Pregenerated sensors for WBP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022023Ensembl transcript IDs: ENSMUST00000022601.7, ENSMUST00000227584.2
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTCAACCCTTGGTCCAGCTGTCACTCTGCACGTCAGTGCTCAGGTaGGTCCTTCTCCTGGTCTTCCGTCCTAAATGGAGTAAGACAAGC | + |
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Preference number: 1 (lower is better) Translates to: FQPLVQLSLCTSVLR*VLLLVFRPKWSKTS Trigger: GCTTGTCTTACTCCATTTAGGACGGAAGACCAGGAGAAGGACGCACCTGAGCACTGACGTGCAGAGTGACAGCTGGACCAAGGGTTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| 3UTR TCA 90 bp | CCCCATGTTAAAATGGTTGTAAGATACTACAGCTATCAGCTGATCTaGGGCAAGCACAGGTTTCAACCCTTGGTCCAGCTGTCACTCTGC | + |
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Preference number: 1 (lower is better) Translates to: PHVKMVVRYYSYQLI*GKHRFQPLVQLSLC Trigger: GCAGAGTGACAGCTGGACCAAGGGTTGAAACCTGTGCTTGCCTCAGATCAGCTGATAGCTGTAGTATCTTACAACCATTTTAACATGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| 3UTR CCA 90 bp | ATCTTCAGCCAAGCTACTTTAGGAGGGAGTTGTTCCAGACTAGCCTaGCAGACAAGAGGGTCTCAAACAAAACAAAACCAACAATACTCG | + |
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Preference number: 1 (lower is better) Translates to: IFSQATLGGSCSRLA*QTRGSQTKQNQQYS Trigger: CGAGTATTGTTGGTTTTGTTTTGTTTGAGACCCTCTTGTCTGCCAGGCTAGTCTGGAACAACTCCCTCCTAAAGTAGCTTGGCTGAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| 3UTR-3UTR GCA 90 bp | CCACAGCTTCACAGAGCACAGAGCAGCTTGGAAAGGACACCCCTTCCATCCATAGGCCACTCCATCTGCTaGAACTCCCAGAGAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: PQLHRAQSSLERTPLPSIGHSIC*NSQRRN Trigger: GTTTCTTCTCTGGGAGTTGCAGCAGATGGAGTGGCC...TATGGATGGAAGGGGTGTCCTTTCCAAGCTGCTCTGTGCTCTGTGAAGCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227584.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGCACAGGAGCTTGGAAAGGACACACCTCCTCTCCACAGCTTCACAGAGCACCAAAGCACAGGAGCTTaGAAAGGACACACCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: KAQELGKDTPPLHSFTEHQSTGA*KGHTSS Trigger: AGAGGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTTG...GTGCTCTGTGAAGCTGTGGAGAGGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| 3UTR-3UTR CCA 90 bp | GCCACCATGTGGTTGCTGGGATTTAAACTCAGGACCTTTAGTAGAGCAGTCAGTGAGCACAGAGCAGCTTaGAAAGGACACCCCTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: ATMWLLGFKLRTFSRAVSEHRAA*KGHPFH Trigger: ATGGAAGGGGTGTCCTTTCCAAGCTGCTCTGTGCTC...ACTGACTGCTCTACTAAAGGTCCTGAGTTTAAATCCCAGCAACCACATGGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| 3UTR-3UTR CCA 90 bp | TATTCAAAGCACAGGAGCTTGGAAAGGACACACCTCCTCTCCACAGCTTCACAGCAAAGCACAGGAGCTTaGAAAGGACACACCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: YSKHRSLERTHLLSTASQQSTGA*KGHTSS Trigger: AGAGGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTTG...CTGTGAAGCTGTGGAGAGGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTTGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| 3UTR-3UTR CCA 90 bp | GCCACCATGTGGTTGCTGGGATTTAAACTCAGGACCTTTAGTAGAGCAGTCAGTAAAAGGATGCCGGACTaGGAAAGGGCTGTGCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: ATMWLLGFKLRTFSRAVSKRMPD*ERAVPE Trigger: TTCTGGCACAGCCCTTTCCCAGTCCGGCATCCTTTT...ACTGACTGCTCTACTAAAGGTCCTGAGTTTAAATCCCAGCAACCACATGGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| 3UTR-3UTR GCA 90 bp | CAGCTTCACAGAGCACAGAGCAGCTTGGAAAGGACACCCCTTCCATCCATAGCTGACATTCCCCTTCAGTaGTTGGAAGTTCCAAATCAA | + |
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Preference number: 2 (lower is better) Translates to: QLHRAQSSLERTPLPSIADIPLQ*LEVPNQ Trigger: TTGATTTGGAACTTCCAAGCACTGAAGGGGAATGTC...AGCTATGGATGGAAGGGGTGTCCTTTCCAAGCTGCTCTGTGCTCTGTGAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227584.2 |
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| 3UTR-3UTR CCA 90 bp | CACGCCAACAATCCCAGAACTAAGGTTTTAGGCAGGAGGGTAACTGCAAGTTTGACAGGTTTCAACCCTTaGTCCAGCTGTCACTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: HANNPRTKVLGRRVTASLTGFNP*SSCHSA Trigger: TGCAGAGTGACAGCTGGACCAAGGGTTGAAACCTGT...CAAACTTGCAGTTACCCTCCTGCCTAAAACCTTAGTTCTGGGATTGTTGGCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| 3UTR-3UTR GCA 90 bp | AAAGCACAGGAGCTTGGAAAGGACACACCTCCTCTCCACAGCTTCACAGAGCACTACACTGTATTACAATaGAATGTGGTAGGCTACCAC | + |
