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Pregenerated sensors for WBP2NL (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022455

Ensembl transcript IDs: ENSMUST00000023089.5

Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 72 bp CCTATGTCAAGCAAGACATTAGGGGATTTAACCCTCTaGCGCTGTCCCTTCTTTATCCAGCTAACCAAGAAT +
Preference number: 3 (lower is better)
Translates to: PMSSKTLGDLTL*RCPFFIQLTKN
Trigger: ATTCTTGGTTAGCTGGATAAAGAAGGGACAGCGTCAGAGGGTTAAATCCCCTAATGTCTTGCTTGACATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5
CDS CCA 90 bp CCTAGAGGGCCCATCCAGAAGCTTGCAACTCGTAGTGGAACTCCTTaGGCAGCCGCAGAGGCAGCTTTGGCCATCAACTGGGCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: PRGPIQKLATRSGTP*AAAEAALAINWAKS
Trigger: CGACTTTGCCCAGTTGATGGCCAAAGCTGCCTCTGCGGCTGCCCAAGGAGTTCCACTACGAGTTGCAAGCTTCTGGATGGGCCCTCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5
CDS GCA 90 bp GGACGAGGTAGAGGGAAAAGATGCCTGGAATTCAGGATTCTGGACTaGCACAGACATGGGATGGCCTGCTTCAGACCCAGCAGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: GRGRGKRCLEFRILD*HRHGMACFRPSRWS
Trigger: GCTCCACCTGCTGGGTCTGAAGCAGGCCATCCCATGTCTGTGGCAGTCCAGAATCCTGAATTCCAGGCATCTTTTCCCTCTACCTCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5
CDS CCA 90 bp AGGTTGGGCTCCATACTCCATAGTGGGGGCTTCATATCCAGGAGGTaGGGATCCGTATCTCACAGGTGGAGGTCCATATCCAGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: RLGSILHSGGFISRR*GSVSHRWRSISRRW
Trigger: CCACCTCCTGGATATGGACCTCCACCTGTGAGATACGGATCCCCACCTCCTGGATATGAAGCCCCCACTATGGAGTATGGAGCCCAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5
CDS CCA 90 bp AAAGATGCCTGGAATTCAGGATTCTGGACTGCCACAGACATGGGATaGCCTGCTTCAGACCCAGCAGGTGGAGCTTCCTGTGCTACAGAC +
Preference number: 5 (lower is better)
Translates to: KDAWNSGFWTATDMG*PASDPAGGASCATD
Trigger: GTCTGTAGCACAGGAAGCTCCACCTGCTGGGTCTGAAGCAGGCCATCCCATGTCTGTGGCAGTCCAGAATCCTGAATTCCAGGCATCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5
CDS CCA 90 bp TGTGAGGACGAGGTAGAGGGAAAAGATGCCTGGAATTCAGGATTCTaGACTGCCACAGACATGGGATGGCCTGCTTCAGACCCAGCAGGT +
Preference number: 5 (lower is better)
Translates to: CEDEVEGKDAWNSGF*TATDMGWPASDPAG
Trigger: ACCTGCTGGGTCTGAAGCAGGCCATCCCATGTCTGTGGCAGTCCAGAATCCTGAATTCCAGGCATCTTTTCCCTCTACCTCGTCCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5
CDS CCA 90 bp GGTCCACTTCTGAACATTTCTTCAAGAGACTTTCACCATGAGGGATaGCGGCCCAACGGCGGTCCACTGTATGGTTCTGGTTCACTGCCA +
Preference number: 5 (lower is better)
Translates to: GPLLNISSRDFHHEG*RPNGGPLYGSGSLP
Trigger: TGGCAGTGAACCAGAACCATACAGTGGACCGCCGTTGGGCCGCCATCCCTCATGGTGAAAGTCTCTTGAAGAAATGTTCAGAAGTGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5
