RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WASL (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029684

Ensembl transcript IDs: ENSMUST00000031695.15, ENSMUST00000041737.8

Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCCACAGTCTATACAGTAACATGCCGAACCCAGTGTGGCCTTGGTaGGGACAGAGTGAGACAGCTTCTGCCCCTGGAACAGGGCCCAGG +
Preference number: 1 (lower is better)
Translates to: SHSLYSNMPNPVWPW*GQSETASAPGTGPR
Trigger: CCTGGGCCCTGTTCCAGGGGCAGAAGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATGTTACTGTATAGACTGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041737.8
3UTR CCA 90 bp AAGCCAGATTCCCACAGTCTATACAGTAACATGCCGAACCCAGTGTaGCCTTGGTGGGGACAGAGTGAGACAGCTTCTGCCCCTGGAACA +
Preference number: 1 (lower is better)
Translates to: KPDSHSLYSNMPNPV*PWWGQSETASAPGT
Trigger: TGTTCCAGGGGCAGAAGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATGTTACTGTATAGACTGTGGGAATCTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041737.8
3UTR CCA 90 bp AAGACAGAAGAGGACGGAGCTGTGCAACTGACACTTTACTCAGAGTaGATTAGCCTTCATGCCTGGATGAACCCCATAGCTCCTGGAATT +
Preference number: 1 (lower is better)
Translates to: KTEEDGAVQLTLYSE*ISLHAWMNPIAPGI
Trigger: AATTCCAGGAGCTATGGGGTTCATCCAGGCATGAAGGCTAATCCACTCTGAGTAAAGTGTCAGTTGCACAGCTCCGTCCTCTTCTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
3UTR TCA 90 bp ACATTAAGGTTTGTGTCAGTCTCACACATAATTAAACTCCCTTGTTaGTGGAATGAAAATATTCACAAATCACGTGAGCATCCTGATGTA +
Preference number: 1 (lower is better)
Translates to: TLRFVSVSHIIKLPC*WNENIHKSREHPDV
Trigger: TACATCAGGATGCTCACGTGATTTGTGAATATTTTCATTCCATCAACAAGGGAGTTTAATTATGTGTGAGACTGACACAAACCTTAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
3UTR-3UTR CCA 90 bp AATTGTATGGGTAGTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCTACCTCAAACTATTTTaGGGCATGATAACAAACGTC +
Preference number: 2 (lower is better)
Translates to: NCMGSSCPASSARLRAQAYLKLF*GMITNV
Trigger: GACGTTTGTTATCATGCCCCAAAATAGTTTGAGGTA...GGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTACTACCCATACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
3UTR-3UTR TCA 90 bp TATCTCACAGGTCCAGCCTGTCAAGATCATGTCAATACTAGATTTTGGTCGGTATCTACATGTGGTACCTaGCAAAAACCTGGAGAAGCC +
Preference number: 2 (lower is better)
Translates to: YLTGPACQDHVNTRFWSVSTCGT*QKPGEA
Trigger: GGCTTCTCCAGGTTTTTGTCAGGTACCACATGTAGA...TACCGACCAAAATCTAGTATTGACATGATCTTGACAGGCTGGACCTGTGAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
3UTR-3UTR GCA 90 bp TATCTCACAGGTCCAGCCTGTCAAGATCATGTCAATACTAGATTTTGGTCGGTAATAGCCTGTCACAGTTaGCACAGCATAAAAGTCACC +
Preference number: 2 (lower is better)
Translates to: YLTGPACQDHVNTRFWSVIACHS*HSIKVT
Trigger: GGTGACTTTTATGCTGTGGCAACTGTGACAGGCTAT...TACCGACCAAAATCTAGTATTGACATGATCTTGACAGGCTGGACCTGTGAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
3UTR CAA 90 bp AAGGTCCTAGCAGCAGAGAGCACTGTTTTTACAGGAAACACAAAATaGAGAATCTTTCCAATGTGCTTCAGTTACTCTTGCAAGGAGGGT +
Preference number: 2 (lower is better)
Translates to: KVLAAESTVFTGNTK*RIFPMCFSYSCKEG
Trigger: ACCCTCCTTGCAAGAGTAACTGAAGCACATTGGAAAGATTCTCAATTTTGTGTTTCCTGTAAAAACAGTGCTCTCTGCTGCTAGGACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
3UTR CAA 90 bp ATTGTCTATCACACAGCATTTAGATATGAAAGGCCTCATGCTAGTTaGTTAAACGCAAAGGCTACCAGACAAGCACATAGCTGGATGTAT +
Preference number: 2 (lower is better)
Translates to: IVYHTAFRYERPHAS*LNAKATRQAHSWMY
Trigger: ATACATCCAGCTATGTGCTTGTCTGGTAGCCTTTGCGTTTAACAAACTAGCATGAGGCCTTTCATATCTAAATGCTGTGTGATAGACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
3UTR-3UTR GCA 90 bp ACATTCTGCATACAACTCAATGTGAGAAAAGTGTGTCTGCACTTAAATCAGATAGTGTCTAGAGAATTGTaGAATGTATCAGCTTCAACA +
Preference number: 2 (lower is better)
Translates to: TFCIQLNVRKVCLHLNQIVSREL*NVSAST
Trigger: TGTTGAAGCTGATACATTGCACAATTCTCTAGACAC...TATCTGATTTAAGTGCAGACACACTTTTCTCACATTGAGTTGTATGCAGAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
3UTR TCA 72 bp CATGCCGAACCCAGTGTGGCCTTGGTGGGGACAGAGTaGGACAGCTTCTGCCCCTGGAACAGGGCCCAGGTG +
Preference number: 3 (lower is better)
Translates to: HAEPSVALVGTE*DSFCPWNRAQV
Trigger: CACCTGGGCCCTGTTCCAGGGGCAGAAGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041737.8
3UTR GCA 72 bp GTCAAGGACAGGCACGTGAGGGCTCATCAGGGTTCCTaGCTTCGGATGCCACTGCTTACCAACGGCAGGCAG +
Preference number: 3 (lower is better)
Translates to: VKDRHVRAHQGS*LRMPLLTNGRQ
Trigger: CTGCCTGCCGTTGGTAAGCAGTGGCATCCGAAGGCAGGAACCCTGATGAGCCCTCACGTGCCTGTCCTTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
3UTR-3UTR CAA 90 bp ACAGTAACATGCCGAACCCAGTGTGGCCTTGGTGGGGACAGAGTGAGACAGCTTGAGTCCCCACGAGTGTaGATGGCTGCTGTGGGCTTA +
Preference number: 3 (lower is better)
