Pregenerated sensors for WBP11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030216Ensembl transcript IDs: ENSMUST00000116514.4, ENSMUST00000204129.2, ENSMUST00000204272.3
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGCAAACATGAGGAGGCTCCTGGAACTGGACTTGGAAAACACCTaGCAGTGGACATTGCTCTTCACTGTAATAAGAGCCTCTTGTTCC | + |
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Preference number: 1 (lower is better) Translates to: QANMRRLLELDLENT*QWTLLFTVIRASCS Trigger: GGAACAAGAGGCTCTTATTACAGTGAAGAGCAATGTCCACTGTCAGGTGTTTTCCAAGTCCAGTTCCAGGAGCCTCCTCATGTTTGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116514.4 |
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| 3UTR-3UTR CCA 90 bp | CACATGAGTCAAAAACAAGTAACTAAGACCTCGCTGACAGAATTCCCAAAATGGGGAGGCTCCTGGAACTaGACTTGGAAAACACCTGAC | + |
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Preference number: 2 (lower is better) Translates to: HMSQKQVTKTSLTEFPKWGGSWN*TWKTPD Trigger: GTCAGGTGTTTTCCAAGTCCAGTTCCAGGAGCCTCC...CCATTTTGGGAATTCTGTCAGCGAGGTCTTAGTTACTTGTTTTTGACTCATGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000116514.4 |
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| 3UTR TCA 72 bp | AGAAACACCTTGTGCAGGGATCCCAGCAGGCAAACATaGGGAGGCTCCTGGAACTGGACTTGGAAAACACCT | + |
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Preference number: 3 (lower is better) Translates to: RNTLCRDPSRQT*GGSWNWTWKTP Trigger: AGGTGTTTTCCAAGTCCAGTTCCAGGAGCCTCCTCATGTTTGCCTGCTGGGATCCCTGCACAAGGTGTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116514.4 |
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| CDS-3UTR GCA 90 bp | TGTGCAGGGATCCCAGCAGGCAAACATGAGGAGGCTCCTGGAACTGGACTTGGAGATGGTGGCGGCACTTaGATCATCCGCCTTCGGTCG | + |
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Preference number: 4 (lower is better) Translates to: CAGIPAGKHEEAPGTGLGDGGGT*IIRLRS Trigger: CGACCGAAGGCGGATGATGCAAGTGCCGCCACCATC...TCCAAGTCCAGTTCCAGGAGCCTCCTCATGTTTGCCTGCTGGGATCCCTGCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116514.4 |
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| CDS-3UTR TCA 90 bp | GAGGAGGCTCCTGGAACTGGACTTGGAAAACACCTGACAGTGGACATTGCTCTTTCCGCCTTCGGTCGCTaGATGAGGCTGGGTGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: EEAPGTGLGKHLTVDIALSAFGR*MRLGGA Trigger: TGCCCCACCCAGCCTCATTCAGCGACCGAAGGCGGA...AAGAGCAATGTCCACTGTCAGGTGTTTTCCAAGTCCAGTTCCAGGAGCCTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116514.4 |
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| CDS-3UTR GCA 90 bp | AAACACCTTGTGCAGGGATCCCAGCAGGCAAACATGAGGAGGCTCCTGGAACTGAAGAGGCTGCAGCCGTaGTGTCAGAGTGGCCATCGT | + |
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Preference number: 4 (lower is better) Translates to: KHLVQGSQQANMRRLLELKRLQP*CQSGHR Trigger: ACGATGGCCACTCTGACAGCACGGCTGCAGCCTCTT...CAGTTCCAGGAGCCTCCTCATGTTTGCCTGCTGGGATCCCTGCACAAGGTGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116514.4 |
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| CDS-3UTR CCA 90 bp | GAGGAGGCTCCTGGAACTGGACTTGGAAAACACCTGACAGTGGACATTGCTCTTAGGTGGTCTCAGGAATaGAGGAGCCCCTGGAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: EEAPGTGLGKHLTVDIALRWSQE*RSPWRR Trigger: CCGCCTCCAGGGGCTCCTCCATTCCTGAGACCACCT...AAGAGCAATGTCCACTGTCAGGTGTTTTCCAAGTCCAGTTCCAGGAGCCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116514.4 |
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| CDS-3UTR GCA 90 bp | TCTTGTTCCACAAACCAGTACTCTGAACAGAAGCCTGTCCTGGCAGGAGGCCCTTCGGCGTACCCTCAGTaGAGTGGGCACAAACCGTGT | + |