CDS TCA 90 bp AAGGAGAGGTCCACTTCTGAACATTTCTTCAAGAGACTTTCACCATaGGGGATGGCGGCCCAACGGCGGTCCACTGTATGGTTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: KERSTSEHFFKRLSP*GMAAQRRSTVWFWF
Trigger: GAACCAGAACCATACAGTGGACCGCCGTTGGGCCGCCATCCCTCATGGTGAAAGTCTCTTGAAGAAATGTTCAGAAGTGGACCTCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5
CDS GCA 90 bp GACTATTTTAAAAGTAGCAGAACCTTCCCAGCCACCGTCTGGAGCTaGCTGAATTGTCCCTTTAATGTAGTTTGCACCAAAGATTGGTTG +
Preference number: 5 (lower is better)
Translates to: DYFKSSRTFPATVWS*LNCPFNVVCTKDWL
Trigger: CAACCAATCTTTGGTGCAAACTACATTAAAGGGACAATTCAGGCAGCTCCAGACGGTGGCTGGGAAGGTTCTGCTACTTTTAAAATAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5
CDS CAA 72 bp CAGCAGGTGGAGCTTCCTGTGCTACAGACGTGGCCCTaGATCCAGGAGGTATGGACTCACGCCCTGAAGGAG +
Preference number: 6 (lower is better)
Translates to: QQVELPVLQTWP*IQEVWTHALKE
Trigger: CTCCTTCAGGGCGTGAGTCCATACCTCCTGGATCAAGGGCCACGTCTGTAGCACAGGAAGCTCCACCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5
CDS CCA 72 bp CCCATCCAGAAGCTTGCAACTCGTAGTGGAACTCCTTaGGCAGCCGCAGAGGCAGCTTTGGCCATCAACTGG +
Preference number: 6 (lower is better)
Translates to: PIQKLATRSGTP*AAAEAALAINW
Trigger: CCAGTTGATGGCCAAAGCTGCCTCTGCGGCTGCCCAAGGAGTTCCACTACGAGTTGCAAGCTTCTGGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5
CDS CAA 72 bp CGTAGTGGAACTCCTTGGGCAGCCGCAGAGGCAGCTTaGGCCATCAACTGGGCAAAGTCGATAGCACCTCCT +
Preference number: 6 (lower is better)
Translates to: RSGTPWAAAEAA*AINWAKSIAPP
Trigger: AGGAGGTGCTATCGACTTTGCCCAGTTGATGGCCAAAGCTGCCTCTGCGGCTGCCCAAGGAGTTCCACTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5
CDS CAA 90 bp CTTGCAACTCGTAGTGGAACTCCTTGGGCAGCCGCAGAGGCAGCTTaGGCCATCAACTGGGCAAAGTCGATAGCACCTCCTTTCCGGAAG +
Preference number: 6 (lower is better)
Translates to: LATRSGTPWAAAEAA*AINWAKSIAPPFRK
Trigger: CTTCCGGAAAGGAGGTGCTATCGACTTTGCCCAGTTGATGGCCAAAGCTGCCTCTGCGGCTGCCCAAGGAGTTCCACTACGAGTTGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5
CDS CCA 72 bp CGCAGGTGGGGCTCCATAGGCAACTTGGTATGCCTGTaGGGCATACATGTTCCTGTCCCCAGTGATGACATA +
Preference number: 6 (lower is better)
Translates to: RRWGSIGNLVCL*GIHVPVPSDDI
Trigger: TATGTCATCACTGGGGACAGGAACATGTATGCCCCACAGGCATACCAAGTTGCCTATGGAGCCCCACCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5
CDS GCA 72 bp AGAGGGAAAAGATGCCTGGAATTCAGGATTCTGGACTaGCACAGACATGGGATGGCCTGCTTCAGACCCAGC +
Preference number: 6 (lower is better)
Translates to: RGKRCLEFRILD*HRHGMACFRPS