Translates to: TVTCRTQCGLGGDRVRQLESPRV*MAAVGL
Trigger: TAAGCCCACAGCAGCCATCAACACTCGTGGGGACTC...AAGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATGTTACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041737.8
3UTR CCA 72 bp CTATACAGTAACATGCCGAACCCAGTGTGGCCTTGGTaGGGACAGAGTGAGACAGCTTCTGCCCCTGGAACA +
Preference number: 3 (lower is better)
Translates to: LYSNMPNPVWPW*GQSETASAPGT
Trigger: TGTTCCAGGGGCAGAAGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATGTTACTGTATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041737.8
3UTR TCA 72 bp GGTGCAAAACACGAAGACTCCATCCCAGCCCTGTTCTaGTACCGCTCGAGTCAGACACGAGCACGAAAGTTG +
Preference number: 3 (lower is better)
Translates to: GAKHEDSIPALF*YRSSQTRARKL
Trigger: CAACTTTCGTGCTCGTGTCTGACTCGAGCGGTATCAGAACAGGGCTGGGATGGAGTCTTCGTGTTTTGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
3UTR CCA 72 bp GAGGACGGAGCTGTGCAACTGACACTTTACTCAGAGTaGATTAGCCTTCATGCCTGGATGAACCCCATAGCT +
Preference number: 3 (lower is better)
Translates to: EDGAVQLTLYSE*ISLHAWMNPIA
Trigger: AGCTATGGGGTTCATCCAGGCATGAAGGCTAATCCACTCTGAGTAAAGTGTCAGTTGCACAGCTCCGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
3UTR TCA 72 bp CACAGTGCAAGACAGAAGAGGACGGAGCTGTGCAACTaGCACTTTACTCAGAGTGGATTAGCCTTCATGCCT +
Preference number: 3 (lower is better)
Translates to: HSARQKRTELCN*HFTQSGLAFMP
Trigger: AGGCATGAAGGCTAATCCACTCTGAGTAAAGTGTCAGTTGCACAGCTCCGTCCTCTTCTGTCTTGCACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
3UTR-3UTR CAA 90 bp TATCTCACAGGTCCAGCCTGTCAAGATCATGTCAATACTAGATTTTGGTCGGTAAGCATAAAAGTCACCTaGGTCAAGGACAGGCACGTG +
Preference number: 3 (lower is better)
Translates to: YLTGPACQDHVNTRFWSVSIKVT*VKDRHV
Trigger: CACGTGCCTGTCCTTGACCAAGGTGACTTTTATGCT...TACCGACCAAAATCTAGTATTGACATGATCTTGACAGGCTGGACCTGTGAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
3UTR-3UTR CAA 90 bp GGTAATTATCACGGTAAATATCAAACAGCCACCTTTAGGCGGATTAGTGTACTGAATAGCCTGTCACAGTaGCCACAGCATAAAAGTCAC +
Preference number: 3 (lower is better)
Translates to: GNYHGKYQTATFRRISVLNSLSQ*PQHKSH
Trigger: GTGACTTTTATGCTGTGGCAACTGTGACAGGCTATT...CAGTACACTAATCCGCCTAAAGGTGGCTGTTTGATATTTACCGTGATAATTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
3UTR-3UTR CAA 90 bp GGTAATTATCACGGTAAATATCAAACAGCCACCTTTAGGCGGATTAGTGTACTGCATTCATGCATACTTTaGCCAACACCTCTGACTCCT +
Preference number: 3 (lower is better)
Translates to: GNYHGKYQTATFRRISVLHSCIL*PTPLTP
Trigger: AGGAGTCAGAGGTGTTGGCAAAAGTATGCATGAATG...CAGTACACTAATCCGCCTAAAGGTGGCTGTTTGATATTTACCGTGATAATTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
3UTR-3UTR CAA 90 bp GGTAATTATCACGGTAAATATCAAACAGCCACCTTTAGGCGGATTAGTGTACTGGTGGTGTCTAGAGAATaGTGCAATGTATCAGCTTCA +
Preference number: 3 (lower is better)
Translates to: GNYHGKYQTATFRRISVLVVSRE*CNVSAS
Trigger: TGAAGCTGATACATTGCACAATTCTCTAGACACCAC...CAGTACACTAATCCGCCTAAAGGTGGCTGTTTGATATTTACCGTGATAATTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
3UTR TCA 72 bp AAGGTTAGCATTCATGCATACTTTTGCCAACACCTCTaGCTCCTACAGTTGGTACTTGTGAATATAGCAATG +
Preference number: 3 (lower is better)
Translates to: KVSIHAYFCQHL*LLQLVLVNIAM
Trigger: CATTGCTATATTCACAAGTACCAACTGTAGGAGTCAGAGGTGTTGGCAAAAGTATGCATGAATGCTAACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
3UTR GCA 72 bp GGCAAGGAAACCCTAATTGTAACATACCATGTAGTATaGGTAACAACTGTGCAGGCTGTGAAGTTTTATTTA +
Preference number: 3 (lower is better)
Translates to: GKETLIVTYHVV*VTTVQAVKFYL
Trigger: TAAATAAAACTTCACAGCCTGCACAGTTGTTACGCATACTACATGGTATGTTACAATTAGGGTTTCCTTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
3UTR GCA 72 bp ATTGTAACTATAATGAATACATCTGAAGCTACATTCTaGATACAACTCAATGTGAGAAAAGTGTGTCTGCAC +
Preference number: 3 (lower is better)
Translates to: IVTIMNTSEATF*IQLNVRKVCLH
Trigger: GTGCAGACACACTTTTCTCACATTGAGTTGTATGCAGAATGTAGCTTCAGATGTATTCATTATAGTTACAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
3UTR GCA 72 bp CTAGACAATAAATATCTCAGGCTATATGAACTTTGCTaGAATACTTTAACTGTTTCACAACAAACACTAGCC +
Preference number: 3 (lower is better)
Translates to: LDNKYLRLYELC*NTLTVSQQTLA
Trigger: GGCTAGTGTTTGTTGTGAAACAGTTAAAGTATTGCAGCAAAGTTCATATAGCCTGAGATATTTATTGTCTAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041737.8
CDS-3UTR TCA 90 bp GTAACATGCCGAACCCAGTGTGGCCTTGGTGGGGACAGAGTGAGACAGCTTCTGCGTTCTCTTGCGGGGTaGGCAGCAGGGAGCCCACGT +
Preference number: 4 (lower is better)
Translates to: VTCRTQCGLGGDRVRQLLRSLAG*AAGSPR
Trigger: ACGTGGGCTCCCTGCTGCTCACCCCGCAAGAGAACG...CAGAAGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATGTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041737.8