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Preference number: 2 (lower is better) Translates to: KAQELGKDTPPLHSFTEHYTVLQ*NVVGYH Trigger: GTGGTAGCCTACCACATTGCATTGTAATACAGTGTA...GTGCTCTGTGAAGCTGTGGAGAGGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| 3UTR-3UTR GCA 90 bp | CTATTAAAAACTGAAAAACAGATCATGGCTCCATTGGTGCTTGCTCAGTCTAGCCACTCTGCACGTCAGTaGTCAGGTGCGTCCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LLKTEKQIMAPLVLAQSSHSARQ*SGASFS Trigger: GGAGAAGGACGCACCTGAGCACTGACGTGCAGAGTG...GCTAGACTGAGCAAGCACCAATGGAGCCATGATCTGTTTTTCAGTTTTTAATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| 3UTR-3UTR CCA 90 bp | CAGCTTCTGAAGTTGATAGACATTCCCCTTCAGTGCTTGGAAGTTCCAAATCAAGAGCACAGAGCAGCTTaGAAAGGACACCCCTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: QLLKLIDIPLQCLEVPNQEHRAA*KGHPFH Trigger: ATGGAAGGGGTGTCCTTTCCAAGCTGCTCTGTGCTC...TTGATTTGGAACTTCCAAGCACTGAAGGGGAATGTCTATCAACTTCAGAAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227584.2 |
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| 3UTR-3UTR CCA 90 bp | CTATTAAAAACTGAAAAACAGATCATGGCTCCATTGGTGCTTGCTCAGTCTAGCGGTGCGTCCTTCTCCTaGTCTTCCGTCCTAAATGGA | + |
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Preference number: 2 (lower is better) Translates to: LLKTEKQIMAPLVLAQSSGASFS*SSVLNG Trigger: TCCATTTAGGACGGAAGACCAGGAGAAGGACGCACC...GCTAGACTGAGCAAGCACCAATGGAGCCATGATCTGTTTTTCAGTTTTTAATAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| 3UTR CAA 90 bp | ACATTCCCCTTCAGTGCTTGGAAGTTCCAAATCAACTTCTTCTCTTaGGGACGATCCATAGCCCACTTCTGTTCTGTGAGCATTTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: TFPFSAWKFQINFFS*GRSIAHFCSVSISF Trigger: AAAGGAAATGCTCACAGAACAGAAGTGGGCTATGGATCGTCCCAAAGAGAAGAAGTTGATTTGGAACTTCCAAGCACTGAAGGGGAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227584.2 |
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| 3UTR-3UTR TCA 90 bp | TTGATAGACATTCCCCTTCAGTGCTTGGAAGTTCCAAATCAACTTCTTCTCTTTCCCACTTCTGTTCTGTaGGCATTTCCTTTGAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LIDIPLQCLEVPNQLLLFPTSVL*AFPLKA Trigger: GGCCTTCAAAGGAAATGCTCACAGAACAGAAGTGGG...AAAGAGAAGAAGTTGATTTGGAACTTCCAAGCACTGAAGGGGAATGTCTATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227584.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTTGTTCCAGACTAGCCTGGCAGACAAGAGGGTCTCAAACAAAACAAAACCAAATGGAACCAGAAAATaGGGAACATCTAAGTGGACA | + |
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Preference number: 2 (lower is better) Translates to: ELFQTSLADKRVSNKTKPNGTRK*GTSKWT Trigger: TGTCCACTTAGATGTTCCCCATTTTCTGGTTCCATT...TGGTTTTGTTTTGTTTGAGACCCTCTTGTCTGCCAGGCTAGTCTGGAACAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| 3UTR-3UTR CCA 90 bp | CTATTAAAAACTGAAAAACAGATCATGGCTCCATTGGTGCTTGCTCAGTCTAGCGTAGCTCTGGGGAAGTaGAAAACAGGAGAGTCACAA | + |
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Preference number: 2 (lower is better) Translates to: LLKTEKQIMAPLVLAQSSVALGK*KTGESQ Trigger: TTGTGACTCTCCTGTTTTCCACTTCCCCAGAGCTAC...GCTAGACTGAGCAAGCACCAATGGAGCCATGATCTGTTTTTCAGTTTTTAATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| 3UTR CAA 90 bp | TTTCTACATCCAGGCTTCAGAAAGGACTGTCAAAACCACATTGTCTaGGGGCTGTGTCTGATTTCTTACTTCTCAGGTAACAAGTTAATT | + |
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Preference number: 2 (lower is better) Translates to: FLHPGFRKDCQNHIV*GLCLISYFSGNKLI Trigger: AATTAACTTGTTACCTGAGAAGTAAGAAATCAGACACAGCCCCAAGACAATGTGGTTTTGACAGTCCTTTCTGAAGCCTGGATGTAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| 3UTR GCA 72 bp | TTGGTCCAGCTGTCACTCTGCACGTCAGTGCTCAGGTaGGTCCTTCTCCTGGTCTTCCGTCCTAAATGGAGT | + |
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Preference number: 3 (lower is better) Translates to: LVQLSLCTSVLR*VLLLVFRPKWS Trigger: ACTCCATTTAGGACGGAAGACCAGGAGAAGGACGCACCTGAGCACTGACGTGCAGAGTGACAGCTGGACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| 3UTR-3UTR CAA 90 bp | CACGCCAACAATCCCAGAACTAAGGTTTTAGGCAGGAGGGTAACTGCAAGTTTGCACAGGTTTCAACCCTaGGTCCAGCTGTCACTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: HANNPRTKVLGRRVTASLHRFQP*VQLSLC Trigger: GCAGAGTGACAGCTGGACCAAGGGTTGAAACCTGTG...CAAACTTGCAGTTACCCTCCTGCCTAAAACCTTAGTTCTGGGATTGTTGGCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| 3UTR-3UTR CAA 90 bp | AAAGCACAGGAGCTTGGAAAGGACACACCTCCTCTCCACAGCTTCACAGAGCACTCAAGTCTTCTCTTTTaGAAGACTGGGGCCACTCCA | + |
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Preference number: 3 (lower is better) Translates to: KAQELGKDTPPLHSFTEHSSLLF*KTGATP Trigger: TGGAGTGGCCCCAGTCTTCAAAAAGAGAAGACTTGA...GTGCTCTGTGAAGCTGTGGAGAGGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227584.2 |
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| 3UTR CCA 72 bp | TTCAGACACACCAGAAGAGGGTGTCAGCTCTCATTATaGGTGATTGTGAGCCACCATGTGGTTGCTGGGATT | + |
