RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WDFY2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000014547

Ensembl transcript IDs: ENSMUST00000014691.10

Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCTCTCACATTGCAGCCAGCCACCAGGGGTGTGGCTGTGTGAGGTaGACACCAGGCCTTCCCAGTGCCAGAGAGCAGAAGCGGCTTGTC +
Preference number: 1 (lower is better)
Translates to: CSHIAASHQGCGCVR*TPGLPSAREQKRLV
Trigger: GACAAGCCGCTTCTGCTCTCTGGCACTGGGAAGGCCTGGTGTGCACCTCACACAGCCACACCCCTGGTGGCTGGCTGCAATGTGAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 90 bp AGTGGCGGAGGACCCACACTCGCTGGGAGCCTCGGTCTCTCTTCTTaGTCATCCAGAAGCTCTCTTTCCTCCTCCCGGGAGGATGCTGGA +
Preference number: 1 (lower is better)
Translates to: SGGGPTLAGSLGLSS*SSRSSLSSSREDAG
Trigger: TCCAGCATCCTCCCGGGAGGAGGAAAGAGAGCTTCTGGATGAGCAAGAAGAGAGACCGAGGCTCCCAGCGAGTGTGGGTCCTCCGCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 90 bp GAGCCAAGCACTGTGCCAGCCCTCATGCCTGGTGGACGAGGTCAGTaGCTGGACACCGTGAGCACCAGCATGCATTCCCCGTGGGTTAAT +
Preference number: 1 (lower is better)
Translates to: EPSTVPALMPGGRGQ*LDTVSTSMHSPWVN
Trigger: ATTAACCCACGGGGAATGCATGCTGGTGCTCACGGTGTCCAGGCACTGACCTCGTCCACCAGGCATGAGGGCTGGCACAGTGCTTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 90 bp CCAGAGGAGAAACGAGCCAAGCACTGTGCCAGCCCTCATGCCTGGTaGACGAGGTCAGTGCCTGGACACCGTGAGCACCAGCATGCATTC +
Preference number: 1 (lower is better)
Translates to: PEEKRAKHCASPHAW*TRSVPGHREHQHAF
Trigger: GAATGCATGCTGGTGCTCACGGTGTCCAGGCACTGACCTCGTCCACCAGGCATGAGGGCTGGCACAGTGCTTGGCTCGTTTCTCCTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 90 bp AATCACAGTGGTGATGACGCCCTGGAGAGAGTTCTGCTCTCACATTaGAGCCAGCCACCAGGGGTGTGGCTGTGTGAGGTGCACACCAGG +
Preference number: 1 (lower is better)
Translates to: NHSGDDALERVLLSH*SQPPGVWLCEVHTR
Trigger: CCTGGTGTGCACCTCACACAGCCACACCCCTGGTGGCTGGCTGCAATGTGAGAGCAGAACTCTCTCCAGGGCGTCATCACCACTGTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 90 bp AGAGAACGCCAGAGCAGAGCTGCAAGGGACTTCCGACAATGTACCTaGTCCCTCCAGGTGACTCAAGAGGCCAGCTGTTGGACACGCATG +
Preference number: 1 (lower is better)
Translates to: RERQSRAARDFRQCT*SLQVTQEASCWTRM
Trigger: CATGCGTGTCCAACAGCTGGCCTCTTGAGTCACCTGGAGGGAGCAGGTACATTGTCGGAAGTCCCTTGCAGCTCTGCTCTGGCGTTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 90 bp GTCCTGGCTGATGGTCAGCAGAGGCTGCTGCAGCATTTTCTAGTGTaGATGGCAGAGAACGCCAGAGCAGAGCTGCAAGGGACTTCCGAC +
Preference number: 1 (lower is better)
Translates to: VLADGQQRLLQHFLV*MAENARAELQGTSD
Trigger: GTCGGAAGTCCCTTGCAGCTCTGCTCTGGCGTTCTCTGCCATCCACACTAGAAAATGCTGCAGCAGCCTCTGCTGACCATCAGCCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 90 bp ACTCAGGACCACCTCATCACATTTAGAAGGCCAGGGTCTTGTTGGTaGGCCTGGTTGGTGGAGTCCAGTGGCACAGAGCACAGCAGCTGC +
Preference number: 1 (lower is better)
Translates to: TQDHLITFRRPGSCW*AWLVESSGTEHSSC
Trigger: GCAGCTGCTGTGCTCTGTGCCACTGGACTCCACCAACCAGGCCCACCAACAAGACCCTGGCCTTCTAAATGTGATGAGGTGGTCCTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 90 bp TCATCACATTTAGAAGGCCAGGGTCTTGTTGGTGGGCCTGGTTGGTaGAGTCCAGTGGCACAGAGCACAGCAGCTGCAGAGGAGTATGGC +
Preference number: 1 (lower is better)
Translates to: SSHLEGQGLVGGPGW*SPVAQSTAAAEEYG
Trigger: GCCATACTCCTCTGCAGCTGCTGTGCTCTGTGCCACTGGACTCCACCAACCAGGCCCACCAACAAGACCCTGGCCTTCTAAATGTGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 90 bp TTCTTGCTCATCCAGAAGCTCTCTTTCCTCCTCCCGGGAGGATGCTaGACTCAAGTGCTTCTTCAGGGACACTGTCTCCTAGTCCCTGGG +
Preference number: 1 (lower is better)
Translates to: FLLIQKLSFLLPGGC*TQVLLQGHCLLVPG
Trigger: CCCAGGGACTAGGAGACAGTGTCCCTGAAGAAGCACTTGAGTCCAGCATCCTCCCGGGAGGAGGAAAGAGAGCTTCTGGATGAGCAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 90 bp TTCATTCAAGTCCTCTGTGCCAGGCAACACCTGTTAGGCAAGAAGTaGGCAAGGTACTGTGGTGGATGGCATGGAGAGGGTAGGGCGAGC +
Preference number: 1 (lower is better)
Translates to: FIQVLCARQHLLGKK*ARYCGGWHGEGRAS
Trigger: GCTCGCCCTACCCTCTCCATGCCATCCACCACAGTACCTTGCCCACTTCTTGCCTAACAGGTGTTGCCTGGCACAGAGGACTTGAATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 90 bp CTCTTCTTGCTCATCCAGAAGCTCTCTTTCCTCCTCCCGGGAGGATaGTGGACTCAAGTGCTTCTTCAGGGACACTGTCTCCTAGTCCCT +
Preference number: 1 (lower is better)
Translates to: LFLLIQKLSFLLPGG*WTQVLLQGHCLLVP
Trigger: AGGGACTAGGAGACAGTGTCCCTGAAGAAGCACTTGAGTCCAGCATCCTCCCGGGAGGAGGAAAGAGAGCTTCTGGATGAGCAAGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 90 bp CGAGGTCAGTGCCTGGACACCGTGAGCACCAGCATGCATTCCCCGTaGGTTAATGGAGATACCAGGCAAGTAGAAGATTCACAGTATCAC +
Preference number: 1 (lower is better)
Translates to: RGQCLDTVSTSMHSP*VNGDTRQVEDSQYH
Trigger: GTGATACTGTGAATCTTCTACTTGCCTGGTATCTCCATTAACCCACGGGGAATGCATGCTGGTGCTCACGGTGTCCAGGCACTGACCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR TCA 90 bp GGCAAGTGTTCGGCCATTTATTCTAAGCCACAGAGGCCACTGCTCTaGGACCCGTCCATTGGAAATGGCTACACATACATGAGAGGCTGG +
Preference number: 1 (lower is better)
Translates to: GKCSAIYSKPQRPLL*DPSIGNGYTYMRGW
Trigger: CCAGCCTCTCATGTATGTGTAGCCATTTCCAATGGACGGGTCTCAGAGCAGTGGCCTCTGTGGCTTAGAATAAATGGCCGAACACTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 90 bp CAGCCTTCAGATAAAGATGTAGAACTCTCAGCTCCTCCTGTACCATaGCTGCCTGGATGCTGCCATGTTGCTGCCTGGATGGTAATGGAC +
Preference number: 1 (lower is better)
Translates to: QPSDKDVELSAPPVP*LPGCCHVAAWMVMD
Trigger: GTCCATTACCATCCAGGCAGCAACATGGCAGCATCCAGGCAGGCATGGTACAGGAGGAGCTGAGAGTTCTACATCTTTATCTGAAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 90 bp GGCACAGAGCACAGCAGCTGCAGAGGAGTATGGCCAGAACCACCATaGAGTGACCCATTCCAGCTTCTAACTTTAGGCTTACAGCATACT +
Preference number: 1 (lower is better)
Translates to: GTEHSSCRGVWPEPP*SDPFQLLTLGLQHT
Trigger: AGTATGCTGTAAGCCTAAAGTTAGAAGCTGGAATGGGTCACTCCATGGTGGTTCTGGCCATACTCCTCTGCAGCTGCTGTGCTCTGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR TCA 90 bp TGCCTGCCTGGATGCTGCCATGTTGCTGCCTGGATGGTAATGGACTaGACCTCTGAACCTGTAAGCCAGTCCCAATTAAATGTTGTCCTT +
Preference number: 1 (lower is better)
Translates to: CLPGCCHVAAWMVMD*TSEPVSQSQLNVVL
Trigger: AAGGACAACATTTAATTGGGACTGGCTTACAGGTTCAGAGGTTCAGTCCATTACCATCCAGGCAGCAACATGGCAGCATCCAGGCAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 90 bp CAGAACAAAACTAACAGGAGGACTGCATTTCATTCAAGTCCTCTGTaGCAGGCAACACCTGTTAGGCAAGAAGTGGGCAAGGTACTGTGG +
Preference number: 1 (lower is better)
Translates to: QNKTNRRTAFHSSPL*QATPVRQEVGKVLW
Trigger: CCACAGTACCTTGCCCACTTCTTGCCTAACAGGTGTTGCCTGGCACAGAGGACTTGAATGAAATGCAGTCCTCCTGTTAGTTTTGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 90 bp TGTCAAATGTGCTCAACAGTATTAAACCTGAGTCCAGAGACTTCCTaGCCAGGCAAAAGTGCTGCCCTTCTGCCTACTCACAATGCCACT +
Preference number: 1 (lower is better)
Translates to: CQMCSTVLNLSPETS*PGKSAALLPTHNAT
Trigger: AGTGGCATTGTGAGTAGGCAGAAGGGCAGCACTTTTGCCTGGGCAGGAAGTCTCTGGACTCAGGTTTAATACTGTTGAGCACATTTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 90 bp ATTGGAAATGGCTACACATACATGAGAGGCTGGAGGGCGGTACAATaGGAAAACAGGAGAAACATTCACAGCGCTATGCAGCAGTTGCAC +
Preference number: 1 (lower is better)
Translates to: IGNGYTYMRGWRAVQ*ENRRNIHSAMQQLH
Trigger: GTGCAACTGCTGCATAGCGCTGTGAATGTTTCTCCTGTTTTCCCATTGTACCGCCCTCCAGCCTCTCATGTATGTGTAGCCATTTCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR TCA 90 bp TGGGAAGGGGTGTCGGCATACAGATCAGTGGTACCACCCACCTTCTaGTGTAACATGTTCCCACTCATAACCAAGAGTTTGTCAAATGTG +
Preference number: 1 (lower is better)
Translates to: WEGVSAYRSVVPPTF*CNMFPLITKSLSNV
Trigger: CACATTTGACAAACTCTTGGTTATGAGTGGGAACATGTTACATCAGAAGGTGGGTGGTACCACTGATCTGTATGCCGACACCCCTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 90 bp TGCAGAGCTGGTTTTCTGATACATAATTTCCCATCACTAGCCACATaGGTAAGGAGAGAGGAAAGGGCAGAGCCATGGAAACCTTGGTCA +
Preference number: 1 (lower is better)
Translates to: CRAGFLIHNFPSLAT*VRREERAEPWKPWS
Trigger: TGACCAAGGTTTCCATGGCTCTGCCCTTTCCTCTCTCCTTACCCATGTGGCTAGTGATGGGAAATTATGTATCAGAAAACCAGCTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR TCA 90 bp TGGATGCTGCCATGTTGCTGCCTGGATGGTAATGGACTGAACCTCTaGACCTGTAAGCCAGTCCCAATTAAATGTTGTCCTTATAAGAGT +
Preference number: 1 (lower is better)
Translates to: WMLPCCCLDGNGLNL*TCKPVPIKCCPYKS
Trigger: ACTCTTATAAGGACAACATTTAATTGGGACTGGCTTACAGGTTCAGAGGTTCAGTCCATTACCATCCAGGCAGCAACATGGCAGCATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 90 bp AGTCTGAGCTTCCCCAATAGTGCATTTCCATTCCTTGGGCAGTCATaGTCCAGCTCAGACAGACTTACTTCTATTACTGATTTACAACAC +
Preference number: 1 (lower is better)
Translates to: SLSFPNSAFPFLGQS*SSSDRLTSITDLQH
Trigger: GTGTTGTAAATCAGTAATAGAAGTAAGTCTGTCTGAGCTGGAGCATGACTGCCCAAGGAATGGAAATGCACTATTGGGGAAGCTCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 90 bp GAGGCAATGCCATGTAGAAAGATGCACCTCCAAGGCACTTCCTTCTaGAACACAGACATTTCTGTTTGTCTTTCATGTTATGAACGAAGG +
Preference number: 1 (lower is better)
Translates to: EAMPCRKMHLQGTSF*NTDISVCLSCYERR
Trigger: CCTTCGTTCATAACATGAAAGACAAACAGAAATGTCTGTGTTCCAGAAGGAAGTGCCTTGGAGGTGCATCTTTCTACATGGCATTGCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 90 bp AGACAGAAGCTCACACAGAACAACGGTAATTGCATGTTAGTGGTTTaGTCCATACTTCACACTGACATATGCTATAAACGAAAGGCTGTG +