CDS-3UTR TCA 90 bp GTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCACATGAAAATGACAGGGGGAGGAGGACCTaGGCTATGAGGAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: VVVQPHPHVSELKPHENDRGRRT*AMRRGR
Trigger: CCTCCCCCTCCTCATAGCTCAGGTCCTCCTCCCCCT...GTCATTTTCATGTGGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
3UTR CAA 72 bp CCTGGAACAGGGCCCAGGTGTGAGTCCCCACGAGTGTaGATGGCTGCTGTGGGCTTAAGGCTTGCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: PGTGPRCESPRV*MAAVGLRLACV
Trigger: TACACAAGCAAGCCTTAAGCCCACAGCAGCCATCAACACTCGTGGGGACTCACACCTGGGCCCTGTTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041737.8
CDS-3UTR TCA 90 bp AATTGTATGGGTAGTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCCGCACCCACAATTCCTaGAGTGGGTGCGGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: NCMGSSCPASSARLRAQARTHNS*SGCGCW
Trigger: CCAACACCCGCACCCACTTCAGGAATTGTGGGTGCG...GGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTACTACCCATACAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CCA 90 bp AATTGTATGGGTAGTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCGGACCCTGCCATAGATaGAGGTGGAGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: NCMGSSCPASSARLRAQAGPCHR*RWRWWR
Trigger: CCTCCACCACCTCCACCTCCATCTATGGCAGGGTCC...GGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTACTACCCATACAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CCA 90 bp CTTTACTCAGAGTGGATTAGCCTTCATGCCTGGATGAACCCCATAGCTCCTGGAAGGTGGAGGAGGAGGTaGTGGTGCTGTGGACCCTGC +
Preference number: 4 (lower is better)
Translates to: LYSEWISLHAWMNPIAPGRWRRR*WCCGPC
Trigger: GCAGGGTCCACAGCACCACCACCTCCTCCTCCACCT...TCCAGGAGCTATGGGGTTCATCCAGGCATGAAGGCTAATCCACTCTGAGTAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR TCA 90 bp GTAACATGCCGAACCCAGTGTGGCCTTGGTGGGGACAGAGTGAGACAGCTTCTGTGGTTAGAAACAGCATaGGTCCAGGAGTTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VTCRTQCGLGGDRVRQLLWLETA*VQELRV
Trigger: CACCCTCAACTCCTGGACTCATGCTGTTTCTAACCA...CAGAAGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041737.8
CDS-3UTR CCA 90 bp GTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCACATGAAAATGACTCTCGAGGGTGGAGGTaGTGGTGGTGCTTGTCTTCG +
Preference number: 4 (lower is better)
Translates to: VVVQPHPHVSELKPHENDSRGWR*WWCLSS
Trigger: CGAAGACAAGCACCACCACCACCTCCACCCTCGAGA...GTCATTTTCATGTGGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR TCA 90 bp ACTGTAAAGAGGCAAGGAAACCCTAATTGTAACATACCATGTAGTATGCGTAACGGGAGCCCACGTTGGTaGCCCTCCGCGGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TVKRQGNPNCNIPCSMRNGSPRW*PSAGAA
Trigger: AGCAGCCCCCGCGGAGGGTCACCAACGTGGGCTCCC...GTTACGCATACTACATGGTATGTTACAATTAGGGTTTCCTTGCCTCTTTACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR GCA 90 bp TACAGTAACATGCCGAACCCAGTGTGGCCTTGGTGGGGACAGAGTGAGACAGCTACAGTTCCGATCTGCTaGATACAACTGCACCACTGC +
Preference number: 4 (lower is better)
Translates to: YSNMPNPVWPWWGQSETATVPIC*IQLHHC
Trigger: GCAGTGGTGCAGTTGTATGCAGCAGATCGGAACTGT...AGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATGTTACTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041737.8
CDS-3UTR GCA 90 bp GTAACATGCCGAACCCAGTGTGGCCTTGGTGGGGACAGAGTGAGACAGCTTCTGACCACTGCACTTCTTTaGCCACATACAGTTCCGATC +
Preference number: 4 (lower is better)
Translates to: VTCRTQCGLGGDRVRQLLTTALL*PHTVPI
Trigger: GATCGGAACTGTATGTGGGCAAAGAAGTGCAGTGGT...CAGAAGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041737.8
CDS-3UTR CCA 90 bp CTTTACTCAGAGTGGATTAGCCTTCATGCCTGGATGAACCCCATAGCTCCTGGAAGAAGGAGGTGGAGGTaGAGGTGCAGCAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: LYSEWISLHAWMNPIAPGRRRWR*RCSSRS
Trigger: GCTCCTACTGCTGCACCTCCACCTCCACCTCCTTCT...TCCAGGAGCTATGGGGTTCATCCAGGCATGAAGGCTAATCCACTCTGAGTAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CCA 90 bp GTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCACATGAAAATGACAGGGTACATCCTGTTTaGAGGGGGCGGAGGAACAAC +
Preference number: 4 (lower is better)
Translates to: VVVQPHPHVSELKPHENDRVHPV*RGRRNN
Trigger: GTTGTTCCTCCGCCCCCTCCAAACAGGATGTACCCT...GTCATTTTCATGTGGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CCA 90 bp AATTGTATGGGTAGTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCCGGGTGTTGGTGGTGTaGACTCTTGGCCATCAGACA +
Preference number: 4 (lower is better)
Translates to: NCMGSSCPASSARLRAQARVLVV*TLGHQT
Trigger: TGTCTGATGGCCAAGAGTCCACACCACCAACACCCG...GGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTACTACCCATACAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
3UTR CAA 72 bp ATAGCCTGTCACAGTTGCCACAGCATAAAAGTCACCTaGGTCAAGGACAGGCACGTGAGGGCTCATCAGGGT +