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Preference number: 3 (lower is better) Translates to: FRHTRRGCQLSL*VIVSHHVVAGI Trigger: AATCCCAGCAACCACATGGTGGCTCACAATCACCCATAATGAGAGCTGACACCCTCTTCTGGTGTGTCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| 3UTR-3UTR CAA 90 bp | AGGCTTCAGAAAGGACTGTCAAAACCACATTGTCTTGGGGCTGTGTCTGATTTCTCAAAGCACAGGAGCTaGGAAAGGACACACCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: RLQKGLSKPHCLGAVSDFSKHRS*ERTHLL Trigger: GAGGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTTGA...GAAATCAGACACAGCCCCAAGACAATGTGGTTTTGACAGTCCTTTCTGAAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| 3UTR-3UTR CAA 90 bp | CGTCGTCACCTCGCTGTCTTAAGTTTCGAGATTTTCCATTTTCAAGTCTTCTCTTCAAAGCACAGGAGCTaGGAAAGGACACACCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: RRHLAVLSFEIFHFQVFSSKHRS*ERTHLL Trigger: GAGGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTTGA...AGAGAAGACTTGAAAATGGAAAATCTCGAAACTTAAGACAGCGAGGTGACGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227584.2 |
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| 3UTR GCA 72 bp | GCTCTCATTATGGGTGATTGTGAGCCACCATGTGGTTaGTGGGATTTAAACTCAGGACCTTTAGTAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: ALIMGDCEPPCG*WDLNSGPLVEQ Trigger: CTGCTCTACTAAAGGTCCTGAGTTTAAATCCCAGCAACCACATGGTGGCTCACAATCACCCATAATGAGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| 3UTR CCA 72 bp | AAAATGCAGCACTACAGTATTCAAAGCACAGGAGCTTaGAAAGGACACACCTCCTCTCCACAGCTTCACAGA | + |
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Preference number: 3 (lower is better) Translates to: KMQHYSIQSTGA*KGHTSSPQLHR Trigger: TCTGTGAAGCTGTGGAGAGGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTTGAATACTGTAGTGCTGCATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| 3UTR TCA 72 bp | AAAATGGTTGTAAGATACTACAGCTATCAGCTGATCTaGGGCAAGCACAGGTTTCAACCCTTGGTCCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: KMVVRYYSYQLI*GKHRFQPLVQL Trigger: CAGCTGGACCAAGGGTTGAAACCTGTGCTTGCCTCAGATCAGCTGATAGCTGTAGTATCTTACAACCATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| 3UTR CCA 72 bp | CTCATTATGGGTGATTGTGAGCCACCATGTGGTTGCTaGGATTTAAACTCAGGACCTTTAGTAGAGCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: LIMGDCEPPCGC*DLNSGPLVEQS Trigger: TGACTGCTCTACTAAAGGTCCTGAGTTTAAATCCCAGCAACCACATGGTGGCTCACAATCACCCATAATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| 3UTR CCA 72 bp | CAAGCTACTTTAGGAGGGAGTTGTTCCAGACTAGCCTaGCAGACAAGAGGGTCTCAAACAAAACAAAACCAA | + |
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Preference number: 3 (lower is better) Translates to: QATLGGSCSRLA*QTRGSQTKQNQ Trigger: TTGGTTTTGTTTTGTTTGAGACCCTCTTGTCTGCCAGGCTAGTCTGGAACAACTCCCTCCTAAAGTAGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| 3UTR-3UTR CAA 90 bp | GAGTTGTTCCAGACTAGCCTGGCAGACAAGAGGGTCTCAAACAAAACAAAACCATTAATTCCAGTGTTCTaGAGTACTCTTAGGCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: ELFQTSLADKRVSNKTKPLIPVF*STLRPE Trigger: CTCTGGCCTAAGAGTACTCAAGAACACTGGAATTAA...TGGTTTTGTTTTGTTTGAGACCCTCTTGTCTGCCAGGCTAGTCTGGAACAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| CDS-3UTR CCA 90 bp | CCACAGCTTCACAGAGCACAGAGCAGCTTGGAAAGGACACCCCTTCCATCCATAGGGCGGCTGCCTCCATaGCAGCAAACTCCTTGGATG | + |
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Preference number: 4 (lower is better) Translates to: PQLHRAQSSLERTPLPSIGRLPP*QQTPWM Trigger: CATCCAAGGAGTTTGCTGCCATGGAGGCAGCCGCCC...TATGGATGGAAGGGGTGTCCTTTCCAAGCTGCTCTGTGCTCTGTGAAGCTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| CDS-3UTR GCA 90 bp | GCCAGAGGATCTGGACTTGAGGTTAGTCTTCAAGGGCAACACAGCAAAACTCTTCGCCTTCAGGGCGGCTaGCTCCATGGCAGCAAACTC | + |
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Preference number: 4 (lower is better) Translates to: ARGSGLEVSLQGQHSKTLRLQGG*LHGSKL Trigger: GAGTTTGCTGCCATGGAGGCAGCCGCCCTGAAGGCG...AAGAGTTTTGCTGTGTTGCCCTTGAAGACTAACCTCAAGTCCAGATCCTCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| CDS-3UTR CCA 90 bp | TATTCAAAGCACAGGAGCTTGGAAAGGACACACCTCCTCTCCACAGCTTCACAGGGGCGGCTGCCTCCATaGCAGCAAACTCCTTGGATG | + |
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Preference number: 4 (lower is better) Translates to: YSKHRSLERTHLLSTASQGRLPP*QQTPWM Trigger: CATCCAAGGAGTTTGCTGCCATGGAGGCAGCCGCCC...CTGTGAAGCTGTGGAGAGGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTTGAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| CDS-3UTR GCA 90 bp | AAAGCACAGGAGCTTGGAAAGGACACACCTCCTCTCCACAGCTTCACAGAGCACGGCCACTCCATCTGCTaGAACTCCCAGAGAAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: KAQELGKDTPPLHSFTEHGHSIC*NSQRRN Trigger: GTTTCTTCTCTGGGAGTTGCAGCAGATGGAGTGGCC...GTGCTCTGTGAAGCTGTGGAGAGGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| CDS-3UTR GCA 90 bp | GCCACCATGTGGTTGCTGGGATTTAAACTCAGGACCTTTAGTAGAGCAGTCAGTTGGGGCCACTCCATCTaGTGCAACTCCCAGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: ATMWLLGFKLRTFSRAVSWGHSI*CNSQRR Trigger: TCTTCTCTGGGAGTTGCAGCAGATGGAGTGGCCCCA...ACTGACTGCTCTACTAAAGGTCCTGAGTTTAAATCCCAGCAACCACATGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| CDS-3UTR CCA 90 bp | GCCACCATGTGGTTGCTGGGATTTAAACTCAGGACCTTTAGTAGAGCAGTCAGTGACGTAGGGGTGGGTTaGACAGTGCTGATGACTGGT | + |
