTGGTGCCGAAGTGAACATCCAGGGGACTCCATTCTGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: LVYTDGALHCEHLIR*FGAEVNIQGTPFCA Trigger: CGCACAGAATGGAGTCCCCTGGATGTTCACTTCGGCACCAAACAACCTTATCAGGTGTTCACAGTGGAGTGCTCCGTCAGTGTAGACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS GCA 72 bp | GAGCAATATCAAAAATTTGTAGCTCCCCTTGGTTGCTaGCAACCAGAAGAATGGCGCCACTTGGGTGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: EQYQKFVAPLGC*QPEEWRHLGGS Trigger: GCTGCCACCCAAGTGGCGCCATTCTTCTGGTTGGCAGCAACCAAGGGGAGCTACAAATTTTTGATATTGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CCA 72 bp | AAGGCCTTTTCAAATCTCTTGTACCTGAGCAGGTGGTaGAAGAGCCTCCTGGCATACTTGCTGACTGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: KAFSNLLYLSRW*KSLLAYLLTGS Trigger: AGAGCCAGTCAGCAAGTATGCCAGGAGGCTCTTCCACCACCTGCTCAGGTACAAGAGATTTGAAAAGGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CCA 72 bp | AGAAAGGCCTTTTCAAATCTCTTGTACCTGAGCAGGTaGTGGAAGAGCCTCCTGGCATACTTGCTGACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RKAFSNLLYLSR*WKSLLAYLLTG Trigger: GCCAGTCAGCAAGTATGCCAGGAGGCTCTTCCACCACCTGCTCAGGTACAAGAGATTTGAAAAGGCCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CAA 90 bp | ACACCTGAACCAAACAGGAGCTGGCAGATGTATTTGCTCTTCCATTaGCTCAGCACACACGGACTGCTTTGCATCAGTTCCTCCAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: TPEPNRSWQMYLLFH*LSTHGLLCISSSNS Trigger: GGAGTTGGAGGAACTGATGCAAAGCAGTCCGTGTGTGCTGAGCAAATGGAAGAGCAAATACATCTGCCAGCTCCTGTTTGGTTCAGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CAA 90 bp | CGAGCTCCAATGTCAACAGCTAGAAGAAAGGCCTTTTCAAATCTCTaGTACCTGAGCAGGTGGTGGAAGAGCCTCCTGGCATACTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RAPMSTARRKAFSNL*YLSRWWKSLLAYLL Trigger: CAGCAAGTATGCCAGGAGGCTCTTCCACCACCTGCTCAGGTACAAGAGATTTGAAAAGGCCTTTCTTCTAGCTGTTGACATTGGAGCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS TCA 72 bp | GAAACTGTCTGTAAGGAGAGCATCACTGATGGTGTCTaGGATGAGCTTCCCCACCAGGCTTCTGTCAATCAC | + |
|
Preference number: 6 (lower is better) Translates to: ETVCKESITDGV*DELPHQASVNH Trigger: GTGATTGACAGAAGCCTGGTGGGGAAGCTCATCTCAGACACCATCAGTGATGCTCTCCTTACAGACAGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS TCA 72 bp | CAGAAGAAACTGGAGTCCAAGGCCAAACATCATCACTaGCCAGCGGCCACCAACAAACAACTAGATCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: QKKLESKAKHHH*PAATNKQLDPE Trigger: CTCAGGATCTAGTTGTTTGTTGGTGGCCGCTGGTCAGTGATGATGTTTGGCCTTGGACTCCAGTTTCTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS TCA 72 bp | CAGCTAGAAGAAAGGCCTTTTCAAATCTCTTGTACCTaGGCAGGTGGTGGAAGAGCCTCCTGGCATACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: QLEERPFQISCT*AGGGRASWHTC Trigger: GCAAGTATGCCAGGAGGCTCTTCCACCACCTGCTCAGGTACAAGAGATTTGAAAAGGCCTTTCTTCTAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS GCA 72 bp | GGTAGACGCCGATGTCTCTATCCGCAATGTGTAAGGTaGTTTTCAGAGACCACAGGTGTAGTTCAGTCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GRRRCLYPQCVR*FSETTGVVQSS Trigger: GCTTGACTGAACTACACCTGTGGTCTCTGAAAAGCACCTTACACATTGCGGATAGAGACATCGGCGTCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020568.10 ENSMUST00000131135.3 |