Preference number: 4 (lower is better)
Translates to: IACHSCHSIKVT*VKDRHVRAHQG
Trigger: ACCCTGATGAGCCCTCACGTGCCTGTCCTTGACCAAGGTGACTTTTATGCTGTGGCAACTGTGACAGGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR TCA 90 bp TATCTCACAGGTCCAGCCTGTCAAGATCATGTCAATACTAGATTTTGGTCGGTACGTTCTCTTGCGGGGTaGGCAGCAGGGAGCCCACGT +
Preference number: 4 (lower is better)
Translates to: YLTGPACQDHVNTRFWSVRSLAG*AAGSPR
Trigger: ACGTGGGCTCCCTGCTGCTCACCCCGCAAGAGAACG...TACCGACCAAAATCTAGTATTGACATGATCTTGACAGGCTGGACCTGTGAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CCA 90 bp CTTTACTCAGAGTGGATTAGCCTTCATGCCTGGATGAACCCCATAGCTCCTGGACCACAATTCCTGAAGTaGGTGCGGGTGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LYSEWISLHAWMNPIAPGPQFLK*VRVLVV
Trigger: CACCACCAACACCCGCACCCACTTCAGGAATTGTGG...TCCAGGAGCTATGGGGTTCATCCAGGCATGAAGGCTAATCCACTCTGAGTAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR TCA 90 bp TGCAATACTTTAACTGTTTCACAACAAACACTAGCCATTGACTCTATGCATATGGGGAGCCCACGTTGGTaGCCCTCCGCGGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: CNTLTVSQQTLAIDSMHMGSPRW*PSAGAA
Trigger: AGCAGCCCCCGCGGAGGGTCACCAACGTGGGCTCCC...CATATGCATAGAGTCAATGGCTAGTGTTTGTTGTGAAACAGTTAAAGTATTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041737.8
CDS-3UTR TCA 90 bp AATATTCACAAATCACGTGAGCATCCTGATGTAAACTTGCACACAGCAACAAGGAAGCGCATCCCTTCCTaGGCAGGACACGGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: NIHKSREHPDVNLHTATRKRIPS*AGHGPA
Trigger: AGCCGGCCCGTGTCCTGCTCAGGAAGGGATGCGCTT...CCTTGTTGCTGTGTGCAAGTTTACATCAGGATGCTCACGTGATTTGTGAATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CCA 90 bp TACAGTAACATGCCGAACCCAGTGTGGCCTTGGTGGGGACAGAGTGAGACAGCTTATGTCTCAGCAAAATaGTACAGGCTGGGACCTTCA +
Preference number: 4 (lower is better)
Translates to: YSNMPNPVWPWWGQSETAYVSAK*YRLGPS
Trigger: TGAAGGTCCCAGCCTGTACCATTTTGCTGAGACATA...AGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATGTTACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041737.8
CDS-3UTR TCA 90 bp GTAACATGCCGAACCCAGTGTGGCCTTGGTGGGGACAGAGTGAGACAGCTTCTGTCTCCAGCAAAGGTATaGAAATATCCTCTAGGACTA +
Preference number: 4 (lower is better)
Translates to: VTCRTQCGLGGDRVRQLLSPAKV*KYPLGL
Trigger: TAGTCCTAGAGGATATTTTCATACCTTTGCTGGAGA...CAGAAGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041737.8
CDS-3UTR GCA 90 bp AATTGTATGGGTAGTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCCATACAGTTCCGATCTaGTGCATACAACTGCACCAC +
Preference number: 4 (lower is better)
Translates to: NCMGSSCPASSARLRAQAHTVPI*CIQLHH
Trigger: GTGGTGCAGTTGTATGCAGCAGATCGGAACTGTATG...GGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTACTACCCATACAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CCA 90 bp TATCTCACAGGTCCAGCCTGTCAAGATCATGTCAATACTAGATTTTGGTCGGTAGGGTGCGGGTGTTGGTaGTGTGGACTCTTGGCCATC +
Preference number: 4 (lower is better)
Translates to: YLTGPACQDHVNTRFWSVGCGCW*CGLLAI
Trigger: GATGGCCAAGAGTCCACACCACCAACACCCGCACCC...TACCGACCAAAATCTAGTATTGACATGATCTTGACAGGCTGGACCTGTGAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CCA 90 bp TATCTCACAGGTCCAGCCTGTCAAGATCATGTCAATACTAGATTTTGGTCGGTAGGGTGGAGGTGGTGGTaGTGCTTGTCTTCGGAGTTC +
Preference number: 4 (lower is better)
Translates to: YLTGPACQDHVNTRFWSVGWRWW*CLSSEF
Trigger: GAACTCCGAAGACAAGCACCACCACCACCTCCACCC...TACCGACCAAAATCTAGTATTGACATGATCTTGACAGGCTGGACCTGTGAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CCA 90 bp AATATTCACAAATCACGTGAGCATCCTGATGTAAACTTGCACACAGCAACAAGGTCCTCCTCTCGAGGGTaGAGGTGGTGGTGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: NIHKSREHPDVNLHTATRSSSRG*RWWWCL
Trigger: CAAGCACCACCACCACCTCCACCCTCGAGAGGAGGA...CCTTGTTGCTGTGTGCAAGTTTACATCAGGATGCTCACGTGATTTGTGAATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CCA 90 bp AATATTCACAAATCACGTGAGCATCCTGATGTAAACTTGCACACAGCAACAAGGAGAGGGCAGCGCTGGTaGTGGAGGAGGGTACATCCT +
Preference number: 4 (lower is better)
Translates to: NIHKSREHPDVNLHTATRRGQRW*WRRVHP
Trigger: AGGATGTACCCTCCTCCACCACCAGCGCTGCCCTCT...CCTTGTTGCTGTGTGCAAGTTTACATCAGGATGCTCACGTGATTTGTGAATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CCA 90 bp CTTTACTCAGAGTGGATTAGCCTTCATGCCTGGATGAACCCCATAGCTCCTGGAATGCCCTGTCGTATCTaGTCTAAAAGCGCATCCCTT +
Preference number: 4 (lower is better)
Translates to: LYSEWISLHAWMNPIAPGMPCRI*SKSASL
Trigger: AAGGGATGCGCTTTTAGACCAGATACGACAGGGCAT...TCCAGGAGCTATGGGGTTCATCCAGGCATGAAGGCTAATCCACTCTGAGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CCA 90 bp GGTAATTATCACGGTAAATATCAAACAGCCACCTTTAGGCGGATTAGTGTACTGAGTGGGTGCGGGTGTTaGTGGTGTGGACTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GNYHGKYQTATFRRISVLSGCGC*WCGLLA
