Pregenerated sensors for WBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030035Ensembl transcript IDs: ENSMUST00000032111.11, ENSMUST00000113936.10, ENSMUST00000146328.4, ENSMUST00000151393.7, ENSMUST00000205023.2
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCACCCCTGGGTCTCAAGCTCCCTGGGGTAGAGGAGGCACAGTGTaGGACCCAGAGCAGTGCTCCCAACCAGATGGGATTGCTGTGGAT | + |
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Preference number: 1 (lower is better) Translates to: STPGSQAPWGRGGTV*DPEQCSQPDGIAVD Trigger: ATCCACAGCAATCCCATCTGGTTGGGAGCACTGCTCTGGGTCTCACACTGTGCCTCCTCTACCCCAGGGAGCTTGAGACCCAGGGGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| 3UTR CCA 90 bp | AGACAGAGGGAACCTCCCTGGGGGTTTCACTACGCCTCTGGTAACTaGAGAGCCACTGCAGGCTTGCATTGCAACCATGAGATGGGGTCT | + |
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Preference number: 1 (lower is better) Translates to: RQREPPWGFHYASGN*RATAGLHCNHEMGS Trigger: AGACCCCATCTCATGGTTGCAATGCAAGCCTGCAGTGGCTCTCCAGTTACCAGAGGCGTAGTGAAACCCCCAGGGAGGTTCCCTCTGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| 3UTR CCA 90 bp | CAGTGTGAGACCCAGAGCAGTGCTCCCAACCAGATGGGATTGCTGTaGATGATAAAGGATGGTATCCAGGGCGCGAGTCTGGGTTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: QCETQSSAPNQMGLL*MIKDGIQGASLGSS Trigger: GCTGGAACCCAGACTCGCGCCCTGGATACCATCCTTTATCATCCACAGCAATCCCATCTGGTTGGGAGCACTGCTCTGGGTCTCACACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| 3UTR CCA 90 bp | GAGCAGTGCTCCCAACCAGATGGGATTGCTGTGGATGATAAAGGATaGTATCCAGGGCGCGAGTCTGGGTTCCAGCTCGTCTCCAAATTG | + |
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Preference number: 1 (lower is better) Translates to: EQCSQPDGIAVDDKG*YPGRESGFQLVSKL Trigger: CAATTTGGAGACGAGCTGGAACCCAGACTCGCGCCCTGGATACCATCCTTTATCATCCACAGCAATCCCATCTGGTTGGGAGCACTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| 3UTR CCA 90 bp | AGAAAAACATCACAAATAACTGCTGCAAGACAGAGGGAACCTCCCTaGGGGTTTCACTACGCCTCTGGTAACTGGAGAGCCACTGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: RKTSQITAARQREPP*GFHYASGNWRATAG Trigger: GCCTGCAGTGGCTCTCCAGTTACCAGAGGCGTAGTGAAACCCCCAGGGAGGTTCCCTCTGTCTTGCAGCAGTTATTTGTGATGTTTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| 3UTR GCA 90 bp | TTTCACTACGCCTCTGGTAACTGGAGAGCCACTGCAGGCTTGCATTaGAACCATGAGATGGGGTCTAAGAGGGTGCAGGTAAAGTCAACT | + |
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Preference number: 1 (lower is better) Translates to: FHYASGNWRATAGLH*NHEMGSKRVQVKST Trigger: AGTTGACTTTACCTGCACCCTCTTAGACCCCATCTCATGGTTGCAATGCAAGCCTGCAGTGGCTCTCCAGTTACCAGAGGCGTAGTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCTCCCTGGGGTAGAGGAGGCACAGTGTGAGACCCAGAGCAGTGCTCCCAACTCCAGGGCGCGAGTCTaGGTTCCAGCTCGTCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: KLPGVEEAQCETQSSAPNSRARV*VPARLQ Trigger: TTGGAGACGAGCTGGAACCCAGACTCGCGCCCTGGA...GTTGGGAGCACTGCTCTGGGTCTCACACTGTGCCTCCTCTACCCCAGGGAGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGGAGAGCCACTGCAGGCTTGCATTGCAACCATGAGATGGGGTCTAAGAGGGGTACCTTTGGCTCCATaGGCTCCTCCCCCACCCCGG | + |
