Pregenerated sensors for WBP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034341Ensembl transcript IDs: ENSMUST00000074628.13, ENSMUST00000106444.4
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCTGGAAGCTCTCACAAAGAACAAGGTGGCCGGGTAAGTGTGACTaGACTGACAGTCTGCTGGGACAGCGGCCTTCCAGAGCCAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: PWKLSQRTRWPGKCD*TDSLLGQRPSRARS Trigger: GCTCCTGGCTCTGGAAGGCCGCTGTCCCAGCAGACTGTCAGTCCAGTCACACTTACCCGGCCACCTTGTTCTTTGTGAGAGCTTCCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| 3UTR GCA 90 bp | TTGGAAGGCCTCAGTCCCAGATCAAAGGGCCTGGCGGGACAGACATaGATTCTCTATCCCTCCTGCAGAGCAGCCCCCTGTAAAGGGGAG | + |
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Preference number: 1 (lower is better) Translates to: LEGLSPRSKGLAGQT*ILYPSCRAAPCKGE Trigger: CTCCCCTTTACAGGGGGCTGCTCTGCAGGAGGGATAGAGAATGCATGTCTGTCCCGCCAGGCCCTTTGATCTGGGACTGAGGCCTTCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| 3UTR CCA 90 bp | AGAACAATGGTCACCAGGCTGAAGGGGCTGGGCAGCAGTGAGGAGTaGCCAGAGAGTCCCTCTGTATGGGTGGGGGCTAGTATCATGAGG | + |
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Preference number: 1 (lower is better) Translates to: RTMVTRLKGLGSSEE*PESPSVWVGASIMR Trigger: CCTCATGATACTAGCCCCCACCCATACAGAGGGACTCTCTGGCCACTCCTCACTGCTGCCCAGCCCCTTCAGCCTGGTGACCATTGTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| 3UTR CCA 90 bp | GGAAGCGCCCAGCAAAATCCCTGGAAGCTCTCACAAAGAACAAGGTaGCCGGGTAAGTGTGACTGGACTGACAGTCTGCTGGGACAGCGG | + |
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Preference number: 1 (lower is better) Translates to: GSAQQNPWKLSQRTR*PGKCDWTDSLLGQR Trigger: CCGCTGTCCCAGCAGACTGTCAGTCCAGTCACACTTACCCGGCCACCTTGTTCTTTGTGAGAGCTTCCAGGGATTTTGCTGGGCGCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| 3UTR CCA 90 bp | GCTTCACCTCTGATGCCAGCCACTGGAAGCGCCCAGCAAAATCCCTaGAAGCTCTCACAAAGAACAAGGTGGCCGGGTAAGTGTGACTGG | + |
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Preference number: 1 (lower is better) Translates to: ASPLMPATGSAQQNP*KLSQRTRWPGKCDW Trigger: CCAGTCACACTTACCCGGCCACCTTGTTCTTTGTGAGAGCTTCCAGGGATTTTGCTGGGCGCTTCCAGTGGCTGGCATCAGAGGTGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| 3UTR-3UTR CCA 90 bp | GACGTGCCTCTCAGAGGCCAGGAGTTCCACCTTTCTATCAGGGCTAGCTCCTGCCCCTCCCTGGCCTCCTaGAATCCCAGATGCAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: DVPLRGQEFHLSIRASSCPSLAS*NPRCSP Trigger: GGGGCTGCATCTGGGATTCCAGGAGGCCAGGGAGGG...GCAGGAGCTAGCCCTGATAGAAAGGTGGAACTCCTGGCCTCTGAGAGGCACGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| 3UTR-3UTR TCA 90 bp | GGTGGCCGGGTAAGTGTGACTGGACTGACAGTCTGCTGGGACAGCGGCCTTCCAGGAAGAAGAGCGCTGTaGGCTGAGCTAGGGCGAGAA | + |