Preference number: 1 (lower is better)
Translates to: RQKLTQNNGNCMLVV*SILHTDICYKRKAV
Trigger: CACAGCCTTTCGTTTATAGCATATGTCAGTGTGAAGTATGGACCAAACCACTAACATGCAATTACCGTTGTTCTGTGTGAGCTTCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 90 bp CCCAAGAATGGTGATTATTACTTCTTCTGTGAAGAGAAGCAACGATaGCAGGAAAGGAACTGCTTCTCTAGGAACAGAACAAAACTAACA +
Preference number: 1 (lower is better)
Translates to: PKNGDYYFFCEEKQR*QERNCFSRNRTKLT
Trigger: TGTTAGTTTTGTTCTGTTCCTAGAGAAGCAGTTCCTTTCCTGGCATCGTTGCTTCTCTTCACAGAAGAAGTAATAATCACCATTCTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR TCA 90 bp GCAACTTGCCAAGTGGCTATAGATCCTAGCATCCAACCACACCATTaGTCTTTGAATATTTTACCTCTAATTCCCTTTTCAAAGCTCTGT +
Preference number: 1 (lower is better)
Translates to: ATCQVAIDPSIQPHH*SLNILPLIPFSKLC
Trigger: ACAGAGCTTTGAAAAGGGAATTAGAGGTAAAATATTCAAAGATCAATGGTGTGGTTGGATGCTAGGATCTATAGCCACTTGGCAAGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 90 bp GATACAAAATTTCAAGTACTTATTCTAAAACCATTGTTGCTATGGTaGAGACAGCCAGGTGGCTCACTAAATGCTTTCCCTTGGAAACAC +
Preference number: 1 (lower is better)
Translates to: DTKFQVLILKPLLLW*RQPGGSLNAFPWKH
Trigger: GTGTTTCCAAGGGAAAGCATTTAGTGAGCCACCTGGCTGTCTCCACCATAGCAACAATGGTTTTAGAATAAGTACTTGAAATTTTGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 90 bp AGTGATACAAAATTTCAAGTACTTATTCTAAAACCATTGTTGCTATaGTGGAGACAGCCAGGTGGCTCACTAAATGCTTTCCCTTGGAAA +
Preference number: 1 (lower is better)
Translates to: SDTKFQVLILKPLLL*WRQPGGSLNAFPWK
Trigger: TTTCCAAGGGAAAGCATTTAGTGAGCCACCTGGCTGTCTCCACCATAGCAACAATGGTTTTAGAATAAGTACTTGAAATTTTGTATCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CAA 90 bp CAGTGGCGGAGGACCCACACTCGCTGGGAGCCTCGGTCTCTCTTCTaGCTCATCCAGAAGCTCTCTTTCCTCCTCCCGGGAGGATGCTGG +
Preference number: 2 (lower is better)
Translates to: QWRRTHTRWEPRSLF*LIQKLSFLLPGGCW
Trigger: CCAGCATCCTCCCGGGAGGAGGAAAGAGAGCTTCTGGATGAGCAAGAAGAGAGACCGAGGCTCCCAGCGAGTGTGGGTCCTCCGCCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR TCA 90 bp GAACTCTCAGCTCCTCCTGTACCATGCCTGCCTGGATGCTGCCATGTTGCTGCCAGGGGTGTGGCTGTGTaGGGTGCACACCAGGCCTTC +
Preference number: 2 (lower is better)
Translates to: ELSAPPVPCLPGCCHVAARGVAV*GAHQAF
Trigger: GAAGGCCTGGTGTGCACCTCACACAGCCACACCCCT...GGCAGCAACATGGCAGCATCCAGGCAGGCATGGTACAGGAGGAGCTGAGAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR TCA 90 bp GAACTCTCAGCTCCTCCTGTACCATGCCTGCCTGGATGCTGCCATGTTGCTGCCGACCTGTGTCCTGGCTaGTGGTCAGCAGAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: ELSAPPVPCLPGCCHVAADLCPG*WSAEAA
Trigger: AGCAGCCTCTGCTGACCATCAGCCAGGACACAGGTC...GGCAGCAACATGGCAGCATCCAGGCAGGCATGGTACAGGAGGAGCTGAGAGTTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR GCA 90 bp GTGGGGACTAATGTGGGAAGGGGTGTCGGCATACAGATCAGTGGTACCACCCACACCAGGCCTTCCCAGTaGCAGAGAGCAGAAGCGGCT +
Preference number: 2 (lower is better)
Translates to: VGTNVGRGVGIQISGTTHTRPSQ*QRAEAA
Trigger: AGCCGCTTCTGCTCTCTGGCACTGGGAAGGCCTGGT...GTGGGTGGTACCACTGATCTGTATGCCGACACCCCTTCCCACATTAGTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR CCA 90 bp GTGCACACCAGGCCTTCCCAGTGCCAGAGAGCAGAAGCGGCTTGTCCTAGGAAGCTCCCGGGAGGATGCTaGACTCAAGTGCTTCTTCAG +
Preference number: 2 (lower is better)
Translates to: VHTRPSQCQRAEAACPRKLPGGC*TQVLLQ
Trigger: CTGAAGAAGCACTTGAGTCCAGCATCCTCCCGGGAG...CTTCCTAGGACAAGCCGCTTCTGCTCTCTGGCACTGGGAAGGCCTGGTGTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR GCA 90 bp TGCAGCCAGCCACCAGGGGTGTGGCTGTGTGAGGTGCACACCAGGCCTTCCCAGTGCCAGGAAAGGAACTaGTTCTCTAGGAACAGAACA +
Preference number: 2 (lower is better)
Translates to: CSQPPGVWLCEVHTRPSQCQERN*FSRNRT
Trigger: TGTTCTGTTCCTAGAGAAGCAGTTCCTTTCCTGGCA...CTGGGAAGGCCTGGTGTGCACCTCACACAGCCACACCCCTGGTGGCTGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR TCA 90 bp GTGGGGACTAATGTGGGAAGGGGTGTCGGCATACAGATCAGTGGTACCACCCACGCCGTAGCTGGGATATaGCCAGCATGGTATGTAGGG +
Preference number: 2 (lower is better)
Translates to: VGTNVGRGVGIQISGTTHAVAGI*PAWYVG
Trigger: CCCTACATACCATGCTGGTCATATCCCAGCTACGGC...GTGGGTGGTACCACTGATCTGTATGCCGACACCCCTTCCCACATTAGTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR CCA 90 bp GAACTCTCAGCTCCTCCTGTACCATGCCTGCCTGGATGCTGCCATGTTGCTGCCCCATTGTTGCTATGGTaGAGACAGCCAGGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: ELSAPPVPCLPGCCHVAAPLLLW*RQPGGS
Trigger: TGAGCCACCTGGCTGTCTCCACCATAGCAACAATGG...GGCAGCAACATGGCAGCATCCAGGCAGGCATGGTACAGGAGGAGCTGAGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR TCA 90 bp GTGCACACCAGGCCTTCCCAGTGCCAGAGAGCAGAAGCGGCTTGTCCTAGGAAGTCGAAAGACTCTCACTaGATTCTGAGATGCAGGCAC +
Preference number: 2 (lower is better)
Translates to: VHTRPSQCQRAEAACPRKSKDSH*ILRCRH
Trigger: GTGCCTGCATCTCAGAATTCAGTGAGAGTCTTTCGA...CTTCCTAGGACAAGCCGCTTCTGCTCTCTGGCACTGGGAAGGCCTGGTGTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR GCA 90 bp GAGAGGAAAGGGCAGAGCCATGGAAACCTTGGTCAATCTGTGGTAGGCACCCATTGTGGCTGTGTGAGGTaGACACCAGGCCTTCCCAGT +
Preference number: 2 (lower is better)
Translates to: ERKGQSHGNLGQSVVGTHCGCVR*TPGLPS
Trigger: ACTGGGAAGGCCTGGTGTGCACCTCACACAGCCACA...ATGGGTGCCTACCACAGATTGACCAAGGTTTCCATGGCTCTGCCCTTTCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR GCA 90 bp GAGAGGAAAGGGCAGAGCCATGGAAACCTTGGTCAATCTGTGGTAGGCACCCATGTTCTGCTCTCACATTaGAGCCAGCCACCAGGGGTG +
Preference number: 2 (lower is better)
Translates to: ERKGQSHGNLGQSVVGTHVLLSH*SQPPGV
Trigger: CACCCCTGGTGGCTGGCTGCAATGTGAGAGCAGAAC...ATGGGTGCCTACCACAGATTGACCAAGGTTTCCATGGCTCTGCCCTTTCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR CCA 90 bp GAACTCTCAGCTCCTCCTGTACCATGCCTGCCTGGATGCTGCCATGTTGCTGCCAAACCATTGTTGCTATaGTGGAGACAGCCAGGTGGC +
Preference number: 2 (lower is better)
Translates to: ELSAPPVPCLPGCCHVAAKPLLL*WRQPGG
Trigger: GCCACCTGGCTGTCTCCACCATAGCAACAATGGTTT...GGCAGCAACATGGCAGCATCCAGGCAGGCATGGTACAGGAGGAGCTGAGAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR CCA 90 bp GAACTCTCAGCTCCTCCTGTACCATGCCTGCCTGGATGCTGCCATGTTGCTGCCCAGCTCTGTGATTGGTaGTCGTGTGCATTAGTCCTG +
Preference number: 2 (lower is better)
Translates to: ELSAPPVPCLPGCCHVAAQLCDW*SCALVL
Trigger: CAGGACTAATGCACACGACCACCAATCACAGAGCTG...GGCAGCAACATGGCAGCATCCAGGCAGGCATGGTACAGGAGGAGCTGAGAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR TCA 90 bp GTGCACACCAGGCCTTCCCAGTGCCAGAGAGCAGAAGCGGCTTGTCCTAGGAAGTCTTATCCCAAGCCATaGAAGAGAAACACGGCACAA +
Preference number: 2 (lower is better)
Translates to: VHTRPSQCQRAEAACPRKSYPKP*KRNTAQ
Trigger: TTGTGCCGTGTTTCTCTTTCATGGCTTGGGATAAGA...CTTCCTAGGACAAGCCGCTTCTGCTCTCTGGCACTGGGAAGGCCTGGTGTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR GCA 90 bp GTGAGGTGCACACCAGGCCTTCCCAGTGCCAGAGAGCAGAAGCGGCTTGTCCTACACATACAGAGGCAATaGCATGTAGAAAGATGCACC +
Preference number: 2 (lower is better)
Translates to: VRCTPGLPSAREQKRLVLHIQRQ*HVERCT
Trigger: GGTGCATCTTTCTACATGGCATTGCCTCTGTATGTG...TAGGACAAGCCGCTTCTGCTCTCTGGCACTGGGAAGGCCTGGTGTGCACCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR CCA 90 bp CGGACCAGGTTAAATCACAGTGGTGATGACGCCCTGGAGAGAGTTCTGCTCTCATGTGATCATCCTCTGTaGCAAGAGGCAAGCGAGGCC +
Preference number: 2 (lower is better)
Translates to: RTRLNHSGDDALERVLLSCDHPL*QEASEA
Trigger: GGCCTCGCTTGCCTCTTGCCACAGAGGATGATCACA...TGAGAGCAGAACTCTCTCCAGGGCGTCATCACCACTGTGATTTAACCTGGTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR CCA 90 bp GAGAGGAAAGGGCAGAGCCATGGAAACCTTGGTCAATCTGTGGTAGGCACCCATAGGGCTTGGAGAGGCTaGCCAATTTCTGGACACAGG +
Preference number: 2 (lower is better)
Translates to: ERKGQSHGNLGQSVVGTHRAWRG*PISGHR
Trigger: CCTGTGTCCAGAAATTGGCCAGCCTCTCCAAGCCCT...ATGGGTGCCTACCACAGATTGACCAAGGTTTCCATGGCTCTGCCCTTTCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR GCA 90 bp CGGACCAGGTTAAATCACAGTGGTGATGACGCCCTGGAGAGAGTTCTGCTCTCAGATGCTGGACTCAAGTaGTTCTTCAGGGACACTGTC +
Preference number: 2 (lower is better)
Translates to: RTRLNHSGDDALERVLLSDAGLK*FFRDTV
Trigger: GACAGTGTCCCTGAAGAAGCACTTGAGTCCAGCATC...TGAGAGCAGAACTCTCTCCAGGGCGTCATCACCACTGTGATTTAACCTGGTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR CCA 90 bp CGGACCAGGTTAAATCACAGTGGTGATGACGCCCTGGAGAGAGTTCTGCTCTCAAGTCCTGGGAGGGAATaGCTTTCACTAGATTGCGGT +
Preference number: 2 (lower is better)
Translates to: RTRLNHSGDDALERVLLSSPGRE*LSLDCG
Trigger: ACCGCAATCTAGTGAAAGCCATTCCCTCCCAGGACT...TGAGAGCAGAACTCTCTCCAGGGCGTCATCACCACTGTGATTTAACCTGGTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR CCA 90 bp CGGACCAGGTTAAATCACAGTGGTGATGACGCCCTGGAGAGAGTTCTGCTCTCACAAGAGGCCAGCTGTTaGACACGCATGGTTTTCCAA +
Preference number: 2 (lower is better)
Translates to: RTRLNHSGDDALERVLLSQEASC*TRMVFQ
Trigger: TTGGAAAACCATGCGTGTCCAACAGCTGGCCTCTTG...TGAGAGCAGAACTCTCTCCAGGGCGTCATCACCACTGTGATTTAACCTGGTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR CCA 90 bp CGGACCAGGTTAAATCACAGTGGTGATGACGCCCTGGAGAGAGTTCTGCTCTCACTGTTAGGCAAGAAGTaGGCAAGGTACTGTGGTGGA +
Preference number: 2 (lower is better)