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Preference number: 4 (lower is better) Translates to: ATMWLLGFKLRTFSRAVSDVGVG*TVLMTG Trigger: ACCAGTCATCAGCACTGTCCAACCCACCCCTACGTC...ACTGACTGCTCTACTAAAGGTCCTGAGTTTAAATCCCAGCAACCACATGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| 3UTR CAA 72 bp | CTTGAGCCGGCTCACCAGTCCTTAATTCCAGTGTTCTaGAGTACTCTTAGGCCAGAGGATCTGGACTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: LEPAHQSLIPVF*STLRPEDLDLR Trigger: CCTCAAGTCCAGATCCTCTGGCCTAAGAGTACTCAAGAACACTGGAATTAAGGACTGGTGAGCCGGCTCAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| CDS-3UTR TCA 90 bp | CCACAGCTTCACAGAGCACAGAGCAGCTTGGAAAGGACACCCCTTCCATCCATAGAATTTCTTTGGTTGTaGCTTCCAGTAGTCGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: PQLHRAQSSLERTPLPSIEFLWL*LPVVGH Trigger: ATGGCCGACTACTGGAAGTCACAACCAAAGAAATTC...TATGGATGGAAGGGGTGTCCTTTCCAAGCTGCTCTGTGCTCTGTGAAGCTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| CDS-3UTR TCA 90 bp | TATTCAAAGCACAGGAGCTTGGAAAGGACACACCTCCTCTCCACAGCTTCACAGTCTGGCTTCTCCCATTaGGATGCTCCTGTGATGAGA | + |
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Preference number: 4 (lower is better) Translates to: YSKHRSLERTHLLSTASQSGFSH*DAPVMR Trigger: TCTCATCACAGGAGCATCTCAATGGGAGAAGCCAGA...CTGTGAAGCTGTGGAGAGGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTTGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| CDS-3UTR TCA 90 bp | CCAACGCCAGCTTCTGAAGTTGATAGACATTCCCCTTCAGTGCTTGGAAGTTCCTCTGGCTTCTCCCATTaGGATGCTCCTGTGATGAGA | + |
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Preference number: 4 (lower is better) Translates to: PTPASEVDRHSPSVLGSSSGFSH*DAPVMR Trigger: TCTCATCACAGGAGCATCTCAATGGGAGAAGCCAGA...GGAACTTCCAAGCACTGAAGGGGAATGTCTATCAACTTCAGAAGCTGGCGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227584.2 |
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| CDS-3UTR GCA 90 bp | CAGCTTCACAGAGCACAGAGCAGCTTGGAAAGGACACCCCTTCCATCCATAGCTACTAGGCCTATTGTCTaGTATCCAGCACTTGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: QLHRAQSSLERTPLPSIATRPIV*YPALAV Trigger: TACTGCAAGTGCTGGATAGCAGACAATAGGCCTAGT...AGCTATGGATGGAAGGGGTGTCCTTTCCAAGCTGCTCTGTGCTCTGTGAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| CDS-3UTR CCA 90 bp | AAAGCACAGGAGCTTGGAAAGGACACACCTCCTCTCCACAGCTTCACAGAGCACTGGCAGCAAACTCCTTaGATGCCTTTTCTTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: KAQELGKDTPPLHSFTEHWQQTP*MPFLLP Trigger: AGGAAGAAGAAAAGGCATCCAAGGAGTTTGCTGCCA...GTGCTCTGTGAAGCTGTGGAGAGGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| CDS-3UTR CCA 90 bp | TATTCAAAGCACAGGAGCTTGGAAAGGACACACCTCCTCTCCACAGCTTCACAGCACATCCCCGCCATGTaGGATGAAATCTTCAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: YSKHRSLERTHLLSTASQHIPAM*DEIFRL Trigger: AAGCCTGAAGATTTCATCCCACATGGCGGGGATGTG...CTGTGAAGCTGTGGAGAGGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTTGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| CDS-3UTR CCA 90 bp | GGTTTTAGGCAGGAGGGTAACTGCAAGTTTGAAGGCAGCCAGATATGCATGGTGTCTCTTTTTGAAGACTaGGGCCACTCCATCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GFRQEGNCKFEGSQICMVSLFED*GHSICC Trigger: GCAGCAGATGGAGTGGCCCCAGTCTTCAAAAAGAGA...CACCATGCATATCTGGCTGCCTTCAAACTTGCAGTTACCCTCCTGCCTAAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| CDS-3UTR GCA 90 bp | CAGCTTCACAGAGCACAGAGCAGCTTGGAAAGGACACCCCTTCCATCCATAGCTCTTCTCCCATTGAGATaGTCCTGTGATGAGATCATA | + |
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Preference number: 4 (lower is better) Translates to: QLHRAQSSLERTPLPSIALLPLR*SCDEII Trigger: TATGATCTCATCACAGGAGCATCTCAATGGGAGAAG...AGCTATGGATGGAAGGGGTGTCCTTTCCAAGCTGCTCTGTGCTCTGTGAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| CDS-3UTR CCA 90 bp | AGTATTCAAAGCACAGGAGCTTGGAAAGGACACACCTCCTCTCCACAGCTTCACCCCTTGAAATCCTTCTaGCTTCTCCCATTGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SIQSTGAWKGHTSSPQLHPLKSF*LLPLRC Trigger: GCATCTCAATGGGAGAAGCCAGAAGGATTTCAAGGG...GTGAAGCTGTGGAGAGGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTTGAATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