Trigger: GGCCAAGAGTCCACACCACCAACACCCGCACCCACT...CAGTACACTAATCCGCCTAAAGGTGGCTGTTTGATATTTACCGTGATAATTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CCA 90 bp ACTGTAAAGAGGCAAGGAAACCCTAATTGTAACATACCATGTAGTATGCGTAACCGAGGGTGGAGGTGGTaGTGGTGCTTGTCTTCGGAG +
Preference number: 4 (lower is better)
Translates to: TVKRQGNPNCNIPCSMRNRGWRW*WCLSSE
Trigger: CTCCGAAGACAAGCACCACCACCACCTCCACCCTCG...GTTACGCATACTACATGGTATGTTACAATTAGGGTTTCCTTGCCTCTTTACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CCA 90 bp GTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCACATGAAAATGACCATCTGAGGAATGAATaGCTTTGCTCCTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VVVQPHPHVSELKPHENDHLRNE*LCSFSA
Trigger: TGCAGAAAAGGAGCAAAGCCATTCATTCCTCAGATG...GTCATTTTCATGTGGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR TCA 90 bp CTTTACTCAGAGTGGATTAGCCTTCATGCCTGGATGAACCCCATAGCTCCTGGAGTCTTCATCTTCATCTaGGGAATGAATGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LYSEWISLHAWMNPIAPGVFIFI*GMNGFA
Trigger: AGCAAAGCCATTCATTCCTCAGATGAAGATGAAGAC...TCCAGGAGCTATGGGGTTCATCCAGGCATGAAGGCTAATCCACTCTGAGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR GCA 90 bp AATTGTATGGGTAGTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCAGGAATGAATGGCTTTaGTCCTTTTCTGCATCACTT +
Preference number: 4 (lower is better)
Translates to: NCMGSSCPASSARLRAQARNEWL*SFSASL
Trigger: AAGTGATGCAGAAAAGGAGCAAAGCCATTCATTCCT...GGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTACTACCCATACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR TCA 90 bp CTTTACTCAGAGTGGATTAGCCTTCATGCCTGGATGAACCCCATAGCTCCTGGATGTGGGAGATGTTGTTaGCTTGTGAACCATAAAATC +
Preference number: 4 (lower is better)
Translates to: LYSEWISLHAWMNPIAPGCGRCC*LVNHKI
Trigger: GATTTTATGGTTCACAAGTCAACAACATCTCCCACA...TCCAGGAGCTATGGGGTTCATCCAGGCATGAAGGCTAATCCACTCTGAGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR TCA 90 bp ACATTCTGCATACAACTCAATGTGAGAAAAGTGTGTCTGCACTTAAATCAGATAAGCAGTAGGAGCTCTTaGAGGTGGGGGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: TFCIQLNVRKVCLHLNQISSRSS*RWGRRS
Trigger: GCTCCTCCTCCCCCACCTTCAAGAGCTCCTACTGCT...TATCTGATTTAAGTGCAGACACACTTTTCTCACATTGAGTTGTATGCAGAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR TCA 90 bp AATATTCACAAATCACGTGAGCATCCTGATGTAAACTTGCACACAGCAACAAGGGAAGGAGCTGGAACTTaGTGGTCACCATCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: NIHKSREHPDVNLHTATREGAGT*WSPSEG
Trigger: GCCTTCTGATGGTGACCATCAAGTTCCAGCTCCTTC...CCTTGTTGCTGTGTGCAAGTTTACATCAGGATGCTCACGTGATTTGTGAATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR GCA 90 bp TATCTCACAGGTCCAGCCTGTCAAGATCATGTCAATACTAGATTTTGGTCGGTAACCACTGCACTTCTTTaGCCACATACAGTTCCGATC +
Preference number: 4 (lower is better)
Translates to: YLTGPACQDHVNTRFWSVTTALL*PHTVPI
Trigger: GATCGGAACTGTATGTGGGCAAAGAAGTGCAGTGGT...TACCGACCAAAATCTAGTATTGACATGATCTTGACAGGCTGGACCTGTGAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR GCA 90 bp ACAAAATTGAGAATCTTTCCAATGTGCTTCAGTTACTCTTGCAAGGAGGGTAACTGGAGGTGGTGGTGGTaGTTGTCTTCGGAGTTCGTT +
Preference number: 4 (lower is better)
Translates to: TKLRIFPMCFSYSCKEGNWRWWW*LSSEFV
Trigger: AACGAACTCCGAAGACAAGCACCACCACCACCTCCA...GTTACCCTCCTTGCAAGAGTAACTGAAGCACATTGGAAAGATTCTCAATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CCA 90 bp AATATTCACAAATCACGTGAGCATCCTGATGTAAACTTGCACACAGCAACAAGGTCTCTGTCTTTAAGCTaGGCCTCAGAGATCCCACAC +
Preference number: 4 (lower is better)
Translates to: NIHKSREHPDVNLHTATRSLSLS*ASEIPH
Trigger: GTGTGGGATCTCTGAGGCCCAGCTTAAAGACAGAGA...CCTTGTTGCTGTGTGCAAGTTTACATCAGGATGCTCACGTGATTTGTGAATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CCA 90 bp AATATTCACAAATCACGTGAGCATCCTGATGTAAACTTGCACACAGCAACAAGGGGTGGTGTGGACTCTTaGCCATCAGACACAGATTTC +
Preference number: 4 (lower is better)
Translates to: NIHKSREHPDVNLHTATRGGVDS*PSDTDF
Trigger: GAAATCTGTGTCTGATGGCCAAGAGTCCACACCACC...CCTTGTTGCTGTGTGCAAGTTTACATCAGGATGCTCACGTGATTTGTGAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
3UTR CAA 72 bp CACACAGCATTTAGATATGAAAGGCCTCATGCTAGTTaGTTAAACGCAAAGGCTACCAGACAAGCACATAGC +
Preference number: 4 (lower is better)
Translates to: HTAFRYERPHAS*LNAKATRQAHS
Trigger: GCTATGTGCTTGTCTGGTAGCCTTTGCGTTTAACAAACTAGCATGAGGCCTTTCATATCTAAATGCTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR TCA 90 bp GGTAATTATCACGGTAAATATCAAACAGCCACCTTTAGGCGGATTAGTGTACTGCAACTGCACCACTGCTaGAGACATAGTCACACATTT +
Preference number: 4 (lower is better)
Translates to: GNYHGKYQTATFRRISVLQLHHC*RHSHTF