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| CDS GCA 72 bp | ACAGAGCAATATCAAAAATTTGTAGCTCCCCTTGGTTaGTGCCAACCAGAAGAATGGCGCCACTTGGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: TEQYQKFVAPLG*CQPEEWRHLGG Trigger: GCCACCCAAGTGGCGCCATTCTTCTGGTTGGCAGCAACCAAGGGGAGCTACAAATTTTTGATATTGCTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS GCA 72 bp | TCGACTCCAGAGGATACTGACTCAACATCAATATCATaGGCCCTTCTTCTTGCCACTTCAGCCAGTGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: STPEDTDSTSIS*ALLLATSASAS Trigger: ACTGGCACTGGCTGAAGTGGCAAGAAGAAGGGCGCATGATATTGATGTTGAGTCAGTATCCTCTGGAGTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CCA 72 bp | TTTGGTCTTCTTTCAGTTCTCCTTCTGCATTCCAGGTaGTGGCCCCTGAAGAGTCAGTGCATAACTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: FGLLSVLLLHSR*WPLKSQCITPP Trigger: AGGAGGAGTTATGCACTGACTCTTCAGGGGCCACCACCTGGAATGCAGAAGGAGAACTGAAAGAAGACCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CAA 72 bp | CCAAACAGGAGCTGGCAGATGTATTTGCTCTTCCATTaGCTCAGCACACACGGACTGCTTTGCATCAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PNRSWQMYLLFH*LSTHGLLCISS Trigger: GGAACTGATGCAAAGCAGTCCGTGTGTGCTGAGCAAATGGAAGAGCAAATACATCTGCCAGCTCCTGTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CAA 72 bp | AGAATTACTGAAGAGTCTTCACAGCCCACGATCAGTTaGTCTTCCGTAGAGTTCCTGCAGCAGCTGATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RITEESSQPTIS*SSVEFLQQLMA Trigger: GGCCATCAGCTGCTGCAGGAACTCTACGGAAGACAAACTGATCGTGGGCTGTGAAGACTCTTCAGTAATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CAA 72 bp | GACAGAGCAATATCAAAAATTTGTAGCTCCCCTTGGTaGCTGCCAACCAGAAGAATGGCGCCACTTGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: DRAISKICSSPW*LPTRRMAPLGW Trigger: CCACCCAAGTGGCGCCATTCTTCTGGTTGGCAGCAACCAAGGGGAGCTACAAATTTTTGATATTGCTCTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CAA 90 bp | CTCCAGAGGATACTGACTCAACATCAATATCATGCGCCCTTCTTCTaGCCACTTCAGCCAGTGCCAGTTCACCCATATCTAGAGCAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LQRILTQHQYHAPFF*PLQPVPVHPYLEQG Trigger: ACCTTGCTCTAGATATGGGTGAACTGGCACTGGCTGAAGTGGCAAGAAGAAGGGCGCATGATATTGATGTTGAGTCAGTATCCTCTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS GCA 72 bp | TTGCTCTTCCATTTGCTCAGCACACACGGACTGCTTTaGATCAGTTCCTCCAACTCCTTCAGTGAATCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: LLFHLLSTHGLL*ISSSNSFSESR Trigger: TCGAGATTCACTGAAGGAGTTGGAGGAACTGATGCAAAGCAGTCCGTGTGTGCTGAGCAAATGGAAGAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020568.10 ENSMUST00000131135.3 |
