Pregenerated sensors for WDCP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051721Ensembl transcript IDs: ENSMUST00000053034.6, ENSMUST00000085793.3, ENSMUST00000220170.2, ENSMUST00000220215.2, ENSMUST00000223551.2
Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTCGGGCCGGGGGCACACCACTCAGAGAAAGCAGGGTACCTGTCTaGCATGTTCTGGATAGGTCTGAGCCCCCGGTTTATAAACAAACA | + |
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Preference number: 1 (lower is better) Translates to: SRAGGTPLRESRVPV*HVLDRSEPPVYKQT Trigger: TGTTTGTTTATAAACCGGGGGCTCAGACCTATCCAGAACATGCCAGACAGGTACCCTGCTTTCTCTGAGTGGTGTGCCCCCGGCCCGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR TCA 90 bp | GGTGACCTTGAACTCACTGGCCAAATCAATGAGATCCAGGTTCCTTaGGAAAGCTGGTCGACTGGAAGCCTTCCCTCCAGACAGACCCAA | + |
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Preference number: 1 (lower is better) Translates to: GDLELTGQINEIQVP*ESWSTGSLPSRQTQ Trigger: TTGGGTCTGTCTGGAGGGAAGGCTTCCAGTCGACCAGCTTTCTCAAGGAACCTGGATCTCATTGATTTGGCCAGTGAGTTCAAGGTCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| 3UTR TCA 90 bp | ATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCCTGACCTTCGGGAGAGCAGTCGGGTGCTCTTACCCACT | + |
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Preference number: 1 (lower is better) Translates to: ILLQMVVSHHVVAGI*TPDLRESSRVLLPT Trigger: AGTGGGTAAGAGCACCCGACTGCTCTCCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR CCA 90 bp | GGGGCACACCACTCAGAGAAAGCAGGGTACCTGTCTGGCATGTTCTaGATAGGTCTGAGCCCCCGGTTTATAAACAAACAAATGGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: GAHHSEKAGYLSGMF*IGLSPRFINKQMEG Trigger: TCCTTCCATTTGTTTGTTTATAAACCGGGGGCTCAGACCTATCCAGAACATGCCAGACAGGTACCCTGCTTTCTCTGAGTGGTGTGCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR GCA 90 bp | ACCCAATGTCACATGCATGTGACTCCCATGAGCACACACATACACTaGCCAAGAAGTTTACTGTCATCCTTGAAAGGCCAGCCTGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: TQCHMHVTPMSTHIH*PRSLLSSLKGQPEL Trigger: CAGCTCAGGCTGGCCTTTCAAGGATGACAGTAAACTTCTTGGGCAGTGTATGTGTGTGCTCATGGGAGTCACATGCATGTGACATTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| 3UTR TCA 90 bp | CCCATGCGGTGTTGCTGTTTCAGTCTTAGAACTTTGTCCTCAAAGTaGCACAGTCATGAATACATAAGCAGCCATTTGCCCTGCTGCCCG | + |
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Preference number: 1 (lower is better) Translates to: PMRCCCFSLRTLSSK*HSHEYISSHLPCCP Trigger: CGGGCAGCAGGGCAAATGGCTGCTTATGTATTCATGACTGTGTCACTTTGAGGACAAAGTTCTAAGACTGAAACAGCAACACCGCATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR GCA 90 bp | AACACGGGGCCTGGGGGCAATCATAAAGTACAGTCTATATGCCCATaGGGTGTTGCTGTTTCAGTCTTAGAACTTTGTCCTCAAAGTGAC | + |
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Preference number: 1 (lower is better) Translates to: NTGPGGNHKVQSICP*GVAVSVLELCPQSD Trigger: GTCACTTTGAGGACAAAGTTCTAAGACTGAAACAGCAACACCGCATGGGCATATAGACTGTACTTTATGATTGCCCCCAGGCCCCGTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR CCA 90 bp | AGGCGAGTGGCCTCGATCATTGGCACTCCCAGGAGGGTCGAATCTTaGCAGTTTATTAAAAATTTGCCCAGACACATTGTAGTAGTATCT | + |
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Preference number: 1 (lower is better) Translates to: RRVASIIGTPRRVES*QFIKNLPRHIVVVS Trigger: AGATACTACTACAATGTGTCTGGGCAAATTTTTAATAAACTGCCAAGATTCGACCCTCCTGGGAGTGCCAATGATCGAGGCCACTCGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCGATCAGAACAGTCACAGTGGCTGAGATTGTACCCAAGACTCACTGCGAGTAGGCAGGTGGATTTCTaGGTTCGAGGCCAGCATGGT | + |
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Preference number: 2 (lower is better) Translates to: ERSEQSQWLRLYPRLTASRQVDF*VRGQHG Trigger: ACCATGCTGGCCTCGAACTCAGAAATCCACCTGCCT...ACTCGCAGTGAGTCTTGGGTACAATCTCAGCCACTGTGACTGTTCTGATCGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR-3UTR GCA 90 bp | AATACATCTGGAGGAGAGCACTCGAACAGCGAGGCCAGAGAGCAAGGCGTGGTCCAGTCTATATGCCCATaGGGTGTTGCTGTTTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: NTSGGEHSNSEAREQGVVQSICP*GVAVSV Trigger: GACTGAAACAGCAACACCGCATGGGCATATAGACTG...GACCACGCCTTGCTCTCTGGCCTCGCTGTTCGAGTGCTCTCCTCCAGATGTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR-3UTR GCA 90 bp | AATACATCTGGAGGAGAGCACTCGAACAGCGAGGCCAGAGAGCAAGGCGTGGTCATGCCCATGCGGTGTTaGTGTTTCAGTCTTAGAACT | + |
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Preference number: 2 (lower is better) Translates to: NTSGGEHSNSEAREQGVVMPMRC*CFSLRT Trigger: AGTTCTAAGACTGAAACAGCAACACCGCATGGGCAT...GACCACGCCTTGCTCTCTGGCCTCGCTGTTCGAGTGCTCTCCTCCAGATGTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR-3UTR CCA 90 bp | AATACATCTGGAGGAGAGCACTCGAACAGCGAGGCCAGAGAGCAAGGCGTGGTCTGCTACCTCAGGACCTaGATTAAAAGGCTGTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: NTSGGEHSNSEAREQGVVCYLRT*IKRLCC Trigger: ACAACACAGCCTTTTAATCCAGGTCCTGAGGTAGCA...GACCACGCCTTGCTCTCTGGCCTCGCTGTTCGAGTGCTCTCCTCCAGATGTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR-3UTR CCA 90 bp | AATACATCTGGAGGAGAGCACTCGAACAGCGAGGCCAGAGAGCAAGGCGTGGTCCAGGAGCAAGAGGTTTaGTTGTTTTTAGATCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: NTSGGEHSNSEAREQGVVQEQEV*LFLDLE Trigger: CTCCAGATCTAAAAACAACCAAACCTCTTGCTCCTG...GACCACGCCTTGCTCTCTGGCCTCGCTGTTCGAGTGCTCTCCTCCAGATGTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR-3UTR CCA 90 bp | AACTGCAACAGACAGACAGGGGTCCCAAAGGCACAAGAGATTTCCTCTCTGGGTAGCAGGGTACCTGTCTaGCATGTTCTGGATAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: NCNRQTGVPKAQEISSLGSRVPV*HVLDRS Trigger: AGACCTATCCAGAACATGCCAGACAGGTACCCTGCT...ACCCAGAGAGGAAATCTCTTGTGCCTTTGGGACCCCTGTCTGTCTGTTGCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR-3UTR CCA 90 bp | CGATCAGAACAGTCACAGTGGCTGAGATTGTACCCAAGACTCACTGCGAGTCTTATACCAAAGTTAAAGTaGCAAGTCGGGCCGGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: RSEQSQWLRLYPRLTASLIPKLK*QVGPGA Trigger: TGCCCCCGGCCCGACTTGCCACTTTAACTTTGGTAT...AAGACTCGCAGTGAGTCTTGGGTACAATCTCAGCCACTGTGACTGTTCTGATCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR-3UTR GCA 90 bp | AACTGCAACAGACAGACAGGGGTCCCAAAGGCACAAGAGATTTCCTCTCTGGGTGACCTAACAGCTAGGTaGAGTTTAAGGGATCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: NCNRQTGVPKAQEISSLGDLTAR*SLRDQG Trigger: ACCCTGATCCCTTAAACTGCACCTAGCTGTTAGGTC...ACCCAGAGAGGAAATCTCTTGTGCCTTTGGGACCCCTGTCTGTCTGTTGCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCCATCTTCATAAACTGCAACAGACAGACAGGGGTCCCAAAGGCACAAGAGAGGAAGCACACAGCCTaGGGAGAATATGGCAGCATA | + |
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Preference number: 2 (lower is better) Translates to: SSIFINCNRQTGVPKAQERKHTA*GEYGSI Trigger: TATGCTGCCATATTCTCCCCAGGCTGTGTGCTTCCT...CTCTTGTGCCTTTGGGACCCCTGTCTGTCTGTTGCAGTTTATGAAGATGGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGCAGGGCCTGACCTAACAGCTAGGTGCAGTTTAAGGGATCAGGGTCTTTCTCATCTCACCAGCCCCTaGAAATACTTTCTAATCCTA | + |
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Preference number: 2 (lower is better) Translates to: AAGPDLTARCSLRDQGLSHLTSP*KYFLIL Trigger: TAGGATTAGAAAGTATTTTCAGGGGCTGGTGAGATG...AGAAAGACCCTGATCCCTTAAACTGCACCTAGCTGTTAGGTCAGGCCCTGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR-3UTR GCA 90 bp | TTTATGATCCTCAAACTGGAGAATAAAAGAATACATCTGGAGGAGAGCACTCGAAGCCATTTGCCCTGCTaGCCGGAAGGAAGGAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: FMILKLENKRIHLEESTRSHLPC*PEGRKH Trigger: GTGCTTCCTTCCTTCCGGGCAGCAGGGCAAATGGCT...TCGAGTGCTCTCCTCCAGATGTATTCTTTTATTCTCCAGTTTGAGGATCATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTTCCTAGCCAAGCTCCATCTTCATAAACTGCAACAGACAGACAGGGGTCCCACTTTGTCCTCAAAGTaGCACAGTCATGAATACATA | + |
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Preference number: 2 (lower is better) Translates to: SFLAKLHLHKLQQTDRGPTLSSK*HSHEYI Trigger: TATGTATTCATGACTGTGTCACTTTGAGGACAAAGT...GGGACCCCTGTCTGTCTGTTGCAGTTTATGAAGATGGAGCTTGGCTAGGAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR-3UTR TCA 90 bp | CGATCAGAACAGTCACAGTGGCTGAGATTGTACCCAAGACTCACTGCGAGTCTTAAAGTGACACAGTCATaGATACATAAGCAGCCATTT | + |
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Preference number: 2 (lower is better) Translates to: RSEQSQWLRLYPRLTASLKVTQS*IHKQPF Trigger: AAATGGCTGCTTATGTATTCATGACTGTGTCACTTT...AAGACTCGCAGTGAGTCTTGGGTACAATCTCAGCCACTGTGACTGTTCTGATCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCCTAGCCAAGCTCCATCTTCATAAACTGCAACAGACAGACAGGGGTCCCTTTCTAATCCTACACTaGTCTCTTAGATTTGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: SFLAKLHLHKLQQTDRGPFLILH*SLRFER Trigger: CCTTTCAAATCTAAGAGACCAGTGTAGGATTAGAAA...GGGACCCCTGTCTGTCTGTTGCAGTTTATGAAGATGGAGCTTGGCTAGGAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR CAA 90 bp | ATTGGCACTCCCAGGAGGGTCGAATCTTGGCAGTTTATTAAAAATTaGCCCAGACACATTGTAGTAGTATCTGGACCTCTGTCATTCAGA | + |
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Preference number: 2 (lower is better) Translates to: IGTPRRVESWQFIKN*PRHIVVVSGPLSFR Trigger: TCTGAATGACAGAGGTCCAGATACTACTACAATGTGTCTGGGCAAATTTTTAATAAACTGCCAAGATTCGACCCTCCTGGGAGTGCCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR-3UTR GCA 90 bp | TTTATGATCCTCAAACTGGAGAATAAAAGAATACATCTGGAGGAGAGCACTCGAGCAGCCCTTCTCACCTaGATCTGTAGAGCAAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: FMILKLENKRIHLEESTRAALLT*ICRARR Trigger: TCTTCTTGCTCTACAGATGCAGGTGAGAAGGGCTGC...TCGAGTGCTCTCCTCCAGATGTATTCTTTTATTCTCCAGTTTGAGGATCATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCCATCTTCATAAACTGCAACAGACAGACAGGGGTCCCAAAGGCACAAGAGAGGAGGGTCGAATCTTaGCAGTTTATTAAAAATTTG | + |
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Preference number: 2 (lower is better) Translates to: SSIFINCNRQTGVPKAQERRVES*QFIKNL Trigger: CAAATTTTTAATAAACTGCCAAGATTCGACCCTCCT...CTCTTGTGCCTTTGGGACCCCTGTCTGTCTGTTGCAGTTTATGAAGATGGAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR CCA 72 bp | GAGAGCACTCGAACAGCGAGGCCAGAGAGCAAGGCGTaGTCTCCCAGGCGAGTGGCCTCGATCATTGGCACT | + |