Translates to: RTRLNHSGDDALERVLLSLLGKK*ARYCGG
Trigger: TCCACCACAGTACCTTGCCCACTTCTTGCCTAACAG...TGAGAGCAGAACTCTCTCCAGGGCGTCATCACCACTGTGATTTAACCTGGTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR TCA 90 bp GCTAAGAAGGCGATGCCTCTCATCACGATGACAAATACCATAGGCCCAGACCAAACTCTCACTGAATTCTaGGATGCAGGCACTGCAGGG +
Preference number: 2 (lower is better)
Translates to: AKKAMPLITMTNTIGPDQTLTEF*DAGTAG
Trigger: CCCTGCAGTGCCTGCATCTCAGAATTCAGTGAGAGT...TTGGTCTGGGCCTATGGTATTTGTCATCGTGATGAGAGGCATCGCCTTCTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR TCA 90 bp GTGAGGTGCACACCAGGCCTTCCCAGTGCCAGAGAGCAGAAGCGGCTTGTCCTATTGTCTTTCATGTTATaGACGAAGGAAAGTTGCCAA +
Preference number: 2 (lower is better)
Translates to: VRCTPGLPSAREQKRLVLLSFML*TKESCQ
Trigger: TTGGCAACTTTCCTTCGTTCATAACATGAAAGACAA...TAGGACAAGCCGCTTCTGCTCTCTGGCACTGGGAAGGCCTGGTGTGCACCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR GCA 90 bp GCTAAGAAGGCGATGCCTCTCATCACGATGACAAATACCATAGGCCCAGACCAACCCAGGCAAAAGTGCTaGCCTTCTGCCTACTCACAA +
Preference number: 2 (lower is better)
Translates to: AKKAMPLITMTNTIGPDQPRQKC*PSAYSQ
Trigger: TTGTGAGTAGGCAGAAGGGCAGCACTTTTGCCTGGG...TTGGTCTGGGCCTATGGTATTTGTCATCGTGATGAGAGGCATCGCCTTCTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR TCA 90 bp GCTAAGAAGGCGATGCCTCTCATCACGATGACAAATACCATAGGCCCAGACCAAACACGGCACAAACTGTaGTCATCCTCTGTGGCAAGA +
Preference number: 2 (lower is better)
Translates to: AKKAMPLITMTNTIGPDQTRHKL*SSSVAR
Trigger: TCTTGCCACAGAGGATGATCACAGTTTGTGCCGTGT...TTGGTCTGGGCCTATGGTATTTGTCATCGTGATGAGAGGCATCGCCTTCTTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR CCA 90 bp AAGACTTTGAAAAGGTCGTGGCATGGGAAATACAAGGGAGGACCCATGCAGGCAACGACTGAAGAGTCCTaGGAGGGAATGGCTTTCACT +
Preference number: 2 (lower is better)
Translates to: KTLKRSWHGKYKGGPMQATTEES*EGMAFT
Trigger: AGTGAAAGCCATTCCCTCCCAGGACTCTTCAGTCGT...TGCCTGCATGGGTCCTCCCTTGTATTTCCCATGCCACGACCTTTTCAAAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR CCA 90 bp CTGTTAGGCAAGAAGTGGGCAAGGTACTGTGGTGGATGGCATGGAGAGGGTAGGCAAGGCACTTCCTTCTaGAACACAGACATTTCTGTT +
Preference number: 2 (lower is better)
Translates to: LLGKKWARYCGGWHGEGRQGTSF*NTDISV
Trigger: AACAGAAATGTCTGTGTTCCAGAAGGAAGTGCCTTG...CCTACCCTCTCCATGCCATCCACCACAGTACCTTGCCCACTTCTTGCCTAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR CCA 90 bp GAACTCTCAGCTCCTCCTGTACCATGCCTGCCTGGATGCTGCCATGTTGCTGCCACTGATTATTCCCTTTaGAGGATTCTGTTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: ELSAPPVPCLPGCCHVAATDYSL*RILLLS
Trigger: AGAAAGCAACAGAATCCTCCAAAGGGAATAATCAGT...GGCAGCAACATGGCAGCATCCAGGCAGGCATGGTACAGGAGGAGCTGAGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR CCA 90 bp CAGTCATGCTCCAGCTCAGACAGACTTACTTCTATTACTGATTTACAACACACACAGCCACCAGGGGTGTaGCTGTGTGAGGTGCACACC +
Preference number: 2 (lower is better)
Translates to: QSCSSSDRLTSITDLQHTQPPGV*LCEVHT
Trigger: GGTGTGCACCTCACACAGCCACACCCCTGGTGGCTG...TGTGTGTTGTAAATCAGTAATAGAAGTAAGTCTGTCTGAGCTGGAGCATGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR GCA 90 bp AAGACTTTGAAAAGGTCGTGGCATGGGAAATACAAGGGAGGACCCATGCAGGCAGAAGAGAAGCAACGATaGCAGGAAAGGAACTGCTTC +
Preference number: 2 (lower is better)
Translates to: KTLKRSWHGKYKGGPMQAEEKQR*QERNCF
Trigger: GAAGCAGTTCCTTTCCTGGCATCGTTGCTTCTCTTC...TGCCTGCATGGGTCCTCCCTTGTATTTCCCATGCCACGACCTTTTCAAAGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR GCA 90 bp AGGGCGGTACAATGGGAAAACAGGAGAAACATTCACAGCGCTATGCAGCAGTTGCAACACACAGTTCTCTaGAACTTGCCAAGTGGCTAT +
Preference number: 2 (lower is better)
Translates to: RAVQWENRRNIHSAMQQLQHTVL*NLPSGY
Trigger: ATAGCCACTTGGCAAGTTGCAGAGAACTGTGTGTTG...CAACTGCTGCATAGCGCTGTGAATGTTTCTCCTGTTTTCCCATTGTACCGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CAA 90 bp GAGAAGGACTGTCTGTACATGCTGAGGCAAGAACGAGGAGACCGCTaGACGAGAACGCAATACCTTCAACAGATGTTTCTCTCTTTTTCT +
Preference number: 2 (lower is better)
Translates to: EKDCLYMLRQERGDR*TRTQYLQQMFLSFS
Trigger: AGAAAAAGAGAGAAACATCTGTTGAAGGTATTGCGTTCTCGTCAAGCGGTCTCCTCGTTCTTGCCTCAGCATGTACAGACAGTCCTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CAA 90 bp GTTGCTATGGTGGAGACAGCCAGGTGGCTCACTAAATGCTTTCCCTaGGAAACACTAAGACTGAAAGATGCTCTTCATTCACCAAGTAGG +
Preference number: 2 (lower is better)
Translates to: VAMVETARWLTKCFP*ETLRLKDALHSPSR
Trigger: CCTACTTGGTGAATGAAGAGCATCTTTCAGTCTTAGTGTTTCCAAGGGAAAGCATTTAGTGAGCCACCTGGCTGTCTCCACCATAGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR GCA 90 bp AGAAACGAGAAGGACTGTCTGTACATGCTGAGGCAAGAACGAGGAGACCGCTTGACTCAAAATAATGAATaGAGCACAGCCAGGCTGTAT +
Preference number: 2 (lower is better)
Translates to: RNEKDCLYMLRQERGDRLTQNNE*STARLY
Trigger: ATACAGCCTGGCTGTGCTGCATTCATTATTTTGAGT...CAAGCGGTCTCCTCGTTCTTGCCTCAGCATGTACAGACAGTCCTTCTCGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR GCA 90 bp GAGAGGAAAGGGCAGAGCCATGGAAACCTTGGTCAATCTGTGGTAGGCACCCATTTTGGAGGATTCTGTTaGTTTCTTAGTACCTCTGTT +
Preference number: 2 (lower is better)
Translates to: ERKGQSHGNLGQSVVGTHFGGFC*FLSTSV
Trigger: AACAGAGGTACTAAGAAAGCAACAGAATCCTCCAAA...ATGGGTGCCTACCACAGATTGACCAAGGTTTCCATGGCTCTGCCCTTTCCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 72 bp ATTGCAGCCAGCCACCAGGGGTGTGGCTGTGTGAGGTaGACACCAGGCCTTCCCAGTGCCAGAGAGCAGAAG +
Preference number: 3 (lower is better)
Translates to: IAASHQGCGCVR*TPGLPSAREQK
Trigger: CTTCTGCTCTCTGGCACTGGGAAGGCCTGGTGTGCACCTCACACAGCCACACCCCTGGTGGCTGGCTGCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 72 bp GTTCTGCTCTCACATTGCAGCCAGCCACCAGGGGTGTaGCTGTGTGAGGTGCACACCAGGCCTTCCCAGTGC +
Preference number: 3 (lower is better)
Translates to: VLLSHCSQPPGV*LCEVHTRPSQC
Trigger: GCACTGGGAAGGCCTGGTGTGCACCTCACACAGCCACACCCCTGGTGGCTGGCTGCAATGTGAGAGCAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 72 bp AAACGAGCCAAGCACTGTGCCAGCCCTCATGCCTGGTaGACGAGGTCAGTGCCTGGACACCGTGAGCACCAG +
Preference number: 3 (lower is better)
Translates to: KRAKHCASPHAW*TRSVPGHREHQ
Trigger: CTGGTGCTCACGGTGTCCAGGCACTGACCTCGTCCACCAGGCATGAGGGCTGGCACAGTGCTTGGCTCGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR CAA 90 bp TGCAGCCAGCCACCAGGGGTGTGGCTGTGTGAGGTGCACACCAGGCCTTCCCAGTCAAGAGGCCAGCTGTaGGACACGCATGGTTTTCCA +
Preference number: 3 (lower is better)
Translates to: CSQPPGVWLCEVHTRPSQSRGQL*DTHGFP
Trigger: TGGAAAACCATGCGTGTCCAACAGCTGGCCTCTTGA...CTGGGAAGGCCTGGTGTGCACCTCACACAGCCACACCCCTGGTGGCTGGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 72 bp GGACCCACACTCGCTGGGAGCCTCGGTCTCTCTTCTTaGTCATCCAGAAGCTCTCTTTCCTCCTCCCGGGAG +
Preference number: 3 (lower is better)
Translates to: GPTLAGSLGLSS*SSRSSLSSSRE
Trigger: CTCCCGGGAGGAGGAAAGAGAGCTTCTGGATGAGCAAGAAGAGAGACCGAGGCTCCCAGCGAGTGTGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 72 bp GTGTGGCTGTGTGAGGTGCACACCAGGCCTTCCCAGTaGCAGAGAGCAGAAGCGGCTTGTCCTAGGAAGCAC +
Preference number: 3 (lower is better)
Translates to: VWLCEVHTRPSQ*QRAEAACPRKH
Trigger: GTGCTTCCTAGGACAAGCCGCTTCTGCTCTCTGGCACTGGGAAGGCCTGGTGTGCACCTCACACAGCCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 72 bp GGTGATGACGCCCTGGAGAGAGTTCTGCTCTCACATTaGAGCCAGCCACCAGGGGTGTGGCTGTGTGAGGTG +
Preference number: 3 (lower is better)
Translates to: GDDALERVLLSH*SQPPGVWLCEV
Trigger: CACCTCACACAGCCACACCCCTGGTGGCTGGCTGCAATGTGAGAGCAGAACTCTCTCCAGGGCGTCATCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 72 bp CAGAGCAGAGCTGCAAGGGACTTCCGACAATGTACCTaGTCCCTCCAGGTGACTCAAGAGGCCAGCTGTTGG +
Preference number: 3 (lower is better)
Translates to: QSRAARDFRQCT*SLQVTQEASCW
Trigger: CCAACAGCTGGCCTCTTGAGTCACCTGGAGGGAGCAGGTACATTGTCGGAAGTCCCTTGCAGCTCTGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 72 bp CATTTAGAAGGCCAGGGTCTTGTTGGTGGGCCTGGTTaGTGGAGTCCAGTGGCACAGAGCACAGCAGCTGCA +
Preference number: 3 (lower is better)
Translates to: HLEGQGLVGGPG*WSPVAQSTAAA
Trigger: TGCAGCTGCTGTGCTCTGTGCCACTGGACTCCACCAACCAGGCCCACCAACAAGACCCTGGCCTTCTAAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 72 bp GTACCTGGTGACAATACAGCAAGGGGTAGGCACCACTaGAGGGCTAACAGCTCCCCCGCTGTCCAGTTAGTA +
Preference number: 3 (lower is better)
Translates to: VPGDNTARGRHH*RANSSPAVQLV
Trigger: TACTAACTGGACAGCGGGGGAGCTGTTAGCCCTGCAGTGGTGCCTACCCCTTGCTGTATTGTCACCAGGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 72 bp GATGGTCAGCAGAGGCTGCTGCAGCATTTTCTAGTGTaGATGGCAGAGAACGCCAGAGCAGAGCTGCAAGGG +
Preference number: 3 (lower is better)
Translates to: DGQQRLLQHFLV*MAENARAELQG
Trigger: CCCTTGCAGCTCTGCTCTGGCGTTCTCTGCCATCCACACTAGAAAATGCTGCAGCAGCCTCTGCTGACCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 72 bp GTCCTCTGTGCCAGGCAACACCTGTTAGGCAAGAAGTaGGCAAGGTACTGTGGTGGATGGCATGGAGAGGGT +
Preference number: 3 (lower is better)
Translates to: VLCARQHLLGKK*ARYCGGWHGEG
Trigger: ACCCTCTCCATGCCATCCACCACAGTACCTTGCCCACTTCTTGCCTAACAGGTGTTGCCTGGCACAGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 72 bp CACCTCATCACATTTAGAAGGCCAGGGTCTTGTTGGTaGGCCTGGTTGGTGGAGTCCAGTGGCACAGAGCAC +