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| CDS CAA 72 bp | TGTGTTGAACCAATGGAAGGAAGAAGGCCTGGAAACTaGTTTTCTCCTTCAGGCATGAGAGCTGAGCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: CVEPMEGRRPGN*FSPSGMRAELA Trigger: TGCCAGCTCAGCTCTCATGCCTGAAGGAGAAAACAAGTTTCCAGGCCTTCTTCCTTCCATTGGTTCAACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CAA 90 bp | GTTTGCATGTGTGTTGAACCAATGGAAGGAAGAAGGCCTGGAAACTaGTTTTCTCCTTCAGGCATGAGAGCTGAGCTGGCAAAACCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: VCMCVEPMEGRRPGN*FSPSGMRAELAKPS Trigger: TGAAGGTTTTGCCAGCTCAGCTCTCATGCCTGAAGGAGAAAACAAGTTTCCAGGCCTTCTTCCTTCCATTGGTTCAACACACATGCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CAA 90 bp | CCTCCTCCTCTTCTTCCTCAGTCCTTCTCTCAATTGCCCATCTGCTaGAAGGGCCATTTGGTATTTTCTGTTGAAGAGTTTGCATGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PPPLLPQSFSQLPIC*KGHLVFSVEEFACV Trigger: CACACATGCAAACTCTTCAACAGAAAATACCAAATGGCCCTTCAAGCAGATGGGCAATTGAGAGAAGGACTGAGGAAGAAGAGGAGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS TCA 72 bp | GAGAGTCACACCACGGTGAGCTTCATAGAGAATTACTaGAGAGTCTTCACAGCCCACGATCAGTTTGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ESHTTVSFIENY*RVFTAHDQFVF Trigger: GAAGACAAACTGATCGTGGGCTGTGAAGACTCTTCAGTAATTCTCTATGAAGCTCACCGTGGTGTGACTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CCA 72 bp | CAGGTGGTGGAAGAGCCTCCTGGCATACTTGCTGACTaGCTCTCTATATTCCAAAATAGTTGTATCCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QVVEEPPGILAD*LSIFQNSCIQK Trigger: CTTCTGGATACAACTATTTTGGAATATAGAGAGCCAGTCAGCAAGTATGCCAGGAGGCTCTTCCACCACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CAA 72 bp | TACCTGAGCAGGTGGTGGAAGAGCCTCCTGGCATACTaGCTGACTGGCTCTCTATATTCCAAAATAGTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: YLSRWWKSLLAY*LTGSLYSKIVV Trigger: TACAACTATTTTGGAATATAGAGAGCCAGTCAGCAAGTATGCCAGGAGGCTCTTCCACCACCTGCTCAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CAA 90 bp | AATCTCTTGTACCTGAGCAGGTGGTGGAAGAGCCTCCTGGCATACTaGCTGACTGGCTCTCTATATTCCAAAATAGTTGTATCCAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: NLLYLSRWWKSLLAY*LTGSLYSKIVVSRS Trigger: ACTTCTGGATACAACTATTTTGGAATATAGAGAGCCAGTCAGCAAGTATGCCAGGAGGCTCTTCCACCACCTGCTCAGGTACAAGAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS GCA 72 bp | TGTATTTGCTCTTCCATTTGCTCAGCACACACGGACTaGTTTGCATCAGTTCCTCCAACTCCTTCAGTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: CICSSICSAHTD*FASVPPTPSVN Trigger: ATTCACTGAAGGAGTTGGAGGAACTGATGCAAAGCAGTCCGTGTGTGCTGAGCAAATGGAAGAGCAAATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020568.10 ENSMUST00000131135.3 |
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| CDS GCA 72 bp | CCTCTTCTTCCTCAGTCCTTCTCTCAATTGCCCATCTaGTTGAAGGGCCATTTGGTATTTTCTGTTGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PLLPQSFSQLPI*LKGHLVFSVEE Trigger: CTCTTCAACAGAAAATACCAAATGGCCCTTCAAGCAGATGGGCAATTGAGAGAAGGACTGAGGAAGAAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CCA 72 bp | CTGAGAGAACCAACATCTCCAATGTCCTGTTTCCTTTaGTCTTCTTTCAGTTCTCCTTCTGCATTCCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LREPTSPMSCFL*SSFSSPSAFQV Trigger: CACCTGGAATGCAGAAGGAGAACTGAAAGAAGACCAAAGGAAACAGGACATTGGAGATGTTGGTTCTCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CAA 72 bp | ATACTGACTCAACATCAATATCATGCGCCCTTCTTCTaGCCACTTCAGCCAGTGCCAGTTCACCCATATCTA | + |