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Preference number: 2 (lower is better) Translates to: GGRVSVTGLTVCWDSGLPGRRAL*AELGRE Trigger: TTCTCGCCCTAGCTCAGCTCACAGCGCTCTTCTTCC...TGGAAGGCCGCTGTCCCAGCAGACTGTCAGTCCAGTCACACTTACCCGGCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| 3UTR-3UTR CCA 90 bp | GAACGAGGGTCACCCCGTGCTCCTGCGAGCTCCAGAGATGGTGAAAGGGAAGCTGAACAGGGCCCTCCCTaGCCTCCTGGAATCCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: ERGSPRAPASSRDGEREAEQGPP*PPGIPD Trigger: ATCTGGGATTCCAGGAGGCCAGGGAGGGCCCTGTTC...AGCTTCCCTTTCACCATCTCTGGAGCTCGCAGGAGCACGGGGTGACCCTCGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| 3UTR-3UTR CCA 90 bp | GACGTGCCTCTCAGAGGCCAGGAGTTCCACCTTTCTATCAGGGCTAGCTCCTGCCCAGGAAGGGGTCTCTaGGTAAGAGGCGGGAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: DVPLRGQEFHLSIRASSCPGRGL*VRGGKW Trigger: CCACTTCCCGCCTCTTACCCAGAGACCCCTTCCTGG...GCAGGAGCTAGCCCTGATAGAAAGGTGGAACTCCTGGCCTCTGAGAGGCACGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| 3UTR-3UTR CCA 90 bp | GGTGGCCGGGTAAGTGTGACTGGACTGACAGTCTGCTGGGACAGCGGCCTTCCATGTTGGGGAGACACATaGCTGGTCTTAGGAGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: GGRVSVTGLTVCWDSGLPCWGDT*LVLGAQ Trigger: TTGGGCTCCTAAGACCAGCCATGTGTCTCCCCAACA...TGGAAGGCCGCTGTCCCAGCAGACTGTCAGTCCAGTCACACTTACCCGGCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| 3UTR-3UTR GCA 90 bp | CTATCAGGGCTAGCTCCTGCTAACTTTATACTCAGGCCTGGGGAAGAACAGGGCTCCTGGAATCCCAGATaGAGCCCCACGGGAGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: LSGLAPANFILRPGEEQGSWNPR*SPTGGP Trigger: TGGGCCTCCCGTGGGGCTGCATCTGGGATTCCAGGA...GCCCTGTTCTTCCCCAGGCCTGAGTATAAAGTTAGCAGGAGCTAGCCCTGATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGCTCTCACAAAGAACAAGGTGGCCGGGTAAGTGTGACTGGACTGACAGTGAACAGGGCCCTCCCTaGCCTCCTGGAATCCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: WKLSQRTRWPGKCDWTDSEQGPP*PPGIPD Trigger: ATCTGGGATTCCAGGAGGCCAGGGAGGGCCCTGTTC...ACTGTCAGTCCAGTCACACTTACCCGGCCACCTTGTTCTTTGTGAGAGCTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| 3UTR-3UTR CCA 90 bp | GATGCCAGCCACTGGAAGCGCCCAGCAAAATCCCTGGAAGCTCTCACAAAGAACCTTTATACTCAGGCCTaGGGAAGAACAGGGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: DASHWKRPAKSLEALTKNLYTQA*GRTGPS Trigger: GGAGGGCCCTGTTCTTCCCCAGGCCTGAGTATAAAG...GTTCTTTGTGAGAGCTTCCAGGGATTTTGCTGGGCGCTTCCAGTGGCTGGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| 3UTR-3UTR CCA 90 bp | AAAATCCCTGGAAGCTCTCACAAAGAACAAGGTGGCCGGGTAAGTGTGACTGGAGCTAGGGCGAGAAGCTaGGACGTGCCTCTCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: KIPGSSHKEQGGRVSVTGARARS*DVPLRG Trigger: GCCTCTGAGAGGCACGTCCCAGCTTCTCGCCCTAGC...TCCAGTCACACTTACCCGGCCACCTTGTTCTTTGTGAGAGCTTCCAGGGATTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| 3UTR CAA 90 bp | AGCACACCAGGGGTAAGGAATGTGAACAGGGTTTGGCAGGGCCTGTaGGGGAGACACATGGCTGGTCTTAGGAGCCCAAGAGATGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: STPGVRNVNRVWQGL*GRHMAGLRSPRDEE Trigger: TTCTTCATCTCTTGGGCTCCTAAGACCAGCCATGTGTCTCCCCAACAGGCCCTGCCAAACCCTGTTCACATTCCTTACCCCTGGTGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGCTCTCACAAAGAACAAGGTGGCCGGGTAAGTGTGACTGGACTGACAGTAATGTGAACAGGGTTTaGCAGGGCCTGTTGGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: WKLSQRTRWPGKCDWTDSNVNRV*QGLLGR Trigger: TCTCCCCAACAGGCCCTGCCAAACCCTGTTCACATT...ACTGTCAGTCCAGTCACACTTACCCGGCCACCTTGTTCTTTGTGAGAGCTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| 3UTR-3UTR CCA 90 bp | CAGGTTAGAGGTCACATAGTTGGAAGGCCTCAGTCCCAGATCAAAGGGCCTGGCGCCCAGCAAAATCCCTaGAAGCTCTCACAAAGAACA | + |
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Preference number: 2 (lower is better) Translates to: QVRGHIVGRPQSQIKGPGAQQNP*KLSQRT Trigger: TGTTCTTTGTGAGAGCTTCCAGGGATTTTGCTGGGC...GCCAGGCCCTTTGATCTGGGACTGAGGCCTTCCAACTATGTGACCTCTAACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| 3UTR GCA 72 bp | CAAGGTGGCCGGGTAAGTGTGACTGGACTGACAGTCTaGTGGGACAGCGGCCTTCCAGAGCCAGGAGCACAC | + |
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Preference number: 3 (lower is better) Translates to: QGGRVSVTGLTV*WDSGLPEPGAH Trigger: GTGTGCTCCTGGCTCTGGAAGGCCGCTGTCCCAGCAGACTGTCAGTCCAGTCACACTTACCCGGCCACCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| 3UTR TCA 72 bp | GGTGAAAGGGAAGCTGGGAAGAAGAGCGCTGTGAGCTaGGCTAGGGCGAGAAGCTGGGACGTGCCTCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: GEREAGKKSAVS*ARARSWDVPLR Trigger: TCTGAGAGGCACGTCCCAGCTTCTCGCCCTAGCTCAGCTCACAGCGCTCTTCTTCCCAGCTTCCCTTTCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| 3UTR GCA 72 bp | CTCAGTCCCAGATCAAAGGGCCTGGCGGGACAGACATaGATTCTCTATCCCTCCTGCAGAGCAGCCCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: LSPRSKGLAGQT*ILYPSCRAAPC Trigger: ACAGGGGGCTGCTCTGCAGGAGGGATAGAGAATGCATGTCTGTCCCGCCAGGCCCTTTGATCTGGGACTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| 3UTR-3UTR CAA 90 bp | CACAAAGAACAAGGTGGCCGGGTAAGTGTGACTGGACTGACAGTCTGCTGGGACGTTTGGCAGGGCCTGTaGGGGAGACACATGGCTGGT | + |
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Preference number: 3 (lower is better) Translates to: HKEQGGRVSVTGLTVCWDVWQGL*GRHMAG Trigger: ACCAGCCATGTGTCTCCCCAACAGGCCCTGCCAAAC...GTCCCAGCAGACTGTCAGTCCAGTCACACTTACCCGGCCACCTTGTTCTTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| 3UTR TCA 72 bp | AGGAGCCCAAGAGATGAAGAACAATGGTCACCAGGCTaGAGGGGCTGGGCAGCAGTGAGGAGTGGCCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: RSPRDEEQWSPG*RGWAAVRSGQR Trigger: TCTCTGGCCACTCCTCACTGCTGCCCAGCCCCTTCAGCCTGGTGACCATTGTTCTTCATCTCTTGGGCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| 3UTR TCA 72 bp | AGAGGGGCTTCCTCTGTAACACAGTGGCTTCACCTCTaGTGCCAGCCACTGGAAGCGCCCAGCAAAATCCCT | + |
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Preference number: 3 (lower is better) Translates to: RGASSVTQWLHL*CQPLEAPSKIP Trigger: AGGGATTTTGCTGGGCGCTTCCAGTGGCTGGCATCAGAGGTGAAGCCACTGTGTTACAGAGGAAGCCCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| 3UTR CCA 72 bp | AGGAGCACACCAGGGGTAAGGAATGTGAACAGGGTTTaGCAGGGCCTGTTGGGGAGACACATGGCTGGTCTT | + |
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Preference number: 3 (lower is better) Translates to: RSTPGVRNVNRV*QGLLGRHMAGL Trigger: AAGACCAGCCATGTGTCTCCCCAACAGGCCCTGCCAAACCCTGTTCACATTCCTTACCCCTGGTGTGCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| 3UTR CCA 72 bp | CATAGTTGGAAGGCCTCAGTCCCAGATCAAAGGGCCTaGCGGGACAGACATGCATTCTCTATCCCTCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: HSWKASVPDQRA*RDRHAFSIPPA Trigger: TGCAGGAGGGATAGAGAATGCATGTCTGTCCCGCCAGGCCCTTTGATCTGGGACTGAGGCCTTCCAACTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| 3UTR-3UTR CAA 