||
| CDS-3UTR TCA 90 bp | CCACAGCTTCACAGAGCACAGAGCAGCTTGGAAAGGACACCCCTTCCATCCATATTTTTCAAATTCCCTTaGAATCCTTCTGGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PQLHRAQSSLERTPLPSIFFKFP*NPSGFS Trigger: GGAGAAGCCAGAAGGATTTCAAGGGAATTTGAAAAA...TATGGATGGAAGGGGTGTCCTTTCCAAGCTGCTCTGTGCTCTGTGAAGCTGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
||
| CDS-3UTR GCA 90 bp | CAGCTTCACAGAGCACAGAGCAGCTTGGAAAGGACACCCCTTCCATCCATAGCTTACCCAAACGGCCTTTaGTGCTGTCTTTTTCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: QLHRAQSSLERTPLPSIAYPNGL*CCLFQI Trigger: AATTTGAAAAAGACAGCAGCAAAGGCCGTTTGGGTA...AGCTATGGATGGAAGGGGTGTCCTTTCCAAGCTGCTCTGTGCTCTGTGAAGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGGGAAGTGGAAAACAGGAGAGTCACAAGTTTAAGGTCATCTTCAGCCAAGCACATCCCCGCCATGTaGGATGAAATCTTCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGEVENRRVTSLRSSSAKHIPAM*DEIFRL Trigger: AAGCCTGAAGATTTCATCCCACATGGCGGGGATGTG...CTTGGCTGAAGATGACCTTAAACTTGTGACTCTCCTGTTTTCCACTTCCCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
||
| CDS-3UTR GCA 90 bp | CCAACGCCAGCTTCTGAAGTTGATAGACATTCCCCTTCAGTGCTTGGAAGTTCCCTTCTCCCATTGAGATaGTCCTGTGATGAGATCATA | + |
|
Preference number: 4 (lower is better) Translates to: PTPASEVDRHSPSVLGSSLLPLR*SCDEII Trigger: TATGATCTCATCACAGGAGCATCTCAATGGGAGAAG...GGAACTTCCAAGCACTGAAGGGGAATGTCTATCAACTTCAGAAGCTGGCGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227584.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTTCAGTGCTTGGAAGTTCCAAATCAACTTCTTCTCTTTGGGACGATCCATCCCTTGAAATCCTTCTaGCTTCTCCCATTGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: PLQCLEVPNQLLLFGTIHPLKSF*LLPLRC Trigger: GCATCTCAATGGGAGAAGCCAGAAGGATTTCAAGGG...ATGGATCGTCCCAAAGAGAAGAAGTTGATTTGGAACTTCCAAGCACTGAAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227584.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCTGAAGTTGATAGACATTCCCCTTCAGTGCTTGGAAGTTCCAAATCAAGCTTCTTGGTCTCTGTaGAGGCCTCTCCAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLLKLIDIPLQCLEVPNQASWSL*RPLQLS Trigger: AGAAAGCTGGAGAGGCCTCCACAGAGACCAAGAAGC...TTGATTTGGAACTTCCAAGCACTGAAGGGGAATGTCTATCAACTTCAGAAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227584.2 |
||
| 3UTR CAA 72 bp | GTGTTCTTGAGTACTCTTAGGCCAGAGGATCTGGACTaGAGGTTAGTCTTCAAGGGCAACACAGCAAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: VFLSTLRPEDLD*RLVFKGNTAKL Trigger: GAGTTTTGCTGTGTTGCCCTTGAAGACTAACCTCAAGTCCAGATCCTCTGGCCTAAGAGTACTCAAGAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
||
| CDS-3UTR CCA 90 bp | AAAATGCAGCACTACAGTATTCAAAGCACAGGAGCTTGGAAAGGACACACCTCCTGGCAGCAAACTCCTTaGATGCCTTTTCTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KMQHYSIQSTGAWKGHTSWQQTP*MPFLLP Trigger: AGGAAGAAGAAAAGGCATCCAAGGAGTTTGCTGCCA...GGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTTGAATACTGTAGTGCTGCATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
||
| 3UTR CAA 72 bp | CCAGGCTTCAGAAAGGACTGTCAAAACCACATTGTCTaGGGGCTGTGTCTGATTTCTTACTTCTCAGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PGFRKDCQNHIV*GLCLISYFSGN Trigger: GTTACCTGAGAAGTAAGAAATCAGACACAGCCCCAAGACAATGTGGTTTTGACAGTCCTTTCTGAAGCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
||
| 3UTR CAA 72 bp | TTCAGTGCTTGGAAGTTCCAAATCAACTTCTTCTCTTaGGGACGATCCATAGCCCACTTCTGTTCTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSAWKFQINFFS*GRSIAHFCSVS Trigger: GCTCACAGAACAGAAGTGGGCTATGGATCGTCCCAAAGAGAAGAAGTTGATTTGGAACTTCCAAGCACTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227584.2 |
||
| CDS-3UTR GCA 90 bp | CACGCCAACAATCCCAGAACTAAGGTTTTAGGCAGGAGGGTAACTGCAAGTTTGCTGCTATCCAGCACTTaGAGTAATCACAGAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HANNPRTKVLGRRVTASLLLSST*SNHRIS Trigger: AGAAATTCTGTGATTACTGCAAGTGCTGGATAGCAG...CAAACTTGCAGTTACCCTCCTGCCTAAAACCTTAGTTCTGGGATTGTTGGCGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
||
| CDS-3UTR TCA 90 bp | GCTTCTGAAGTTGATAGACATTCCCCTTCAGTGCTTGGAAGTTCCAAATCAACTGAATTTCTTTGGTTGTaGCTTCCAGTAGTCGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASEVDRHSPSVLGSSKSTEFLWL*LPVVGH Trigger: ATGGCCGACTACTGGAAGTCACAACCAAAGAAATTC...AGTTGATTTGGAACTTCCAAGCACTGAAGGGGAATGTCTATCAACTTCAGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227584.2 |
||