Preference number: 3 (lower is better)
Translates to: HLITFRRPGSCW*AWLVESSGTEH
Trigger: GTGCTCTGTGCCACTGGACTCCACCAACCAGGCCCACCAACAAGACCCTGGCCTTCTAAATGTGATGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 72 bp GACCACCTCATCACATTTAGAAGGCCAGGGTCTTGTTaGTGGGCCTGGTTGGTGGAGTCCAGTGGCACAGAG +
Preference number: 3 (lower is better)
Translates to: DHLITFRRPGSC*WAWLVESSGTE
Trigger: CTCTGTGCCACTGGACTCCACCAACCAGGCCCACCAACAAGACCCTGGCCTTCTAAATGTGATGAGGTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR TCA 72 bp CAAGGGACTTCCGACAATGTACCTGCTCCCTCCAGGTaGCTCAAGAGGCCAGCTGTTGGACACGCATGGTTT +
Preference number: 3 (lower is better)
Translates to: QGTSDNVPAPSR*LKRPAVGHAWF
Trigger: AAACCATGCGTGTCCAACAGCTGGCCTCTTGAGTCACCTGGAGGGAGCAGGTACATTGTCGGAAGTCCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 72 bp CTCATCCAGAAGCTCTCTTTCCTCCTCCCGGGAGGATaGTGGACTCAAGTGCTTCTTCAGGGACACTGTCTC +
Preference number: 3 (lower is better)
Translates to: LIQKLSFLLPGG*WTQVLLQGHCL
Trigger: GAGACAGTGTCCCTGAAGAAGCACTTGAGTCCAGCATCCTCCCGGGAGGAGGAAAGAGAGCTTCTGGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 72 bp AAAGGTCGTGGCATGGGAAATACAAGGGAGGACCCATaGAGGCAACAGACACTGCTGTCTGAGCTAGCCTCG +
Preference number: 3 (lower is better)
Translates to: KGRGMGNTREDP*RQQTLLSELAS
Trigger: CGAGGCTAGCTCAGACAGCAGTGTCTGTTGCCTGCATGGGTCCTCCCTTGTATTTCCCATGCCACGACCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 72 bp TCATCCTCTGTGGCAAGAGGCAAGCGAGGCCGGTGGTaGAAGTCTCGAGAAACGAGAAGGACTGTCTGTACA +
Preference number: 3 (lower is better)
Translates to: SSSVARGKRGRW*KSRETRRTVCT
Trigger: TGTACAGACAGTCCTTCTCGTTTCTCGAGACTTCCACCACCGGCCTCGCTTGCCTCTTGCCACAGAGGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 72 bp ACCTGCTCCCTCCAGGTGACTCAAGAGGCCAGCTGTTaGACACGCATGGTTTTCCAACTCTTATCCCAAGCC +
Preference number: 3 (lower is better)
Translates to: TCSLQVTQEASC*TRMVFQLLSQA
Trigger: GGCTTGGGATAAGAGTTGGAAAACCATGCGTGTCCAACAGCTGGCCTCTTGAGTCACCTGGAGGGAGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 72 bp ACAGAGGCCACTGCTCTGAGACCCGTCCATTGGAAATaGCTACACATACATGAGAGGCTGGAGGGCGGTACA +
Preference number: 3 (lower is better)
Translates to: TEATALRPVHWK*LHIHERLEGGT
Trigger: TGTACCGCCCTCCAGCCTCTCATGTATGTGTAGCCATTTCCAATGGACGGGTCTCAGAGCAGTGGCCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 72 bp ATCCAGAAGCTCTCTTTCCTCCTCCCGGGAGGATGCTaGACTCAAGTGCTTCTTCAGGGACACTGTCTCCTA +
Preference number: 3 (lower is better)
Translates to: IQKLSFLLPGGC*TQVLLQGHCLL
Trigger: TAGGAGACAGTGTCCCTGAAGAAGCACTTGAGTCCAGCATCCTCCCGGGAGGAGGAAAGAGAGCTTCTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR TCA 72 bp GCTAGCCTCGAGGCTTTTGGTGGAAACATTAAAAGGTaGAAGCGCAGACCTAAAGCCCTGAGGCCTGGTGTG +
Preference number: 3 (lower is better)
Translates to: ASLEAFGGNIKR*KRRPKALRPGV
Trigger: CACACCAGGCCTCAGGGCTTTAGGTCTGCGCTTTCACCTTTTAATGTTTCCACCAAAAGCCTCGAGGCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 72 bp GAACCTCGTCTGATCTGGCAGTGCAGTGTGTTCATGTaGCTAAGTGAGGTCAGCTCTGTGATTGGTGGTCGT +
Preference number: 3 (lower is better)
Translates to: EPRLIWQCSVFM*LSEVSSVIGGR
Trigger: ACGACCACCAATCACAGAGCTGACCTCACTTAGGCACATGAACACACTGCACTGCCAGATCAGACGAGGTTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 72 bp GATAAAGATGTAGAACTCTCAGCTCCTCCTGTACCATaGCTGCCTGGATGCTGCCATGTTGCTGCCTGGATG +
Preference number: 3 (lower is better)
Translates to: DKDVELSAPPVP*LPGCCHVAAWM
Trigger: CATCCAGGCAGCAACATGGCAGCATCCAGGCAGGCATGGTACAGGAGGAGCTGAGAGTTCTACATCTTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR CAA 90 bp GCTAAGAAGGCGATGCCTCTCATCACGATGACAAATACCATAGGCCCAGACCAAACTATGGTGAAGGGCTaGGAGAGGCTGGCCAATTTC +
Preference number: 3 (lower is better)
Translates to: AKKAMPLITMTNTIGPDQTMVKG*ERLANF
Trigger: GAAATTGGCCAGCCTCTCCAAGCCCTTCACCATAGT...TTGGTCTGGGCCTATGGTATTTGTCATCGTGATGAGAGGCATCGCCTTCTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 72 bp TGCTCAACAGTATTAAACCTGAGTCCAGAGACTTCCTaGCCAGGCAAAAGTGCTGCCCTTCTGCCTACTCAC +
Preference number: 3 (lower is better)
Translates to: CSTVLNLSPETS*PGKSAALLPTH
Trigger: GTGAGTAGGCAGAAGGGCAGCACTTTTGCCTGGGCAGGAAGTCTCTGGACTCAGGTTTAATACTGTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 72 bp GGCTACACATACATGAGAGGCTGGAGGGCGGTACAATaGGAAAACAGGAGAAACATTCACAGCGCTATGCAG +
Preference number: 3 (lower is better)
Translates to: GYTYMRGWRAVQ*ENRRNIHSAMQ
Trigger: CTGCATAGCGCTGTGAATGTTTCTCCTGTTTTCCCATTGTACCGCCCTCCAGCCTCTCATGTATGTGTAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR CAA 90 bp GAACTCTCAGCTCCTCCTGTACCATGCCTGCCTGGATGCTGCCATGTTGCTGCCCATCCAACCACACCATaGATCTTTGAATATTTTACC +
Preference number: 3 (lower is better)
Translates to: ELSAPPVPCLPGCCHVAAHPTTP*IFEYFT
Trigger: GGTAAAATATTCAAAGATCAATGGTGTGGTTGGATG...GGCAGCAACATGGCAGCATCCAGGCAGGCATGGTACAGGAGGAGCTGAGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR CAA 90 bp GAACTCTCAGCTCCTCCTGTACCATGCCTGCCTGGATGCTGCCATGTTGCTGCCCAAGTGCCATTATTCTaGAGTAGTTCTTTGAGAATG +
Preference number: 3 (lower is better)
Translates to: ELSAPPVPCLPGCCHVAAQVPLF*SSSLRM
Trigger: CATTCTCAAAGAACTACTCAAGAATAATGGCACTTG...GGCAGCAACATGGCAGCATCCAGGCAGGCATGGTACAGGAGGAGCTGAGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR TCA 72 bp TCTGATCTGGCAGTGCAGTGTGTTCATGTGCCTAAGTaGGGTCAGCTCTGTGATTGGTGGTCGTGTGCATTA +
Preference number: 3 (lower is better)
Translates to: SDLAVQCVHVPK*GQLCDWWSCAL
Trigger: TAATGCACACGACCACCAATCACAGAGCTGACCTCACTTAGGCACATGAACACACTGCACTGCCAGATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR TCA 72 bp TCGGCCATTTATTCTAAGCCACAGAGGCCACTGCTCTaGGACCCGTCCATTGGAAATGGCTACACATACATG +
Preference number: 3 (lower is better)
Translates to: SAIYSKPQRPLL*DPSIGNGYTYM
Trigger: CATGTATGTGTAGCCATTTCCAATGGACGGGTCTCAGAGCAGTGGCCTCTGTGGCTTAGAATAAATGGCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 72 bp AGTGTTCGGCCATTTATTCTAAGCCACAGAGGCCACTaGTCTGAGACCCGTCCATTGGAAATGGCTACACAT +
Preference number: 3 (lower is better)
Translates to: SVRPFILSHRGH*SETRPLEMATH
Trigger: ATGTGTAGCCATTTCCAATGGACGGGTCTCAGAGCAGTGGCCTCTGTGGCTTAGAATAAATGGCCGAACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR CAA 90 bp TTGGACACGCATGGTTTTCCAACTCTTATCCCAAGCCATGAAAGAGAAACACGGCCTCGGTCTCTCTTCTaGCTCATCCAGAAGCTCTCT +
Preference number: 3 (lower is better)
Translates to: LDTHGFPTLIPSHERETRPRSLF*LIQKLS
Trigger: AGAGAGCTTCTGGATGAGCAAGAAGAGAGACCGAGG...CCGTGTTTCTCTTTCATGGCTTGGGATAAGAGTTGGAAAACCATGCGTGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR-3UTR CAA 90 bp GTGGGGACTAATGTGGGAAGGGGTGTCGGCATACAGATCAGTGGTACCACCCACACTAAATGCTTTCCCTaGGAAACACTAAGACTGAAA +
Preference number: 3 (lower is better)
Translates to: VGTNVGRGVGIQISGTTHTKCFP*ETLRLK
Trigger: TTTCAGTCTTAGTGTTTCCAAGGGAAAGCATTTAGT...GTGGGTGGTACCACTGATCTGTATGCCGACACCCCTTCCCACATTAGTCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR TCA 72 bp AGTCACAGGTCTAGAGGGGACTGTAAGCACTGTGGTTaGATTGACACCTCACTCAGAGTTCTGACCACCTTT +
Preference number: 3 (lower is better)
Translates to: SHRSRGDCKHCG*IDTSLRVLTTF
Trigger: AAAGGTGGTCAGAACTCTGAGTGAGGTGTCAATTCAACCACAGTGCTTACAGTCCCCTCTAGACCTGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR TCA 72 bp GGATGCTGCCATGTTGCTGCCTGGATGGTAATGGACTaGACCTCTGAACCTGTAAGCCAGTCCCAATTAAAT +
Preference number: 3 (lower is better)
Translates to: GCCHVAAWMVMD*TSEPVSQSQLN
Trigger: ATTTAATTGGGACTGGCTTACAGGTTCAGAGGTTCAGTCCATTACCATCCAGGCAGCAACATGGCAGCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 72 bp CCGTCCATTGGAAATGGCTACACATACATGAGAGGCTaGAGGGCGGTACAATGGGAAAACAGGAGAAACATT +
Preference number: 3 (lower is better)
Translates to: PSIGNGYTYMRG*RAVQWENRRNI
Trigger: AATGTTTCTCCTGTTTTCCCATTGTACCGCCCTCCAGCCTCTCATGTATGTGTAGCCATTTCCAATGGACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR TCA 72 bp GTGTCGGCATACAGATCAGTGGTACCACCCACCTTCTaGTGTAACATGTTCCCACTCATAACCAAGAGTTTG +
Preference number: 3 (lower is better)
Translates to: VSAYRSVVPPTF*CNMFPLITKSL
Trigger: CAAACTCTTGGTTATGAGTGGGAACATGTTACATCAGAAGGTGGGTGGTACCACTGATCTGTATGCCGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR TCA 72 bp CCATGTTGCTGCCTGGATGGTAATGGACTGAACCTCTaGACCTGTAAGCCAGTCCCAATTAAATGTTGTCCT +
Preference number: 3 (lower is better)
Translates to: PCCCLDGNGLNL*TCKPVPIKCCP
Trigger: AGGACAACATTTAATTGGGACTGGCTTACAGGTTCAGAGGTTCAGTCCATTACCATCCAGGCAGCAACATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR TCA 72 bp CCCATTCCAGCTTCTAACTTTAGGCTTACAGCATACTaGGCTGAGTCCTTGCCTAGTCCCCTAATTCCTGAT +
Preference number: 3 (lower is better)
Translates to: PIPASNFRLTAY*AESLPSPLIPD
Trigger: ATCAGGAATTAGGGGACTAGGCAAGGACTCAGCTCAGTATGCTGTAAGCCTAAAGTTAGAAGCTGGAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 72 bp GTTGCTATGGTGGAGACAGCCAGGTGGCTCACTAAATaGTTTCCCTTGGAAACACTAAGACTGAAAGATGCT +
Preference number: 3 (lower is better)
Translates to: VAMVETARWLTK*FPLETLRLKDA