90 bp | AAAATCCCTGGAAGCTCTCACAAAGAACAAGGTGGCCGGGTAAGTGTGACTGGAGAATGTGAACAGGGTTaGGCAGGGCCTGTTGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: KIPGSSHKEQGGRVSVTGECEQG*AGPVGE Trigger: CTCCCCAACAGGCCCTGCCAAACCCTGTTCACATTC...TCCAGTCACACTTACCCGGCCACCTTGTTCTTTGTGAGAGCTTCCAGGGATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| 3UTR CCA 72 bp | CAGCAAAATCCCTGGAAGCTCTCACAAAGAACAAGGTaGCCGGGTAAGTGTGACTGGACTGACAGTCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: QQNPWKLSQRTR*PGKCDWTDSLL Trigger: CAGCAGACTGTCAGTCCAGTCACACTTACCCGGCCACCTTGTTCTTTGTGAGAGCTTCCAGGGATTTTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| CDS-3UTR TCA 90 bp | GAACGAGGGTCACCCCGTGCTCCTGCGAGCTCCAGAGATGGTGAAAGGGAAGCTGGGCACTGGGGCCGCTaGCCGGAGGCTCCATGGGCC | + |
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Preference number: 4 (lower is better) Translates to: ERGSPRAPASSRDGEREAGHWGR*PEAPWA Trigger: GGCCCATGGAGCCTCCGGTCAGCGGCCCCAGTGCCC...AGCTTCCCTTTCACCATCTCTGGAGCTCGCAGGAGCACGGGGTGACCCTCGTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| CDS-3UTR TCA 90 bp | GACGTGCCTCTCAGAGGCCAGGAGTTCCACCTTTCTATCAGGGCTAGCTCCTGCGGGCACTGGGGCCGCTaGCCGGAGGCTCCATGGGCC | + |
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Preference number: 4 (lower is better) Translates to: DVPLRGQEFHLSIRASSCGHWGR*PEAPWA Trigger: GGCCCATGGAGCCTCCGGTCAGCGGCCCCAGTGCCC...GCAGGAGCTAGCCCTGATAGAAAGGTGGAACTCCTGGCCTCTGAGAGGCACGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| CDS-3UTR CCA 90 bp | TGGCCTCCTGGAATCCCAGATGCAGCCCCACGGGAGGCCCAGGAAGGGGTCTCTGGGGTAGTAGGGTGGTaGTGGAGGCTGGCTCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: WPPGIPDAAPREAQEGVSGVVGW*WRLARG Trigger: CCCACGAGCCAGCCTCCACCACCACCCTACTACCCC...AGAGACCCCTTCCTGGGCCTCCCGTGGGGCTGCATCTGGGATTCCAGGAGGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| CDS-3UTR CCA 90 bp | CCCTCCCTGGCCTCCTGGAATCCCAGATGCAGCCCCACGGGAGGCCCAGGAAGGGGTCTTCTTGTCTTCTaGGGGGTAGTAGGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PSLASWNPRCSPTGGPGRGLLVF*GVVGWW Trigger: CCACCACCCTACTACCCCCCAGAAGACAAGAAGACC...CCTTCCTGGGCCTCCCGTGGGGCTGCATCTGGGATTCCAGGAGGCCAGGGAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| CDS-3UTR GCA 90 bp | CCCTCCCTGGCCTCCTGGAATCCCAGATGCAGCCCCACGGGAGGCCCAGGAAGGTTCCCAGCCACCTCCTaGTTCAGCCTTCACTATTCC | + |
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Preference number: 4 (lower is better) Translates to: PSLASWNPRCSPTGGPGRFPATS*FSLHYS Trigger: GGAATAGTGAAGGCTGAAGCAGGAGGTGGCTGGGAA...CCTTCCTGGGCCTCCCGTGGGGCTGCATCTGGGATTCCAGGAGGCCAGGGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| CDS-3UTR TCA 90 bp | GAACGAGGGTCACCCCGTGCTCCTGCGAGCTCCAGAGATGGTGAAAGGGAAGCTTGGCGCCCCCTGCTGTaGAGGTCAGCTTGTAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: ERGSPRAPASSRDGEREAWRPLL*RSACRR Trigger: CCTCCTACAAGCTGACCTTCACAGCAGGGGGCGCCA...AGCTTCCCTTTCACCATCTCTGGAGCTCGCAGGAGCACGGGGTGACCCTCGTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| CDS-3UTR TCA 90 bp | CTAGGGCGAGAAGCTGGGACGTGCCTCTCAGAGGCCAGGAGTTCCACCTTTCTATGGCGCCCCCTGCTGTaGAGGTCAGCTTGTAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LGREAGTCLSEARSSTFLWRPLL*RSACRR Trigger: CCTCCTACAAGCTGACCTTCACAGCAGGGGGCGCCA...TAGAAAGGTGGAACTCCTGGCCTCTGAGAGGCACGTCCCAGCTTCTCGCCCTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| CDS-3UTR CCA 90 bp | GAACGAGGGTCACCCCGTGCTCCTGCGAGCTCCAGAGATGGTGAAAGGGAAGCTCCCAGGATAGGGTGGTaGTGGGGGCTGTACATAGCC | + |