|
Preference number: 6 (lower is better) Translates to: ILTQHQYHAPFF*PLQPVPVHPYL Trigger: TAGATATGGGTGAACTGGCACTGGCTGAAGTGGCAAGAAGAAGGGCGCATGATATTGATGTTGAGTCAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CAA 90 bp | GTGAGGATGCCAAGTTTAAACAGTAGCACACCCAAAGGTCCTTTGTaGAACCTGAGGAAGAGAAGATCACAGATTTCTCCTCTTTTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VRMPSLNSSTPKGPL*NLRKRRSQISPLLG Trigger: GCCTAAAAGAGGAGAAATCTGTGATCTTCTCTTCCTCAGGTTCAACAAAGGACCTTTGGGTGTGCTACTGTTTAAACTTGGCATCCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CAA 90 bp | CTTCCTCAGTCCTTCTCTCAATTGCCCATCTGCTTGAAGGGCCATTaGGTATTTTCTGTTGAAGAGTTTGCATGTGTGTTGAACCAATGG | + |
|
Preference number: 6 (lower is better) Translates to: LPQSFSQLPICLKGH*VFSVEEFACVLNQW Trigger: CCATTGGTTCAACACACATGCAAACTCTTCAACAGAAAATACCAAATGGCCCTTCAAGCAGATGGGCAATTGAGAGAAGGACTGAGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS TCA 72 bp | TCAGTGAATCTCGAAGTTTTTCTGGGCGTCTATTTTTaGGTGTCCAAGGATAATCTCGTGATTCTGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SVNLEVFLGVYF*VSKDNLVILPA Trigger: GGCTGGCAGAATCACGAGATTATCCTTGGACACTCAAAAATAGACGCCCAGAAAAACTTCGAGATTCACTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020568.10 ENSMUST00000131135.3 |
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| CDS TCA 72 bp | GCCCATCTGCTTGAAGGGCCATTTGGTATTTTCTGTTaGAGAGTTTGCATGTGTGTTGAACCAATGGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: AHLLEGPFGIFC*RVCMCVEPMEG Trigger: TCCTTCCATTGGTTCAACACACATGCAAACTCTTCAACAGAAAATACCAAATGGCCCTTCAAGCAGATGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CCA 72 bp | ATATTCCAAAATAGTTGTATCCAGAAGTGGTCTTGTTaGAGCATAGAAGGTTCCAAGGCTCGCCTCAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: IFQNSCIQKWSC*SIEGSKARLKL Trigger: CAGCTTGAGGCGAGCCTTGGAACCTTCTATGCTCCAACAAGACCACTTCTGGATACAACTATTTTGGAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CAA 72 bp | TCTGAGAGAACCAACATCTCCAATGTCCTGTTTCCTTaGGTCTTCTTTCAGTTCTCCTTCTGCATTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: SERTNISNVLFP*VFFQFSFCIPG Trigger: ACCTGGAATGCAGAAGGAGAACTGAAAGAAGACCAAAGGAAACAGGACATTGGAGATGTTGGTTCTCTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CAA 90 bp | CGTGTGAGGATGCCAAGTTTAAACAGTAGCACACCCAAAGGTCCTTaGTTGAACCTGAGGAAGAGAAGATCACAGATTTCTCCTCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: RVRMPSLNSSTPKGP*LNLRKRRSQISPLL Trigger: TAAAAGAGGAGAAATCTGTGATCTTCTCTTCCTCAGGTTCAACAAAGGACCTTTGGGTGTGCTACTGTTTAAACTTGGCATCCTCACACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS TCA 72 bp | ATCAAAGAACTTCTTGAATTGCAGAGTCTCCTTCGGTaGGTAATCTTCTGCCAAGAGCTGGATGTTGATAGG | + |