Trigger: GCTGGGTCTGAAGCAGGCCATCCCATGTCTGTGGCAGTCCAGAATCCTGAATTCCAGGCATCTTTTCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5
CDS CCA 72 bp CCGGATCCCATAGGTGTAGTTCCGTATCTGGGAGGTTaGGCTCCATACTCCATAGTGGGGGCTTCATATCCA +
Preference number: 6 (lower is better)
Translates to: PDPIGVVPYLGG*APYSIVGASYP
Trigger: TGGATATGAAGCCCCCACTATGGAGTATGGAGCCCAACCTCCCAGATACGGAACTACACCTATGGGATCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5
CDS CAA 72 bp ACCGGATCCCATAGGTGTAGTTCCGTATCTGGGAGGTaGGGCTCCATACTCCATAGTGGGGGCTTCATATCC +
Preference number: 6 (lower is better)
Translates to: TGSHRCSSVSGR*GSILHSGGFIS
Trigger: GGATATGAAGCCCCCACTATGGAGTATGGAGCCCAACCTCCCAGATACGGAACTACACCTATGGGATCCGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5
CDS TCA 72 bp TCCACTTCTGAACATTTCTTCAAGAGACTTTCACCATaGGGGATGGCGGCCCAACGGCGGTCCACTGTATGG +
Preference number: 6 (lower is better)
Translates to: STSEHFFKRLSP*GMAAQRRSTVW
Trigger: CCATACAGTGGACCGCCGTTGGGCCGCCATCCCTCATGGTGAAAGTCTCTTGAAGAAATGTTCAGAAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5
CDS CCA 72 bp CTGAACATTTCTTCAAGAGACTTTCACCATGAGGGATaGCGGCCCAACGGCGGTCCACTGTATGGTTCTGGT +
Preference number: 6 (lower is better)
Translates to: LNISSRDFHHEG*RPNGGPLYGSG
Trigger: ACCAGAACCATACAGTGGACCGCCGTTGGGCCGCCATCCCTCATGGTGAAAGTCTCTTGAAGAAATGTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5
CDS CCA 72 bp GAGGTAGAGGGAAAAGATGCCTGGAATTCAGGATTCTaGACTGCCACAGACATGGGATGGCCTGCTTCAGAC +
Preference number: 6 (lower is better)
Translates to: EVEGKDAWNSGF*TATDMGWPASD
Trigger: GTCTGAAGCAGGCCATCCCATGTCTGTGGCAGTCCAGAATCCTGAATTCCAGGCATCTTTTCCCTCTACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5
CDS CCA 72 bp TTTGTACCACTAAAGAGGTTGGAGCCTGGCGGTGACTaGGGGAAGGAGAGGTCCACTTCTGAACATTTCTTC +
Preference number: 6 (lower is better)
Translates to: FVPLKRLEPGGD*GKERSTSEHFF
Trigger: GAAGAAATGTTCAGAAGTGGACCTCTCCTTCCCCCAGTCACCGCCAGGCTCCAACCTCTTTAGTGGTACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5
CDS GCA 72 bp AAAAGTAGCAGAACCTTCCCAGCCACCGTCTGGAGCTaGCTGAATTGTCCCTTTAATGTAGTTTGCACCAAA +
Preference number: 6 (lower is better)
Translates to: KSSRTFPATVWS*LNCPFNVVCTK
Trigger: TTTGGTGCAAACTACATTAAAGGGACAATTCAGGCAGCTCCAGACGGTGGCTGGGAAGGTTCTGCTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5
CDS GCA 72 bp GTCTGGAGCTGCCTGAATTGTCCCTTTAATGTAGTTTaGACCAAAGATTGGTTGTTCAACAGTGCAGTTATT +
Preference number: 6 (lower is better)
Translates to: VWSCLNCPFNVV*TKDWLFNSAVI
Trigger: AATAACTGCACTGTTGAACAACCAATCTTTGGTGCAAACTACATTAAAGGGACAATTCAGGCAGCTCCAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023089.5