Trigger: AGCATCTTTCAGTCTTAGTGTTTCCAAGGGAAAGCATTTAGTGAGCCACCTGGCTGTCTCCACCATAGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR TCA 72 bp ATAGCCCGAGGGAGTCCTTACTGTACCTTCTCAAGCTaGACTGATTATTCCCTTTGGAGGATTCTGTTGCTT +
Preference number: 3 (lower is better)
Translates to: IARGSPYCTFSS*TDYSLWRILLL
Trigger: AAGCAACAGAATCCTCCAAAGGGAATAATCAGTTCAGCTTGAGAAGGTACAGTAAGGACTCCCTCGGGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR TCA 72 bp CCATGGAAACCTTGGTCAATCTGTGGTAGGCACCCATaGTTTTCATCACTGTCAACTTTCAATCTCTGGGCA +
Preference number: 3 (lower is better)
Translates to: PWKPWSICGRHP*FSSLSTFNLWA
Trigger: TGCCCAGAGATTGAAAGTTGACAGTGATGAAAATCATGGGTGCCTACCACAGATTGACCAAGGTTTCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR TCA 72 bp CCGAGGGAGTCCTTACTGTACCTTCTCAAGCTGAACTaGTTATTCCCTTTGGAGGATTCTGTTGCTTTCTTA +
Preference number: 3 (lower is better)
Translates to: PRESLLYLLKLN*LFPLEDSVAFL
Trigger: TAAGAAAGCAACAGAATCCTCCAAAGGGAATAATCAGTTCAGCTTGAGAAGGTACAGTAAGGACTCCCTCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 72 bp TACAATGGGAAAACAGGAGAAACATTCACAGCGCTATaGAGCAGTTGCACAGGATACATACAGTCAGTCATC +
Preference number: 3 (lower is better)
Translates to: YNGKTGETFTAL*SSCTGYIQSVI
Trigger: GATGACTGACTGTATGTATCCTGTGCAACTGCTGCATAGCGCTGTGAATGTTTCTCCTGTTTTCCCATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR TCA 72 bp GTCATGCTCCAGCTCAGACAGACTTACTTCTATTACTaGTTTACAACACACAGTTCTCTGCAACTTGCCAAG +
Preference number: 3 (lower is better)
Translates to: VMLQLRQTYFYY*FTTHSSLQLAK
Trigger: CTTGGCAAGTTGCAGAGAACTGTGTGTTGTAAATCAGTAATAGAAGTAAGTCTGTCTGAGCTGGAGCATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 72 bp CTATTACTGATTTACAACACACAGTTCTCTGCAACTTaGCAAGTGGCTATAGATCCTAGCATCCAACCACAC +
Preference number: 3 (lower is better)
Translates to: LLLIYNTQFSAT*QVAIDPSIQPH
Trigger: GTGTGGTTGGATGCTAGGATCTATAGCCACTTGGCAAGTTGCAGAGAACTGTGTGTTGTAAATCAGTAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR GCA 72 bp AATCTTAAAGTAATACATGTTCACATACAGAGGCAATaGCATGTAGAAAGATGCACCTCCAAGGCACTTCCT +
Preference number: 3 (lower is better)
Translates to: NLKVIHVHIQRQ*HVERCTSKALP
Trigger: AGGAAGTGCCTTGGAGGTGCATCTTTCTACATGGCATTGCCTCTGTATGTGAACATGTATTACTTTAAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CCA 72 bp CTCACACAGAACAACGGTAATTGCATGTTAGTGGTTTaGTCCATACTTCACACTGACATATGCTATAAACGA +
Preference number: 3 (lower is better)
Translates to: LTQNNGNCMLVV*SILHTDICYKR
Trigger: TCGTTTATAGCATATGTCAGTGTGAAGTATGGACCAAACCACTAACATGCAATTACCGTTGTTCTGTGTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CCA 90 bp TGCAGCCAGCCACCAGGGGTGTGGCTGTGTGAGGTGCACACCAGGCCTTCCCAGCGGCTTGCGGGTCAGTaGCTGGGGCTGGATCTCCGC +
Preference number: 4 (lower is better)
Translates to: CSQPPGVWLCEVHTRPSQRLAGQ*LGLDLR
Trigger: GCGGAGATCCAGCCCCAGCCACTGACCCGCAAGCCG...CTGGGAAGGCCTGGTGTGCACCTCACACAGCCACACCCCTGGTGGCTGGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp TGCAGCCAGCCACCAGGGGTGTGGCTGTGTGAGGTGCACACCAGGCCTTCCCAGGCAGCAGGATCGGCTTaGGGGTCAGTGGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: CSQPPGVWLCEVHTRPSQAAGSA*GSVAGA
Trigger: AGCCCCAGCCACTGACCCGCAAGCCGATCCTGCTGC...CTGGGAAGGCCTGGTGTGCACCTCACACAGCCACACCCCTGGTGGCTGGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp TGCAGCCAGCCACCAGGGGTGTGGCTGTGTGAGGTGCACACCAGGCCTTCCCAGAGGCCACAGCACTGGTaGGGTAACCTCCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: CSQPPGVWLCEVHTRPSQRPQHW*GNLPGA
Trigger: AGCGCCTGGGAGGTTACCGCACCAGTGCTGTGGCCT...CTGGGAAGGCCTGGTGTGCACCTCACACAGCCACACCCCTGGTGGCTGGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR TCA 90 bp TGCAGCCAGCCACCAGGGGTGTGGCTGTGTGAGGTGCACACCAGGCCTTCCCAGCGCGTTCTTCATCTGTaGTGGCCTCGTGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: CSQPPGVWLCEVHTRPSQRVLHL*WPRGSC
Trigger: ACAGCTGCCACGAGGCCATCACAGATGAAGAACGCG...CTGGGAAGGCCTGGTGTGCACCTCACACAGCCACACCCCTGGTGGCTGGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp TGCAGCCAGCCACCAGGGGTGTGGCTGTGTGAGGTGCACACCAGGCCTTCCCAGTGTTCCAGACGACAATaGCACCGTCACCGCCACATG +
Preference number: 4 (lower is better)
Translates to: CSQPPGVWLCEVHTRPSQCSRRQ*HRHRHM
Trigger: CATGTGGCGGTGACGGTGGCATTGTCGTCTGGAACA...CTGGGAAGGCCTGGTGTGCACCTCACACAGCCACACCCCTGGTGGCTGGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp GAACTCTCAGCTCCTCCTGTACCATGCCTGCCTGGATGCTGCCATGTTGCTGCCGCTTGGAGCTACACTTaGCGCACACGGCCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: ELSAPPVPCLPGCCHVAAAWSYT*RTRPSH
Trigger: GTGGGAAGGCCGTGTGCGGCAAGTGTAGCTCCAAGC...GGCAGCAACATGGCAGCATCCAGGCAGGCATGGTACAGGAGGAGCTGAGAGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CCA 90 bp GTGGGGACTAATGTGGGAAGGGGTGTCGGCATACAGATCAGTGGTACCACCCACTCTGTGATGGCCTCGTaGCAGCTGTCGCAGACCCGC +
Preference number: 4 (lower is better)
Translates to: VGTNVGRGVGIQISGTTHSVMAS*QLSQTR
Trigger: GCGGGTCTGCGACAGCTGCCACGAGGCCATCACAGA...GTGGGTGGTACCACTGATCTGTATGCCGACACCCCTTCCCACATTAGTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CAA 72 bp AGGACCCACACTCGCTGGGAGCCTCGGTCTCTCTTCTaGCTCATCCAGAAGCTCTCTTTCCTCCTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: RTHTRWEPRSLF*LIQKLSFLLPG
Trigger: TCCCGGGAGGAGGAAAGAGAGCTTCTGGATGAGCAAGAAGAGAGACCGAGGCTCCCAGCGAGTGTGGGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp GTGAGGTGCACACCAGGCCTTCCCAGTGCCAGAGAGCAGAAGCGGCTTGTCCTAGCTTGTCCTGTCCTGTaGTCAGCACCCACTCCAGTT +
Preference number: 4 (lower is better)
Translates to: VRCTPGLPSAREQKRLVLACPVL*SAPTPV
Trigger: AACTGGAGTGGGTGCTGAGCACAGGACAGGACAAGC...TAGGACAAGCCGCTTCTGCTCTCTGGCACTGGGAAGGCCTGGTGTGCACCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp GAACTCTCAGCTCCTCCTGTACCATGCCTGCCTGGATGCTGCCATGTTGCTGCCCCACTCTCAGAGCAGTaGCAGGCGAACTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: ELSAPPVPCLPGCCHVAAPLSEQ*QANCLS
Trigger: GGACAAGCAGTTCGCCTGGCACTGCTCTGAGAGTGG...GGCAGCAACATGGCAGCATCCAGGCAGGCATGGTACAGGAGGAGCTGAGAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp GCTAAGAAGGCGATGCCTCTCATCACGATGACAAATACCATAGGCCCAGACCAAGACCCCTCGACCCGCTaGAGCAGGATCGGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: AKKAMPLITMTNTIGPDQDPSTR*SRIGLR
Trigger: CCGCAAGCCGATCCTGCTGCAGCGGGTCGAGGGGTC...TTGGTCTGGGCCTATGGTATTTGTCATCGTGATGAGAGGCATCGCCTTCTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp GAGAGGAAAGGGCAGAGCCATGGAAACCTTGGTCAATCTGTGGTAGGCACCCATATGTTGACCACCTCCTaGGACCCCTCGACCCGCTGC +
Preference number: 4 (lower is better)
Translates to: ERKGQSHGNLGQSVVGTHMLTTS*DPSTRC
Trigger: GCAGCGGGTCGAGGGGTCGCAGGAGGTGGTCAACAT...ATGGGTGCCTACCACAGATTGACCAAGGTTTCCATGGCTCTGCCCTTTCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp GTGGGGACTAATGTGGGAAGGGGTGTCGGCATACAGATCAGTGGTACCACCCACCAGTGCCAGGCGAACTaGTTGTCCTGTCCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: VGTNVGRGVGIQISGTTHQCQAN*LSCPVL
Trigger: GAGCACAGGACAGGACAAGCAGTTCGCCTGGCACTG...GTGGGTGGTACCACTGATCTGTATGCCGACACCCCTTCCCACATTAGTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp CGGACCAGGTTAAATCACAGTGGTGATGACGCCCTGGAGAGAGTTCTGCTCTCACGGGTCCCAGCAGAGTaGTGTCACCCCTCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RTRLNHSGDDALERVLLSRVPAE*CHPSCV
Trigger: CACACAGGAGGGGTGACAGCACTCTGCTGGGACCCG...TGAGAGCAGAACTCTCTCCAGGGCGTCATCACCACTGTGATTTAACCTGGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CCA 90 bp AGGGCGGTACAATGGGAAAACAGGAGAAACATTCACAGCGCTATGCAGCAGTTGTTGCGGGTCAGTGGCTaGGGCTGGATCTCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: RAVQWENRRNIHSAMQQLLRVSG*GWISAA
Trigger: GGCGGCGGAGATCCAGCCCCAGCCACTGACCCGCAA...CAACTGCTGCATAGCGCTGTGAATGTTTCTCCTGTTTTCCCATTGTACCGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp GTGAGGTGCACACCAGGCCTTCCCAGTGCCAGAGAGCAGAAGCGGCTTGTCCTAGCATTGCATGGTAGATaGTTGGCCAGTACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: VRCTPGLPSAREQKRLVLALHGR*LASTVH
Trigger: GTGGACAGTACTGGCCAAGCATCTACCATGCAATGC...TAGGACAAGCCGCTTCTGCTCTCTGGCACTGGGAAGGCCTGGTGTGCACCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CCA 90 bp GTGCACACCAGGCCTTCCCAGTGCCAGAGAGCAGAAGCGGCTTGTCCTAGGAAGTGCATGGTAGATGCTTaGCCAGTACTGTCCACTGTC +
Preference number: 4 (lower is better)
Translates to: VHTRPSQCQRAEAACPRKCMVDA*PVLSTV
Trigger: GACAGTGGACAGTACTGGCCAAGCATCTACCATGCA...CTTCCTAGGACAAGCCGCTTCTGCTCTCTGGCACTGGGAAGGCCTGGTGTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CCA 90 bp GTGGGGACTAATGTGGGAAGGGGTGTCGGCATACAGATCAGTGGTACCACCCACGTCCTTGGAGTTCGATaGCCGTGCCTTTTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: VGTNVGRGVGIQISGTTHVLGVR*PCLFSH
Trigger: GTGGGAGAAAAGGCACGGCCATCGAACTCCAAGGAC...GTGGGTGGTACCACTGATCTGTATGCCGACACCCCTTCCCACATTAGTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp GTGCACACCAGGCCTTCCCAGTGCCAGAGAGCAGAAGCGGCTTGTCCTAGGAAGCACTTCCGGCAGTGGTaGTGTCTTAGTCCAATTTTC +
Preference number: 4 (lower is better)
Translates to: VHTRPSQCQRAEAACPRKHFRQW*CLSPIF