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Preference number: 3 (lower is better) Translates to: ESTRTARPESKA*SPRRVASIIGT Trigger: AGTGCCAATGATCGAGGCCACTCGCCTGGGAGACCACGCCTTGCTCTCTGGCCTCGCTGTTCGAGTGCTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR GCA 72 bp | TGTTGCAGCACAGGCTCCCCAGCAGCCCTTCTCACCTaGATCTGTAGAGCAAGAAGACCAGCGGCGTCCAGT | + |
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Preference number: 3 (lower is better) Translates to: CCSTGSPAALLT*ICRARRPAASS Trigger: ACTGGACGCCGCTGGTCTTCTTGCTCTACAGATGCAGGTGAGAAGGGCTGCTGGGGAGCCTGTGCTGCAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR TCA 72 bp | CAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCCTGACCTTCGGGAGAGCAGTCGGGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: QMVVSHHVVAGI*TPDLRESSRVL Trigger: GAGCACCCGACTGCTCTCCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR CCA 72 bp | TTGCCCTGCTGCCCGGAAGGAAGGAAGCACACAGCCTaGGGAGAATATGGCAGCATATTCGTGCTGCAAACC | + |
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Preference number: 3 (lower is better) Translates to: LPCCPEGRKHTA*GEYGSIFVLQT Trigger: GGTTTGCAGCACGAATATGCTGCCATATTCTCCCCAGGCTGTGTGCTTCCTTCCTTCCGGGCAGCAGGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR CCA 72 bp | GGGGGCACACCACTCAGAGAAAGCAGGGTACCTGTCTaGCATGTTCTGGATAGGTCTGAGCCCCCGGTTTAT | + |
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Preference number: 3 (lower is better) Translates to: GGTPLRESRVPV*HVLDRSEPPVY Trigger: ATAAACCGGGGGCTCAGACCTATCCAGAACATGCCAGACAGGTACCCTGCTTTCTCTGAGTGGTGTGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR CCA 72 bp | ATTAAAAGGCTGTGTTGTAGCAACACAGCGCCGTGGTaGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: IKRLCCSNTAPW*RTPLIPALGRQ Trigger: CTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACCACGGCGCTGTGTTGCTACAACACAGCCTTTTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR GCA 72 bp | CACAGTCATGAATACATAAGCAGCCATTTGCCCTGCTaGCCGGAAGGAAGGAAGCACACAGCCTGGGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: HSHEYISSHLPC*PEGRKHTAWGE Trigger: TTCTCCCCAGGCTGTGTGCTTCCTTCCTTCCGGGCAGCAGGGCAAATGGCTGCTTATGTATTCATGACTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR TCA 72 bp | CACACATACACTGCCCAAGAAGTTTACTGTCATCCTTaGAAGGCCAGCCTGAGCTGCATGAGATCCGATCTC | + |
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Preference number: 3 (lower is better) Translates to: HTYTAQEVYCHP*KASLSCMRSDL Trigger: GAGATCGGATCTCATGCAGCTCAGGCTGGCCTTTCAAGGATGACAGTAAACTTCTTGGGCAGTGTATGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| 3UTR GCA 72 bp | CACATGCATGTGACTCCCATGAGCACACACATACACTaGCCAAGAAGTTTACTGTCATCCTTGAAAGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: HMHVTPMSTHIH*PRSLLSSLKGQ Trigger: CTGGCCTTTCAAGGATGACAGTAAACTTCTTGGGCAGTGTATGTGTGTGCTCATGGGAGTCACATGCATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| 3UTR GCA 72 bp | ACGGGGCCTGGGGGCAATCATAAAGTACAGTCTATATaGCCATGCGGTGTTGCTGTTTCAGTCTTAGAACTT | + |
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Preference number: 3 (lower is better) Translates to: TGPGGNHKVQSI*PCGVAVSVLEL Trigger: AAGTTCTAAGACTGAAACAGCAACACCGCATGGGCATATAGACTGTACTTTATGATTGCCCCCAGGCCCCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR GCA 72 bp | ACAGACGTGCAGCCTTCCGTCCATTATCCGAGCAGTTaGCTAATGTATCTGAACCACAAAATAGGCCTTTGG | + |
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Preference number: 3 (lower is better) Translates to: TDVQPSVHYPSS*LMYLNHKIGLW Trigger: CCAAAGGCCTATTTTGTGGTTCAGATACATTAGGCAACTGCTCGGATAATGGACGGAAGGCTGCACGTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR CCA 72 bp | TCTGTCATTCAGAATTGTGTACAGGAGCAAGAGGTTTaGTTGTTTTTAGATCTGGAGAGGGCCGGCCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: SVIQNCVQEQEV*LFLDLERAGQP Trigger: AGGCTGGCCGGCCCTCTCCAGATCTAAAAACAACCAAACCTCTTGCTCCTGTACACAATTCTGAATGACAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR-3UTR CAA 90 bp | TCCTTCCTAGCCAAGCTCCATCTTCATAAACTGCAACAGACAGACAGGGGTCCCACAGGAGCAAGAGGTTaGGTTGTTTTTAGATCTGGA | + |
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Preference number: 3 (lower is better) Translates to: SFLAKLHLHKLQQTDRGPTGARG*VVFRSG Trigger: TCCAGATCTAAAAACAACCAAACCTCTTGCTCCTGT...GGGACCCCTGTCTGTCTGTTGCAGTTTATGAAGATGGAGCTTGGCTAGGAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR GCA 72 bp | CCTGGGGGCAATCATAAAGTACAGTCTATATGCCCATaGGGTGTTGCTGTTTCAGTCTTAGAACTTTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: PGGNHKVQSICP*GVAVSVLELCP Trigger: AGGACAAAGTTCTAAGACTGAAACAGCAACACCGCATGGGCATATAGACTGTACTTTATGATTGCCCCCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR CCA 72 bp | GCCTCGATCATTGGCACTCCCAGGAGGGTCGAATCTTaGCAGTTTATTAAAAATTTGCCCAGACACATTGTA | + |
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Preference number: 3 (lower is better) Translates to: ASIIGTPRRVES*QFIKNLPRHIV Trigger: TACAATGTGTCTGGGCAAATTTTTAATAAACTGCCAAGATTCGACCCTCCTGGGAGTGCCAATGATCGAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR-3UTR CAA 90 bp | TCCCAAAGGCACAAGAGATTTCCTCTCTGGGTACTTTTAAAGGTAAAAGGAGGGGAGCAAGAGGTTTGGTaGTTTTTAGATCTGGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: SQRHKRFPLWVLLKVKGGEQEVW*FLDLER Trigger: CCTCTCCAGATCTAAAAACAACCAAACCTCTTGCTC...CCCTCCTTTTACCTTTAAAAGTACCCAGAGAGGAAATCTCTTGTGCCTTTGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR TCA 72 bp | CACCAAGGATATGATAAAGTCAGGCAAAAACCTGTGTaGGAACTTTTGGTAGGCTACCATCCATCTAACTGT | + |
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Preference number: 3 (lower is better) Translates to: HQGYDKVRQKPV*ELLVGYHPSNC Trigger: ACAGTTAGATGGATGGTAGCCTACCAAAAGTTCTCACACAGGTTTTTGCCTGACTTTATCATATCCTTGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| 3UTR TCA 72 bp | TGTTGCTGTTTCAGTCTTAGAACTTTGTCCTCAAAGTaGCACAGTCATGAATACATAAGCAGCCATTTGCCC | + |
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Preference number: 3 (lower is better) Translates to: CCCFSLRTLSSK*HSHEYISSHLP Trigger: GGGCAAATGGCTGCTTATGTATTCATGACTGTGTCACTTTGAGGACAAAGTTCTAAGACTGAAACAGCAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS-3UTR GCA 90 bp | CTGGAGGAGAGCACTCGAACAGCGAGGCCAGAGAGCAAGGCGTGGTCTCCCAGGATCCAGTGGGAGTCATaGAGCATTTCAACAAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LEESTRTARPESKAWSPRIQWES*SISTRW Trigger: CCACCTTGTTGAAATGCTGCATGACTCCCACTGGAT...CCTGGGAGACCACGCCTTGCTCTCTGGCCTCGCTGTTCGAGTGCTCTCCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS-3UTR CCA 90 bp | CTGGAGGAGAGCACTCGAACAGCGAGGCCAGAGAGCAAGGCGTGGTCTCCCAGGGAAAGGCTGCTTCACTaGGCTTTTGTTTCCCTACAG | + |
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Preference number: 4 (lower is better) Translates to: LEESTRTARPESKAWSPRERLLH*AFVSLQ Trigger: CTGTAGGGAAACAAAAGCCCAGTGAAGCAGCCTTTC...CCTGGGAGACCACGCCTTGCTCTCTGGCCTCGCTGTTCGAGTGCTCTCCTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS-3UTR TCA 90 bp | CTGGAGGAGAGCACTCGAACAGCGAGGCCAGAGAGCAAGGCGTGGTCTCCCAGGGGGAAAGGCTGTCAGTaGACTTTTCTCTATCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: LEESTRTARPESKAWSPRGKGCQ*TFLYLL Trigger: AAGCAGATAGAGAAAAGTTCACTGACAGCCTTTCCC...CCTGGGAGACCACGCCTTGCTCTCTGGCCTCGCTGTTCGAGTGCTCTCCTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS-3UTR CCA 90 bp | AGAAAGCTGGTCGACTGGAAGCCTTCCCTCCAGACAGACCCAATGTCACATGCAGTTAGCAAGAGCCCCTaGCTCAGGGGACTCGACCCT | + |
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Preference number: 4 (lower is better) Translates to: RKLVDWKPSLQTDPMSHAVSKSP*LRGLDP Trigger: AGGGTCGAGTCCCCTGAGCCAGGGGCTCTTGCTAAC...TGCATGTGACATTGGGTCTGTCTGGAGGGAAGGCTTCCAGTCGACCAGCTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| CDS-3UTR TCA 90 bp | AATACATCTGGAGGAGAGCACTCGAACAGCGAGGCCAGAGAGCAAGGCGTGGTCCAGATCCAGAGGCACTaGGAAGGGAGAAACTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NTSGGEHSNSEAREQGVVQIQRH*EGRNCH Trigger: GTGACAGTTTCTCCCTTCTCAGTGCCTCTGGATCTG...GACCACGCCTTGCTCTCTGGCCTCGCTGTTCGAGTGCTCTCCTCCAGATGTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR GCA 90 bp | CTGGAGGAGAGCACTCGAACAGCGAGGCCAGAGAGCAAGGCGTGGTCTCCCAGGAGAAGGAAGAAAGGCTaGTTCACTGGGCTTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LEESTRTARPESKAWSPRRRKKG*FTGLLF Trigger: AAACAAAAGCCCAGTGAAGCAGCCTTTCTTCCTTCT...CCTGGGAGACCACGCCTTGCTCTCTGGCCTCGCTGTTCGAGTGCTCTCCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS-3UTR CCA 90 bp | CGATCAGAACAGTCACAGTGGCTGAGATTGTACCCAAGACTCACTGCGAGTCTTGCCACCACCAGCCGCTaGCCATCCAGGGTCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: RSEQSQWLRLYPRLTASLATTSR*PSRVQQ Trigger: TTGTTGGACCCTGGATGGCCAGCGGCTGGTGGTGGC...AAGACTCGCAGTGAGTCTTGGGTACAATCTCAGCCACTGTGACTGTTCTGATCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS-3UTR GCA 90 bp | GAGCGATCAGAACAGTCACAGTGGCTGAGATTGTACCCAAGACTCACTGCGAGTGTGCTGGGACACAGCTaGCACACGGAGACAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ERSEQSQWLRLYPRLTASVLGHS*HTETSF Trigger: GAAGCTTGTCTCCGTGTGGCAGCTGTGTCCCAGCAC...ACTCGCAGTGAGTCTTGGGTACAATCTCAGCCACTGTGACTGTTCTGATCGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCTGGTCGACTGGAAGCCTTCCCTCCAGACAGACCCAATGTCACATGCAAGGCCCCAGGTTGGATaGACTGCTTGGTTCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RKLVDWKPSLQTDPMSHARPQVG*TAWFSE Trigger: CTCACTGAACCAAGCAGTCCATCCAACCTGGGGCCT...TGCATGTGACATTGGGTCTGTCTGGAGGGAAGGCTTCCAGTCGACCAGCTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| CDS-3UTR CCA 90 bp | CACATGCATGTGACTCCCATGAGCACACACATACACTGCCCAAGAAGTTTACTGGCCACCACCAGCCGCTaGCCATCCAGGGTCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: HMHVTPMSTHIHCPRSLLATTSR*PSRVQQ Trigger: TTGTTGGACCCTGGATGGCCAGCGGCTGGTGGTGGC...CAGTAAACTTCTTGGGCAGTGTATGTGTGTGCTCATGGGAGTCACATGCATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR CCA 90 bp | CACATGCATGTGACTCCCATGAGCACACACATACACTGCCCAAGAAGTTTACTGGGTGCTGGTGTGCTCTaGGGTCCTGCTGGGTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HMHVTPMSTHIHCPRSLLGAGVL*GPAGSR Trigger: CCTAGACCCAGCAGGACCCCAGAGCACACCAGCACC...CAGTAAACTTCTTGGGCAGTGTATGTGTGTGCTCATGGGAGTCACATGCATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| CDS-3UTR CCA 90 bp | AGCTCCATCTTCATAAACTGCAACAGACAGACAGGGGTCCCAAAGGCACAAGAGTCAGTTCTGGGGTGCTaGTGTGCTCTGGGGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSIFINCNRQTGVPKAQESVLGC*CALGSC Trigger: GCAGGACCCCAGAGCACACCAGCACCCCAGAACTGA...CTCTTGTGCCTTTGGGACCCCTGTCTGTCTGTTGCAGTTTATGAAGATGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCAGGGCCTGACCTAACAGCTAGGTGCAGTTTAAGGGATCAGGGTCTTTCTGACTGCTTGGTTCAGTaGGTTCAGTCCTGTCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: AAGPDLTARCSLRDQGLSDCLVQ*VQSCPR Trigger: CCTAGGACAGGACTGAACTCACTGAACCAAGCAGTC...AGAAAGACCCTGATCCCTTAAACTGCACCTAGCTGTTAGGTCAGGCCCTGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR GCA 90 bp | AGCTCCATCTTCATAAACTGCAACAGACAGACAGGGGTCCCAAAGGCACAAGAGGAGACGCCTGCCATTTaGTTGCTCCTGCAGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSIFINCNRQTGVPKAQEETPAI*LLLQCW Trigger: CCAGCACTGCAGGAGCAAGCAAATGGCAGGCGTCTC...CTCTTGTGCCTTTGGGACCCCTGTCTGTCTGTTGCAGTTTATGAAGATGGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR GCA 90 bp | CACATGCATGTGACTCCCATGAGCACACACATACACTGCCCAAGAAGTTTACTGCCGTCCCCACAGCGTTaGTGGCAGGACAGACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HMHVTPMSTHIHCPRSLLPSPQR*WQDRLD Trigger: ATCCAGTCTGTCCTGCCAGCAACGCTGTGGGGACGG...CAGTAAACTTCTTGGGCAGTGTATGTGTGTGCTCATGGGAGTCACATGCATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| CDS-3UTR CCA 90 bp | ATACATCTGGAGGAGAGCACTCGAACAGCGAGGCCAGAGAGCAAGGCGTGGTCTGTTGGATGGACTGCTTaGTTCAGTGAGTTCAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IHLEESTRTARPESKAWSVGWTA*FSEFSP Trigger: AGGACTGAACTCACTGAACCAAGCAGTCCATCCAAC...AGACCACGCCTTGCTCTCTGGCCTCGCTGTTCGAGTGCTCTCCTCCAGATGTAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS-3UTR CCA 90 bp | CATGCATGTGACTCCCATGAGCACACACATACACTGCCCAAGAAGTTTACTGTCTCAGTTCTGGGGTGCTaGTGTGCTCTGGGGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HACDSHEHTHTLPKKFTVSVLGC*CALGSC Trigger: GCAGGACCCCAGAGCACACCAGCACCCCAGAACTGA...GACAGTAAACTTCTTGGGCAGTGTATGTGTGTGCTCATGGGAGTCACATGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR TCA 90 bp | ATCCTAAGAACACACGTAGGCAGCGCTAACACGGGGCCTGGGGGCAATCATAAAGTTCTCCCTTTGAGGTaGATTCAGTTCTGGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILRTHVGSANTGPGGNHKVLPLR*IQFWGA Trigger: AGCACCCCAGAACTGAATTCACCTCAAAGGGAGAAC...TTTATGATTGCCCCCAGGCCCCGTGTTAGCGCTGCCTACGTGTGTTCTTAGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR CCA 90 bp | ATCCTAAGAACACACGTAGGCAGCGCTAACACGGGGCCTGGGGGCAATCATAAACGTCCACTTTTACCCTaGAACCATCTTGGTGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: ILRTHVGSANTGPGGNHKRPLLP*NHLGGR Trigger: ACGTCCACCAAGATGGTTCCAGGGTAAAAGTGGACG...TTTATGATTGCCCCCAGGCCCCGTGTTAGCGCTGCCTACGTGTGTTCTTAGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS-3UTR CCA 90 bp | ATACATCTGGAGGAGAGCACTCGAACAGCGAGGCCAGAGAGCAAGGCGTGGTCTGAAGATTCGCTTCCCTaGGCCATTTCTCTAACTATC | + |
|
Preference number: 4 (lower is better) Translates to: IHLEESTRTARPESKAWSEDSLP*AISLTI Trigger: GATAGTTAGAGAAATGGCCCAGGGAAGCGAATCTTC...AGACCACGCCTTGCTCTCTGGCCTCGCTGTTCGAGTGCTCTCCTCCAGATGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAGCTGGTCGACTGGAAGCCTTCCCTCCAGACAGACCCAATGTCACATGCAGGGTTGAAATGTATGTaGGTCAGATCCAGAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: RKLVDWKPSLQTDPMSHAGLKCM*VRSRGT Trigger: AGTGCCTCTGGATCTGACTCACATACATTTCAACCC...TGCATGTGACATTGGGTCTGTCTGGAGGGAAGGCTTCCAGTCGACCAGCTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| CDS-3UTR GCA 90 bp | CCTGGGGGCAATCATAAAGTACAGTCTATATGCCCATGCGGTGTTGCTGTTTCAGAGACAAGCTTCCTGTaGTGGATGGCAAGCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGGNHKVQSICPCGVAVSETSFL*WMASRA Trigger: GGCTCTGCTTGCCATCCAGCACAGGAAGCTTGTCTC...TGAAACAGCAACACCGCATGGGCATATAGACTGTACTTTATGATTGCCCCCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS-3UTR GCA 90 bp | CATGCATGTGACTCCCATGAGCACACACATACACTGCCCAAGAAGTTTACTGTCCCATTTGCTTGCTCCTaGAGTGCTGGGACACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HACDSHEHTHTLPKKFTVPFACS*SAGTQL Trigger: CAGCTGTGTCCCAGCACTGCAGGAGCAAGCAAATGG...GACAGTAAACTTCTTGGGCAGTGTATGTGTGTGCTCATGGGAGTCACATGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR GCA 90 bp | AGCTCCATCTTCATAAACTGCAACAGACAGACAGGGGTCCCAAAGGCACAAGAGAAAATGGAGACACCCTaGGCAGTCAACACGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSIFINCNRQTGVPKAQEKMETP*AVNTVR Trigger: CCTGACCGTGTTGACTGCGCAGGGTGTCTCCATTTT...CTCTTGTGCCTTTGGGACCCCTGTCTGTCTGTTGCAGTTTATGAAGATGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS-3UTR GCA 90 bp | CACATTGTAGTAGTATCTGGACCTCTGTCATTCAGAATTGTGTACAGGAGCAAGTCTGGGGTGCTGGTGTaGTCTGGGGTCCTGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HIVVVSGPLSFRIVYRSKSGVLV*SGVLLG Trigger: ACCCAGCAGGACCCCAGAGCACACCAGCACCCCAGA...CTTGCTCCTGTACACAATTCTGAATGACAGAGGTCCAGATACTACTACAATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS-3UTR CCA 90 bp | TCCTTCCTAGCCAAGCTCCATCTTCATAAACTGCAACAGACAGACAGGGGTCCCGAGAGGAGGATCCAGTaGGAGTCATGCAGCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFLAKLHLHKLQQTDRGPERRIQ*ESCSIS Trigger: TGAAATGCTGCATGACTCCCACTGGATCCTCCTCTC...GGGACCCCTGTCTGTCTGTTGCAGTTTATGAAGATGGAGCTTGGCTAGGAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS-3UTR CCA 90 bp | TCCCAAAGGCACAAGAGATTTCCTCTCTGGGTACTTTTAAAGGTAAAAGGAGGGGCCCCTAGCTCCCTTTaGCTTGGACAGGCTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SQRHKRFPLWVLLKVKGGAPSSL*LGQAAI Trigger: GATGGCAGCCTGTCCAAGCCAAAGGGAGCTAGGGGC...CCCTCCTTTTACCTTTAAAAGTACCCAGAGAGGAAATCTCTTGTGCCTTTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS-3UTR TCA 90 bp | AGAAAGCTGGTCGACTGGAAGCCTTCCCTCCAGACAGACCCAATGTCACATGCAGGGAAAGGCTGTCAGTaGACTTTTCTCTATCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKLVDWKPSLQTDPMSHAGKGCQ*TFLYLL Trigger: AAGCAGATAGAGAAAAGTTCACTGACAGCCTTTCCC...TGCATGTGACATTGGGTCTGTCTGGAGGGAAGGCTTCCAGTCGACCAGCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| CDS-3UTR GCA 90 bp | CACATGCATGTGACTCCCATGAGCACACACATACACTGCCCAAGAAGTTTACTGAAAATGGAGACACCCTaGGCAGTCAACACGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HMHVTPMSTHIHCPRSLLKMETP*AVNTVR Trigger: CCTGACCGTGTTGACTGCGCAGGGTGTCTCCATTTT...CAGTAAACTTCTTGGGCAGTGTATGTGTGTGCTCATGGGAGTCACATGCATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| CDS-3UTR GCA 90 bp | AGTTCTCCTCAAATGGTAGAGGTTAGTTTAGCACACACAAGACTCTTAGTTGGTTCTGGGGTGCTGGTGTaGTCTGGGGTCCTGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSPQMVEVSLAHTRLLVGSGVLV*SGVLLG Trigger: ACCCAGCAGGACCCCAGAGCACACCAGCACCCCAGA...ACCAACTAAGAGTCTTGTGTGTGCTAAACTAACCTCTACCATTTGAGGAGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| CDS-3UTR GCA 90 bp | ATCCTAAGAACACACGTAGGCAGCGCTAACACGGGGCCTGGGGGCAATCATAAAAGTTCAGAAAGATACTaGTGCATCGCAACCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILRTHVGSANTGPGGNHKSSERY*CIATRC Trigger: ACACCTGGTTGCGATGCAGCAGTATCTTTCTGAACT...TTTATGATTGCCCCCAGGCCCCGTGTTAGCGCTGCCTACGTGTGTTCTTAGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS-3UTR CCA 90 bp | CACATTGTAGTAGTATCTGGACCTCTGTCATTCAGAATTGTGTACAGGAGCAAGGTTAGCAAGAGCCCCTaGCTCAGGGGACTCGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: HIVVVSGPLSFRIVYRSKVSKSP*LRGLDP Trigger: AGGGTCGAGTCCCCTGAGCCAGGGGCTCTTGCTAAC...CTTGCTCCTGTACACAATTCTGAATGACAGAGGTCCAGATACTACTACAATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR CAA 72 bp | GTCATTCAGAATTGTGTACAGGAGCAAGAGGTTTGGTaGTTTTTAGATCTGGAGAGGGCCGGCCAGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VIQNCVQEQEVW*FLDLERAGQPQ Trigger: CTGAGGCTGGCCGGCCCTCTCCAGATCTAAAAACAACCAAACCTCTTGCTCCTGTACACAATTCTGAATGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR CAA 72 bp | CTCTGTCATTCAGAATTGTGTACAGGAGCAAGAGGTTaGGTTGTTTTTAGATCTGGAGAGGGCCGGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LCHSELCTGARG*VVFRSGEGRPA Trigger: GGCTGGCCGGCCCTCTCCAGATCTAAAAACAACCAAACCTCTTGCTCCTGTACACAATTCTGAATGACAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| 3UTR CAA 72 bp | GCTGTCTTCAGACACTCCAGAAGAGGGAGTCAGATCTaGTTACAGATGGTTGTGAGCCACCATGTGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AVFRHSRRGSQI*LQMVVSHHVVA Trigger: AGCAACCACATGGTGGCTCACAACCATCTGTAACAAGATCTGACTCCCTCTTCTGGAGTGTCTGAAGACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS-3UTR TCA 90 bp | CACATGCATGTGACTCCCATGAGCACACACATACACTGCCCAAGAAGTTTACTGTTGGCCTCTCCACTATaGAGCTGTAAGTCAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HMHVTPMSTHIHCPRSLLLASPL*SCKSVR Trigger: CCTGACTGACTTACAGCTTCATAGTGGAGAGGCCAA...CAGTAAACTTCTTGGGCAGTGTATGTGTGTGCTCATGGGAGTCACATGCATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| CDS-3UTR TCA 90 bp | ATCCTAAGAACACACGTAGGCAGCGCTAACACGGGGCCTGGGGGCAATCATAAAACTCTGTTCAGCTTGTaGTGGGTTGAAATGTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: ILRTHVGSANTGPGGNHKTLFSL*WVEMYV Trigger: CACATACATTTCAACCCATCACAAGCTGAACAGAGT...TTTATGATTGCCCCCAGGCCCCGTGTTAGCGCTGCCTACGTGTGTTCTTAGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGTTCTCCTCAAATGGTAGAGGTTAGTTTAGCACACACAAGACTCTTAGTTACAGCATCCTTTGGGTaGCACACGCAGCCCCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSSPQMVEVSLAHTRLLVTASFG*HTQPRG Trigger: TCCTCGGGGCTGCGTGTGGCACCCAAAGGATGCTGT...AACTAAGAGTCTTGTGTGTGCTAAACTAACCTCTACCATTTGAGGAGAACTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| CDS-3UTR