| CDS-3UTR GCA 90 bp | CAACTTCTTCTCTTTGGGACGATCCATAGCCCACTTCTGTTCTGTGAGCATTTCTACCCAAACGGCCTTTaGTGCTGTCTTTTTCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: QLLLFGTIHSPLLFCEHFYPNGL*CCLFQI Trigger: AATTTGAAAAAGACAGCAGCAAAGGCCGTTTGGGTA...GAAATGCTCACAGAACAGAAGTGGGCTATGGATCGTCCCAAAGAGAAGAAGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227584.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGGGAAGTGGAAAACAGGAGAGTCACAAGTTTAAGGTCATCTTCAGCCAAGCAGGCTTTTCCCATTTaGATTCTCCTGTTTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SGEVENRRVTSLRSSSAKQAFPI*ILLFLY Trigger: ATACAGAAACAGGAGAATCCAAATGGGAAAAGCCTG...CTTGGCTGAAGATGACCTTAAACTTGTGACTCTCCTGTTTTCCACTTCCCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
||
| CDS-3UTR CCA 90 bp | ACATTGAACATAATACACTGTATTACAATGCAATGTGGTAGGCTACCACTTAAGGCTTCTTGGTCTCTGTaGAGGCCTCTCCAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLNIIHCITMQCGRLPLKASWSL*RPLQLS Trigger: AGAAAGCTGGAGAGGCCTCCACAGAGACCAAGAAGC...CTTAAGTGGTAGCCTACCACATTGCATTGTAATACAGTGTATTATGTTCAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
||
| CDS-3UTR GCA 90 bp | CAGCTTCTGAAGTTGATAGACATTCCCCTTCAGTGCTTGGAAGTTCCAAATCAACTGCTATCCAGCACTTaGAGTAATCACAGAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLLKLIDIPLQCLEVPNQLLSST*SNHRIS Trigger: AGAAATTCTGTGATTACTGCAAGTGCTGGATAGCAG...TTGATTTGGAACTTCCAAGCACTGAAGGGGAATGTCTATCAACTTCAGAAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227584.2 |
||
| CDS-3UTR GCA 90 bp | GAAGAAATGGAACCAGAAAATGGGGAACATCTAAGTGGACAACACAACCTATTTACTAGGCCTATTGTCTaGTATCCAGCACTTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: EEMEPENGEHLSGQHNLFTRPIV*YPALAV Trigger: TACTGCAAGTGCTGGATAGCAGACAATAGGCCTAGT...AAATAGGTTGTGTTGTCCACTTAGATGTTCCCCATTTTCTGGTTCCATTTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
||
| CDS-3UTR CCA 90 bp | ACAGTCACTCGTCGTCACCTCGCTGTCTTAAGTTTCGAGATTTTCCATTTTCAACAGGCTTTTCCCATTTaGATTCTCCTGTTTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TVTRRHLAVLSFEIFHFQQAFPI*ILLFLY Trigger: ATACAGAAACAGGAGAATCCAAATGGGAAAAGCCTG...TTGAAAATGGAAAATCTCGAAACTTAAGACAGCGAGGTGACGACGAGTGACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000227584.2 |
||
| CDS-3UTR GCA 90 bp | GAAGAAATGGAACCAGAAAATGGGGAACATCTAAGTGGACAACACAACCTATTTGACATTCCCCTTCAGTaGTTGGAAGTTCCAAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: EEMEPENGEHLSGQHNLFDIPLQ*LEVPNQ Trigger: TTGATTTGGAACTTCCAAGCACTGAAGGGGAATGTC...AAATAGGTTGTGTTGTCCACTTAGATGTTCCCCATTTTCTGGTTCCATTTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
||
| CDS CCA 90 bp | GAAATGTCTGAGGGTAGGGGTAAGCCGAGCCTTTTCAGATCCTCTTaGTACGCCTTCAGGGCGGCTGCCTCCATGGCAGCAAACTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EMSEGRGKPSLFRSS*YAFRAAASMAANSL Trigger: CAAGGAGTTTGCTGCCATGGAGGCAGCCGCCCTGAAGGCGTACCAAGAGGATCTGAAAAGGCTCGGCTTACCCCTACCCTCAGACATTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
||
| CDS TCA 90 bp | GTGGAGGCCTCTCCAGCTTTCTTCTGTTCCCCTTCGGAATCACTGTaGGAATCGGAGGACTTGGCGTCTTCTAGGGTGTCGGGCAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: VEASPAFFCSPSESL*ESEDLASSRVSGNF Trigger: AAAGTTGCCCGACACCCTAGAAGACGCCAAGTCCTCCGATTCTCACAGTGATTCCGAAGGGGAACAGAAGAAAGCTGGAGAGGCCTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| CDS-3UTR CAA 90 bp | AAAGCACAGGAGCTTGGAAAGGACACACCTCCTCTCCACAGCTTCACAGAGCACCTACCCAAACGGCCTTaGCTGCTGTCTTTTTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: KAQELGKDTPPLHSFTEHLPKRP*LLSFSN Trigger: ATTTGAAAAAGACAGCAGCAAAGGCCGTTTGGGTAG...GTGCTCTGTGAAGCTGTGGAGAGGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
||
| CDS-3UTR CAA 90 bp | GGTTTTAGGCAGGAGGGTAACTGCAAGTTTGAAGGCAGCCAGATATGCATGGTGCGCCAGCTTCTGAAGTaGATAGACATTCCCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GFRQEGNCKFEGSQICMVRQLLK*IDIPLQ Trigger: CTGAAGGGGAATGTCTATCAACTTCAGAAGCTGGCG...CACCATGCATATCTGGCTGCCTTCAAACTTGCAGTTACCCTCCTGCCTAAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| CDS-3UTR CAA 90 bp | TATTCAAAGCACAGGAGCTTGGAAAGGACACACCTCCTCTCCACAGCTTCACAGTCAACACTAGGCCTATaGTCTGCTATCCAGCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: YSKHRSLERTHLLSTASQSTLGL*SAIQHL Trigger: CAAGTGCTGGATAGCAGACAATAGGCCTAGTGTTGA...CTGTGAAGCTGTGGAGAGGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTTGAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| CDS-3UTR CAA 90 bp | CACGCCAACAATCCCAGAACTAAGGTTTTAGGCAGGAGGGTAACTGCAAGTTTGTTCTGGCTTCTCCCATaGAGATGCTCCTGTGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: HANNPRTKVLGRRVTASLFWLLP*RCSCDE Trigger: CTCATCACAGGAGCATCTCAATGGGAGAAGCCAGAA...CAAACTTGCAGTTACCCTCCTGCCTAAAACCTTAGTTCTGGGATTGTTGGCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| CDS-3UTR CAA 90 bp | AAAGCACAGGAGCTTGGAAAGGACACACCTCCTCTCCACAGCTTCACAGAGCACCTCCTGTTTAATTTCTaGCCATTCCCCATAAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KAQELGKDTPPLHSFTEHLLFNF*PFPIRV Trigger: AACCCTTATGGGGAATGGCAAGAAATTAAACAGGAG...GTGCTCTGTGAAGCTGTGGAGAGGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| CDS-3UTR CAA 90 bp | CCACAGCTTCACAGAGCACAGAGCAGCTTGGAAAGGACACCCCTTCCATCCATAATTCCCCTTCAGTGCTaGGAAGTTCCAAATCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: PQLHRAQSSLERTPLPSIIPLQC*EVPNQL Trigger: AAGTTGATTTGGAACTTCCAAGCACTGAAGGGGAAT...TATGGATGGAAGGGGTGTCCTTTCCAAGCTGCTCTGTGCTCTGTGAAGCTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| CDS-3UTR CAA 90 bp | AAAGCACAGGAGCTTGGAAAGGACACACCTCCTCTCCACAGCTTCACAGAGCACCTTTTTCAAATTCCCTaGAAATCCTTCTGGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KAQELGKDTPPLHSFTEHLFQIP*KSFWLL Trigger: GAGAAGCCAGAAGGATTTCAAGGGAATTTGAAAAAG...GTGCTCTGTGAAGCTGTGGAGAGGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| CDS-3UTR CAA 90 bp | AGTATTCAAAGCACAGGAGCTTGGAAAGGACACACCTCCTCTCCACAGCTTCACTTTATGATTAGCTTCTaGGTCTCTGTGGAGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SIQSTGAWKGHTSSPQLHFMISF*VSVEAS Trigger: AGAGGCCTCCACAGAGACCAAGAAGCTAATCATAAA...GTGAAGCTGTGGAGAGGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTTGAATACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| CDS-3UTR CAA 90 bp | CACGCCAACAATCCCAGAACTAAGGTTTTAGGCAGGAGGGTAACTGCAAGTTTGTCAAGTCTTCTCTTTTaGAAGACTGGGGCCACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HANNPRTKVLGRRVTASLSSLLF*KTGATP Trigger: TGGAGTGGCCCCAGTCTTCAAAAAGAGAAGACTTGA...CAAACTTGCAGTTACCCTCCTGCCTAAAACCTTAGTTCTGGGATTGTTGGCGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
||
| CDS-3UTR CAA 90 bp | AGGCTTCAGAAAGGACTGTCAAAACCACATTGTCTTGGGGCTGTGTCTGATTTCCCACCCATCCACCCTTaGAAGCTTCTTTCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RLQKGLSKPHCLGAVSDFPPIHP*KLLSSS Trigger: AGAAGAAGAAAGAAGCTTCAAAGGGTGGATGGGTGG...GAAATCAGACACAGCCCCAAGACAATGTGGTTTTGACAGTCCTTTCTGAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
||
| CDS-3UTR CAA 90 bp | TATTCAAAGCACAGGAGCTTGGAAAGGACACACCTCCTCTCCACAGCTTCACAGTCAGGCTTTTCCCATTaGGATTCTCCTGTTTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: YSKHRSLERTHLLSTASQSGFSH*DSPVSV Trigger: TACAGAAACAGGAGAATCCAAATGGGAAAAGCCTGA...CTGTGAAGCTGTGGAGAGGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTTGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
||
| CDS-3UTR CAA 90 bp | AGTATTCAAAGCACAGGAGCTTGGAAAGGACACACCTCCTCTCCACAGCTTCACCTCCTGTTTAATTTCTaGCCATTCCCCATAAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SIQSTGAWKGHTSSPQLHLLFNF*PFPIRV Trigger: AACCCTTATGGGGAATGGCAAGAAATTAAACAGGAG...GTGAAGCTGTGGAGAGGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTTGAATACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| CDS GCA 90 bp | CTTTTTCAAATTCCCTTGAAATCCTTCTGGCTTCTCCCATTGAGATaGTCCTGTGATGAGATCATAATAGTAGCAGTGGCCGTCGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LFQIPLKSFWLLPLR*SCDEIIIVAVAVGC Trigger: ACAGCCGACGGCCACTGCTACTATTATGATCTCATCACAGGAGCATCTCAATGGGAGAAGCCAGAAGGATTTCAAGGGAATTTGAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| CDS-3UTR CAA 90 bp | AGACATTCCCCTTCAGTGCTTGGAAGTTCCAAATCAACTTCTTCTCTTTGGGACTCAACACTAGGCCTATaGTCTGCTATCCAGCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: RHSPSVLGSSKSTSSLWDSTLGL*SAIQHL Trigger: CAAGTGCTGGATAGCAGACAATAGGCCTAGTGTTGA...GTCCCAAAGAGAAGAAGTTGATTTGGAACTTCCAAGCACTGAAGGGGAATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227584.2 |
||
| CDS-3UTR CAA 90 bp | CAACTTCTTCTCTTTGGGACGATCCATAGCCCACTTCTGTTCTGTGAGCATTTCCTACCCAAACGGCCTTaGCTGCTGTCTTTTTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: QLLLFGTIHSPLLFCEHFLPKRP*LLSFSN Trigger: ATTTGAAAAAGACAGCAGCAAAGGCCGTTTGGGTAG...GAAATGCTCACAGAACAGAAGTGGGCTATGGATCGTCCCAAAGAGAAGAAGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227584.2 |
||
| CDS-3UTR CAA 90 bp | GAGTTGTTCCAGACTAGCCTGGCAGACAAGAGGGTCTCAAACAAAACAAAACCATTTATGATTAGCTTCTaGGTCTCTGTGGAGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ELFQTSLADKRVSNKTKPFMISF*VSVEAS Trigger: AGAGGCCTCCACAGAGACCAAGAAGCTAATCATAAA...TGGTTTTGTTTTGTTTGAGACCCTCTTGTCTGCCAGGCTAGTCTGGAACAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
||
| CDS-3UTR CAA 90 bp | GCCAGAGGATCTGGACTTGAGGTTAGTCTTCAAGGGCAACACAGCAAAACTCTTCAAATCAACTTCTTCTaGAGACTCAGCCTCCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ARGSGLEVSLQGQHSKTLQINFF*RLSLLF Trigger: AAACAGGAGGCTGAGTCTCAAGAAGAAGTTGATTTG...AAGAGTTTTGCTGTGTTGCCCTTGAAGACTAACCTCAAGTCCAGATCCTCTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
||
| CDS-3UTR CAA 90 bp | AAAATGCAGCACTACAGTATTCAAAGCACAGGAGCTTGGAAAGGACACACCTCCTCAGGCTTTTCCCATTaGGATTCTCCTGTTTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: KMQHYSIQSTGAWKGHTSSGFSH*DSPVSV Trigger: TACAGAAACAGGAGAATCCAAATGGGAAAAGCCTGA...GGAGGTGTGTCCTTTCCAAGCTCCTGTGCTTTGAATACTGTAGTGCTGCATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