Trigger: AAATGTGTGACTATGTCTTCAGCAGTGGTGCAGTTG...CAGTACACTAATCCGCCTAAAGGTGGCTGTTTGATATTTACCGTGATAATTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR GCA 90 bp AATATTCACAAATCACGTGAGCATCCTGATGTAAACTTGCACACAGCAACAAGGTCTGCTGCATACAACTaGACCACTGCTGAAGACATA +
Preference number: 4 (lower is better)
Translates to: NIHKSREHPDVNLHTATRSAAYN*TTAEDI
Trigger: TATGTCTTCAGCAGTGGTGCAGTTGTATGCAGCAGA...CCTTGTTGCTGTGTGCAAGTTTACATCAGGATGCTCACGTGATTTGTGAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR TCA 90 bp ACTGTAAAGAGGCAAGGAAACCCTAATTGTAACATACCATGTAGTATGCGTAACGACACAGATTTCAATTaGATGCCCTGTCGTATCTGG +
Preference number: 4 (lower is better)
Translates to: TVKRQGNPNCNIPCSMRNDTDFN*MPCRIW
Trigger: CCAGATACGACAGGGCATTCAATTGAAATCTGTGTC...GTTACGCATACTACATGGTATGTTACAATTAGGGTTTCCTTGCCTCTTTACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR GCA 90 bp ACATTCTGCATACAACTCAATGTGAGAAAAGTGTGTCTGCACTTAAATCAGATAACAGTTCCGATCTGCTaGATACAACTGCACCACTGC +
Preference number: 4 (lower is better)
Translates to: TFCIQLNVRKVCLHLNQITVPIC*IQLHHC
Trigger: GCAGTGGTGCAGTTGTATGCAGCAGATCGGAACTGT...TATCTGATTTAAGTGCAGACACACTTTTCTCACATTGAGTTGTATGCAGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR GCA 90 bp TATCTCACAGGTCCAGCCTGTCAAGATCATGTCAATACTAGATTTTGGTCGGTACAGATTTCAATTGAATaGCCTGTCGTATCTGGTCTA +
Preference number: 4 (lower is better)
Translates to: YLTGPACQDHVNTRFWSVQISIE*PVVSGL
Trigger: TAGACCAGATACGACAGGGCATTCAATTGAAATCTG...TACCGACCAAAATCTAGTATTGACATGATCTTGACAGGCTGGACCTGTGAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CCA 90 bp TATCTCACAGGTCCAGCCTGTCAAGATCATGTCAATACTAGATTTTGGTCGGTATTCTTTTCTTTGGTGTaGGAGATGTTGTTGACTTGT +
Preference number: 4 (lower is better)
Translates to: YLTGPACQDHVNTRFWSVFFSLV*EMLLTC
Trigger: ACAAGTCAACAACATCTCCCACACCAAAGAAAAGAA...TACCGACCAAAATCTAGTATTGACATGATCTTGACAGGCTGGACCTGTGAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CCA 90 bp AATATTCACAAATCACGTGAGCATCCTGATGTAAACTTGCACACAGCAACAAGGGTGCTGGAAATTACTTaGTGTTCCAATATCTGCCTT +
Preference number: 4 (lower is better)
Translates to: NIHKSREHPDVNLHTATRVLEIT*CSNICL
Trigger: AAGGCAGATATTGGAACACCAAGTAATTTCCAGCAC...CCTTGTTGCTGTGTGCAAGTTTACATCAGGATGCTCACGTGATTTGTGAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR TCA 90 bp ACTGTAAAGAGGCAAGGAAACCCTAATTGTAACATACCATGTAGTATGCGTAACTCTCCAGCAAAGGTATaGAAATATCCTCTAGGACTA +
Preference number: 4 (lower is better)
Translates to: TVKRQGNPNCNIPCSMRNSPAKV*KYPLGL
Trigger: TAGTCCTAGAGGATATTTTCATACCTTTGCTGGAGA...GTTACGCATACTACATGGTATGTTACAATTAGGGTTTCCTTGCCTCTTTACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR TCA 90 bp ACATTCTGCATACAACTCAATGTGAGAAAAGTGTGTCTGCACTTAAATCAGATAGCACCCTCTCTAATTTaGTCCAAAAGAGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: TFCIQLNVRKVCLHLNQIAPSLI*SKRAAL
Trigger: CAAAGCAGCTCTTTTGGATCAAATTAGAGAGGGTGC...TATCTGATTTAAGTGCAGACACACTTTTCTCACATTGAGTTGTATGCAGAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR GCA 90 bp TGCAATACTTTAACTGTTTCACAACAAACACTAGCCATTGACTCTATGCATATGTCTGCTGCATACAACTaGACCACTGCTGAAGACATA +
Preference number: 4 (lower is better)
Translates to: CNTLTVSQQTLAIDSMHMSAAYN*TTAEDI
Trigger: TATGTCTTCAGCAGTGGTGCAGTTGTATGCAGCAGA...CATATGCATAGAGTCAATGGCTAGTGTTTGTTGTGAAACAGTTAAAGTATTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041737.8
CDS-3UTR CCA 90 bp ACATTCTGCATACAACTCAATGTGAGAAAAGTGTGTCTGCACTTAAATCAGATAATCAAAACCTGTATTTaGATCCCATCCAACATGCCC +
Preference number: 4 (lower is better)
Translates to: TFCIQLNVRKVCLHLNQIIKTCI*IPSNMP
Trigger: GGGCATGTTGGATGGGATCCAAATACAGGTTTTGAT...TATCTGATTTAAGTGCAGACACACTTTTCTCACATTGAGTTGTATGCAGAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CAA 90 bp GTAACATGCCGAACCCAGTGTGGCCTTGGTGGGGACAGAGTGAGACAGCTTCTGAGCAGGGAGCCCACGTaGGTGACCCTCCGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: VTCRTQCGLGGDRVRQLLSREPT*VTLRGG
Trigger: GCCCCCGCGGAGGGTCACCAACGTGGGCTCCCTGCT...CAGAAGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATGTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041737.8
CDS GCA 90 bp GTCACACATTTCTTGCCGAGGAAGGAGAAGAGAGACTCGTTCTCTTaGGGGGTGAGCAGCAGGGAGCCCACGTTGGTGACCCTCCGCGGG +
Preference number: 5 (lower is better)
Translates to: VTHFLPRKEKRDSFS*GVSSREPTLVTLRG
Trigger: CCCGCGGAGGGTCACCAACGTGGGCTCCCTGCTGCTCACCCCGCAAGAGAACGAGTCTCTCTTCTCCTTCCTCGGCAAGAAATGTGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031695.15
ENSMUST00000041737.8
CDS GCA 90 bp AGGAGGAGGGGGAGGTCCTCCTCTCGAGGGTGGAGGTGGTGGTGGTaGTTGTCTTCGGAGTTCGTTTTTAACAGCTTCTACACCTCCTGT +
Preference number: 5 (lower is better)
Translates to: RRRGRSSSRGWRWWW*LSSEFVFNSFYTSC