CCA 90 bp | TCCCAAAGGCACAAGAGATTTCCTCTCTGGGTACTTTTAAAGGTAAAAGGAGGGAGGCCCCAGGTTGGATaGACTGCTTGGTTCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQRHKRFPLWVLLKVKGGRPQVG*TAWFSE Trigger: CTCACTGAACCAAGCAGTCCATCCAACCTGGGGCCT...CCCTCCTTTTACCTTTAAAAGTACCCAGAGAGGAAATCTCTTGTGCCTTTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS-3UTR CCA 90 bp | AGAAAGCTGGTCGACTGGAAGCCTTCCCTCCAGACAGACCCAATGTCACATGCAAATTTGCTGGATATTTaGCATAGAAGATGGAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKLVDWKPSLQTDPMSHANLLDI*HRRWSG Trigger: GCCGCTCCATCTTCTATGCCAAATATCCAGCAAATT...TGCATGTGACATTGGGTCTGTCTGGAGGGAAGGCTTCCAGTCGACCAGCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| CDS-3UTR CCA 90 bp | TTTATGATCCTCAAACTGGAGAATAAAAGAATACATCTGGAGGAGAGCACTCGAGGTGCTGGTGTGCTCTaGGGTCCTGCTGGGTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: FMILKLENKRIHLEESTRGAGVL*GPAGSR Trigger: CCTAGACCCAGCAGGACCCCAGAGCACACCAGCACC...TCGAGTGCTCTCCTCCAGATGTATTCTTTTATTCTCCAGTTTGAGGATCATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| 3UTR CAA 72 bp | ACACACATACACTGCCCAAGAAGTTTACTGTCATCCTaGAAAGGCCAGCCTGAGCTGCATGAGATCCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: THIHCPRSLLSS*KGQPELHEIRS Trigger: AGATCGGATCTCATGCAGCTCAGGCTGGCCTTTCAAGGATGACAGTAAACTTCTTGGGCAGTGTATGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| 3UTR CAA 72 bp | GACAGACGTGCAGCCTTCCGTCCATTATCCGAGCAGTaGCCTAATGTATCTGAACCACAAAATAGGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DRRAAFRPLSEQ*PNVSEPQNRPL Trigger: CAAAGGCCTATTTTGTGGTTCAGATACATTAGGCAACTGCTCGGATAATGGACGGAAGGCTGCACGTCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR GCA 90 bp | AGTTCTCCTCAAATGGTAGAGGTTAGTTTAGCACACACAAGACTCTTAGTTGGTGTGCTGGGACACAGCTaGCACACGGAGACAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSPQMVEVSLAHTRLLVGVLGHS*HTETSF Trigger: GAAGCTTGTCTCCGTGTGGCAGCTGTGTCCCAGCAC...ACCAACTAAGAGTCTTGTGTGTGCTAAACTAACCTCTACCATTTGAGGAGAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR GCA 90 bp | AGCAGTTCTCCTCAAATGGTAGAGGTTAGTTTAGCACACACAAGACTCTTAGTTGAGACGCCTGCCATTTaGTTGCTCCTGCAGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSPQMVEVSLAHTRLLVETPAI*LLLQCW Trigger: CCAGCACTGCAGGAGCAAGCAAATGGCAGGCGTCTC...AACTAAGAGTCTTGTGTGTGCTAAACTAACCTCTACCATTTGAGGAGAACTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR GCA 90 bp | AATCATAAAGTACAGTCTATATGCCCATGCGGTGTTGCTGTTTCAGTCTTAGAAACAGCATCCTTTGGGTaGCACACGCAGCCCCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NHKVQSICPCGVAVSVLETASFG*HTQPRG Trigger: TCCTCGGGGCTGCGTGTGGCACCCAAAGGATGCTGT...TTCTAAGACTGAAACAGCAACACCGCATGGGCATATAGACTGTACTTTATGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGTTCTCCTCAAATGGTAGAGGTTAGTTTAGCACACACAAGACTCTTAGTTAAGGTTGCTGTCTATTaGCACCACCAGCCGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSPQMVEVSLAHTRLLVKVAVY*HHQPLA Trigger: GGCCAGCGGCTGGTGGTGGCAATAGACAGCAACCTT...AACTAAGAGTCTTGTGTGTGCTAAACTAACCTCTACCATTTGAGGAGAACTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR TCA 90 bp | AGCAGTTCTCCTCAAATGGTAGAGGTTAGTTTAGCACACACAAGACTCTTAGTTAGGAAGGATAGGGAGTaGCTCCCTGACCTCAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSPQMVEVSLAHTRLLVRKDRE*LPDLRG Trigger: ACCTCTGAGGTCAGGGAGTCACTCCCTATCCTTCCT...AACTAAGAGTCTTGTGTGTGCTAAACTAACCTCTACCATTTGAGGAGAACTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR TCA 90 bp | CACATGCATGTGACTCCCATGAGCACACACATACACTGCCCAAGAAGTTTACTGTACCAGGATCAAATGTaGAGAATCTTGGCCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HMHVTPMSTHIHCPRSLLYQDQM*RILASS Trigger: GGAACTGGCCAAGATTCTTCACATTTGATCCTGGTA...CAGTAAACTTCTTGGGCAGTGTATGTGTGTGCTCATGGGAGTCACATGCATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR TCA 90 bp | AGAAAGCTGGTCGACTGGAAGCCTTCCCTCCAGACAGACCCAATGTCACATGCATCATTACTCTCTAACTaGATTTGCTGGATATTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKLVDWKPSLQTDPMSHASLLSN*ICWIFG Trigger: GCCAAATATCCAGCAAATTCAGTTAGAGAGTAATGA...TGCATGTGACATTGGGTCTGTCTGGAGGGAAGGCTTCCAGTCGACCAGCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR TCA 90 bp | CATGCATGTGACTCCCATGAGCACACACATACACTGCCCAAGAAGTTTACTGTCATACTGACCGTATTCTaGAGAAGGAAGAAAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HACDSHEHTHTLPKKFTVILTVF*RRKKGC Trigger: GCAGCCTTTCTTCCTTCTTCAGAATACGGTCAGTAT...GACAGTAAACTTCTTGGGCAGTGTATGTGTGTGCTCATGGGAGTCACATGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR GCA 90 bp | AGCAGTTCTCCTCAAATGGTAGAGGTTAGTTTAGCACACACAAGACTCTTAGTTGAGACAAGCTTCCTGTaGTGGATGGCAAGCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSPQMVEVSLAHTRLLVETSFL*WMASRA Trigger: GGCTCTGCTTGCCATCCAGCACAGGAAGCTTGTCTC...AACTAAGAGTCTTGTGTGTGCTAAACTAACCTCTACCATTTGAGGAGAACTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR GCA 90 bp | TTTATGATCCTCAAACTGGAGAATAAAAGAATACATCTGGAGGAGAGCACTCGAAAGGTTGCTGTCTATTaGCACCACCAGCCGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FMILKLENKRIHLEESTRKVAVY*HHQPLA Trigger: GGCCAGCGGCTGGTGGTGGCAATAGACAGCAACCTT...TCGAGTGCTCTCCTCCAGATGTATTCTTTTATTCTCCAGTTTGAGGATCATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR CCA 90 bp | ATTAATCTTCACACCAAGGATATGATAAAGTCAGGCAAAAACCTGTGTGAGAACTTGCTCCTGCAGTGCTaGGACACAGCTGCCACACGG | + |
|
Preference number: 4 (lower is better) Translates to: INLHTKDMIKSGKNLCENLLLQC*DTAATR Trigger: CCGTGTGGCAGCTGTGTCCCAGCACTGCAGGAGCAA...GTTCTCACACAGGTTTTTGCCTGACTTTATCATATCCTTGGTGTGAAGATTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR CCA 90 bp | CATGCATGTGACTCCCATGAGCACACACATACACTGCCCAAGAAGTTTACTGTCGAAGATTCGCTTCCCTaGGCCATTTCTCTAACTATC | + |
|
Preference number: 4 (lower is better) Translates to: HACDSHEHTHTLPKKFTVEDSLP*AISLTI Trigger: GATAGTTAGAGAAATGGCCCAGGGAAGCGAATCTTC...GACAGTAAACTTCTTGGGCAGTGTATGTGTGTGCTCATGGGAGTCACATGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR CCA 90 bp | CATGCATGTGACTCCCATGAGCACACACATACACTGCCCAAGAAGTTTACTGTCCAGCTCTCTGGAAAGTaGGCACGTTTCCTTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HACDSHEHTHTLPKKFTVQLSGK*ARFLFF Trigger: AAAGAAAAGGAAACGTGCCCACTTTCCAGAGAGCTG...GACAGTAAACTTCTTGGGCAGTGTATGTGTGTGCTCATGGGAGTCACATGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| 3UTR CAA 72 bp | CTGCGAGTCTTCTGCCCTGAGATTATAAAGGACAGCTaGAGCAGTCACACTAATCTTACTCAGGGTCCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LRVFCPEIIKDS*SSHTNLTQGPL Trigger: TAAGGGACCCTGAGTAAGATTAGTGTGACTGCTCAAGCTGTCCTTTATAATCTCAGGGCAGAAGACTCGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR TCA 90 bp | CACATGCATGTGACTCCCATGAGCACACACATACACTGCCCAAGAAGTTTACTGACTCTGTTCAGCTTGTaGTGGGTTGAAATGTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: HMHVTPMSTHIHCPRSLLTLFSL*WVEMYV Trigger: CACATACATTTCAACCCATCACAAGCTGAACAGAGT...CAGTAAACTTCTTGGGCAGTGTATGTGTGTGCTCATGGGAGTCACATGCATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR GCA 90 bp | ATTAATCTTCACACCAAGGATATGATAAAGTCAGGCAAAAACCTGTGTGAGAACTGCTTGCTCCTGCAGTaGTGGGACACAGCTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: INLHTKDMIKSGKNLCENCLLLQ*WDTAAT Trigger: TGTGGCAGCTGTGTCCCAGCACTGCAGGAGCAAGCA...GTTCTCACACAGGTTTTTGCCTGACTTTATCATATCCTTGGTGTGAAGATTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR GCA 90 bp | AATCATAAAGTACAGTCTATATGCCCATGCGGTGTTGCTGTTTCAGTCTTAGAACCATTTGCTTGCTCCTaGAGTGCTGGGACACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NHKVQSICPCGVAVSVLEPFACS*SAGTQL Trigger: CAGCTGTGTCCCAGCACTGCAGGAGCAAGCAAATGG...TTCTAAGACTGAAACAGCAACACCGCATGGGCATATAGACTGTACTTTATGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR CCA 90 bp | AATCATAAAGTACAGTCTATATGCCCATGCGGTGTTGCTGTTTCAGTCTTAGAAGGACAACGGAATCACTaGACAGAGGGGACAAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NHKVQSICPCGVAVSVLEGQRNH*TEGTRD Trigger: GTCCCTTGTCCCCTCTGTCCAGTGATTCCGTTGTCC...TTCTAAGACTGAAACAGCAACACCGCATGGGCATATAGACTGTACTTTATGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR TCA 90 bp | CATGCATGTGACTCCCATGAGCACACACATACACTGCCCAAGAAGTTTACTGTCGGACTTTTAATTTCTTaGATAAGGGCTCTTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HACDSHEHTHTLPKKFTVGLLIS*IRALPD Trigger: GTCTGGAAGAGCCCTTATTCAAGAAATTAAAAGTCC...GACAGTAAACTTCTTGGGCAGTGTATGTGTGTGCTCATGGGAGTCACATGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR CCA 90 bp | ATTAATCTTCACACCAAGGATATGATAAAGTCAGGCAAAAACCTGTGTGAGAACGGACAACGGAATCACTaGACAGAGGGGACAAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: INLHTKDMIKSGKNLCENGQRNH*TEGTRD Trigger: GTCCCTTGTCCCCTCTGTCCAGTGATTCCGTTGTCC...GTTCTCACACAGGTTTTTGCCTGACTTTATCATATCCTTGGTGTGAAGATTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR CCA 90 bp | GGTGTTGCTGTTTCAGTCTTAGAACTTTGTCCTCAAAGTGACACAGTCATGAATCAGCTCTTCTCTCAGTaGGACCTACAGAACAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GVAVSVLELCPQSDTVMNQLFSQ*DLQNKG Trigger: ACCCTTGTTCTGTAGGTCCCACTGAGAGAAGAGCTG...ATTCATGACTGTGTCACTTTGAGGACAAAGTTCTAAGACTGAAACAGCAACACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR CCA 90 bp | CACATTGTAGTAGTATCTGGACCTCTGTCATTCAGAATTGTGTACAGGAGCAAGTCTGAAGACTTCAGGTaGAGGACCAGGATCCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: HIVVVSGPLSFRIVYRSKSEDFR*RTRILI Trigger: AATCAGGATCCTGGTCCTCCACCTGAAGTCTTCAGA...CTTGCTCCTGTACACAATTCTGAATGACAGAGGTCCAGATACTACTACAATGTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| 3UTR CAA 72 bp | CCCAGGAGGGTCGAATCTTGGCAGTTTATTAAAAATTaGCCCAGACACATTGTAGTAGTATCTGGACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PRRVESWQFIKN*PRHIVVVSGPL Trigger: CAGAGGTCCAGATACTACTACAATGTGTCTGGGCAAATTTTTAATAAACTGCCAAGATTCGACCCTCCTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR TCA 90 bp | ATTAATCTTCACACCAAGGATATGATAAAGTCAGGCAAAAACCTGTGTGAGAACGACTGCTTGGTTCAGTaGGTTCAGTCCTGTCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: INLHTKDMIKSGKNLCENDCLVQ*VQSCPR Trigger: CCTAGGACAGGACTGAACTCACTGAACCAAGCAGTC...GTTCTCACACAGGTTTTTGCCTGACTTTATCATATCCTTGGTGTGAAGATTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR TCA 90 bp | TTTATGATCCTCAAACTGGAGAATAAAAGAATACATCTGGAGGAGAGCACTCGATTGGCCTCTCCACTATaGAGCTGTAAGTCAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FMILKLENKRIHLEESTRLASPL*SCKSVR Trigger: CCTGACTGACTTACAGCTTCATAGTGGAGAGGCCAA...TCGAGTGCTCTCCTCCAGATGTATTCTTTTATTCTCCAGTTTGAGGATCATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR TCA 90 bp | ATTAATCTTCACACCAAGGATATGATAAAGTCAGGCAAAAACCTGTGTGAGAACCAGATCCAGAGGCACTaGGAAGGGAGAAACTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: INLHTKDMIKSGKNLCENQIQRH*EGRNCH Trigger: GTGACAGTTTCTCCCTTCTCAGTGCCTCTGGATCTG...GTTCTCACACAGGTTTTTGCCTGACTTTATCATATCCTTGGTGTGAAGATTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR TCA 90 bp | GGTGTTGCTGTTTCAGTCTTAGAACTTTGTCCTCAAAGTGACACAGTCATGAATGGGTTGAAATGTATGTaGGTCAGATCCAGAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GVAVSVLELCPQSDTVMNGLKCM*VRSRGT Trigger: AGTGCCTCTGGATCTGACTCACATACATTTCAACCC...ATTCATGACTGTGTCACTTTGAGGACAAAGTTCTAAGACTGAAACAGCAACACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS-3UTR GCA 90 bp | CACATGCATGTGACTCCCATGAGCACACACATACACTGCCCAAGAAGTTTACTGCTGTCAAGAAACATATaGCCTTTGGTCTTTCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: HMHVTPMSTHIHCPRSLLLSRNI*PLVFHY Trigger: GTAATGAAAGACCAAAGGGCATATGTTTCTTGACAG...CAGTAAACTTCTTGGGCAGTGTATGTGTGTGCTCATGGGAGTCACATGCATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR CCA 90 bp | AGTTCTCCTCAAATGGTAGAGGTTAGTTTAGCACACACAAGACTCTTAGTTGGTGTTGGATGGACTGCTTaGTTCAGTGAGTTCAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSPQMVEVSLAHTRLLVGVGWTA*FSEFSP Trigger: AGGACTGAACTCACTGAACCAAGCAGTCCATCCAAC...ACCAACTAAGAGTCTTGTGTGTGCTAAACTAACCTCTACCATTTGAGGAGAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR CCA 90 bp | AGCAGTTCTCCTCAAATGGTAGAGGTTAGTTTAGCACACACAAGACTCTTAGTTGAAAGGCTGCTTCACTaGGCTTTTGTTTCCCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSPQMVEVSLAHTRLLVERLLH*AFVSLQ Trigger: CTGTAGGGAAACAAAAGCCCAGTGAAGCAGCCTTTC...AACTAAGAGTCTTGTGTGTGCTAAACTAACCTCTACCATTTGAGGAGAACTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR CCA 90 bp | ATTAATCTTCACACCAAGGATATGATAAAGTCAGGCAAAAACCTGTGTGAGAACGCTGGCAGGACAGACTaGATTCCAGAGCTTCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: INLHTKDMIKSGKNLCENAGRTD*IPELPV Trigger: TACAGGAAGCTCTGGAATCCAGTCTGTCCTGCCAGC...GTTCTCACACAGGTTTTTGCCTGACTTTATCATATCCTTGGTGTGAAGATTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| CDS-3UTR TCA 90 bp | GGTGTTGCTGTTTCAGTCTTAGAACTTTGTCCTCAAAGTGACACAGTCATGAATTACCAGGATCAAATGTaGAGAATCTTGGCCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVAVSVLELCPQSDTVMNYQDQM*RILASS Trigger: GGAACTGGCCAAGATTCTTCACATTTGATCCTGGTA...ATTCATGACTGTGTCACTTTGAGGACAAAGTTCTAAGACTGAAACAGCAACACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS-3UTR TCA 90 bp | ATTAATCTTCACACCAAGGATATGATAAAGTCAGGCAAAAACCTGTGTGAGAACGTTCTCCCTTTGAGGTaGATTCAGTTCTGGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: INLHTKDMIKSGKNLCENVLPLR*IQFWGA Trigger: AGCACCCCAGAACTGAATTCACCTCAAAGGGAGAAC...GTTCTCACACAGGTTTTTGCCTGACTTTATCATATCCTTGGTGTGAAGATTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR TCA 90 bp | CACATTGTAGTAGTATCTGGACCTCTGTCATTCAGAATTGTGTACAGGAGCAAGAAGGGTTCTGGTAAATaGGGTGAACATATGGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HIVVVSGPLSFRIVYRSKKGSGK*GEHMEH Trigger: ATGCTCCATATGTTCACCTCATTTACCAGAACCCTT...CTTGCTCCTGTACACAATTCTGAATGACAGAGGTCCAGATACTACTACAATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS-3UTR GCA 90 bp | CACATTGTAGTAGTATCTGGACCTCTGTCATTCAGAATTGTGTACAGGAGCAAGTATACGAATGAAGGTTaGTGTCTATTGCCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HIVVVSGPLSFRIVYRSKYTNEG*CLLPPP Trigger: TGGTGGTGGCAATAGACAGCAACCTTCATTCGTATA...CTTGCTCCTGTACACAATTCTGAATGACAGAGGTCCAGATACTACTACAATGTG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS-3UTR GCA 90 bp | AGCAGTTCTCCTCAAATGGTAGAGGTTAGTTTAGCACACACAAGACTCTTAGTTAGTTCAGAAAGATACTaGTGCATCGCAACCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSPQMVEVSLAHTRLLVSSERY*CIATRC Trigger: ACACCTGGTTGCGATGCAGCAGTATCTTTCTGAACT...AACTAAGAGTCTTGTGTGTGCTAAACTAACCTCTACCATTTGAGGAGAACTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| CDS-3UTR CCA 90 bp | ATTAATCTTCACACCAAGGATATGATAAAGTCAGGCAAAAACCTGTGTGAGAACCGTCCACTTTTACCCTaGAACCATCTTGGTGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: INLHTKDMIKSGKNLCENRPLLP*NHLGGR Trigger: ACGTCCACCAAGATGGTTCCAGGGTAAAAGTGGACG...GTTCTCACACAGGTTTTTGCCTGACTTTATCATATCCTTGGTGTGAAGATTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR TCA 90 bp | AGTTCTCCTCAAATGGTAGAGGTTAGTTTAGCACACACAAGACTCTTAGTTGGTCAGCTTGTGATGGGTTaGAATGTATGTGAGTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSPQMVEVSLAHTRLLVGQLVMG*NVCESD Trigger: ATCTGACTCACATACATTTCAACCCATCACAAGCTG...ACCAACTAAGAGTCTTGTGTGTGCTAAACTAACCTCTACCATTTGAGGAGAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR TCA 90 bp | TCCCAAAGGCACAAGAGATTTCCTCTCTGGGTACTTTTAAAGGTAAAAGGAGGGTCATTACTCTCTAACTaGATTTGCTGGATATTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQRHKRFPLWVLLKVKGGSLLSN*ICWIFG Trigger: GCCAAATATCCAGCAAATTCAGTTAGAGAGTAATGA...CCCTCCTTTTACCTTTAAAAGTACCCAGAGAGGAAATCTCTTGTGCCTTTGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR TCA 90 bp | TTTATGATCCTCAAACTGGAGAATAAAAGAATACATCTGGAGGAGAGCACTCGAATACTGACCGTATTCTaGAGAAGGAAGAAAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FMILKLENKRIHLEESTRILTVF*RRKKGC Trigger: GCAGCCTTTCTTCCTTCTTCAGAATACGGTCAGTAT...TCGAGTGCTCTCCTCCAGATGTATTCTTTTATTCTCCAGTTTGAGGATCATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR TCA 90 bp | AGTTCTCCTCAAATGGTAGAGGTTAGTTTAGCACACACAAGACTCTTAGTTGGTACTGTACCTGGTAAATaGGGTGAACATATGGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSPQMVEVSLAHTRLLVGTVPGK*GEHMEH Trigger: ATGCTCCATATGTTCACCTCATTTACCAGGTACAGT...ACCAACTAAGAGTCTTGTGTGTGCTAAACTAACCTCTACCATTTGAGGAGAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR GCA 90 bp | AGTTCTCCTCAAATGGTAGAGGTTAGTTTAGCACACACAAGACTCTTAGTTGGTTATACGAATGAAGGTTaGTGTCTATTGCCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSPQMVEVSLAHTRLLVGYTNEG*CLLPPP Trigger: TGGTGGTGGCAATAGACAGCAACCTTCATTCGTATA...ACCAACTAAGAGTCTTGTGTGTGCTAAACTAACCTCTACCATTTGAGGAGAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR GCA 90 bp | AGTTCTCCTCAAATGGTAGAGGTTAGTTTAGCACACACAAGACTCTTAGTTGGTAGAAGGAAGAAAGGCTaGTTCACTGGGCTTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSPQMVEVSLAHTRLLVGRRKKG*FTGLLF Trigger: AAACAAAAGCCCAGTGAAGCAGCCTTTCTTCCTTCT...ACCAACTAAGAGTCTTGTGTGTGCTAAACTAACCTCTACCATTTGAGGAGAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
||
| CDS-3UTR CCA 90 bp | GGTGTTGCTGTTTCAGTCTTAGAACTTTGTCCTCAAAGTGACACAGTCATGAATAATTTGCTGGATATTTaGCATAGAAGATGGAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GVAVSVLELCPQSDTVMNNLLDI*HRRWSG Trigger: GCCGCTCCATCTTCTATGCCAAATATCCAGCAAATT...ATTCATGACTGTGTCACTTTGAGGACAAAGTTCTAAGACTGAAACAGCAACACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR CCA 90 bp | TTTATGATCCTCAAACTGGAGAATAAAAGAATACATCTGGAGGAGAGCACTCGACAGCTCTCTGGAAAGTaGGCACGTTTCCTTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FMILKLENKRIHLEESTRQLSGK*ARFLFF Trigger: AAAGAAAAGGAAACGTGCCCACTTTCCAGAGAGCTG...TCGAGTGCTCTCCTCCAGATGTATTCTTTTATTCTCCAGTTTGAGGATCATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR TCA 90 bp | TTTATGATCCTCAAACTGGAGAATAAAAGAATACATCTGGAGGAGAGCACTCGACAGCTTGTGATGGGTTaGAATGTATGTGAGTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FMILKLENKRIHLEESTRQLVMG*NVCESD Trigger: ATCTGACTCACATACATTTCAACCCATCACAAGCTG...TCGAGTGCTCTCCTCCAGATGTATTCTTTTATTCTCCAGTTTGAGGATCATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR TCA 90 bp | AATCATAAAGTACAGTCTATATGCCCATGCGGTGTTGCTGTTTCAGTCTTAGAAGGACTTTTAATTTCTTaGATAAGGGCTCTTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NHKVQSICPCGVAVSVLEGLLIS*IRALPD Trigger: GTCTGGAAGAGCCCTTATTCAAGAAATTAAAAGTCC...TTCTAAGACTGAAACAGCAACACCGCATGGGCATATAGACTGTACTTTATGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS-3UTR GCA 90 bp | TTTATGATCCTCAAACTGGAGAATAAAAGAATACATCTGGAGGAGAGCACTCGACTGTCAAGAAACATATaGCCTTTGGTCTTTCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: FMILKLENKRIHLEESTRLSRNI*PLVFHY Trigger: GTAATGAAAGACCAAAGGGCATATGTTTCTTGACAG...TCGAGTGCTCTCCTCCAGATGTATTCTTTTATTCTCCAGTTTGAGGATCATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
||
| CDS GCA 90 bp | CCTGCAGTGCTGGGACACAGCTGCCACACGGAGACAAGCTTCCTGTaGTGGATGGCAAGCAGAGCCGGCGAGCGCACTGTTCTGACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PAVLGHSCHTETSFL*WMASRAGERTVLTG Trigger: ACCAGTCAGAACAGTGCGCTCGCCGGCTCTGCTTGCCATCCAGCACAGGAAGCTTGTCTCCGTGTGGCAGCTGTGTCCCAGCACTGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
||
| CDS TCA 90 bp | CAGCCCCGAGGAAGGATAGGGAGTGACTCCCTGACCTCAGAGGTCTaGGACGCCTGCCATTTGCTTGCTCCTGCAGTGCTGGGACACAGC | + |
|
Preference number: 5 (lower is better) Translates to: QPRGRIGSDSLTSEV*DACHLLAPAVLGHS Trigger: GCTGTGTCCCAGCACTGCAGGAGCAAGCAAATGGCAGGCGTCTCAGACCTCTGAGGTCAGGGAGTCACTCCCTATCCTTCCTCGGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
||
| CDS TCA 90 bp | AGCATCCTTTGGGTGCCACACGCAGCCCCGAGGAAGGATAGGGAGTaGCTCCCTGACCTCAGAGGTCTGAGACGCCTGCCATTTGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SILWVPHAAPRKDRE*LPDLRGLRRLPFAC Trigger: GCAAGCAAATGGCAGGCGTCTCAGACCTCTGAGGTCAGGGAGTCACTCCCTATCCTTCCTCGGGGCTGCGTGTGGCACCCAAAGGATGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
||