||
| CDS-3UTR CAA 90 bp | GAGTTGTTCCAGACTAGCCTGGCAGACAAGAGGGTCTCAAACAAAACAAAACCACTTTTTCAAATTCCCTaGAAATCCTTCTGGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ELFQTSLADKRVSNKTKPLFQIP*KSFWLL Trigger: GAGAAGCCAGAAGGATTTCAAGGGAATTTGAAAAAG...TGGTTTTGTTTTGTTTGAGACCCTCTTGTCTGCCAGGCTAGTCTGGAACAACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
||
| CDS CCA 90 bp | AACGGCCTTTGCTGCTGTCTTTTTCAAATTCCCTTGAAATCCTTCTaGCTTCTCCCATTGAGATGCTCCTGTGATGAGATCATAATAGTA | + |
|
Preference number: 5 (lower is better) Translates to: NGLCCCLFQIPLKSF*LLPLRCSCDEIIIV Trigger: TACTATTATGATCTCATCACAGGAGCATCTCAATGGGAGAAGCCAGAAGGATTTCAAGGGAATTTGAAAAAGACAGCAGCAAAGGCCGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
||
| CDS-3UTR CAA 90 bp | TTGATAGACATTCCCCTTCAGTGCTTGGAAGTTCCAAATCAACTTCTTCTCTTTCCACCCATCCACCCTTaGAAGCTTCTTTCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LIDIPLQCLEVPNQLLLFPPIHP*KLLSSS Trigger: AGAAGAAGAAAGAAGCTTCAAAGGGTGGATGGGTGG...AAAGAGAAGAAGTTGATTTGGAACTTCCAAGCACTGAAGGGGAATGTCTATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227584.2 |
||
| CDS-3UTR CAA 90 bp | ACATTGAACATAATACACTGTATTACAATGCAATGTGGTAGGCTACCACTTAAGTCTTTAAATACCACTTaGATTTCCCCAACGCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TLNIIHCITMQCGRLPLKSLNTT*ISPTPA Trigger: AGCTGGCGTTGGGGAAATCAAAGTGGTATTTAAAGA...CTTAAGTGGTAGCCTACCACATTGCATTGTAATACAGTGTATTATGTTCAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
||
| CDS TCA 72 bp | TCTCCAGCTTTCTTCTGTTCCCCTTCGGAATCACTGTaGGAATCGGAGGACTTGGCGTCTTCTAGGGTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SPAFFCSPSESL*ESEDLASSRVS Trigger: CGACACCCTAGAAGACGCCAAGTCCTCCGATTCTCACAGTGATTCCGAAGGGGAACAGAAGAAAGCTGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
||
| CDS CAA 90 bp | TCTTGGTACGCCTTCAGGGCGGCTGCCTCCATGGCAGCAAACTCCTaGGATGCCTTTTCTTCTTCCTTTGCCTTATCCAAGCTTTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: SWYAFRAAASMAANS*DAFSSSFALSKLFC Trigger: ACAGAAAAGCTTGGATAAGGCAAAGGAAGAAGAAAAGGCATCCAAGGAGTTTGCTGCCATGGAGGCAGCCGCCCTGAAGGCGTACCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| CDS TCA 72 bp | GCCGTCGGCTGTCACGCCTTCCACCCATCCACCCTTTaGAGCTTCTTTCTTCTTCTTCTTCTTTTTCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: AVGCHAFHPSTL*SFFLLLLLFLL Trigger: GAGAAGAAAAAGAAGAAGAAGAAGAAAGAAGCTTCAAAGGGTGGATGGGTGGAAGGCGTGACAGCCGACGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| CDS CAA 90 bp | GCCTTCTACCCAAACGGCCTTTGCTGCTGTCTTTTTCAAATTCCCTaGAAATCCTTCTGGCTTCTCCCATTGAGATGCTCCTGTGATGAG | + |
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Preference number: 6 (lower is better) Translates to: AFYPNGLCCCLFQIP*KSFWLLPLRCSCDE Trigger: CTCATCACAGGAGCATCTCAATGGGAGAAGCCAGAAGGATTTCAAGGGAATTTGAAAAAGACAGCAGCAAAGGCCGTTTGGGTAGAAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| CDS CCA 72 bp | TGCTGCTGTCTTTTTCAAATTCCCTTGAAATCCTTCTaGCTTCTCCCATTGAGATGCTCCTGTGATGAGATC | + |
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Preference number: 6 (lower is better) Translates to: CCCLFQIPLKSF*LLPLRCSCDEI Trigger: GATCTCATCACAGGAGCATCTCAATGGGAGAAGCCAGAAGGATTTCAAGGGAATTTGAAAAAGACAGCAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| CDS TCA 72 bp | TCTTTCTTCTTCTTCTTCTTTTTCTTCTCTTTCTGTTaGTTTGACGTAGGGGTGGGTTGGACAGTGCTGATG | + |
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Preference number: 6 (lower is better) Translates to: SFFFFFFFFSFC*FDVGVGWTVLM Trigger: CATCAGCACTGTCCAACCCACCCCTACGTCAAATCAACAGAAAGAGAAGAAAAAGAAGAAGAAGAAGAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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| CDS CAA 90 bp | TTCCAAATCAACTTCTTCTTGAGACTCAGCCTCCTGTTTAATTTCTaGCCATTCCCCATAAGGGTTTGTCGATTTCTTAAGAGTTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: FQINFFLRLSLLFNF*PFPIRVCRFLKSFG Trigger: CCCAAAACTCTTAAGAAATCGACAAACCCTTATGGGGAATGGCAAGAAATTAAACAGGAGGCTGAGTCTCAAGAAGAAGTTGATTTGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022601.7 |
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| CDS GCA 72 bp | TCCTCTTTCATGAAACTCAACACTAGGCCTATTGTCTaGTATCCAGCACTTGCAGTAATCACAGAATTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SSFMKLNTRPIV*YPALAVITEFL Trigger: AAGAAATTCTGTGATTACTGCAAGTGCTGGATAGCAGACAATAGGCCTAGTGTTGAGTTTCATGAAAGAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022601.7 ENSMUST00000227584.2 |
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