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Preference number: 2 (lower is better) Translates to: TGEPLQACIATMRWGLRGVPLAP*APPPPR Trigger: CCGGGGTGGGGGAGGAGCTCATGGAGCCAAAGGTAC...CCCTCTTAGACCCCATCTCATGGTTGCAATGCAAGCCTGCAGTGGCTCTCCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| 3UTR CAA 90 bp | GAGGCACAGTGTGAGACCCAGAGCAGTGCTCCCAACCAGATGGGATaGCTGTGGATGATAAAGGATGGTATCCAGGGCGCGAGTCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: EAQCETQSSAPNQMG*LWMIKDGIQGASLG Trigger: ACCCAGACTCGCGCCCTGGATACCATCCTTTATCATCCACAGCAATCCCATCTGGTTGGGAGCACTGCTCTGGGTCTCACACTGTGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| 3UTR CAA 90 bp | GGATGGTATCCAGGGCGCGAGTCTGGGTTCCAGCTCGTCTCCAAATaGCTCCCTCAAGAGAAGATGCTGCCGGACTCTGCTGTGACAATA | + |
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Preference number: 2 (lower is better) Translates to: GWYPGRESGFQLVSK*LPQEKMLPDSAVTI Trigger: TATTGTCACAGCAGAGTCCGGCAGCATCTTCTCTTGAGGGAGCAATTTGGAGACGAGCTGGAACCCAGACTCGCGCCCTGGATACCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTCTGGGTTCCAGCTCGTCTCCAAATTGCTCCCTCAAGAGAAGATGCTGCCGACCCCGGACAGGAAGTaGCAGGAAAGGGGAAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: ESGFQLVSKLLPQEKMLPTPDRK*QERGKR Trigger: TCTCTTTCCCCTTTCCTGTCACTTCCTGTCCGGGGT...CGGCAGCATCTTCTCTTGAGGGAGCAATTTGGAGACGAGCTGGAACCCAGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| 3UTR-3UTR GCA 90 bp | TGGTATCCAGGGCGCGAGTCTGGGTTCCAGCTCGTCTCCAAATTGCTCCCTCAAGAGCCACTGCAGGCTTaGATTGCAACCATGAGATGG | + |
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Preference number: 2 (lower is better) Translates to: WYPGRESGFQLVSKLLPQEPLQA*IATMRW Trigger: CCATCTCATGGTTGCAATGCAAGCCTGCAGTGGCTC...TTGAGGGAGCAATTTGGAGACGAGCTGGAACCCAGACTCGCGCCCTGGATACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| 3UTR CAA 90 bp | TGGGGGTTTCACTACGCCTCTGGTAACTGGAGAGCCACTGCAGGCTaGCATTGCAACCATGAGATGGGGTCTAAGAGGGTGCAGGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: WGFHYASGNWRATAG*HCNHEMGSKRVQVK Trigger: CTTTACCTGCACCCTCTTAGACCCCATCTCATGGTTGCAATGCAAGCCTGCAGTGGCTCTCCAGTTACCAGAGGCGTAGTGAAACCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCTCCCTGGGGTAGAGGAGGCACAGTGTGAGACCCAGAGCAGTGCTCCCAACATCACAAATAACTGCTaGAAGACAGAGGGAACCTCC | + |
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Preference number: 2 (lower is better) Translates to: KLPGVEEAQCETQSSAPNITNNC*KTEGTS Trigger: GGAGGTTCCCTCTGTCTTGCAGCAGTTATTTGTGAT...GTTGGGAGCACTGCTCTGGGTCTCACACTGTGCCTCCTCTACCCCAGGGAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCAAATTGCTCCCTCAAGAGAAGATGCTGCCGGACTCTGCTGTGACAATAGGTACGCCTCTGGTAACTaGAGAGCCACTGCAGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: LQIAPSREDAAGLCCDNRYASGN*RATAGL Trigger: CAAGCCTGCAGTGGCTCTCCAGTTACCAGAGGCGTA...CCTATTGTCACAGCAGAGTCCGGCAGCATCTTCTCTTGAGGGAGCAATTTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTGCTCCCAACCAGATGGGATTGCTGTGGATGATAAAGGATGGTATCCAGGGACTTCAGAGTACCTTTaGCTCCATGAGCTCCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: QCSQPDGIAVDDKGWYPGTSEYL*LHELLP Trigger: GGGGAGGAGCTCATGGAGCCAAAGGTACTCTGAAGT...CCCTGGATACCATCCTTTATCATCCACAGCAATCCCATCTGGTTGGGAGCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| 3UTR-3UTR CCA 90 bp | GATAAAGGATGGTATCCAGGGCGCGAGTCTGGGTTCCAGCTCGTCTCCAAATTGATTGCAACCATGAGATaGGGTCTAAGAGGGTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: DKGWYPGRESGFQLVSKLIATMR*GLRGCR Trigger: CCTGCACCCTCTTAGACCCCATCTCATGGTTGCAAT...CAATTTGGAGACGAGCTGGAACCCAGACTCGCGCCCTGGATACCATCCTTTATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCTCCCTGGGGTAGAGGAGGCACAGTGTGAGACCCAGAGCAGTGCTCCCAACGCAGGTAAAGTCAACTaGATCTACGTAATAAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: KLPGVEEAQCETQSSAPNAGKVN*IYVISL Trigger: TAGACTTATTACGTAGATGCAGTTGACTTTACCTGC...GTTGGGAGCACTGCTCTGGGTCTCACACTGTGCCTCCTCTACCCCAGGGAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| 3UTR GCA 72 bp | CAGGGCGCGAGTCTGGGTTCCAGCTCGTCTCCAAATTaGTCCCTCAAGAGAAGATGCTGCCGGACTCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: QGASLGSSSSPN*SLKRRCCRTLL Trigger: CAGCAGAGTCCGGCAGCATCTTCTCTTGAGGGAGCAATTTGGAGACGAGCTGGAACCCAGACTCGCGCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| 3UTR CCA 72 bp | GAACCTCCCTGGGGGTTTCACTACGCCTCTGGTAACTaGAGAGCCACTGCAGGCTTGCATTGCAACCATGAG | + |
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Preference number: 3 (lower is better) Translates to: EPPWGFHYASGN*RATAGLHCNHE Trigger: CTCATGGTTGCAATGCAAGCCTGCAGTGGCTCTCCAGTTACCAGAGGCGTAGTGAAACCCCCAGGGAGGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| 3UTR CCA 72 bp | TCCCAACCAGATGGGATTGCTGTGGATGATAAAGGATaGTATCCAGGGCGCGAGTCTGGGTTCCAGCTCGTC | + |
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Preference number: 3 (lower is better) Translates to: SQPDGIAVDDKG*YPGRESGFQLV Trigger: GACGAGCTGGAACCCAGACTCGCGCCCTGGATACCATCCTTTATCATCCACAGCAATCCCATCTGGTTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| 3UTR CCA 72 bp | TCACAAATAACTGCTGCAAGACAGAGGGAACCTCCCTaGGGGTTTCACTACGCCTCTGGTAACTGGAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: SQITAARQREPP*GFHYASGNWRA Trigger: GGCTCTCCAGTTACCAGAGGCGTAGTGAAACCCCCAGGGAGGTTCCCTCTGTCTTGCAGCAGTTATTTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| 3UTR CCA 72 bp | CTGCATCTACGTAATAAGTCTAGACAAAGAGTAGAATaGTCATGTTCAGGAACTTCAGAGTACCTTTGGCTC | + |
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Preference number: 3 (lower is better) Translates to: LHLRNKSRQRVE*SCSGTSEYLWL Trigger: GAGCCAAAGGTACTCTGAAGTTCCTGAACATGACCATTCTACTCTTTGTCTAGACTTATTACGTAGATGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| CDS-3UTR GCA 90 bp | GAGGGTGGGGACGGTCCCACATGGAGGACTGCAGTTGAAACCAGGGCTGAATCCGCCAGCCCCGTGGCATaGCCCATGGTAAGCCAACAA | + |
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Preference number: 4 (lower is better) Translates to: EGGDGPTWRTAVETRAESASPVA*PMVSQQ Trigger: TTGTTGGCTTACCATGGGGCATGCCACGGGGCTGGC...GGATTCAGCCCTGGTTTCAACTGCAGTCCTCCATGTGGGACCGTCCCCACCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032111.11 ENSMUST00000113936.10 |
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| CDS-3UTR CCA 90 bp | GAGGGTGGGGACGGTCCCACATGGAGGACTGCAGTTGAAACCAGGGCTGAATCCAGGTGGCGGTGTGCCTaGGTGGTGAACCACATCCTC | + |
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Preference number: 4 (lower is better) Translates to: EGGDGPTWRTAVETRAESRWRCA*VVNHIL Trigger: GAGGATGTGGTTCACCACCCAGGCACACCGCCACCT...GGATTCAGCCCTGGTTTCAACTGCAGTCCTCCATGTGGGACCGTCCCCACCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032111.11 ENSMUST00000113936.10 |
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| CDS-3UTR CCA 90 bp | GAGGGTGGGGACGGTCCCACATGGAGGACTGCAGTTGAAACCAGGGCTGAATCCCACAGTGTAAGGAGGTaGCGGTGTGCCTGGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: EGGDGPTWRTAVETRAESHSVRR*RCAWVV Trigger: CACCACCCAGGCACACCGCCACCTCCTTACACTGTG...GGATTCAGCCCTGGTTTCAACTGCAGTCCTCCATGTGGGACCGTCCCCACCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032111.11 ENSMUST00000113936.10 |