Trigger: ACAGGAGGTGTAGAAGCTGTTAAAAACGAACTCCGAAGACAAGCACCACCACCACCTCCACCCTCGAGAGGAGGACCTCCCCCTCCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CAA 90 bp TATCTCACAGGTCCAGCCTGTCAAGATCATGTCAATACTAGATTTTGGTCGGTAAGCAGGGAGCCCACGTaGGTGACCCTCCGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: YLTGPACQDHVNTRFWSVSREPT*VTLRGG
Trigger: GCCCCCGCGGAGGGTCACCAACGTGGGCTCCCTGCT...TACCGACCAAAATCTAGTATTGACATGATCTTGACAGGCTGGACCTGTGAGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CAA 90 bp GTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCACATGAAAATGACGAGAGACTCGTTCTCTaGCGGGGTGAGCAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: VVVQPHPHVSELKPHENDERLVL*RGEQQG
Trigger: TCCCTGCTGCTCACCCCGCAAGAGAACGAGTCTCTC...GTCATTTTCATGTGGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS CCA 90 bp TCAGCGCACCCACAATTCCTGAAGTGGGTGCGGGTGTTGGTGGTGTaGACTCTTGGCCATCAGACACAGATTTCAATTGAATGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: SAHPQFLKWVRVLVV*TLGHQTQISIECPV
Trigger: GACAGGGCATTCAATTGAAATCTGTGTCTGATGGCCAAGAGTCCACACCACCAACACCCGCACCCACTTCAGGAATTGTGGGTGCGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS GCA 90 bp CTGAGGATTGTCCTTAACCAGACAAGCGACACCACTGCACTTCTTTaGCCACATACAGTTCCGATCTGCTGCATACAACTGCACCACTGC +
Preference number: 5 (lower is better)
Translates to: LRIVLNQTSDTTALL*PHTVPICCIQLHHC
Trigger: GCAGTGGTGCAGTTGTATGCAGCAGATCGGAACTGTATGTGGGCAAAGAAGTGCAGTGGTGTCGCTTGTCTGGTTAAGGACAATCCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031695.15
ENSMUST00000041737.8
CDS-3UTR CAA 90 bp GTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCACATGAAAATGACAGGTGGTGGTGGTGCTaGTCTTCGGAGTTCGTTTTT +
Preference number: 5 (lower is better)
Translates to: VVVQPHPHVSELKPHENDRWWWC*SSEFVF
Trigger: AAAAACGAACTCCGAAGACAAGCACCACCACCACCT...GTCATTTTCATGTGGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CAA 90 bp GTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCACATGAAAATGACTGGTGGTGTGGACTCTaGGCCATCAGACACAGATTT +
Preference number: 5 (lower is better)
Translates to: VVVQPHPHVSELKPHENDWWCGL*AIRHRF
Trigger: AAATCTGTGTCTGATGGCCAAGAGTCCACACCACCA...GTCATTTTCATGTGGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CAA 90 bp AATTGTATGGGTAGTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCTTTTTCAGATTTCCTTaGTCGTCGGCCCAACAGGTC +
Preference number: 5 (lower is better)
Translates to: NCMGSSCPASSARLRAQAFFRFP*SSAQQV
Trigger: GACCTGTTGGGCCGACGACAAAGGAAATCTGAAAAA...GGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTACTACCCATACAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS GCA 90 bp CTGCACTTCTTTGCCCACATACAGTTCCGATCTGCTGCATACAACTaGACCACTGCTGAAGACATAGTCACACATTTCTTGCCGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LHFFAHIQFRSAAYN*TTAEDIVTHFLPRK
Trigger: CTTCCTCGGCAAGAAATGTGTGACTATGTCTTCAGCAGTGGTGCAGTTGTATGCAGCAGATCGGAACTGTATGTGGGCAAAGAAGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031695.15
ENSMUST00000041737.8
CDS-3UTR CAA 90 bp CTTTACTCAGAGTGGATTAGCCTTCATGCCTGGATGAACCCCATAGCTCCTGGAAGCACCCTCTCTAATTaGATCCAAAAGAGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: LYSEWISLHAWMNPIAPGSTLSN*IQKSCF
Trigger: AAAGCAGCTCTTTTGGATCAAATTAGAGAGGGTGCT...TCCAGGAGCTATGGGGTTCATCCAGGCATGAAGGCTAATCCACTCTGAGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CAA 90 bp TGCAATACTTTAACTGTTTCACAACAAACACTAGCCATTGACTCTATGCATATGGAGAGACTCGTTCTCTaGCGGGGTGAGCAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: CNTLTVSQQTLAIDSMHMERLVL*RGEQQG
Trigger: TCCCTGCTGCTCACCCCGCAAGAGAACGAGTCTCTC...CATATGCATAGAGTCAATGGCTAGTGTTTGTTGTGAAACAGTTAAAGTATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041737.8
CDS-3UTR CAA 90 bp AATATTCACAAATCACGTGAGCATCCTGATGTAAACTTGCACACAGCAACAAGGATAGTCACACATTTCTaGCCGAGGAAGGAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: NIHKSREHPDVNLHTATRIVTHF*PRKEKR
Trigger: TCTCTTCTCCTTCCTCGGCAAGAAATGTGTGACTAT...CCTTGTTGCTGTGTGCAAGTTTACATCAGGATGCTCACGTGATTTGTGAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CAA 90 bp GGTAATTATCACGGTAAATATCAAACAGCCACCTTTAGGCGGATTAGTGTACTGGATCAAAACCTGTATTaGGATCCCATCCAACATGCC +
Preference number: 5 (lower is better)
Translates to: GNYHGKYQTATFRRISVLDQNLY*DPIQHA
Trigger: GGCATGTTGGATGGGATCCAAATACAGGTTTTGATC...CAGTACACTAATCCGCCTAAAGGTGGCTGTTTGATATTTACCGTGATAATTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CAA 90 bp TATCTCACAGGTCCAGCCTGTCAAGATCATGTCAATACTAGATTTTGGTCGGTAAGACACAGATTTCAATaGAATGCCCTGTCGTATCTG +
Preference number: 5 (lower is better)
Translates to: YLTGPACQDHVNTRFWSVRHRFQ*NALSYL