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Preference number: 4 (lower is better) Translates to: SCSTNQYSEQKPVLAGGPSAYPQ*SGHKPC Trigger: ACACGGTTTGTGCCCACTGCACTGAGGGTACGCCGA...AGGGCCTCCTGCCAGGACAGGCTTCTGTTCAGAGTACTGGTTTGTGGAACAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116514.4 |
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| CDS-3UTR CCA 90 bp | GGAAAACACCTGACAGTGGACATTGCTCTTCACTGTAATAAGAGCCTCTTGTTCGGCACTCAACACCCCTaGGTTGGGCAAGGGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GKHLTVDIALHCNKSLLFGTQHP*VGQGSW Trigger: CCAGCTCCCTTGCCCAACCCAGGGGTGTTGAGTGCC...GAACAAGAGGCTCTTATTACAGTGAAGAGCAATGTCCACTGTCAGGTGTTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116514.4 |
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| CDS-3UTR CCA 90 bp | GGAAAACACCTGACAGTGGACATTGCTCTTCACTGTAATAAGAGCCTCTTGTTCCTGAATGAGGCTGGGTaGGGCACTCAACACCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GKHLTVDIALHCNKSLLFLNEAG*GTQHPW Trigger: CCAGGGGTGTTGAGTGCCCCACCCAGCCTCATTCAG...GAACAAGAGGCTCTTATTACAGTGAAGAGCAATGTCCACTGTCAGGTGTTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116514.4 |
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| CDS-3UTR TCA 90 bp | CAGTGGACATTGCTCTTCACTGTAATAAGAGCCTCTTGTTCCACAAACCAGTACTGGAGGCCCATACGCTaGGGTTTTCTTCAGGATGGA | + |
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Preference number: 4 (lower is better) Translates to: QWTLLFTVIRASCSTNQYWRPIR*GFLQDG Trigger: TCCATCCTGAAGAAAACCTCAGCGTATGGGCCTCCA...GTACTGGTTTGTGGAACAAGAGGCTCTTATTACAGTGAAGAGCAATGTCCACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116514.4 |
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| CDS-3UTR GCA 90 bp | GTGCTTCACATCCTGGTCTATTGTAAAGAAACACCTTGTGCAGGGATCCCAGCATTTCATCTTCAAAACTaGAGCCCGGACCATCATGCG | + |
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Preference number: 4 (lower is better) Translates to: VLHILVYCKETPCAGIPAFHLQN*SPDHHA Trigger: CGCATGATGGTCCGGGCTGCAGTTTTGAAGATGAAA...TGCTGGGATCCCTGCACAAGGTGTTTCTTTACAATAGACCAGGATGTGAAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116514.4 |
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| CDS-3UTR CCA 90 bp | GTGGACATTGCTCTTCACTGTAATAAGAGCCTCTTGTTCCACAAACCAGTACTCCCTGGATCAAGATGTTaGAAGGAGCATGCGGCATGT | + |
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Preference number: 4 (lower is better) Translates to: VDIALHCNKSLLFHKPVLPGSRC*KEHAAC Trigger: ACATGCCGCATGCTCCTTCCAACATCTTGATCCAGG...GAGTACTGGTTTGTGGAACAAGAGGCTCTTATTACAGTGAAGAGCAATGTCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116514.4 |
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| CDS-3UTR TCA 90 bp | CAGTGGACATTGCTCTTCACTGTAATAAGAGCCTCTTGTTCCACAAACCAGTACAAGTACTGGCTCAGCTaGGCTCTCTTCTGTTCATAT | + |
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Preference number: 4 (lower is better) Translates to: QWTLLFTVIRASCSTNQYKYWLS*ALFCSY Trigger: ATATGAACAGAAGAGAGCTCAGCTGAGCCAGTACTT...GTACTGGTTTGTGGAACAAGAGGCTCTTATTACAGTGAAGAGCAATGTCCACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116514.4 |
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| CDS-3UTR CAA 90 bp | TCTTGTTCCACAAACCAGTACTCTGAACAGAAGCCTGTCCTGGCAGGAGGCCCTCTCAACACCCCTGGGTaGGGCAAGGGAGCTGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: SCSTNQYSEQKPVLAGGPLNTPG*GKGAGG Trigger: CCCACCAGCTCCCTTGCCCAACCCAGGGGTGTTGAG...AGGGCCTCCTGCCAGGACAGGCTTCTGTTCAGAGTACTGGTTTGTGGAACAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116514.4 |