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| CDS-3UTR GCA 90 bp | GAGGGTGGGGACGGTCCCACATGGAGGACTGCAGTTGAAACCAGGGCTGAATCCAAGGAGGTGGCGGTGTaGCTGGGTGGTGAACCACAT | + |
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Preference number: 4 (lower is better) Translates to: EGGDGPTWRTAVETRAESKEVAV*LGGEPH Trigger: ATGTGGTTCACCACCCAGGCACACCGCCACCTCCTT...GGATTCAGCCCTGGTTTCAACTGCAGTCCTCCATGTGGGACCGTCCCCACCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032111.11 ENSMUST00000113936.10 |
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| 3UTR CAA 72 bp | CCAGGGCGCGAGTCTGGGTTCCAGCTCGTCTCCAAATaGCTCCCTCAAGAGAAGATGCTGCCGGACTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PGRESGFQLVSK*LPQEKMLPDSA Trigger: AGCAGAGTCCGGCAGCATCTTCTCTTGAGGGAGCAATTTGGAGACGAGCTGGAACCCAGACTCGCGCCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| CDS-3UTR GCA 90 bp | GAGGGTGGGGACGGTCCCACATGGAGGACTGCAGTTGAAACCAGGGCTGAATCCTCCCTCAAGAGAAGATaGTGCCGGACTCTGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: EGGDGPTWRTAVETRAESSLKRR*CRTLLL Trigger: CAGCAGCAGAGTCCGGCAGCATCTTCTCTTGAGGGA...GGATTCAGCCCTGGTTTCAACTGCAGTCCTCCATGTGGGACCGTCCCCACCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032111.11 |
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| CDS-3UTR CCA 90 bp | GAGGGTGGGGACGGTCCCACATGGAGGACTGCAGTTGAAACCAGGGCTGAATCCCCTCGCTTCCTTGAGTaGCTCACCTTCACTGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: EGGDGPTWRTAVETRAESPRFLE*LTFTGV Trigger: GACTCCAGTGAAGGTGAGCCACTCAAGGAAGCGAGG...GGATTCAGCCCTGGTTTCAACTGCAGTCCTCCATGTGGGACCGTCCCCACCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032111.11 ENSMUST00000113936.10 |
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| 3UTR CAA 72 bp | AGGAGGGTGGGGACGGTCCCACATGGAGGACTGCAGTaGAAACCAGGGCTGAATCCTGGTGGCCAAGTAATA | + |
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Preference number: 4 (lower is better) Translates to: RRVGTVPHGGLQ*KPGLNPGGQVI Trigger: TATTACTTGGCCACCAGGATTCAGCCCTGGTTTCAACTGCAGTCCTCCATGTGGGACCGTCCCCACCCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032111.11 ENSMUST00000113936.10 |
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| 3UTR CAA 72 bp | CACTACGCCTCTGGTAACTGGAGAGCCACTGCAGGCTaGCATTGCAACCATGAGATGGGGTCTAAGAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: HYASGNWRATAG*HCNHEMGSKRV Trigger: CACCCTCTTAGACCCCATCTCATGGTTGCAATGCAAGCCTGCAGTGGCTCTCCAGTTACCAGAGGCGTAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205023.2 |
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| CDS-3UTR GCA 90 bp | CAGTTGAAACCAGGGCTGAATCCTGGTGGCCAAGTAATACCCAGTTTCCCTCTTAACTGGGCTCAATCCTaGCCTGGGCTCACCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QLKPGLNPGGQVIPSFPLNWAQS*PGLTLL Trigger: CAGGAGGGTGAGCCCAGGGCAGGATTGAGCCCAGTT...AAGAGGGAAACTGGGTATTACTTGGCCACCAGGATTCAGCCCTGGTTTCAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032111.11 ENSMUST00000113936.10 |
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| CDS-3UTR CCA 90 bp | CAGTTGAAACCAGGGCTGAATCCTGGTGGCCAAGTAATACCCAGTTTCCCTCTTTCCAGGGCGCGAGTCTaGGTTCCAGCTCGTCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: QLKPGLNPGGQVIPSFPLSRARV*VPARLQ Trigger: TTGGAGACGAGCTGGAACCCAGACTCGCGCCCTGGA...AAGAGGGAAACTGGGTATTACTTGGCCACCAGGATTCAGCCCTGGTTTCAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032111.11 |