| CDS GCA 90 bp | CTCCCTGACCTCAGAGGTCTGAGACGCCTGCCATTTGCTTGCTCCTaGAGTGCTGGGACACAGCTGCCACACGGAGACAAGCTTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LPDLRGLRRLPFACS*SAGTQLPHGDKLPV Trigger: CACAGGAAGCTTGTCTCCGTGTGGCAGCTGTGTCCCAGCACTGCAGGAGCAAGCAAATGGCAGGCGTCTCAGACCTCTGAGGTCAGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
||
| CDS CCA 90 bp | CCTCAGAGGTCTGAGACGCCTGCCATTTGCTTGCTCCTGCAGTGCTaGGACACAGCTGCCACACGGAGACAAGCTTCCTGTGCTGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: PQRSETPAICLLLQC*DTAATRRQASCAGW Trigger: CCATCCAGCACAGGAAGCTTGTCTCCGTGTGGCAGCTGTGTCCCAGCACTGCAGGAGCAAGCAAATGGCAGGCGTCTCAGACCTCTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 90 bp | AGGACCAGGATCCTGATTGTGAGAAAGAGGGCCCCTAGCTCCCTTTaGCTTGGACAGGCTGCCATCTCTTACCACGACTGTCTGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RTRILIVRKRAPSSL*LGQAAISYHDCLGS Trigger: GCTGCCCAGACAGTCGTGGTAAGAGATGGCAGCCTGTCCAAGCCAAAGGGAGCTAGGGGCCCTCTTTCTCACAATCAGGATCCTGGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS-3UTR CAA 90 bp | AGAAAGCTGGTCGACTGGAAGCCTTCCCTCCAGACAGACCCAATGTCACATGCAACCGTCCCCACAGCGTaGCTGGCAGGACAGACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RKLVDWKPSLQTDPMSHATVPTA*LAGQTG Trigger: TCCAGTCTGTCCTGCCAGCAACGCTGTGGGGACGGT...TGCATGTGACATTGGGTCTGTCTGGAGGGAAGGCTTCCAGTCGACCAGCTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| CDS CCA 90 bp | CGATTCCCATCAGTCCAGGCCAGGCCCCAGGTTGGATGGACTGCTTaGTTCAGTGAGTTCAGTCCTGTCCTAGGCAGTTTTCCGTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RFPSVQARPQVGWTA*FSEFSPVLGSFPFP Trigger: GGGAAACGGAAAACTGCCTAGGACAGGACTGAACTCACTGAACCAAGCAGTCCATCCAACCTGGGGCCTGGCCTGGACTGATGGGAATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 90 bp | CCCGGTGGCTTCGATGGAGCGGATGGAGCAATTCACAGGAAACACTaGGCAGAAGGAGCAGCTGTGAAGGGACTTCTGAGAACTGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PGGFDGADGAIHRKH*AEGAAVKGLLRTVP Trigger: TGGGACAGTTCTCAGAAGTCCCTTCACAGCTGCTCCTTCTGCCCAGTGTTTCCTGTGAATTGCTCCATCCGCTCCATCGAAGCCACCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS-3UTR CAA 90 bp | AATACATCTGGAGGAGAGCACTCGAACAGCGAGGCCAGAGAGCAAGGCGTGGTCCTAGCTCCCTTTGGCTaGGACAGGCTGCCATCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: NTSGGEHSNSEAREQGVVLAPFG*DRLPSL Trigger: AAGAGATGGCAGCCTGTCCAAGCCAAAGGGAGCTAG...GACCACGCCTTGCTCTCTGGCCTCGCTGTTCGAGTGCTCTCCTCCAGATGTATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS GCA 90 bp | ACCCTGGAACCATCTTGGTGGACGTTAGGAAAAATGGAGACACCCTaGGCAGTCAACACGGTCAGGACAGCATCCTTTGGGTGCCACACG | + |
|
Preference number: 5 (lower is better) Translates to: TLEPSWWTLGKMETP*AVNTVRTASFGCHT Trigger: CGTGTGGCACCCAAAGGATGCTGTCCTGACCGTGTTGACTGCGCAGGGTGTCTCCATTTTTCCTAACGTCCACCAAGATGGTTCCAGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 90 bp | AGTGGGACCTACAGAACAAGGGTTCTGGTAAATGAGGTGAACATATaGAGCATCCTGCGAGGGTGGATATGCGGGGGCGACGCGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SGTYRTRVLVNEVNI*SILRGWICGGDALL Trigger: GAGAAGCGCGTCGCCCCCGCATATCCACCCTCGCAGGATGCTCCATATGTTCACCTCATTTACCAGAACCCTTGTTCTGTAGGTCCCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085793.3 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS-3UTR CAA 90 bp | TCCTTCCTAGCCAAGCTCCATCTTCATAAACTGCAACAGACAGACAGGGGTCCCGAAGGTTGCTGTCTATaGCCACCACCAGCCGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SFLAKLHLHKLQQTDRGPEGCCL*PPPAAG Trigger: GCCAGCGGCTGGTGGTGGCAATAGACAGCAACCTTC...GGGACCCCTGTCTGTCTGTTGCAGTTTATGAAGATGGAGCTTGGCTAGGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS TCA 90 bp | GTGGATATGCGGGGGCGACGCGCTTCTCCTTGTGTAGAAAACCCGTaGGTTCAGAAAGATACTGCTGCATCGCAACCAGGTGTCGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VDMRGRRASPCVENP*VQKDTAASQPGVER Trigger: TCTCTCGACACCTGGTTGCGATGCAGCAGTATCTTTCTGAACTCACGGGTTTTCTACACAAGGAGAAGCGCGTCGCCCCCGCATATCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 90 bp | AGGACTACACGATTCCCATCAGTCCAGGCCAGGCCCCAGGTTGGATaGACTGCTTGGTTCAGTGAGTTCAGTCCTGTCCTAGGCAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: RTTRFPSVQARPQVG*TAWFSEFSPVLGSF Trigger: AAAACTGCCTAGGACAGGACTGAACTCACTGAACCAAGCAGTCCATCCAACCTGGGGCCTGGCCTGGACTGATGGGAATCGTGTAGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 90 bp | CGGCCCTTGGTGTTGACGTCCACTTTTACCCTGGAACCATCTTGGTaGACGTTAGGAAAAATGGAGACACCCTGCGCAGTCAACACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RPLVLTSTFTLEPSW*TLGKMETPCAVNTV Trigger: GACCGTGTTGACTGCGCAGGGTGTCTCCATTTTTCCTAACGTCCACCAAGATGGTTCCAGGGTAAAAGTGGACGTCAACACCAAGGGCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 90 bp | ACGCGGCCCTTGGTGTTGACGTCCACTTTTACCCTGGAACCATCTTaGTGGACGTTAGGAAAAATGGAGACACCCTGCGCAGTCAACACG | + |
|
Preference number: 5 (lower is better) Translates to: TRPLVLTSTFTLEPS*WTLGKMETPCAVNT Trigger: CGTGTTGACTGCGCAGGGTGTCTCCATTTTTCCTAACGTCCACCAAGATGGTTCCAGGGTAAAAGTGGACGTCAACACCAAGGGCCGCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS TCA 90 bp | CAGCTCTTCTCTCAGTGGGACCTACAGAACAAGGGTTCTGGTAAATaGGGTGAACATATGGAGCATCCTGCGAGGGTGGATATGCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QLFSQWDLQNKGSGK*GEHMEHPARVDMRG Trigger: CCCCCGCATATCCACCCTCGCAGGATGCTCCATATGTTCACCTCATTTACCAGAACCCTTGTTCTGTAGGTCCCACTGAGAGAAGAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085793.3 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 90 bp | GAAGTTCCTCAAGAAAGACTGTACCTGGTAAATGAGGTGAACATATaGAGCATCCTGCGAGGGTGGATATGCGGGGGCGACGCGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: EVPQERLYLVNEVNI*SILRGWICGGDALL Trigger: GAGAAGCGCGTCGCCCCCGCATATCCACCCTCGCAGGATGCTCCATATGTTCACCTCATTTACCAGGTACAGTCTTTCTTGAGGAACTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| CDS CCA 90 bp | GCTCCCTTTGGCTTGGACAGGCTGCCATCTCTTACCACGACTGTCTaGGCAGCCTTGAAAGTTAATGGGATGAAACCTTGGCTGTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: APFGLDRLPSLTTTV*AALKVNGMKPWLSA Trigger: TGCTGACAGCCAAGGTTTCATCCCATTAACTTTCAAGGCTGCCCAGACAGTCGTGGTAAGAGATGGCAGCCTGTCCAAGCCAAAGGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS TCA 90 bp | GCAGCATTTCAACAAGGTGGAGGCCAAACATCTGTTGAACGGTACTaGGCCTCAGCTTGCCATCGCAGAGAAGCACAGCTCTTCTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: AAFQQGGGQTSVERY*ASACHRREAQLFSQ Trigger: CTGAGAGAAGAGCTGTGCTTCTCTGCGATGGCAAGCTGAGGCTCAGTACCGTTCAACAGATGTTTGGCCTCCACCTTGTTGAAATGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085793.3 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS TCA 90 bp | TGGGAGTCATGCAGCATTTCAACAAGGTGGAGGCCAAACATCTGTTaGACGGTACTGAGCCTCAGCTTGCCATCGCAGAGAAGCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: WESCSISTRWRPNIC*TVLSLSLPSQRSTA Trigger: AGCTGTGCTTCTCTGCGATGGCAAGCTGAGGCTCAGTACCGTTCAACAGATGTTTGGCCTCCACCTTGTTGAAATGCTGCATGACTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS GCA 90 bp | AAGCTACAAAGCTTATGGAGTGGAAGTTCGGTGGCTATAGCAACCTaGGAGTTCCCGGTGGCTTCGATGGAGCGGATGGAGCAATTCACA | + |
|
Preference number: 5 (lower is better) Translates to: KLQSLWSGSSVAIAT*EFPVASMERMEQFT Trigger: TGTGAATTGCTCCATCCGCTCCATCGAAGCCACCGGGAACTCGCAGGTTGCTATAGCCACCGAACTTCCACTCCATAAGCTTTGTAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 90 bp | GGTGGACCGTCCAAGGCTTCAGATGCATTTAAGCTACAAAGCTTATaGAGTGGAAGTTCGGTGGCTATAGCAACCTGCGAGTTCCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GGPSKASDAFKLQSL*SGSSVAIATCEFPV Trigger: CACCGGGAACTCGCAGGTTGCTATAGCCACCGAACTTCCACTCCATAAGCTTTGTAGCTTAAATGCATCTGAAGCCTTGGACGGTCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 90 bp | CCTGCTCATCTACAGGGCGAGTATGAACAGAGCCATCGTCACCGTTaGGTGGACCGTCCAAGGCTTCAGATGCATTTAAGCTACAAAGCT | + |
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Preference number: 5 (lower is better) Translates to: PAHLQGEYEQSHRHR*VDRPRLQMHLSYKA Trigger: AGCTTTGTAGCTTAAATGCATCTGAAGCCTTGGACGGTCCACCCAACGGTGACGATGGCTCTGTTCATACTCGCCCTGTAGATGAGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 90 bp | ACCACGACTGTCTGGGCAGCCTTGAAAGTTAATGGGATGAAACCTTaGCTGTCAGCAGAGAGGAGGATCCAGTGGGAGTCATGCAGCATT | + |
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Preference number: 5 (lower is better) Translates to: TTTVWAALKVNGMKP*LSAERRIQWESCSI Trigger: AATGCTGCATGACTCCCACTGGATCCTCCTCTCTGCTGACAGCCAAGGTTTCATCCCATTAACTTTCAAGGCTGCCCAGACAGTCGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS TCA 90 bp | AAGACCTCATGCAGCATTTCAACAAGGTGGAGGCCAAACATCTGTTaGACGGTACTGAGCCTCAGCTTGCCATCGCAGAGAAGCACAGCT | + |
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Preference number: 5 (lower is better) Translates to: KTSCSISTRWRPNIC*TVLSLSLPSQRSTA Trigger: AGCTGTGCTTCTCTGCGATGGCAAGCTGAGGCTCAGTACCGTTCAACAGATGTTTGGCCTCCACCTTGTTGAAATGCTGCATGAGGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085793.3 ENSMUST00000220215.2 |
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| CDS GCA 90 bp | ACGCGCTTCTCCTTGTGTAGAAAACCCGTGAGTTCAGAAAGATACTaGTGCATCGCAACCAGGTGTCGAGAGAGGATTTCCAGCTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: TRFSLCRKPVSSERY*CIATRCRERISSSL Trigger: CAGAGAGCTGGAAATCCTCTCTCGACACCTGGTTGCGATGCAGCAGTATCTTTCTGAACTCACGGGTTTTCTACACAAGGAGAAGCGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 90 bp | AGAGGCCACCAGGTCCATGGAGGTTGTGAGTCACCATGTGGTTGCTaGGAATTGAACTCAAGACCTCATGCAGCATTTCAACAAGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RGHQVHGGCESPCGC*ELNSRPHAAFQQGG Trigger: TCCACCTTGTTGAAATGCTGCATGAGGTCTTGAGTTCAATTCCCAGCAACCACATGGTGACTCACAACCTCCATGGACCTGGTGGCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085793.3 ENSMUST00000220215.2 |
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| CDS GCA 90 bp | AGAAGAGGCCACCAGGTCCATGGAGGTTGTGAGTCACCATGTGGTTaGTGGGAATTGAACTCAAGACCTCATGCAGCATTTCAACAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RRGHQVHGGCESPCG*WELNSRPHAAFQQG Trigger: ACCTTGTTGAAATGCTGCATGAGGTCTTGAGTTCAATTCCCAGCAACCACATGGTGACTCACAACCTCCATGGACCTGGTGGCCTCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085793.3 ENSMUST00000220215.2 |