Trigger: GAAAATTGGACTAAGACAGCACCACTGCCGGAAGTG...CTTCCTAGGACAAGCCGCTTCTGCTCTCTGGCACTGGGAAGGCCTGGTGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp TGCAGCCAGCCACCAGGGGTGTGGCTGTGTGAGGTGCACACCAGGCCTTCCCAGGCATCGAAATGCACATaGACAATGTTATGCTTACTG +
Preference number: 4 (lower is better)
Translates to: CSQPPGVWLCEVHTRPSQASKCT*TMLCLL
Trigger: CAGTAAGCATAACATTGTGCATGTGCATTTCGATGC...CTGGGAAGGCCTGGTGTGCACCTCACACAGCCACACCCCTGGTGGCTGGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CCA 90 bp AGGGCGGTACAATGGGAAAACAGGAGAAACATTCACAGCGCTATGCAGCAGTTGCTGAGGCCACAGCACTaGTGCGGTAACCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RAVQWENRRNIHSAMQQLLRPQH*CGNLPG
Trigger: GCCTGGGAGGTTACCGCACCAGTGCTGTGGCCTCAG...CAACTGCTGCATAGCGCTGTGAATGTTTCTCCTGTTTTCCCATTGTACCGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR TCA 90 bp GAACTCTCAGCTCCTCCTGTACCATGCCTGCCTGGATGCTGCCATGTTGCTGCCTTTCTTGTTCCAGTTTaGGGATGGTTACTTGGCCCG +
Preference number: 4 (lower is better)
Translates to: ELSAPPVPCLPGCCHVAAFLVPV*GWLLGP
Trigger: CGGGCCAAGTAACCATCCTCAAACTGGAACAAGAAA...GGCAGCAACATGGCAGCATCCAGGCAGGCATGGTACAGGAGGAGCTGAGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp AGAAACGAGAAGGACTGTCTGTACATGCTGAGGCAAGAACGAGGAGACCGCTTGGTCACCCCTCCTGTGTaGCCTCTGAAGGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: RNEKDCLYMLRQERGDRLVTPPV*PLKDVS
Trigger: GCTCACATCCTTCAGAGGGCACACAGGAGGGGTGAC...CAAGCGGTCTCCTCGTTCTTGCCTCAGCATGTACAGACAGTCCTTCTCGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CAA 72 bp TACCTGCTCCCTCCAGGTGACTCAAGAGGCCAGCTGTaGGACACGCATGGTTTTCCAACTCTTATCCCAAGC +
Preference number: 4 (lower is better)
Translates to: YLLPPGDSRGQL*DTHGFPTLIPS
Trigger: GCTTGGGATAAGAGTTGGAAAACCATGCGTGTCCAACAGCTGGCCTCTTGAGTCACCTGGAGGGAGCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR TCA 90 bp AAGACTTTGAAAAGGTCGTGGCATGGGAAATACAAGGGAGGACCCATGCAGGCAATCAAATTGCAGGCCTaGGGCCACAGCACTGGTGCG +
Preference number: 4 (lower is better)
Translates to: KTLKRSWHGKYKGGPMQAIKLQA*GHSTGA
Trigger: CGCACCAGTGCTGTGGCCTCAGGCCTGCAATTTGAT...TGCCTGCATGGGTCCTCCCTTGTATTTCCCATGCCACGACCTTTTCAAAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR TCA 90 bp CGGACCAGGTTAAATCACAGTGGTGATGACGCCCTGGAGAGAGTTCTGCTCTCACAAACTCAAAGCCCATaGGTGGGATGGAAGAGCGCT +
Preference number: 4 (lower is better)
Translates to: RTRLNHSGDDALERVLLSQTQSP*VGWKSA
Trigger: AGCGCTCTTCCATCCCACTCATGGGCTTTGAGTTTG...TGAGAGCAGAACTCTCTCCAGGGCGTCATCACCACTGTGATTTAACCTGGTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp GAACTCTCAGCTCCTCCTGTACCATGCCTGCCTGGATGCTGCCATGTTGCTGCCGGACCATCGTTACTCTaGTCTGATGTGCTTGATAGT +
Preference number: 4 (lower is better)
Translates to: ELSAPPVPCLPGCCHVAAGPSLL*SDVLDS
Trigger: ACTATCAAGCACATCAGAGCAGAGTAACGATGGTCC...GGCAGCAACATGGCAGCATCCAGGCAGGCATGGTACAGGAGGAGCTGAGAGTTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp AGGGCGGTACAATGGGAAAACAGGAGAAACATTCACAGCGCTATGCAGCAGTTGCTGTCGTGTGTGCTGTaGATAGGAGAGGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: RAVQWENRRNIHSAMQQLLSCVL*IGEGLD
Trigger: GTCCAGGCCCTCTCCTATGCACAGCACACACGACAG...CAACTGCTGCATAGCGCTGTGAATGTTTCTCCTGTTTTCCCATTGTACCGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CCA 90 bp ATCCAGAAGCTCTCTTTCCTCCTCCCGGGAGGATGCTGGACTCAAGTGCTTCTTCTCAAAGCCCATGAGTaGGATGGAAGAGCGCTTGGA +
Preference number: 4 (lower is better)
Translates to: IQKLSFLLPGGCWTQVLLLKAHE*DGRALG
Trigger: TCCAAGCGCTCTTCCATCCCACTCATGGGCTTTGAG...AAGAAGCACTTGAGTCCAGCATCCTCCCGGGAGGAGGAAAGAGAGCTTCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CCA 90 bp AGAAACGAGAAGGACTGTCTGTACATGCTGAGGCAAGAACGAGGAGACCGCTTGTACTGTCATGGAAGGTaGCTGTGGGGGCGCGTTCTT +
Preference number: 4 (lower is better)
Translates to: RNEKDCLYMLRQERGDRLYCHGR*LWGRVL
Trigger: AAGAACGCGCCCCCACAGCCACCTTCCATGACAGTA...CAAGCGGTCTCCTCGTTCTTGCCTCAGCATGTACAGACAGTCCTTCTCGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp GTGGAAGTCTCGAGAAACGAGAAGGACTGTCTGTACATGCTGAGGCAAGAACGAGGAGTTCGATGGCCGTaGCTTTTCTCCCACCGATGT +
Preference number: 4 (lower is better)
Translates to: VEVSRNEKDCLYMLRQERGVRWP*LFSHRC
Trigger: ACATCGGTGGGAGAAAAGGCACGGCCATCGAACTCC...TCGTTCTTGCCTCAGCATGTACAGACAGTCCTTCTCGTTTCTCGAGACTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp GAGAGGAAAGGGCAGAGCCATGGAAACCTTGGTCAATCTGTGGTAGGCACCCATGTTTCAACATCAAATTaGAGGCCTGAGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: ERKGQSHGNLGQSVVGTHVSTSN*RPEATA
Trigger: TGCTGTGGCCTCAGGCCTGCAATTTGATGTTGAAAC...ATGGGTGCCTACCACAGATTGACCAAGGTTTCCATGGCTCTGCCCTTTCCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp GTGAGGTGCACACCAGGCCTTCCCAGTGCCAGAGAGCAGAAGCGGCTTGTCCTATTACTGTCCCACATTTaGTTGAAGTTCCAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: VRCTPGLPSAREQKRLVLLLSHI*LKFQKK
Trigger: TTTCTTCTGGAACTTCAAGCAAATGTGGGACAGTAA...TAGGACAAGCCGCTTCTGCTCTCTGGCACTGGGAAGGCCTGGTGTGCACCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR TCA 90 bp GAGAGGAAAGGGCAGAGCCATGGAAACCTTGGTCAATCTGTGGTAGGCACCCATGTTAAAAGACATGCATaGACATGGAGAAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: ERKGQSHGNLGQSVVGTHVKRHA*TWRRHC
Trigger: GCAATGCCTTCTCCATGTTCATGCATGTCTTTTAAC...ATGGGTGCCTACCACAGATTGACCAAGGTTTCCATGGCTCTGCCCTTTCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp AGGGCGGTACAATGGGAAAACAGGAGAAACATTCACAGCGCTATGCAGCAGTTGACATGGAGAAGGCATTaGATGGTAGATGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: RAVQWENRRNIHSAMQQLTWRRH*MVDAWP
Trigger: TGGCCAAGCATCTACCATGCAATGCCTTCTCCATGT...CAACTGCTGCATAGCGCTGTGAATGTTTCTCCTGTTTTCCCATTGTACCGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp TTGGACACGCATGGTTTTCCAACTCTTATCCCAAGCCATGAAAGAGAAACACGGCACTCAGGGGTCTCCTaGCTTTCCACATCCATGTTC +
Preference number: 4 (lower is better)
Translates to: LDTHGFPTLIPSHERETRHSGVS*LSTSMF
Trigger: GAACATGGATGTGGAAAGGCAGGAGACCCCTGAGTG...CCGTGTTTCTCTTTCATGGCTTGGGATAAGAGTTGGAAAACCATGCGTGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CCA 90 bp AGGGCGGTACAATGGGAAAACAGGAGAAACATTCACAGCGCTATGCAGCAGTTGTTCCAGAAGAAAGGCTaGTCACACTTTTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: RAVQWENRRNIHSAMQQLFQKKG*SHFWQE
Trigger: CTCCTGCCAAAAGTGTGACCAGCCTTTCTTCTGGAA...CAACTGCTGCATAGCGCTGTGAATGTTTCTCCTGTTTTCCCATTGTACCGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CCA 90 bp TTGGACACGCATGGTTTTCCAACTCTTATCCCAAGCCATGAAAGAGAAACACGGTTATGCTTACTGTCATaGAAGGTGGCTGTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: LDTHGFPTLIPSHERETRLCLLS*KVAVGA
Trigger: CGCCCCCACAGCCACCTTCCATGACAGTAAGCATAA...CCGTGTTTCTCTTTCATGGCTTGGGATAAGAGTTGGAAAACCATGCGTGTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CAA 72 bp CAACAGACACTGCTGTCTGAGCTAGCCTCGAGGCTTTaGGTGGAAACATTAAAAGGTGAAAGCGCAGACCTA +
Preference number: 4 (lower is better)
Translates to: QQTLLSELASRL*VETLKGESADL
Trigger: TAGGTCTGCGCTTTCACCTTTTAATGTTTCCACCAAAAGCCTCGAGGCTAGCTCAGACAGCAGTGTCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CCA 90 bp AGAAACGAGAAGGACTGTCTGTACATGCTGAGGCAAGAACGAGGAGACCGCTTGCATTGTCTAGACCTATaGACAGTCTTCTTGTTTCCG +
Preference number: 4 (lower is better)
Translates to: RNEKDCLYMLRQERGDRLHCLDL*TVFLFP
Trigger: CGGAAACAAGAAGACTGTCCATAGGTCTAGACAATG...CAAGCGGTCTCCTCGTTCTTGCCTCAGCATGTACAGACAGTCCTTCTCGTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp GCTAAGAAGGCGATGCCTCTCATCACGATGACAAATACCATAGGCCCAGACCAACTGGTTGCATCGAAATaGACATGCACAATGTTATGC +
Preference number: 4 (lower is better)
Translates to: AKKAMPLITMTNTIGPDQLVASK*TCTMLC
Trigger: GCATAACATTGTGCATGTGCATTTCGATGCAACCAG...TTGGTCTGGGCCTATGGTATTTGTCATCGTGATGAGAGGCATCGCCTTCTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR TCA 90 bp AAGACTTTGAAAAGGTCGTGGCATGGGAAATACAAGGGAGGACCCATGCAGGCATCGCCAATAAACACATaGCGGGTTTCAACATCAAAT +
Preference number: 4 (lower is better)
Translates to: KTLKRSWHGKYKGGPMQASPINT*RVSTSN
Trigger: ATTTGATGTTGAAACCCGTCATGTGTTTATTGGCGA...TGCCTGCATGGGTCCTCCCTTGTATTTCCCATGCCACGACCTTTTCAAAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp AAGACTTTGAAAAGGTCGTGGCATGGGAAATACAAGGGAGGACCCATGCAGGCATACTCTGCTCTGATGTaGTTGATAGTTTTTCACAGG +
Preference number: 4 (lower is better)
Translates to: KTLKRSWHGKYKGGPMQAYSALM*LIVFHR
Trigger: CCTGTGAAAAACTATCAAGCACATCAGAGCAGAGTA...TGCCTGCATGGGTCCTCCCTTGTATTTCCCATGCCACGACCTTTTCAAAGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR GCA 90 bp AAGACTTTGAAAAGGTCGTGGCATGGGAAATACAAGGGAGGACCCATGCAGGCAACATGCACAATGTTATaGTTACTGTCATGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: KTLKRSWHGKYKGGPMQATCTML*LLSWKV
Trigger: CACCTTCCATGACAGTAAGCATAACATTGTGCATGT...TGCCTGCATGGGTCCTCCCTTGTATTTCCCATGCCACGACCTTTTCAAAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CCA 90 bp TTGGACACGCATGGTTTTCCAACTCTTATCCCAAGCCATGAAAGAGAAACACGGTCAGTAACCATCCCCTaGTTGCATCGAAATGCACAT +
Preference number: 4 (lower is better)
Translates to: LDTHGFPTLIPSHERETRSVTIP*LHRNAH
Trigger: ATGTGCATTTCGATGCAACCAGGGGATGGTTACTGA...CCGTGTTTCTCTTTCATGGCTTGGGATAAGAGTTGGAAAACCATGCGTGTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CAA 72 bp GTGGAGACAGCCAGGTGGCTCACTAAATGCTTTCCCTaGGAAACACTAAGACTGAAAGATGCTCTTCATTCA +