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| CDS GCA 90 bp | GCCGTGCTGTCAGAGTGGCCATCGTCTTTATGCTGCTTCTGCGACTaGTTCTCGGCTTCAGAATCATCCGAGTCGTCGGCATCCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: AVLSEWPSSLCCFCD*FSASESSESSASSS Trigger: GGAGGAGGATGCCGACGACTCGGATGATTCTGAAGCCGAGAAGCAGTCGCAGAAGCAGCATAAAGACGATGGCCACTCTGACAGCACGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116514.4 ENSMUST00000204129.2 |
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| CDS-3UTR CAA 90 bp | AAACACCTTGTGCAGGGATCCCAGCAGGCAAACATGAGGAGGCTCCTGGAACTGCGTGTGACCTCTGCCTaGGGATTGGTGATCTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: KHLVQGSQQANMRRLLELRVTSA*GLVIWG Trigger: GCCCCAGATCACCAATCCCAAGGCAGAGGTCACACG...CAGTTCCAGGAGCCTCCTCATGTTTGCCTGCTGGGATCCCTGCACAAGGTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116514.4 |
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| CDS-3UTR CAA 90 bp | TGTGCAGGGATCCCAGCAGGCAAACATGAGGAGGCTCCTGGAACTGGACTTGGACATGTCCCGGATAATTaGTTTGGGGTCTTTCATCTT | + |
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Preference number: 5 (lower is better) Translates to: CAGIPAGKHEEAPGTGLGHVPDN*FGVFHL Trigger: AAGATGAAAGACCCCAAACAAATTATCCGGGACATG...TCCAAGTCCAGTTCCAGGAGCCTCCTCATGTTTGCCTGCTGGGATCCCTGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116514.4 |
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| CDS-3UTR CAA 90 bp | CACATGAGTCAAAAACAAGTAACTAAGACCTCGCTGACAGAATTCCCAAAATGGCGATGGTGGCGGCACTaGCATCATCCGCCTTCGGTC | + |
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Preference number: 5 (lower is better) Translates to: HMSQKQVTKTSLTEFPKWRWWRH*HHPPSV Trigger: GACCGAAGGCGGATGATGCAAGTGCCGCCACCATCG...CCATTTTGGGAATTCTGTCAGCGAGGTCTTAGTTACTTGTTTTTGACTCATGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116514.4 |
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| CDS-3UTR CAA 90 bp | CCTGGAACTGGACTTGGAAAACACCTGACAGTGGACATTGCTCTTCACTGTAATTCCCGGATAATTTGTTaGGGGTCTTTCATCTTCAAA | + |
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Preference number: 5 (lower is better) Translates to: PGTGLGKHLTVDIALHCNSRIIC*GSFIFK Trigger: TTTGAAGATGAAAGACCCCAAACAAATTATCCGGGA...ATTACAGTGAAGAGCAATGTCCACTGTCAGGTGTTTTCCAAGTCCAGTTCCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116514.4 |
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| CDS CCA 72 bp | TGCATCATCCGCCTTCGGTCGCTGAATGAGGCTGGGTaGGGCACTCAACACCCCTGGGTTGGGCAAGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: CIIRLRSLNEAG*GTQHPWVGQGS Trigger: GCTCCCTTGCCCAACCCAGGGGTGTTGAGTGCCCCACCCAGCCTCATTCAGCGACCGAAGGCGGATGATGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116514.4 |
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| CDS GCA 72 bp | TTCTCCTCAGTGTTGTCGCGCTCACTGTCCTCGCGGTaGCCGAACTCATCCCCGTCACTCTCTGCATCTGAC | + |
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Preference number: 6 (lower is better) Translates to: FSSVLSRSLSSR*PNSSPSLSASD Trigger: GTCAGATGCAGAGAGTGACGGGGATGAGTTCGGGCACCGCGAGGACAGTGAGCGCGACAACACTGAGGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116514.4 ENSMUST00000204272.3 |
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| CDS GCA 72 bp | TCAGAGTGGCCATCGTCTTTATGCTGCTTCTGCGACTaGTTCTCGGCTTCAGAATCATCCGAGTCGTCGGCA | + |
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Preference number: 6 (lower is better) Translates to: SEWPSSLCCFCD*FSASESSESSA Trigger: TGCCGACGACTCGGATGATTCTGAAGCCGAGAAGCAGTCGCAGAAGCAGCATAAAGACGATGGCCACTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116514.4 ENSMUST00000204129.2 |
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