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| CDS TCA 90 bp | TTCCTGTATAGTGGAAGTTCCTCAAGAAAGACTGTACCTGGTAAATaGGGTGAACATATGGAGCATCCTGCGAGGGTGGATATGCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FLYSGSSSRKTVPGK*GEHMEHPARVDMRG Trigger: CCCCCGCATATCCACCCTCGCAGGATGCTCCATATGTTCACCTCATTTACCAGGTACAGTCTTTCTTGAGGAACTTCCACTATACAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| CDS-3UTR CAA 90 bp | AGTTCTCCTCAAATGGTAGAGGTTAGTTTAGCACACACAAGACTCTTAGTTGGTGAAGGTTGCTGTCTATaGCCACCACCAGCCGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSPQMVEVSLAHTRLLVGEGCCL*PPPAAG Trigger: GCCAGCGGCTGGTGGTGGCAATAGACAGCAACCTTC...ACCAACTAAGAGTCTTGTGTGTGCTAAACTAACCTCTACCATTTGAGGAGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| CDS CCA 90 bp | ACTGCTGCATCGCAACCAGGTGTCGAGAGAGGATTTCCAGCTCTCTaGAAAGTGGGCACGTTTCCTTTTCTTTTTGTAAGTTCTCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TAASQPGVERGFPAL*KVGTFPFLFVSSPF Trigger: AAAGGGAGAACTTACAAAAAGAAAAGGAAACGTGCCCACTTTCCAGAGAGCTGGAAATCCTCTCTCGACACCTGGTTGCGATGCAGCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS-3UTR CAA 90 bp | CACATTGTAGTAGTATCTGGACCTCTGTCATTCAGAATTGTGTACAGGAGCAAGGTACTGAGCCTCAGCTaGCCATCGCAGAGAAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: HIVVVSGPLSFRIVYRSKVLSLS*PSQRST Trigger: TGTGCTTCTCTGCGATGGCAAGCTGAGGCTCAGTAC...CTTGCTCCTGTACACAATTCTGAATGACAGAGGTCCAGATACTACTACAATGTG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS TCA 90 bp | TCGCTTCCCTGGGCCATTTCTCTAACTATCAGACGAACAGTATACTaGCCGTATTCTGAAGAAGGAAGAAAGGCTGCTTCACTGGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SLPWAISLTIRRTVY*PYSEEGRKAASLGF Trigger: AAAGCCCAGTGAAGCAGCCTTTCTTCCTTCTTCAGAATACGGTCAGTATACTGTTCGTCTGATAGTTAGAGAAATGGCCCAGGGAAGCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS TCA 90 bp | GGCCATTTCTCTAACTATCAGACGAACAGTATACTGACCGTATTCTaGAGAAGGAAGAAAGGCTGCTTCACTGGGCTTTTGTTTCCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: GHFSNYQTNSILTVF*RRKKGCFTGLLFPY Trigger: GTAGGGAAACAAAAGCCCAGTGAAGCAGCCTTTCTTCCTTCTTCAGAATACGGTCAGTATACTGTTCGTCTGATAGTTAGAGAAATGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS-3UTR CAA 90 bp | CATGCATGTGACTCCCATGAGCACACACATACACTGCCCAAGAAGTTTACTGTCGGGACTTTTAATTTCTaGAATAAGGGCTCTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HACDSHEHTHTLPKKFTVGTFNF*NKGSSR Trigger: TCTGGAAGAGCCCTTATTCAAGAAATTAAAAGTCCC...GACAGTAAACTTCTTGGGCAGTGTATGTGTGTGCTCATGGGAGTCACATGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| CDS-3UTR CAA 90 bp | TTTATGATCCTCAAACTGGAGAATAAAAGAATACATCTGGAGGAGAGCACTCGAGAGGCCAAACATCTGTaGAACGGTACTGAGCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FMILKLENKRIHLEESTREAKHL*NGTEPQ Trigger: CTGAGGCTCAGTACCGTTCAACAGATGTTTGGCCTC...TCGAGTGCTCTCCTCCAGATGTATTCTTTTATTCTCCAGTTTGAGGATCATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS-3UTR CAA 90 bp | TCCCAAAGGCACAAGAGATTTCCTCTCTGGGTACTTTTAAAGGTAAAAGGAGGGACTGTCTGGGCAGCCTaGAAAGTTAATGGGATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SQRHKRFPLWVLLKVKGGTVWAA*KVNGMK Trigger: TTTCATCCCATTAACTTTCAAGGCTGCCCAGACAGT...CCCTCCTTTTACCTTTAAAAGTACCCAGAGAGGAAATCTCTTGTGCCTTTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS CCA 90 bp | CAGTATACTGACCGTATTCTGAAGAAGGAAGAAAGGCTGCTTCACTaGGCTTTTGTTTCCCTACAGCAATTAATAATAGTCTGTCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QYTDRILKKEERLLH*AFVSLQQLIIVCLS Trigger: TGACAGACAGACTATTATTAATTGCTGTAGGGAAACAAAAGCCCAGTGAAGCAGCCTTTCTTCCTTCTTCAGAATACGGTCAGTATACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS-3UTR CAA 90 bp | GGTGTTGCTGTTTCAGTCTTAGAACTTTGTCCTCAAAGTGACACAGTCATGAATGGGACTTTTAATTTCTaGAATAAGGGCTCTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GVAVSVLELCPQSDTVMNGTFNF*NKGSSR Trigger: TCTGGAAGAGCCCTTATTCAAGAAATTAAAAGTCCC...ATTCATGACTGTGTCACTTTGAGGACAAAGTTCTAAGACTGAAACAGCAACACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS TCA 72 bp | TGGGTGCCACACGCAGCCCCGAGGAAGGATAGGGAGTaGCTCCCTGACCTCAGAGGTCTGAGACGCCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: WVPHAAPRKDRE*LPDLRGLRRLP Trigger: TGGCAGGCGTCTCAGACCTCTGAGGTCAGGGAGTCACTCCCTATCCTTCCTCGGGGCTGCGTGTGGCACCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 72 bp | ACCCTGCGCAGTCAACACGGTCAGGACAGCATCCTTTaGGTGCCACACGCAGCCCCGAGGAAGGATAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: TLRSQHGQDSIL*VPHAAPRKDRE Trigger: CTCCCTATCCTTCCTCGGGGCTGCGTGTGGCACCCAAAGGATGCTGTCCTGACCGTGTTGACTGCGCAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 72 bp | ACTCTCCCGCCCTCCCCACCGTCCCCACAGCGTTGCTaGCAGGACAGACTGGATTCCAGAGCTTCCTGTATA | + |
|
Preference number: 6 (lower is better) Translates to: TLPPSPPSPQRC*QDRLDSRASCI Trigger: TATACAGGAAGCTCTGGAATCCAGTCTGTCCTGCCAGCAACGCTGTGGGGACGGTGGGGAGGGCGGGAGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| CDS GCA 72 bp | AGGTCTGAGACGCCTGCCATTTGCTTGCTCCTGCAGTaGTGGGACACAGCTGCCACACGGAGACAAGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RSETPAICLLLQ*WDTAATRRQAS Trigger: GGAAGCTTGTCTCCGTGTGGCAGCTGTGTCCCAGCACTGCAGGAGCAAGCAAATGGCAGGCGTCTCAGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS GCA 72 bp | CTCAGAGGTCTGAGACGCCTGCCATTTGCTTGCTCCTaGAGTGCTGGGACACAGCTGCCACACGGAGACAAG | + |
|
Preference number: 6 (lower is better) Translates to: LRGLRRLPFACS*SAGTQLPHGDK Trigger: CTTGTCTCCGTGTGGCAGCTGTGTCCCAGCACTGCAGGAGCAAGCAAATGGCAGGCGTCTCAGACCTCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS TCA 72 bp | GGAAGGATAGGGAGTGACTCCCTGACCTCAGAGGTCTaGGACGCCTGCCATTTGCTTGCTCCTGCAGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GRIGSDSLTSEV*DACHLLAPAVL Trigger: CAGCACTGCAGGAGCAAGCAAATGGCAGGCGTCTCAGACCTCTGAGGTCAGGGAGTCACTCCCTATCCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS GCA 72 bp | TGCCATTTGCTTGCTCCTGCAGTGCTGGGACACAGCTaGCACACGGAGACAAGCTTCCTGTGCTGGATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: CHLLAPAVLGHS*HTETSFLCWMA Trigger: TGCCATCCAGCACAGGAAGCTTGTCTCCGTGTGGCAGCTGTGTCCCAGCACTGCAGGAGCAAGCAAATGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 72 bp | TCTGAGACGCCTGCCATTTGCTTGCTCCTGCAGTGCTaGGACACAGCTGCCACACGGAGACAAGCTTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SETPAICLLLQC*DTAATRRQASC Trigger: ACAGGAAGCTTGTCTCCGTGTGGCAGCTGTGTCCCAGCACTGCAGGAGCAAGCAAATGGCAGGCGTCTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 72 bp | CAACCTGCGAGTTCCCGGTGGCTTCGATGGAGCGGATaGAGCAATTCACAGGAAACACTGGGCAGAAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: QPASSRWLRWSG*SNSQETLGRRS Trigger: GCTCCTTCTGCCCAGTGTTTCCTGTGAATTGCTCCATCCGCTCCATCGAAGCCACCGGGAACTCGCAGGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CAA 90 bp | GGAGCATCCTGCGAGGGTGGATATGCGGGGGCGACGCGCTTCTCCTaGTGTAGAAAACCCGTGAGTTCAGAAAGATACTGCTGCATCGCA | + |
|
Preference number: 6 (lower is better) Translates to: GASCEGGYAGATRFS*CRKPVSSERYCCIA Trigger: TGCGATGCAGCAGTATCTTTCTGAACTCACGGGTTTTCTACACAAGGAGAAGCGCGTCGCCCCCGCATATCCACCCTCGCAGGATGCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS TCA 72 bp | GGCCAGGCCCCAGGTTGGATGGACTGCTTGGTTCAGTaGGTTCAGTCCTGTCCTAGGCAGTTTTCCGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GQAPGWMDCLVQ*VQSCPRQFSVS Trigger: GGAAACGGAAAACTGCCTAGGACAGGACTGAACTCACTGAACCAAGCAGTCCATCCAACCTGGGGCCTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS GCA 72 bp | AGCTTATGGAGTGGAAGTTCGGTGGCTATAGCAACCTaGGAGTTCCCGGTGGCTTCGATGGAGCGGATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SLWSGSSVAIAT*EFPVASMERME Trigger: CTCCATCCGCTCCATCGAAGCCACCGGGAACTCGCAGGTTGCTATAGCCACCGAACTTCCACTCCATAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 72 bp | CGATTCCCATCAGTCCAGGCCAGGCCCCAGGTTGGATaGACTGCTTGGTTCAGTGAGTTCAGTCCTGTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: RFPSVQARPQVG*TAWFSEFSPVL Trigger: TAGGACAGGACTGAACTCACTGAACCAAGCAGTCCATCCAACCTGGGGCCTGGCCTGGACTGATGGGAATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 72 bp | TCAGTCCAGGCCAGGCCCCAGGTTGGATGGACTGCTTaGTTCAGTGAGTTCAGTCCTGTCCTAGGCAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SVQARPQVGWTA*FSEFSPVLGSF Trigger: AAAACTGCCTAGGACAGGACTGAACTCACTGAACCAAGCAGTCCATCCAACCTGGGGCCTGGCCTGGACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CAA 72 bp | TGCGAGGGTGGATATGCGGGGGCGACGCGCTTCTCCTaGTGTAGAAAACCCGTGAGTTCAGAAAGATACTGC | + |
|
Preference number: 6 (lower is better) Translates to: CEGGYAGATRFS*CRKPVSSERYC Trigger: GCAGTATCTTTCTGAACTCACGGGTTTTCTACACAAGGAGAAGCGCGTCGCCCCCGCATATCCACCCTCGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS TCA 72 bp | CAACAAGGTGGAGGCCAAACATCTGTTGAACGGTACTaGGCCTCAGCTTGCCATCGCAGAGAAGCACAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: QQGGGQTSVERY*ASACHRREAQL Trigger: GAGCTGTGCTTCTCTGCGATGGCAAGCTGAGGCTCAGTACCGTTCAACAGATGTTTGGCCTCCACCTTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085793.3 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS GCA 72 bp | CCATCTTGGTGGACGTTAGGAAAAATGGAGACACCCTaGGCAGTCAACACGGTCAGGACAGCATCCTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PSWWTLGKMETP*AVNTVRTASFG Trigger: CCCAAAGGATGCTGTCCTGACCGTGTTGACTGCGCAGGGTGTCTCCATTTTTCCTAACGTCCACCAAGATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 72 bp | CTACAGGGCGAGTATGAACAGAGCCATCGTCACCGTTaGGTGGACCGTCCAAGGCTTCAGATGCATTTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LQGEYEQSHRHR*VDRPRLQMHLS Trigger: GCTTAAATGCATCTGAAGCCTTGGACGGTCCACCCAACGGTGACGATGGCTCTGTTCATACTCGCCCTGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 72 bp | ATCCTGATTGTGAGAAAGAGGGCCCCTAGCTCCCTTTaGCTTGGACAGGCTGCCATCTCTTACCACGACTGT | + |
|