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| CDS-3UTR CCA 90 bp | CAGTTGAAACCAGGGCTGAATCCTGGTGGCCAAGTAATACCCAGTTTCCCTCTTAGGTGGCGGTGTGCCTaGGTGGTGAACCACATCCTC | + |
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Preference number: 4 (lower is better) Translates to: QLKPGLNPGGQVIPSFPLRWRCA*VVNHIL Trigger: GAGGATGTGGTTCACCACCCAGGCACACCGCCACCT...AAGAGGGAAACTGGGTATTACTTGGCCACCAGGATTCAGCCCTGGTTTCAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032111.11 ENSMUST00000113936.10 |
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| CDS-3UTR CCA 90 bp | CAGTTGAAACCAGGGCTGAATCCTGGTGGCCAAGTAATACCCAGTTTCCCTCTTCACAGTGTAAGGAGGTaGCGGTGTGCCTGGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: QLKPGLNPGGQVIPSFPLHSVRR*RCAWVV Trigger: CACCACCCAGGCACACCGCCACCTCCTTACACTGTG...AAGAGGGAAACTGGGTATTACTTGGCCACCAGGATTCAGCCCTGGTTTCAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032111.11 ENSMUST00000113936.10 |
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| CDS-3UTR CCA 90 bp | GAGGGTGGGGACGGTCCCACATGGAGGACTGCAGTTGAAACCAGGGCTGAATCCCAGATGGGATTGCTGTaGATGATAAAGGATGGTATC | + |
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Preference number: 4 (lower is better) Translates to: EGGDGPTWRTAVETRAESQMGLL*MIKDGI Trigger: GATACCATCCTTTATCATCCACAGCAATCCCATCTG...GGATTCAGCCCTGGTTTCAACTGCAGTCCTCCATGTGGGACCGTCCCCACCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032111.11 |
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| CDS-3UTR CCA 90 bp | CAGTTGAAACCAGGGCTGAATCCTGGTGGCCAAGTAATACCCAGTTTCCCTCTTCCTCGCTTCCTTGAGTaGCTCACCTTCACTGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: QLKPGLNPGGQVIPSFPLPRFLE*LTFTGV Trigger: GACTCCAGTGAAGGTGAGCCACTCAAGGAAGCGAGG...AAGAGGGAAACTGGGTATTACTTGGCCACCAGGATTCAGCCCTGGTTTCAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032111.11 ENSMUST00000113936.10 |
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| CDS-3UTR GCA 90 bp | CAGTTGAAACCAGGGCTGAATCCTGGTGGCCAAGTAATACCCAGTTTCCCTCTTCTCAAGAGAAGATGCTaGCGGACTCTGCTGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: QLKPGLNPGGQVIPSFPLLKRRC*RTLLLL Trigger: CAACAGCAGCAGAGTCCGGCAGCATCTTCTCTTGAG...AAGAGGGAAACTGGGTATTACTTGGCCACCAGGATTCAGCCCTGGTTTCAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032111.11 |
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| CDS-3UTR CCA 90 bp | CAGTTGAAACCAGGGCTGAATCCTGGTGGCCAAGTAATACCCAGTTTCCCTCTTGTGGATGATAAAGGATaGTATCCAGGGCGCGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: QLKPGLNPGGQVIPSFPLVDDKG*YPGRES Trigger: AGACTCGCGCCCTGGATACCATCCTTTATCATCCAC...AAGAGGGAAACTGGGTATTACTTGGCCACCAGGATTCAGCCCTGGTTTCAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032111.11 |
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| CDS-3UTR GCA 90 bp | CAGTTGAAACCAGGGCTGAATCCTGGTGGCCAAGTAATACCCAGTTTCCCTCTTAGCTCGTCTCCAAATTaGTCCCTCAAGAGAAGATGC | + |
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Preference number: 4 (lower is better) Translates to: QLKPGLNPGGQVIPSFPLSSSPN*SLKRRC Trigger: GCATCTTCTCTTGAGGGAGCAATTTGGAGACGAGCT...AAGAGGGAAACTGGGTATTACTTGGCCACCAGGATTCAGCCCTGGTTTCAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032111.11 |