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Preference number: 4 (lower is better) Translates to: ERGSPRAPASSRDGEREAPRIGW*WGLYIA Trigger: GGCTATGTACAGCCCCCACCACCACCCTATCCTGGG...AGCTTCCCTTTCACCATCTCTGGAGCTCGCAGGAGCACGGGGTGACCCTCGTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| CDS-3UTR CCA 90 bp | CGAGGGTCACCCCGTGCTCCTGCGAGCTCCAGAGATGGTGAAAGGGAAGCTGGGGGTTGTAATAGGCACTaGCAGCGGCTTCTGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: RGSPRAPASSRDGEREAGGCNRH*QRLLQP Trigger: AGGCTGCAGAAGCCGCTGCCAGTGCCTATTACAACC...CCCAGCTTCCCTTTCACCATCTCTGGAGCTCGCAGGAGCACGGGGTGACCCTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| CDS-3UTR CCA 90 bp | CTAGGGCGAGAAGCTGGGACGTGCCTCTCAGAGGCCAGGAGTTCCACCTTTCTAGGGCCCAGGATAGGGTaGTGGTGGGGGCTGTACATA | + |
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Preference number: 4 (lower is better) Translates to: LGREAGTCLSEARSSTFLGPRIG*WWGLYI Trigger: TATGTACAGCCCCCACCACCACCCTATCCTGGGCCC...TAGAAAGGTGGAACTCCTGGCCTCTGAGAGGCACGTCCCAGCTTCTCGCCCTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| CDS-3UTR CCA 90 bp | CTAGGGCGAGAAGCTGGGACGTGCCTCTCAGAGGCCAGGAGTTCCACCTTTCTAGTAGTAGGGTGGTGGTaGAGGCTGGCTCGTGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: LGREAGTCLSEARSSTFLVVGWW*RLARGH Trigger: ATGCCCACGAGCCAGCCTCCACCACCACCCTACTAC...TAGAAAGGTGGAACTCCTGGCCTCTGAGAGGCACGTCCCAGCTTCTCGCCCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| CDS-3UTR GCA 90 bp | CTAGGGCGAGAAGCTGGGACGTGCCTCTCAGAGGCCAGGAGTTCCACCTTTCTAACCTGGAGCATCCTCTaGCCAAACTCAATGGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: LGREAGTCLSEARSSTFLTWSIL*PNSMAP Trigger: GGGCGCCATTGAGTTTGGGCAGAGGATGCTCCAGGT...TAGAAAGGTGGAACTCCTGGCCTCTGAGAGGCACGTCCCAGCTTCTCGCCCTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| CDS-3UTR CCA 90 bp | AACGAGGGTCACCCCGTGCTCCTGCGAGCTCCAGAGATGGTGAAAGGGAAGCTGAGGATAGGGTGGTGGTaGGGGCTGTACATAGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: NEGHPVLLRAPEMVKGKLRIGWW*GLYIAH Trigger: ATGGGCTATGTACAGCCCCCACCACCACCCTATCCT...CAGCTTCCCTTTCACCATCTCTGGAGCTCGCAGGAGCACGGGGTGACCCTCGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| CDS-3UTR CCA 90 bp | CTATCAGGGCTAGCTCCTGCTAACTTTATACTCAGGCCTGGGGAAGAACAGGGCGGGGTAGTAGGGTGGTaGTGGAGGCTGGCTCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: LSGLAPANFILRPGEEQGGVVGW*WRLARG Trigger: CCCACGAGCCAGCCTCCACCACCACCCTACTACCCC...GCCCTGTTCTTCCCCAGGCCTGAGTATAAAGTTAGCAGGAGCTAGCCCTGATAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| CDS-3UTR GCA 90 bp | AACGAGGGTCACCCCGTGCTCCTGCGAGCTCCAGAGATGGTGAAAGGGAAGCTGGGCATCATGAAGGACTaGATGGCGTCCTTCCCCTTA | + |