Preference number: 6 (lower is better) Translates to: ILIVRKRAPSSL*LGQAAISYHDC Trigger: ACAGTCGTGGTAAGAGATGGCAGCCTGTCCAAGCCAAAGGGAGCTAGGGGCCCTCTTTCTCACAATCAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS CAA 72 bp | AACTGTCCCAGATATACGAATGAAGGTTGCTGTCTATaGCCACCACCAGCCGCTGGCCATCCAGGGTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: NCPRYTNEGCCL*PPPAAGHPGSN Trigger: GTTGGACCCTGGATGGCCAGCGGCTGGTGGTGGCAATAGACAGCAACCTTCATTCGTATATCTGGGACAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CAA 90 bp | AACGCGGCCCTTGGTGTTGACGTCCACTTTTACCCTGGAACCATCTaGGTGGACGTTAGGAAAAATGGAGACACCCTGCGCAGTCAACAC | + |
|
Preference number: 6 (lower is better) Translates to: NAALGVDVHFYPGTI*VDVRKNGDTLRSQH Trigger: GTGTTGACTGCGCAGGGTGTCTCCATTTTTCCTAACGTCCACCAAGATGGTTCCAGGGTAAAAGTGGACGTCAACACCAAGGGCCGCGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CAA 90 bp | GTGGGAGTCATGCAGCATTTCAACAAGGTGGAGGCCAAACATCTGTaGAACGGTACTGAGCCTCAGCTTGCCATCGCAGAGAAGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: VGVMQHFNKVEAKHL*NGTEPQLAIAEKHS Trigger: GCTGTGCTTCTCTGCGATGGCAAGCTGAGGCTCAGTACCGTTCAACAGATGTTTGGCCTCCACCTTGTTGAAATGCTGCATGACTCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS CCA 72 bp | TTCGATGGAGCGGATGGAGCAATTCACAGGAAACACTaGGCAGAAGGAGCAGCTGTGAAGGGACTTCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: FDGADGAIHRKH*AEGAAVKGLLR Trigger: TCTCAGAAGTCCCTTCACAGCTGCTCCTTCTGCCCAGTGTTTCCTGTGAATTGCTCCATCCGCTCCATCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 72 bp | CAAGAAAGACTGTACCTGGTAAATGAGGTGAACATATaGAGCATCCTGCGAGGGTGGATATGCGGGGGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: QERLYLVNEVNI*SILRGWICGGD Trigger: GTCGCCCCCGCATATCCACCCTCGCAGGATGCTCCATATGTTCACCTCATTTACCAGGTACAGTCTTTCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| CDS CCA 72 bp | TACAGAACAAGGGTTCTGGTAAATGAGGTGAACATATaGAGCATCCTGCGAGGGTGGATATGCGGGGGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: YRTRVLVNEVNI*SILRGWICGGD Trigger: GTCGCCCCCGCATATCCACCCTCGCAGGATGCTCCATATGTTCACCTCATTTACCAGAACCCTTGTTCTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085793.3 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CAA 90 bp | ACTTCTGAGAACTGTCCCAGATATACGAATGAAGGTTGCTGTCTATaGCCACCACCAGCCGCTGGCCATCCAGGGTCCAACAAGCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: TSENCPRYTNEGCCL*PPPAAGHPGSNKHS Trigger: ACTGTGCTTGTTGGACCCTGGATGGCCAGCGGCTGGTGGTGGCAATAGACAGCAACCTTCATTCGTATATCTGGGACAGTTCTCAGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CAA 90 bp | CAAGACCTCATGCAGCATTTCAACAAGGTGGAGGCCAAACATCTGTaGAACGGTACTGAGCCTCAGCTTGCCATCGCAGAGAAGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: QDLMQHFNKVEAKHL*NGTEPQLAIAEKHS Trigger: GCTGTGCTTCTCTGCGATGGCAAGCTGAGGCTCAGTACCGTTCAACAGATGTTTGGCCTCCACCTTGTTGAAATGCTGCATGAGGTCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085793.3 ENSMUST00000220215.2 |
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| CDS TCA 72 bp | TGCAGCATTTCAACAAGGTGGAGGCCAAACATCTGTTaGACGGTACTGAGCCTCAGCTTGCCATCGCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: CSISTRWRPNIC*TVLSLSLPSQR Trigger: TCTCTGCGATGGCAAGCTGAGGCTCAGTACCGTTCAACAGATGTTTGGCCTCCACCTTGTTGAAATGCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085793.3 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 72 bp | GTGTTGACGTCCACTTTTACCCTGGAACCATCTTGGTaGACGTTAGGAAAAATGGAGACACCCTGCGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: VLTSTFTLEPSW*TLGKMETPCAV Trigger: GACTGCGCAGGGTGTCTCCATTTTTCCTAACGTCCACCAAGATGGTTCCAGGGTAAAAGTGGACGTCAACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 72 bp | GTCACACTGTCGAAACTGCCAGCCGTGTCTACATTCTaGGTAGCAAGGTTTCTGAAGACTTCAGGTGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: VTLSKLPAVSTF*VARFLKTSGGG Trigger: TCCTCCACCTGAAGTCTTCAGAAACCTTGCTACCCAGAATGTAGACACGGCTGGCAGTTTCGACAGTGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS CAA 72 bp | CTTGGTGTTGACGTCCACTTTTACCCTGGAACCATCTaGGTGGACGTTAGGAAAAATGGAGACACCCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LGVDVHFYPGTI*VDVRKNGDTLR Trigger: GCGCAGGGTGTCTCCATTTTTCCTAACGTCCACCAAGATGGTTCCAGGGTAAAAGTGGACGTCAACACCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CAA 72 bp | ATGCAGCATTTCAACAAGGTGGAGGCCAAACATCTGTaGAACGGTACTGAGCCTCAGCTTGCCATCGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: MQHFNKVEAKHL*NGTEPQLAIAE Trigger: CTCTGCGATGGCAAGCTGAGGCTCAGTACCGTTCAACAGATGTTTGGCCTCCACCTTGTTGAAATGCTGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085793.3 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS GCA 72 bp | CACCAGGTCCATGGAGGTTGTGAGTCACCATGTGGTTaGTGGGAATTGAACTCAAGACCTCATGCAGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: HQVHGGCESPCG*WELNSRPHAAF Trigger: AAATGCTGCATGAGGTCTTGAGTTCAATTCCCAGCAACCACATGGTGACTCACAACCTCCATGGACCTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085793.3 ENSMUST00000220215.2 |
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| CDS CCA 72 bp | TTGGTGTTGACGTCCACTTTTACCCTGGAACCATCTTaGTGGACGTTAGGAAAAATGGAGACACCCTGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: LVLTSTFTLEPS*WTLGKMETPCA Trigger: TGCGCAGGGTGTCTCCATTTTTCCTAACGTCCACCAAGATGGTTCCAGGGTAAAAGTGGACGTCAACACCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 72 bp | TACATTCTGGGTAGCAAGGTTTCTGAAGACTTCAGGTaGAGGACCAGGATCCTGATTGTGAGAAAGAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: YILGSKVSEDFR*RTRILIVRKRA Trigger: GGCCCTCTTTCTCACAATCAGGATCCTGGTCCTCCACCTGAAGTCTTCAGAAACCTTGCTACCCAGAATGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223551.2 |
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| CDS GCA 72 bp | TTGTGTAGAAAACCCGTGAGTTCAGAAAGATACTGCTaGATCGCAACCAGGTGTCGAGAGAGGATTTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LCRKPVSSERYC*IATRCRERISS Trigger: GCTGGAAATCCTCTCTCGACACCTGGTTGCGATGCAGCAGTATCTTTCTGAACTCACGGGTTTTCTACACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS GCA 72 bp | TCCTTGTGTAGAAAACCCGTGAGTTCAGAAAGATACTaGTGCATCGCAACCAGGTGTCGAGAGAGGATTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLCRKPVSSERY*CIATRCRERIS Trigger: GGAAATCCTCTCTCGACACCTGGTTGCGATGCAGCAGTATCTTTCTGAACTCACGGGTTTTCTACACAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CCA 72 bp | CAGGTCCATGGAGGTTGTGAGTCACCATGTGGTTGCTaGGAATTGAACTCAAGACCTCATGCAGCATTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: QVHGGCESPCGC*ELNSRPHAAFQ Trigger: TTGAAATGCTGCATGAGGTCTTGAGTTCAATTCCCAGCAACCACATGGTGACTCACAACCTCCATGGACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085793.3 ENSMUST00000220215.2 |
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| CDS TCA 72 bp | AGTGGAAGTTCCTCAAGAAAGACTGTACCTGGTAAATaGGGTGAACATATGGAGCATCCTGCGAGGGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SGSSSRKTVPGK*GEHMEHPARVD Trigger: ATCCACCCTCGCAGGATGCTCCATATGTTCACCTCATTTACCAGGTACAGTCTTTCTTGAGGAACTTCCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053034.6 |
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| CDS GCA 72 bp | ACCATGTGGTTGCTGGGAATTGAACTCAAGACCTCATaGAGCATTTCAACAAGGTGGAGGCCAAACATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TMWLLGIELKTS*SISTRWRPNIC Trigger: ACAGATGTTTGGCCTCCACCTTGTTGAAATGCTGCATGAGGTCTTGAGTTCAATTCCCAGCAACCACATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085793.3 ENSMUST00000220215.2 |
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| CDS CCA 72 bp | TCGCAACCAGGTGTCGAGAGAGGATTTCCAGCTCTCTaGAAAGTGGGCACGTTTCCTTTTCTTTTTGTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: SQPGVERGFPAL*KVGTFPFLFVS Trigger: ACTTACAAAAAGAAAAGGAAACGTGCCCACTTTCCAGAGAGCTGGAAATCCTCTCTCGACACCTGGTTGCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CAA 72 bp | ATCACTGGACAGAGGGGACAAGGGACTTTTAATTTCTaGAATAAGGGCTCTTCCAGACCTCCCACTCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: ITGQRGQGTFNF*NKGSSRPPTLS Trigger: ACTCAGAGTGGGAGGTCTGGAAGAGCCCTTATTCAAGAAATTAAAAGTCCCTTGTCCCCTCTGTCCAGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS TCA 72 bp | TCTAACTATCAGACGAACAGTATACTGACCGTATTCTaGAGAAGGAAGAAAGGCTGCTTCACTGGGCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SNYQTNSILTVF*RRKKGCFTGLL Trigger: CAAAAGCCCAGTGAAGCAGCCTTTCTTCCTTCTTCAGAATACGGTCAGTATACTGTTCGTCTGATAGTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS TCA 72 bp | TGGGCCATTTCTCTAACTATCAGACGAACAGTATACTaGCCGTATTCTGAAGAAGGAAGAAAGGCTGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: WAISLTIRRTVY*PYSEEGRKAAS Trigger: TGAAGCAGCCTTTCTTCCTTCTTCAGAATACGGTCAGTATACTGTTCGTCTGATAGTTAGAGAAATGGCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS TCA 72 bp | GGTAATTGCTTTCTTAAAGGTTACCAGGATCAAATGTaGAGAATCTTGGCCAGTTCCTGTCAAGTAGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GNCFLKGYQDQM*RILASSCQVVL Trigger: AAGGACTACTTGACAGGAACTGGCCAAGATTCTTCACATTTGATCCTGGTAACCTTTAAGAAAGCAATTACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS TCA 72 bp | AAACATATGCCCTTTGGTCTTTCATTACTCTCTAACTaGATTTGCTGGATATTTGGCATAGAAGATGGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: KHMPFGLSLLSN*ICWIFGIEDGA Trigger: CGCTCCATCTTCTATGCCAAATATCCAGCAAATTCAGTTAGAGAGTAATGAAAGACCAAAGGGCATATGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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| CDS CAA 90 bp | CTACAGCAATTAATAATAGTCTGTCTGTCAAGAAACATATGCCCTTaGGTCTTTCATTACTCTCTAACTGAATTTGCTGGATATTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LQQLIIVCLSRNICP*VFHYSLTEFAGYLA Trigger: TGCCAAATATCCAGCAAATTCAGTTAGAGAGTAATGAAAGACCAAAGGGCATATGTTTCTTGACAGACAGACTATTATTAATTGCTGTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053034.6 ENSMUST00000085793.3 ENSMUST00000220170.2 ENSMUST00000220215.2 ENSMUST00000223551.2 |
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