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| CDS-3UTR CAA 90 bp | GAGGGTGGGGACGGTCCCACATGGAGGACTGCAGTTGAAACCAGGGCTGAATCCCCCCATGGGAGGAACTaGGGACACAGAATCTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: EGGDGPTWRTAVETRAESPHGRN*GHRIWG Trigger: CCCCCAGATTCTGTGTCCCAAGTTCCTCCCATGGGG...GGATTCAGCCCTGGTTTCAACTGCAGTCCTCCATGTGGGACCGTCCCCACCCTC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032111.11 ENSMUST00000113936.10 |
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| CDS GCA 90 bp | GATGGTATCCAGGGCGCGAGTCTGGGTTCCAGCTCGTCTCCAAATTaGTCCCTCAAGAGAAGATGCTGCCGGACTCTGCTGTTGCGGCGC | + |
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Preference number: 5 (lower is better) Translates to: DGIQGASLGSSSSPN*SLKRRCCRTLLLRR Trigger: GCGCCGCAACAGCAGAGTCCGGCAGCATCTTCTCTTGAGGGAGCAATTTGGAGACGAGCTGGAACCCAGACTCGCGCCCTGGATACCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146328.4 |
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| CDS GCA 90 bp | GATGGTATCCAGGGCGCGAGTCTGGGTTCCAGCTCGTCTCCAAATTaGTCCCTCAAGAGAAGATGCTGCCGGACTCTGCTGCTGTTGCGG | + |
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Preference number: 5 (lower is better) Translates to: DGIQGASLGSSSSPN*SLKRRCCRTLLLLR Trigger: CCGCAACAGCAGCAGAGTCCGGCAGCATCTTCTCTTGAGGGAGCAATTTGGAGACGAGCTGGAACCCAGACTCGCGCCCTGGATACCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032111.11 ENSMUST00000151393.7 |
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| CDS-3UTR CAA 90 bp | GAGGGTGGGGACGGTCCCACATGGAGGACTGCAGTTGAAACCAGGGCTGAATCCAAACACCTTCTACATTaGTCCCCTCCAAGTGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: EGGDGPTWRTAVETRAESKHLLH*SPPSGQ Trigger: CTGCCCACTTGGAGGGGACAAATGTAGAAGGTGTTT...GGATTCAGCCCTGGTTTCAACTGCAGTCCTCCATGTGGGACCGTCCCCACCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032111.11 ENSMUST00000113936.10 |
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| CDS CCA 90 bp | GGCACAGCTCTCGAAGCAGATGGGATTGCTGTGGATGATAAAGGATaGTATCCAGGGCGCGAGTCTGGGTTCCAGCTCGTCTCCAAATTG | + |
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Preference number: 5 (lower is better) Translates to: GTALEADGIAVDDKG*YPGRESGFQLVSKL Trigger: CAATTTGGAGACGAGCTGGAACCCAGACTCGCGCCCTGGATACCATCCTTTATCATCCACAGCAATCCCATCTGCTTCGAGAGCTGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032111.11 ENSMUST00000146328.4 ENSMUST00000151393.7 |
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| CDS-3UTR CAA 90 bp | CAGTTGAAACCAGGGCTGAATCCTGGTGGCCAAGTAATACCCAGTTTCCCTCTTCCCCATGGGAGGAACTaGGGACACAGAATCTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: QLKPGLNPGGQVIPSFPLPHGRN*GHRIWG Trigger: CCCCCAGATTCTGTGTCCCAAGTTCCTCCCATGGGG...AAGAGGGAAACTGGGTATTACTTGGCCACCAGGATTCAGCCCTGGTTTCAACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032111.11 ENSMUST00000113936.10 |
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| CDS-3UTR CAA 90 bp | CAGTTGAAACCAGGGCTGAATCCTGGTGGCCAAGTAATACCCAGTTTCCCTCTTCTAGCCCTCGCTTCCTaGAGTGGCTCACCTTCACTG | + |
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Preference number: 5 (lower is better) Translates to: QLKPGLNPGGQVIPSFPLLALAS*SGSPSL Trigger: CAGTGAAGGTGAGCCACTCAAGGAAGCGAGGGCTAG...AAGAGGGAAACTGGGTATTACTTGGCCACCAGGATTCAGCCCTGGTTTCAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032111.11 ENSMUST00000113936.10 |