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Preference number: 6 (lower is better) Translates to: IKELLELQSLLR*VIFCQELDVDR Trigger: CCTATCAACATCCAGCTCTTGGCAGAAGATTACTCACCGAAGGAGACTCTGCAATTCAAGAAGTTCTTTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS TCA 72 bp | TTCTTCCTCAGTCCTTCTCTCAATTGCCCATCTGCTTaGAGGGCCATTTGGTATTTTCTGTTGAAGAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: FFLSPSLNCPSA*RAIWYFLLKSL Trigger: CAAACTCTTCAACAGAAAATACCAAATGGCCCTTCAAGCAGATGGGCAATTGAGAGAAGGACTGAGGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CAA 72 bp | CCAAGTTTAAACAGTAGCACACCCAAAGGTCCTTTGTaGAACCTGAGGAAGAGAAGATCACAGATTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PSLNSSTPKGPL*NLRKRRSQISP Trigger: AGGAGAAATCTGTGATCTTCTCTTCCTCAGGTTCAACAAAGGACCTTTGGGTGTGCTACTGTTTAAACTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CAA 72 bp | CTTCTTCCTCAGTCCTTCTCTCAATTGCCCATCTGCTaGAAGGGCCATTTGGTATTTTCTGTTGAAGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: LLPQSFSQLPIC*KGHLVFSVEEF Trigger: AAACTCTTCAACAGAAAATACCAAATGGCCCTTCAAGCAGATGGGCAATTGAGAGAAGGACTGAGGAAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS TCA 72 bp | AGGTATGTCATAATAGGAAATCTTAAGGTCCAAGGCTaGGAGTTTCTCCAGCCTCTTGTTTCCATCAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: RYVIIGNLKVQG*EFLQPLVSIKR Trigger: TCTCTTGATGGAAACAAGAGGCTGGAGAAACTCTCAGCCTTGGACCTTAAGATTTCCTATTATGACATACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS TCA 72 bp | TTCTGGAAAACAACAGGAGGAGCCATCCACTGCATTTaGACAAGACTGCTTGAAACATCAAAGAACTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: FWKTTGGAIHCI*TRLLETSKNFL Trigger: CAAGAAGTTCTTTGATGTTTCAAGCAGTCTTGTTCAAATGCAGTGGATGGCTCCTCCTGTTGTTTTCCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS CAA 72 bp | ATGCCAAGTTTAAACAGTAGCACACCCAAAGGTCCTTaGTTGAACCTGAGGAAGAGAAGATCACAGATTTCT | + |
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Preference number: 6 (lower is better) Translates to: MPSLNSSTPKGP*LNLRKRRSQIS Trigger: AGAAATCTGTGATCTTCTCTTCCTCAGGTTCAACAAAGGACCTTTGGGTGTGCTACTGTTTAAACTTGGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS TCA 72 bp | TTTGAACAAGACTGCTTGAAACATCAAAGAACTTCTTaGATTGCAGAGTCTCCTTCGGTGAGTAATCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: FEQDCLKHQRTS*IAESPSVSNLL Trigger: CAGAAGATTACTCACCGAAGGAGACTCTGCAATTCAAGAAGTTCTTTGATGTTTCAAGCAGTCTTGTTCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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| CDS TCA 72 bp | ATTTGGTATTTTCTGTTGAAGAGTTTGCATGTGTGTTaGACCAATGGAAGGAAGAAGGCCTGGAAACTTGTT | + |
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Preference number: 6 (lower is better) Translates to: IWYFLLKSLHVC*TNGRKKAWKLV Trigger: AACAAGTTTCCAGGCCTTCTTCCTTCCATTGGTTCAACACACATGCAAACTCTTCAACAGAAAATACCAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020568.10 |
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