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Preference number: 4 (lower is better) Translates to: NEGHPVLLRAPEMVKGKLGIMKD*MASFPL Trigger: TAAGGGGAAGGACGCCATGCAGTCCTTCATGATGCC...CAGCTTCCCTTTCACCATCTCTGGAGCTCGCAGGAGCACGGGGTGACCCTCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| CDS-3UTR GCA 90 bp | AGTGAGGAGTGGCCAGAGAGTCCCTCTGTATGGGTGGGGGCTAGTATCATGAGGACCTGGAGCATCCTCTaGCCAAACTCAATGGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: SEEWPESPSVWVGASIMRTWSIL*PNSMAP Trigger: GGGCGCCATTGAGTTTGGGCAGAGGATGCTCCAGGT...CCTCATGATACTAGCCCCCACCCATACAGAGGGACTCTCTGGCCACTCCTCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| CDS-3UTR CCA 90 bp | GATGCCAGCCACTGGAAGCGCCCAGCAAAATCCCTGGAAGCTCTCACAAAGAACGTAGTAGGGTGGTGGTaGAGGCTGGCTCGTGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: DASHWKRPAKSLEALTKNVVGWW*RLARGH Trigger: ATGCCCACGAGCCAGCCTCCACCACCACCCTACTAC...GTTCTTTGTGAGAGCTTCCAGGGATTTTGCTGGGCGCTTCCAGTGGCTGGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| CDS-3UTR TCA 90 bp | GACGTGCCTCTCAGAGGCCAGGAGTTCCACCTTTCTATCAGGGCTAGCTCCTGCGGTAAAAGGGCATCATaGAGGACTGCATGGCGTCCT | + |
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Preference number: 4 (lower is better) Translates to: DVPLRGQEFHLSIRASSCGKRAS*RTAWRP Trigger: AGGACGCCATGCAGTCCTTCATGATGCCCTTTTACC...GCAGGAGCTAGCCCTGATAGAAAGGTGGAACTCCTGGCCTCTGAGAGGCACGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| CDS-3UTR CCA 90 bp | TGTGTCTGGACCAGGAACGAACAAGAGCAATTCTTAGTGCATCCAGGGGGCGTGGGGCCCAGGATAGGGTaGTGGTGGGGGCTGTACATA | + |
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Preference number: 4 (lower is better) Translates to: CVWTRNEQEQFLVHPGGVGPRIG*WWGLYI Trigger: TATGTACAGCCCCCACCACCACCCTATCCTGGGCCC...CACGCCCCCTGGATGCACTAAGAATTGCTCTTGTTCGTTCCTGGTCCAGACACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| CDS-3UTR GCA 90 bp | CACAAAGAACAAGGTGGCCGGGTAAGTGTGACTGGACTGACAGTCTGCTGGGACCTCAATGGCGCCCCCTaGTGTGAAGGTCAGCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: HKEQGGRVSVTGLTVCWDLNGAP*CEGQLV Trigger: TACAAGCTGACCTTCACAGCAGGGGGCGCCATTGAG...GTCCCAGCAGACTGTCAGTCCAGTCACACTTACCCGGCCACCTTGTTCTTTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| CDS-3UTR GCA 90 bp | AACGAGGGTCACCCCGTGCTCCTGCGAGCTCCAGAGATGGTGAAAGGGAAGCTGATAGAACTCTTGAGATaGCACCTGGAGCATCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: NEGHPVLLRAPEMVKGKLIELLR*HLEHPL Trigger: CAGAGGATGCTCCAGGTGGCATCTCAAGAGTTCTAT...CAGCTTCCCTTTCACCATCTCTGGAGCTCGCAGGAGCACGGGGTGACCCTCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106444.4 |
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| CDS-3UTR CCA 90 bp | CAGGTTAGAGGTCACATAGTTGGAAGGCCTCAGTCCCAGATCAAAGGGCCTGGCACCCATAGGCTCCATTaGGGACTTCACCTCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: QVRGHIVGRPQSQIKGPGTHRLH*GLHLWR Trigger: CCTCCAGAGGTGAAGTCCCCAATGGAGCCTATGGGT...GCCAGGCCCTTTGATCTGGGACTGAGGCCTTCCAACTATGTGACCTCTAACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| CDS-3UTR CCA 90 bp | CACAAAGAACAAGGTGGCCGGGTAAGTGTGACTGGACTGACAGTCTGCTGGGACTGGATAGAACTCGGGTaGGGGTGGTGGATAGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: HKEQGGRVSVTGLTVCWDWIELG*GWWIGV Trigger: TACCCCTATCCACCACCCCCACCCGAGTTCTATCCA...GTCCCAGCAGACTGTCAGTCCAGTCACACTTACCCGGCCACCTTGTTCTTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| CDS-3UTR CCA 90 bp | TGGAAGCTCTCACAAAGAACAAGGTGGCCGGGTAAGTGTGACTGGACTGACAGTCCCAGGATAGGGTGGTaGTGGGGGCTGTACATAGCC | + |