Preference number: 4 (lower is better)
Translates to: VETARWLTKCFP*ETLRLKDALHS
Trigger: TGAATGAAGAGCATCTTTCAGTCTTAGTGTTTCCAAGGGAAAGCATTTAGTGAGCCACCTGGCTGTCTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR TCA 90 bp CAGTCATGCTCCAGCTCAGACAGACTTACTTCTATTACTGATTTACAACACACACACATGATGACAGAGTaGTCGGAACTGCCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: QSCSSSDRLTSITDLQHTHMMTE*SELPEN
Trigger: ATTCTCAGGCAGTTCCGATCACTCTGTCATCATGTG...TGTGTGTTGTAAATCAGTAATAGAAGTAAGTCTGTCTGAGCTGGAGCATGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
3UTR CAA 72 bp GATACAAAATTTCAAGTACTTATTCTAAAACCATTGTaGCTATGGTGGAGACAGCCAGGTGGCTCACTAAAT +
Preference number: 4 (lower is better)
Translates to: DTKFQVLILKPL*LWWRQPGGSLN
Trigger: ATTTAGTGAGCCACCTGGCTGTCTCCACCATAGCAACAATGGTTTTAGAATAAGTACTTGAAATTTTGTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS GCA 90 bp ACAATCACCGCCATGTTGACCACCTCCTGCGACCCCTCGACCCGCTaGAGCAGGATCGGCTTGCGGGTCAGTGGCTGGGGCTGGATCTCC +
Preference number: 5 (lower is better)
Translates to: TITAMLTTSCDPSTR*SRIGLRVSGWGWIS
Trigger: GGAGATCCAGCCCCAGCCACTGACCCGCAAGCCGATCCTGCTGCAGCGGGTCGAGGGGTCGCAGGAGGTGGTCAACATGGCGGTGATTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS TCA 90 bp CCTCGTGGCAGCTGTCGCAGACCCGCACTTCAAACTCAAAGCCCATaGGTGGGATGGAAGAGCGCTTGGAGCTACACTTGCCGCACACGG +
Preference number: 5 (lower is better)
Translates to: PRGSCRRPALQTQSP*VGWKSAWSYTCRTR
Trigger: CCGTGTGCGGCAAGTGTAGCTCCAAGCGCTCTTCCATCCCACTCATGGGCTTTGAGTTTGAAGTGCGGGTCTGCGACAGCTGCCACGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS GCA 90 bp ACACCCTCTTCTTTAGGTACAATCACCGCCATGTTGACCACCTCCTaGGACCCCTCGACCCGCTGCAGCAGGATCGGCTTGCGGGTCAGT +
Preference number: 5 (lower is better)
Translates to: TPSSLGTITAMLTTS*DPSTRCSRIGLRVS
Trigger: ACTGACCCGCAAGCCGATCCTGCTGCAGCGGGTCGAGGGGTCGCAGGAGGTGGTCAACATGGCGGTGATTGTACCTAAAGAAGAGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CAA 90 bp GAGAGGAAAGGGCAGAGCCATGGAAACCTTGGTCAATCTGTGGTAGGCACCCATTGCAGCAGGATCGGCTaGCGGGTCAGTGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: ERKGQSHGNLGQSVVGTHCSRIG*RVSGWG
Trigger: GCCCCAGCCACTGACCCGCAAGCCGATCCTGCTGCA...ATGGGTGCCTACCACAGATTGACCAAGGTTTCCATGGCTCTGCCCTTTCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CAA 90 bp GAACTCTCAGCTCCTCCTGTACCATGCCTGCCTGGATGCTGCCATGTTGCTGCCACAATCACCGCCATGTaGACCACCTCCTGCGACCCC +
Preference number: 5 (lower is better)
Translates to: ELSAPPVPCLPGCCHVAATITAM*TTSCDP
Trigger: GGGGTCGCAGGAGGTGGTCAACATGGCGGTGATTGT...GGCAGCAACATGGCAGCATCCAGGCAGGCATGGTACAGGAGGAGCTGAGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CAA 90 bp TGCAGCCAGCCACCAGGGGTGTGGCTGTGTGAGGTGCACACCAGGCCTTCCCAGAACATGGAGAAGGCATaGCATGGTAGATGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: CSQPPGVWLCEVHTRPSQNMEKA*HGRCLA
Trigger: GGCCAAGCATCTACCATGCAATGCCTTCTCCATGTT...CTGGGAAGGCCTGGTGTGCACCTCACACAGCCACACCCCTGGTGGCTGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS CCA 90 bp GTGGCAGCTGTCGCAGACCCGCACTTCAAACTCAAAGCCCATGAGTaGGATGGAAGAGCGCTTGGAGCTACACTTGCCGCACACGGCCTT +
Preference number: 5 (lower is better)
Translates to: VAAVADPHFKLKAHE*DGRALGATLAAHGL
Trigger: AAGGCCGTGTGCGGCAAGTGTAGCTCCAAGCGCTCTTCCATCCCACTCATGGGCTTTGAGTTTGAAGTGCGGGTCTGCGACAGCTGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS TCA 90 bp TTCCACATCCATGTTCCAGACGACAATGCCACCGTCACCGCCACATaGGATGAGCTGTCGTGTGTGCTGTGCATAGGAGAGGGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: FHIHVPDDNATVTAT*DELSCVLCIGEGLD
Trigger: GTCCAGGCCCTCTCCTATGCACAGCACACACGACAGCTCATCTCATGTGGCGGTGACGGTGGCATTGTCGTCTGGAACATGGATGTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS TCA 90 bp CATCCATGTTCCAGACGACAATGCCACCGTCACCGCCACATGAGATaGGCTGTCGTGTGTGCTGTGCATAGGAGAGGGCCTGGACTTTGT +
Preference number: 5 (lower is better)
Translates to: HPCSRRQCHRHRHMR*AVVCAVHRRGPGLC
Trigger: ACAAAGTCCAGGCCCTCTCCTATGCACAGCACACACGACAGCTCATCTCATGTGGCGGTGACGGTGGCATTGTCGTCTGGAACATGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS GCA 90 bp GTCCACTCTCAGAGCAGTGCCAGGCGAACTGCTTGTCCTGTCCTGTaGTCAGCACCCACTCCAGTTCCAGAACAAACAGGACCATCGTTA +
Preference number: 5 (lower is better)
Translates to: VHSQSSARRTACPVL*SAPTPVPEQTGPSL
Trigger: TAACGATGGTCCTGTTTGTTCTGGAACTGGAGTGGGTGCTGAGCACAGGACAGGACAAGCAGTTCGCCTGGCACTGCTCTGAGAGTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CAA 90 bp AGAAACGAGAAGGACTGTCTGTACATGCTGAGGCAAGAACGAGGAGACCGCTTGTGCCAGGCGAACTGCTaGTCCTGTCCTGTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: RNEKDCLYMLRQERGDRLCQANC*SCPVLS
Trigger: GCTGAGCACAGGACAGGACAAGCAGTTCGCCTGGCA...CAAGCGGTCTCCTCGTTCTTGCCTCAGCATGTACAGACAGTCCTTCTCGTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CAA 90 bp GTGAGGTGCACACCAGGCCTTCCCAGTGCCAGAGAGCAGAAGCGGCTTGTCCTATTTTCTTGTTCCAGTTaGAGGATGGTTACTTGGCCC +
Preference number: 5 (lower is better)
Translates to: VRCTPGLPSAREQKRLVLFSCSS*RMVTWP
Trigger: GGGCCAAGTAACCATCCTCAAACTGGAACAAGAAAA...TAGGACAAGCCGCTTCTGCTCTCTGGCACTGGGAAGGCCTGGTGTGCACCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CAA 90 bp GTGCACACCAGGCCTTCCCAGTGCCAGAGAGCAGAAGCGGCTTGTCCTAGGAAGCACAGCTTAATTACCTaGTCAGTTCCAGAAGTCAGT +
Preference number: 5 (lower is better)
Translates to: VHTRPSQCQRAEAACPRKHSLIT*SVPEVS
Trigger: ACTGACTTCTGGAACTGACAAGGTAATTAAGCTGTG...CTTCCTAGGACAAGCCGCTTCTGCTCTCTGGCACTGGGAAGGCCTGGTGTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS CCA 90 bp CTGGTTGCATCGAAATGCACATGCACAATGTTATGCTTACTGTCATaGAAGGTGGCTGTGGGGGCGCGTTCTTCATCTGTGATGGCCTCG +
Preference number: 5 (lower is better)
Translates to: LVASKCTCTMLCLLS*KVAVGARSSSVMAS
Trigger: CGAGGCCATCACAGATGAAGAACGCGCCCCCACAGCCACCTTCCATGACAGTAAGCATAACATTGTGCATGTGCATTTCGATGCAACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS GCA 90 bp GTTCCAGAAGTCAGTAACCATCCCCTGGTTGCATCGAAATGCACATaGACAATGTTATGCTTACTGTCATGGAAGGTGGCTGTGGGGGCG +
Preference number: 5 (lower is better)
Translates to: VPEVSNHPLVASKCT*TMLCLLSWKVAVGA
Trigger: CGCCCCCACAGCCACCTTCCATGACAGTAAGCATAACATTGTGCATGTGCATTTCGATGCAACCAGGGGATGGTTACTGACTTCTGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CAA 90 bp AGAAACGAGAAGGACTGTCTGTACATGCTGAGGCAAGAACGAGGAGACCGCTTGTTGCATGGTAGATGCTaGGCCAGTACTGTCCACTGT +
Preference number: 5 (lower is better)
Translates to: RNEKDCLYMLRQERGDRLLHGRC*ASTVHC
Trigger: ACAGTGGACAGTACTGGCCAAGCATCTACCATGCAA...CAAGCGGTCTCCTCGTTCTTGCCTCAGCATGTACAGACAGTCCTTCTCGTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CAA 90 bp GTGGGGACTAATGTGGGAAGGGGTGTCGGCATACAGATCAGTGGTACCACCCACTCTGCTCTGATGTGCTaGATAGTTTTTCACAGGTGT +
Preference number: 5 (lower is better)
Translates to: VGTNVGRGVGIQISGTTHSALMC*IVFHRC
Trigger: ACACCTGTGAAAAACTATCAAGCACATCAGAGCAGA...GTGGGTGGTACCACTGATCTGTATGCCGACACCCCTTCCCACATTAGTCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CAA 90 bp GTGGAAGTCTCGAGAAACGAGAAGGACTGTCTGTACATGCTGAGGCAAGAACGAGAGAGGGCCTGGACTTaGTCATTGTGTCCTTGGAGT +
Preference number: 5 (lower is better)
Translates to: VEVSRNEKDCLYMLRQERERAWT*SLCPWS
Trigger: ACTCCAAGGACACAATGACAAAGTCCAGGCCCTCTC...TCGTTCTTGCCTCAGCATGTACAGACAGTCCTTCTCGTTTCTCGAGACTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS GCA 90 bp AGTAACCATCCCCTGGTTGCATCGAAATGCACATGCACAATGTTATaGTTACTGTCATGGAAGGTGGCTGTGGGGGCGCGTTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: SNHPLVASKCTCTML*LLSWKVAVGARSSS
Trigger: AGATGAAGAACGCGCCCCCACAGCCACCTTCCATGACAGTAAGCATAACATTGTGCATGTGCATTTCGATGCAACCAGGGGATGGTTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CAA 90 bp CAGTCATGCTCCAGCTCAGACAGACTTACTTCTATTACTGATTTACAACACACACGCTTGGAGCTACACTaGCCGCACACGGCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: QSCSSSDRLTSITDLQHTRLELH*PHTAFP
Trigger: TGGGAAGGCCGTGTGCGGCAAGTGTAGCTCCAAGCG...TGTGTGTTGTAAATCAGTAATAGAAGTAAGTCTGTCTGAGCTGGAGCATGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CAA 90 bp GCTAAGAAGGCGATGCCTCTCATCACGATGACAAATACCATAGGCCCAGACCAAGTAACCATCCCCTGGTaGCATCGAAATGCACATGCA +
Preference number: 5 (lower is better)
Translates to: AKKAMPLITMTNTIGPDQVTIPW*HRNAHA
Trigger: TGCATGTGCATTTCGATGCAACCAGGGGATGGTTAC...TTGGTCTGGGCCTATGGTATTTGTCATCGTGATGAGAGGCATCGCCTTCTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS-3UTR CAA 90 bp GAGAGGAAAGGGCAGAGCCATGGAAACCTTGGTCAATCTGTGGTAGGCACCCATCTTACTGTCCCACATTaGCTTGAAGTTCCAGAAGAA +
Preference number: 5 (lower is better)
Translates to: ERKGQSHGNLGQSVVGTHLTVPH*LEVPEE
Trigger: TTCTTCTGGAACTTCAAGCAAATGTGGGACAGTAAG...ATGGGTGCCTACCACAGATTGACCAAGGTTTCCATGGCTCTGCCCTTTCCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS GCA 90 bp CGGCAGTGGTGCTGTCTTAGTCCAATTTTCTTACTGTCCCACATTTaGTTGAAGTTCCAGAAGAAAGGCTGGTCACACTTTTGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: RQWCCLSPIFLLSHI*LKFQKKGWSHFWQE