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| CDS-3UTR CAA 90 bp | CAGTTGAAACCAGGGCTGAATCCTGGTGGCCAAGTAATACCCAGTTTCCCTCTTCAGCTCGTCTCCAAATaGCTCCCTCAAGAGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: QLKPGLNPGGQVIPSFPLQLVSK*LPQEKM Trigger: CATCTTCTCTTGAGGGAGCAATTTGGAGACGAGCTG...AAGAGGGAAACTGGGTATTACTTGGCCACCAGGATTCAGCCCTGGTTTCAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032111.11 |
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| CDS-3UTR CAA 90 bp | CAGTTGAAACCAGGGCTGAATCCTGGTGGCCAAGTAATACCCAGTTTCCCTCTTAAACACCTTCTACATTaGTCCCCTCCAAGTGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: QLKPGLNPGGQVIPSFPLKHLLH*SPPSGQ Trigger: CTGCCCACTTGGAGGGGACAAATGTAGAAGGTGTTT...AAGAGGGAAACTGGGTATTACTTGGCCACCAGGATTCAGCCCTGGTTTCAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032111.11 ENSMUST00000113936.10 |
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| CDS-3UTR CAA 90 bp | CAGTTGAAACCAGGGCTGAATCCTGGTGGCCAAGTAATACCCAGTTTCCCTCTTTCGAAGCAGATGGGATaGCTGTGGATGATAAAGGAT | + |
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Preference number: 5 (lower is better) Translates to: QLKPGLNPGGQVIPSFPLSKQMG*LWMIKD Trigger: ATCCTTTATCATCCACAGCAATCCCATCTGCTTCGA...AAGAGGGAAACTGGGTATTACTTGGCCACCAGGATTCAGCCCTGGTTTCAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032111.11 |
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| CDS CAA 90 bp | GGATGGTATCCAGGGCGCGAGTCTGGGTTCCAGCTCGTCTCCAAATaGCTCCCTCAAGAGAAGATGCTGCCGGACTCTGCTGTTGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: GWYPGRESGFQLVSK*LPQEKMLPDSAVAA Trigger: CGCCGCAACAGCAGAGTCCGGCAGCATCTTCTCTTGAGGGAGCAATTTGGAGACGAGCTGGAACCCAGACTCGCGCCCTGGATACCATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146328.4 |
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| CDS CAA 90 bp | GGATGGTATCCAGGGCGCGAGTCTGGGTTCCAGCTCGTCTCCAAATaGCTCCCTCAAGAGAAGATGCTGCCGGACTCTGCTGCTGTTGCG | + |
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Preference number: 6 (lower is better) Translates to: GWYPGRESGFQLVSK*LPQEKMLPDSAAVA Trigger: CGCAACAGCAGCAGAGTCCGGCAGCATCTTCTCTTGAGGGAGCAATTTGGAGACGAGCTGGAACCCAGACTCGCGCCCTGGATACCATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032111.11 ENSMUST00000151393.7 |
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| CDS GCA 72 bp | TCCAGCTCGTCTCCAAATTGCTCCCTCAAGAGAAGATaGTGCCGGACTCTGCTGCTGTTGCGGCGCCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SSSSPNCSLKRR*CRTLLLLRRLK Trigger: CTTCAGGCGCCGCAACAGCAGCAGAGTCCGGCAGCATCTTCTCTTGAGGGAGCAATTTGGAGACGAGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032111.11 ENSMUST00000151393.7 |
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| CDS CCA 72 bp | CTCGAAGCAGATGGGATTGCTGTGGATGATAAAGGATaGTATCCAGGGCGCGAGTCTGGGTTCCAGCTCGTC | + |
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Preference number: 6 (lower is better) Translates to: LEADGIAVDDKG*YPGRESGFQLV Trigger: GACGAGCTGGAACCCAGACTCGCGCCCTGGATACCATCCTTTATCATCCACAGCAATCCCATCTGCTTCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032111.11 ENSMUST00000146328.4 ENSMUST00000151393.7 |
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