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Preference number: 4 (lower is better) Translates to: WKLSQRTRWPGKCDWTDSPRIGW*WGLYIA Trigger: GGCTATGTACAGCCCCCACCACCACCCTATCCTGGG...ACTGTCAGTCCAGTCACACTTACCCGGCCACCTTGTTCTTTGTGAGAGCTTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| CDS-3UTR GCA 90 bp | GACGTGCCTCTCAGAGGCCAGGAGTTCCACCTTTCTATCAGGGCTAGCTCCTGCAGACATTGTGTGGGTTaGCTGGGTTGTAATAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: DVPLRGQEFHLSIRASSCRHCVG*LGCNRH Trigger: GTGCCTATTACAACCCAGGCAACCCACACAATGTCT...GCAGGAGCTAGCCCTGATAGAAAGGTGGAACTCCTGGCCTCTGAGAGGCACGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| CDS-3UTR CCA 90 bp | CTATCAGGGCTAGCTCCTGCTAACTTTATACTCAGGCCTGGGGAAGAACAGGGCAGACATAGGCCCCGCTaGGCATGTAAGGGTACCCAT | + |
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Preference number: 4 (lower is better) Translates to: LSGLAPANFILRPGEEQGRHRPR*ACKGTH Trigger: ATGGGTACCCTTACATGCCCAGCGGGGCCTATGTCT...GCCCTGTTCTTCCCCAGGCCTGAGTATAAAGTTAGCAGGAGCTAGCCCTGATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| CDS-3UTR CCA 90 bp | CTATCAGGGCTAGCTCCTGCTAACTTTATACTCAGGCCTGGGGAAGAACAGGGCGGTCTTCTTGTCTTCTaGGGGGTAGTAGGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LSGLAPANFILRPGEEQGGLLVF*GVVGWW Trigger: CCACCACCCTACTACCCCCCAGAAGACAAGAAGACC...GCCCTGTTCTTCCCCAGGCCTGAGTATAAAGTTAGCAGGAGCTAGCCCTGATAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| CDS-3UTR GCA 90 bp | AGTGAGGAGTGGCCAGAGAGTCCCTCTGTATGGGTGGGGGCTAGTATCATGAGGAGACATTGTGTGGGTTaGCTGGGTTGTAATAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: SEEWPESPSVWVGASIMRRHCVG*LGCNRH Trigger: GTGCCTATTACAACCCAGGCAACCCACACAATGTCT...CCTCATGATACTAGCCCCCACCCATACAGAGGGACTCTCTGGCCACTCCTCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| CDS-3UTR CCA 90 bp | TGGACCAGGAACGAACAAGAGCAATTCTTAGTGCATCCAGGGGGCGTGAAGCTTGCTGTACATAGCCCATaGCCCCATCCATCATGGGAG | + |
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Preference number: 4 (lower is better) Translates to: WTRNEQEQFLVHPGGVKLAVHSP*PHPSWE Trigger: CTCCCATGATGGATGGGGCCATGGGCTATGTACAGC...AAGCTTCACGCCCCCTGGATGCACTAAGAATTGCTCTTGTTCGTTCCTGGTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| CDS-3UTR CCA 90 bp | TGGACCAGGAACGAACAAGAGCAATTCTTAGTGCATCCAGGGGGCGTGAAGCTTAGGATAGGGTGGTGGTaGGGGCTGTACATAGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: WTRNEQEQFLVHPGGVKLRIGWW*GLYIAH Trigger: ATGGGCTATGTACAGCCCCCACCACCACCCTATCCT...AAGCTTCACGCCCCCTGGATGCACTAAGAATTGCTCTTGTTCGTTCCTGGTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| CDS-3UTR GCA 90 bp | GGAGACACATGGCTGGTCTTAGGAGCCCAAGAGATGAAGAACAATGGTCACCAGGGCATCATGAAGGACTaGATGGCGTCCTTCCCCTTA | + |