Trigger: CTCCTGCCAAAAGTGTGACCAGCCTTTCTTCTGGAACTTCAAGCAAATGTGGGACAGTAAGAAAATTGGACTAAGACAGCACCACTGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS GCA 90 bp TTGTCAGTTCCAGAAGTCAGTAACCATCCCCTGGTTGCATCGAAATaGACATGCACAATGTTATGCTTACTGTCATGGAAGGTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LSVPEVSNHPLVASK*TCTMLCLLSWKVAV
Trigger: CACAGCCACCTTCCATGACAGTAAGCATAACATTGTGCATGTGCATTTCGATGCAACCAGGGGATGGTTACTGACTTCTGGAACTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS CAA 72 bp TCCTGCGACCCCTCGACCCGCTGCAGCAGGATCGGCTaGCGGGTCAGTGGCTGGGGCTGGATCTCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: SCDPSTRCSRIG*RVSGWGWISAA
Trigger: GGCGGCGGAGATCCAGCCCCAGCCACTGACCCGCAAGCCGATCCTGCTGCAGCGGGTCGAGGGGTCGCAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS GCA 72 bp GCCATGTTGACCACCTCCTGCGACCCCTCGACCCGCTaGAGCAGGATCGGCTTGCGGGTCAGTGGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: AMLTTSCDPSTR*SRIGLRVSGWG
Trigger: GCCCCAGCCACTGACCCGCAAGCCGATCCTGCTGCAGCGGGTCGAGGGGTCGCAGGAGGTGGTCAACATGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS CAA 72 bp CCCATGAGTGGGATGGAAGAGCGCTTGGAGCTACACTaGCCGCACACGGCCTTCCCACACTTCCGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: PMSGMEERLELH*PHTAFPHFRQW
Trigger: CCACTGCCGGAAGTGTGGGAAGGCCGTGTGCGGCAAGTGTAGCTCCAAGCGCTCTTCCATCCCACTCATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS CAA 90 bp GAGACGCTGATGACACCCTCTTCTTTAGGTACAATCACCGCCATGTaGACCACCTCCTGCGACCCCTCGACCCGCTGCAGCAGGATCGGC +
Preference number: 6 (lower is better)
Translates to: ETLMTPSSLGTITAM*TTSCDPSTRCSRIG
Trigger: GCCGATCCTGCTGCAGCGGGTCGAGGGGTCGCAGGAGGTGGTCAACATGGCGGTGATTGTACCTAAAGAAGAGGGTGTCATCAGCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS GCA 72 bp TCTTTAGGTACAATCACCGCCATGTTGACCACCTCCTaGGACCCCTCGACCCGCTGCAGCAGGATCGGCTTG +
Preference number: 6 (lower is better)
Translates to: SLGTITAMLTTS*DPSTRCSRIGL
Trigger: CAAGCCGATCCTGCTGCAGCGGGTCGAGGGGTCGCAGGAGGTGGTCAACATGGCGGTGATTGTACCTAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS GCA 72 bp CAACATCAAATTGCAGGCCTGAGGCCACAGCACTGGTaGGGTAACCTCCCAGGCGCTGTCCACTCTCAGAGC +
Preference number: 6 (lower is better)
Translates to: QHQIAGLRPQHW*GNLPGAVHSQS
Trigger: GCTCTGAGAGTGGACAGCGCCTGGGAGGTTACCGCACCAGTGCTGTGGCCTCAGGCCTGCAATTTGATGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS CAA 90 bp ACCCGCACTTCAAACTCAAAGCCCATGAGTGGGATGGAAGAGCGCTaGGAGCTACACTTGCCGCACACGGCCTTCCCACACTTCCGGCAG +
Preference number: 6 (lower is better)
Translates to: TRTSNSKPMSGMEER*ELHLPHTAFPHFRQ
Trigger: CTGCCGGAAGTGTGGGAAGGCCGTGTGCGGCAAGTGTAGCTCCAAGCGCTCTTCCATCCCACTCATGGGCTTTGAGTTTGAAGTGCGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS TCA 72 bp TCCAGACGACAATGCCACCGTCACCGCCACATGAGATaGGCTGTCGTGTGTGCTGTGCATAGGAGAGGGCCT +
Preference number: 6 (lower is better)
Translates to: SRRQCHRHRHMR*AVVCAVHRRGP
Trigger: AGGCCCTCTCCTATGCACAGCACACACGACAGCTCATCTCATGTGGCGGTGACGGTGGCATTGTCGTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS CAA 72 bp ATGACACCCTCTTCTTTAGGTACAATCACCGCCATGTaGACCACCTCCTGCGACCCCTCGACCCGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: MTPSSLGTITAM*TTSCDPSTRCS
Trigger: GCTGCAGCGGGTCGAGGGGTCGCAGGAGGTGGTCAACATGGCGGTGATTGTACCTAAAGAAGAGGGTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS GCA 72 bp CAGAGCAGTGCCAGGCGAACTGCTTGTCCTGTCCTGTaGTCAGCACCCACTCCAGTTCCAGAACAAACAGGA +
Preference number: 6 (lower is better)
Translates to: QSSARRTACPVL*SAPTPVPEQTG
Trigger: TCCTGTTTGTTCTGGAACTGGAGTGGGTGCTGAGCACAGGACAGGACAAGCAGTTCGCCTGGCACTGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS CCA 72 bp GTCGCAGACCCGCACTTCAAACTCAAAGCCCATGAGTaGGATGGAAGAGCGCTTGGAGCTACACTTGCCGCA +
Preference number: 6 (lower is better)
Translates to: VADPHFKLKAHE*DGRALGATLAA
Trigger: TGCGGCAAGTGTAGCTCCAAGCGCTCTTCCATCCCACTCATGGGCTTTGAGTTTGAAGTGCGGGTCTGCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS CAA 72 bp TCAAACTCAAAGCCCATGAGTGGGATGGAAGAGCGCTaGGAGCTACACTTGCCGCACACGGCCTTCCCACAC +
Preference number: 6 (lower is better)
Translates to: SNSKPMSGMEER*ELHLPHTAFPH
Trigger: GTGTGGGAAGGCCGTGTGCGGCAAGTGTAGCTCCAAGCGCTCTTCCATCCCACTCATGGGCTTTGAGTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS TCA 72 bp CATGTTCCAGACGACAATGCCACCGTCACCGCCACATaGGATGAGCTGTCGTGTGTGCTGTGCATAGGAGAG +
Preference number: 6 (lower is better)
Translates to: HVPDDNATVTAT*DELSCVLCIGE
Trigger: CTCTCCTATGCACAGCACACACGACAGCTCATCTCATGTGGCGGTGACGGTGGCATTGTCGTCTGGAACATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS TCA 72 bp AGCTGTCGCAGACCCGCACTTCAAACTCAAAGCCCATaGGTGGGATGGAAGAGCGCTTGGAGCTACACTTGC +
Preference number: 6 (lower is better)
Translates to: SCRRPALQTQSP*VGWKSAWSYTC
Trigger: GCAAGTGTAGCTCCAAGCGCTCTTCCATCCCACTCATGGGCTTTGAGTTTGAAGTGCGGGTCTGCGACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS CAA 90 bp CCCTCCTGTGTGCCCTCTGAAGGATGTGAGCAGTGTGCAGTTTTCTaGTTCCAGTTTGAGGATGGTTACTTGGCCCGAGTGATCGCCAAT +
Preference number: 6 (lower is better)
Translates to: PSCVPSEGCEQCAVF*FQFEDGYLARVIAN
Trigger: ATTGGCGATCACTCGGGCCAAGTAACCATCCTCAAACTGGAACAAGAAAACTGCACACTGCTCACATCCTTCAGAGGGCACACAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS CCA 72 bp CTGTCCCACATTTGCTTGAAGTTCCAGAAGAAAGGCTaGTCACACTTTTGGCAGGAGTCACTGTCCAACCAC +
Preference number: 6 (lower is better)
Translates to: LSHICLKFQKKG*SHFWQESLSNH
Trigger: GTGGTTGGACAGTGACTCCTGCCAAAAGTGTGACCAGCCTTTCTTCTGGAACTTCAAGCAAATGTGGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS CCA 72 bp TCGAAATGCACATGCACAATGTTATGCTTACTGTCATaGAAGGTGGCTGTGGGGGCGCGTTCTTCATCTGTG +
Preference number: 6 (lower is better)
Translates to: SKCTCTMLCLLS*KVAVGARSSSV
Trigger: CACAGATGAAGAACGCGCCCCCACAGCCACCTTCCATGACAGTAAGCATAACATTGTGCATGTGCATTTCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS GCA 72 bp ACATGCATGAACATGGAGAAGGCATTGCATGGTAGATaGTTGGCCAGTACTGTCCACTGTCCCTCTTTAACC +
Preference number: 6 (lower is better)
Translates to: TCMNMEKALHGR*LASTVHCPSLT
Trigger: GGTTAAAGAGGGACAGTGGACAGTACTGGCCAAGCATCTACCATGCAATGCCTTCTCCATGTTCATGCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS CAA 90 bp TGTGAGCAGTGTGCAGTTTTCTTGTTCCAGTTTGAGGATGGTTACTaGGCCCGAGTGATCGCCAATAAACACATGACGGGTTTCAACATC +
Preference number: 6 (lower is better)
Translates to: CEQCAVFLFQFEDGY*ARVIANKHMTGFNI
Trigger: GATGTTGAAACCCGTCATGTGTTTATTGGCGATCACTCGGGCCAAGTAACCATCCTCAAACTGGAACAAGAAAACTGCACACTGCTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS GCA 72 bp GTCAGTAACCATCCCCTGGTTGCATCGAAATGCACATaGACAATGTTATGCTTACTGTCATGGAAGGTGGCT +
Preference number: 6 (lower is better)
Translates to: VSNHPLVASKCT*TMLCLLSWKVA
Trigger: AGCCACCTTCCATGACAGTAAGCATAACATTGTGCATGTGCATTTCGATGCAACCAGGGGATGGTTACTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS CAA 72 bp TGTGCAGTTTTCTTGTTCCAGTTTGAGGATGGTTACTaGGCCCGAGTGATCGCCAATAAACACATGACGGGT +
Preference number: 6 (lower is better)
Translates to: CAVFLFQFEDGY*ARVIANKHMTG
Trigger: ACCCGTCATGTGTTTATTGGCGATCACTCGGGCCAAGTAACCATCCTCAAACTGGAACAAGAAAACTGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS TCA 72 bp GGACAGTCTTCTTGTTTCCGGGTTAAAAGACATGCATaGACATGGAGAAGGCATTGCATGGTAGATGCTTGG +
Preference number: 6 (lower is better)
Translates to: GQSSCFRVKRHA*TWRRHCMVDAW
Trigger: CCAAGCATCTACCATGCAATGCCTTCTCCATGTTCATGCATGTCTTTTAACCCGGAAACAAGAAGACTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS GCA 72 bp CCAGAAGTCAGTAACCATCCCCTGGTTGCATCGAAATaGACATGCACAATGTTATGCTTACTGTCATGGAAG +
Preference number: 6 (lower is better)
Translates to: PEVSNHPLVASK*TCTMLCLLSWK
Trigger: CTTCCATGACAGTAAGCATAACATTGTGCATGTGCATTTCGATGCAACCAGGGGATGGTTACTGACTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS CAA 72 bp CCTTGTCAGTTCCAGAAGTCAGTAACCATCCCCTGGTaGCATCGAAATGCACATGCACAATGTTATGCTTAC +
Preference number: 6 (lower is better)
Translates to: PCQFQKSVTIPW*HRNAHAQCYAY
Trigger: GTAAGCATAACATTGTGCATGTGCATTTCGATGCAACCAGGGGATGGTTACTGACTTCTGGAACTGACAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS GCA 72 bp ACTCCAGTTCCAGAACAAACAGGACCATCGTTACTCTaGTCTGATGTGCTTGATAGTTTTTCACAGGTGTCA +
Preference number: 6 (lower is better)
Translates to: TPVPEQTGPSLL*SDVLDSFSQVS
Trigger: TGACACCTGTGAAAAACTATCAAGCACATCAGAGCAGAGTAACGATGGTCCTGTTTGTTCTGGAACTGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS CCA 72 bp TTACCTTGTCAGTTCCAGAAGTCAGTAACCATCCCCTaGTTGCATCGAAATGCACATGCACAATGTTATGCT +
Preference number: 6 (lower is better)
Translates to: LPCQFQKSVTIP*LHRNAHAQCYA
Trigger: AGCATAACATTGTGCATGTGCATTTCGATGCAACCAGGGGATGGTTACTGACTTCTGGAACTGACAAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10
CDS CAA 72 bp TGTCTTAGTCCAATTTTCTTACTGTCCCACATTTGCTaGAAGTTCCAGAAGAAAGGCTGGTCACACTTTTGG +
Preference number: 6 (lower is better)
Translates to: CLSPIFLLSHIC*KFQKKGWSHFW
Trigger: CCAAAAGTGTGACCAGCCTTTCTTCTGGAACTTCAAGCAAATGTGGGACAGTAAGAAAATTGGACTAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000014691.10