Trigger: CAGATACGACAGGGCATTCAATTGAAATCTGTGTCT...TACCGACCAAAATCTAGTATTGACATGATCTTGACAGGCTGGACCTGTGAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS-3UTR CAA 90 bp ACAAAATTGAGAATCTTTCCAATGTGCTTCAGTTACTCTTGCAAGGAGGGTAACCCTTTCTTCTTTTCTTaGGTGTGGGAGATGTTGTTG +
Preference number: 5 (lower is better)
Translates to: TKLRIFPMCFSYSCKEGNPFFFS*VWEMLL
Trigger: CAACAACATCTCCCACACCAAAGAAAAGAAGAAAGG...GTTACCCTCCTTGCAAGAGTAACTGAAGCACATTGGAAAGATTCTCAATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS CAA 72 bp TCGTTCTCTTGCGGGGTGAGCAGCAGGGAGCCCACGTaGGTGACCCTCCGCGGGGGCTGCTGGCCCGAGCTC +
Preference number: 6 (lower is better)
Translates to: SFSCGVSSREPT*VTLRGGCWPEL
Trigger: GAGCTCGGGCCAGCAGCCCCCGCGGAGGGTCACCAACGTGGGCTCCCTGCTGCTCACCCCGCAAGAGAACGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031695.15
ENSMUST00000041737.8
CDS CCA 72 bp AGGGGGAGGAGGAGGGGGAGGTCCTCCTCTCGAGGGTaGAGGTGGTGGTGGTGCTTGTCTTCGGAGTTCGTT +
Preference number: 6 (lower is better)
Translates to: RGRRRGRSSSRG*RWWWCLSSEFV
Trigger: AACGAACTCCGAAGACAAGCACCACCACCACCTCCACCCTCGAGAGGAGGACCTCCCCCTCCTCCTCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS CCA 72 bp GGGCAGCGCTGGTGGTGGAGGAGGGTACATCCTGTTTaGAGGGGGCGGAGGAACAACAACACCAGGCCTAGA +
Preference number: 6 (lower is better)
Translates to: GQRWWWRRVHPV*RGRRNNNTRPR
Trigger: TCTAGGCCTGGTGTTGTTGTTCCTCCGCCCCCTCCAAACAGGATGTACCCTCCTCCACCACCAGCGCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS CAA 90 bp AGTCACACATTTCTTGCCGAGGAAGGAGAAGAGAGACTCGTTCTCTaGCGGGGTGAGCAGCAGGGAGCCCACGTTGGTGACCCTCCGCGG +
Preference number: 6 (lower is better)
Translates to: SHTFLAEEGEERLVL*RGEQQGAHVGDPPR
Trigger: CCGCGGAGGGTCACCAACGTGGGCTCCCTGCTGCTCACCCCGCAAGAGAACGAGTCTCTCTTCTCCTTCCTCGGCAAGAAATGTGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031695.15
ENSMUST00000041737.8
CDS CCA 72 bp AGGAGGGGGAGGTCCTCCTCTCGAGGGTGGAGGTGGTaGTGGTGCTTGTCTTCGGAGTTCGTTTTTAACAGC +
Preference number: 6 (lower is better)
Translates to: RRGRSSSRGWRW*WCLSSEFVFNS
Trigger: GCTGTTAAAAACGAACTCCGAAGACAAGCACCACCACCACCTCCACCCTCGAGAGGAGGACCTCCCCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS CCA 72 bp AGGAGGAGGGGGAGGTCCTCCTCTCGAGGGTGGAGGTaGTGGTGGTGCTTGTCTTCGGAGTTCGTTTTTAAC +
Preference number: 6 (lower is better)
Translates to: RRRGRSSSRGWR*WWCLSSEFVFN
Trigger: GTTAAAAACGAACTCCGAAGACAAGCACCACCACCACCTCCACCCTCGAGAGGAGGACCTCCCCCTCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS GCA 72 bp GTCCTTAACCAGACAAGCGACACCACTGCACTTCTTTaGCCACATACAGTTCCGATCTGCTGCATACAACTG +
Preference number: 6 (lower is better)
Translates to: VLNQTSDTTALL*PHTVPICCIQL
Trigger: CAGTTGTATGCAGCAGATCGGAACTGTATGTGGGCAAAGAAGTGCAGTGGTGTCGCTTGTCTGGTTAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031695.15
ENSMUST00000041737.8
CDS CCA 72 bp CCACAATTCCTGAAGTGGGTGCGGGTGTTGGTGGTGTaGACTCTTGGCCATCAGACACAGATTTCAATTGAA +
Preference number: 6 (lower is better)
Translates to: PQFLKWVRVLVV*TLGHQTQISIE
Trigger: TTCAATTGAAATCTGTGTCTGATGGCCAAGAGTCCACACCACCAACACCCGCACCCACTTCAGGAATTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS TCA 72 bp ACAGTTCCGATCTGCTGCATACAACTGCACCACTGCTaGAGACATAGTCACACATTTCTTGCCGAGGAAGGA +
Preference number: 6 (lower is better)
Translates to: TVPICCIQLHHC*RHSHTFLAEEG
Trigger: TCCTTCCTCGGCAAGAAATGTGTGACTATGTCTTCAGCAGTGGTGCAGTTGTATGCAGCAGATCGGAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031695.15
ENSMUST00000041737.8
CDS TCA 72 bp GGTGTGGACTCTTGGCCATCAGACACAGATTTCAATTaGATGCCCTGTCGTATCTGGTCTAAAAGCGCATCC +
Preference number: 6 (lower is better)
Translates to: GVDSWPSDTDFN*MPCRIWSKSAS
Trigger: GGATGCGCTTTTAGACCAGATACGACAGGGCATTCAATTGAAATCTGTGTCTGATGGCCAAGAGTCCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS GCA 72 bp TGGACTCTTGGCCATCAGACACAGATTTCAATTGAATaGCCTGTCGTATCTGGTCTAAAAGCGCATCCCTTC +
Preference number: 6 (lower is better)
Translates to: WTLGHQTQISIE*PVVSGLKAHPF
Trigger: GAAGGGATGCGCTTTTAGACCAGATACGACAGGGCATTCAATTGAAATCTGTGTCTGATGGCCAAGAGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15
CDS GCA 72 bp TTTGCCCACATACAGTTCCGATCTGCTGCATACAACTaGACCACTGCTGAAGACATAGTCACACATTTCTTG +
Preference number: 6 (lower is better)
Translates to: FAHIQFRSAAYN*TTAEDIVTHFL
Trigger: CAAGAAATGTGTGACTATGTCTTCAGCAGTGGTGCAGTTGTATGCAGCAGATCGGAACTGTATGTGGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031695.15
ENSMUST00000041737.8
CDS TCA 72 bp CTTCTTTTCTTTGGTGTGGGAGATGTTGTTGACTTGTaGACCATAAAATCTATTTGTTGTGATTTCTGGATT +
Preference number: 6 (lower is better)
Translates to: LLFFGVGDVVDL*TIKSICCDFWI
Trigger: AATCCAGAAATCACAACAAATAGATTTTATGGTTCACAAGTCAACAACATCTCCCACACCAAAGAAAAGAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031695.15