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Preference number: 4 (lower is better) Translates to: GDTWLVLGAQEMKNNGHQGIMKD*MASFPL Trigger: TAAGGGGAAGGACGCCATGCAGTCCTTCATGATGCC...CTGGTGACCATTGTTCTTCATCTCTTGGGCTCCTAAGACCAGCCATGTGTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| CDS-3UTR GCA 90 bp | GGAGACACATGGCTGGTCTTAGGAGCCCAAGAGATGAAGAACAATGGTCACCAGTTCCCAGCCACCTCCTaGTTCAGCCTTCACTATTCC | + |
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Preference number: 4 (lower is better) Translates to: GDTWLVLGAQEMKNNGHQFPATS*FSLHYS Trigger: GGAATAGTGAAGGCTGAAGCAGGAGGTGGCTGGGAA...CTGGTGACCATTGTTCTTCATCTCTTGGGCTCCTAAGACCAGCCATGTGTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| CDS-3UTR CCA 90 bp | AAAATCCCTGGAAGCTCTCACAAAGAACAAGGTGGCCGGGTAAGTGTGACTGGATGGGGACTTCACCTCTaGAGGCTTGAGATGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: KIPGSSHKEQGGRVSVTGWGLHL*RLEMPP Trigger: AGGTGGCATCTCAAGCCTCCAGAGGTGAAGTCCCCA...TCCAGTCACACTTACCCGGCCACCTTGTTCTTTGTGAGAGCTTCCAGGGATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| CDS-3UTR CCA 90 bp | AAAATCCCTGGAAGCTCTCACAAAGAACAAGGTGGCCGGGTAAGTGTGACTGGAGGTTGTAATAGGCACTaGCAGCGGCTTCTGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: KIPGSSHKEQGGRVSVTGGCNRH*QRLLQP Trigger: AGGCTGCAGAAGCCGCTGCCAGTGCCTATTACAACC...TCCAGTCACACTTACCCGGCCACCTTGTTCTTTGTGAGAGCTTCCAGGGATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| CDS-3UTR CAA 90 bp | CTAGGGCGAGAAGCTGGGACGTGCCTCTCAGAGGCCAGGAGTTCCACCTTTCTAGCGGCTTCTGCAGCCTaGGCCTCGGCTGCAGGAGTA | + |
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Preference number: 5 (lower is better) Translates to: LGREAGTCLSEARSSTFLAASAA*ASAAGV Trigger: TACTCCTGCAGCCGAGGCCAAGGCTGCAGAAGCCGC...TAGAAAGGTGGAACTCCTGGCCTCTGAGAGGCACGTCCCAGCTTCTCGCCCTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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| CDS-3UTR CAA 90 bp | TGTGTCTGGACCAGGAACGAACAAGAGCAATTCTTAGTGCATCCAGGGGGCGTGGCGGCTTCTGCAGCCTaGGCCTCGGCTGCAGGAGTA | + |
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Preference number: 5 (lower is better) Translates to: CVWTRNEQEQFLVHPGGVAASAA*ASAAGV Trigger: TACTCCTGCAGCCGAGGCCAAGGCTGCAGAAGCCGC...CACGCCCCCTGGATGCACTAAGAATTGCTCTTGTTCGTTCCTGGTCCAGACACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074628.13 |
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| CDS-3UTR CAA 90 bp | GACGTGCCTCTCAGAGGCCAGGAGTTCCACCTTTCTATCAGGGCTAGCTCCTGCTCCTGGATAGAACTCTaGAGATGCCACCTGGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: DVPLRGQEFHLSIRASSCSWIEL*RCHLEH Trigger: ATGCTCCAGGTGGCATCTCAAGAGTTCTATCCAGGA...GCAGGAGCTAGCCCTGATAGAAAGGTGGAACTCCTGGCCTCTGAGAGGCACGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106444.4 |
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| CDS GCA 72 bp | GGCACTGGCAGCGGCTTCTGCAGCCTTGGCCTCGGCTaGAGGAGTAGCGGGGGCACTGGGGCCGCTGACCGG | + |
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Preference number: 6 (lower is better) Translates to: GTGSGFCSLGLG*RSSGGTGAADR Trigger: CCGGTCAGCGGCCCCAGTGCCCCCGCTACTCCTGCAGCCGAGGCCAAGGCTGCAGAAGCCGCTGCCAGTGCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074628.13 ENSMUST00000106444.4 |
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