Pregenerated sensors for WASL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029684Ensembl transcript IDs: ENSMUST00000031695.15, ENSMUST00000041737.8
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TCCCACAGTCTATACAGTAACATGCCGAACCCAGTGTGGCCTTGGTaGGGACAGAGTGAGACAGCTTCTGCCCCTGGAACAGGGCCCAGG | + |
Preference number: 1 (lower is better) Translates to: SHSLYSNMPNPVWPW*GQSETASAPGTGPR Trigger: CCTGGGCCCTGTTCCAGGGGCAGAAGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATGTTACTGTATAGACTGTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041737.8 |
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3UTR CCA 90 bp | AAGCCAGATTCCCACAGTCTATACAGTAACATGCCGAACCCAGTGTaGCCTTGGTGGGGACAGAGTGAGACAGCTTCTGCCCCTGGAACA | + |
Preference number: 1 (lower is better) Translates to: KPDSHSLYSNMPNPV*PWWGQSETASAPGT Trigger: TGTTCCAGGGGCAGAAGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATGTTACTGTATAGACTGTGGGAATCTGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041737.8 |
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3UTR CCA 90 bp | AAGACAGAAGAGGACGGAGCTGTGCAACTGACACTTTACTCAGAGTaGATTAGCCTTCATGCCTGGATGAACCCCATAGCTCCTGGAATT | + |
Preference number: 1 (lower is better) Translates to: KTEEDGAVQLTLYSE*ISLHAWMNPIAPGI Trigger: AATTCCAGGAGCTATGGGGTTCATCCAGGCATGAAGGCTAATCCACTCTGAGTAAAGTGTCAGTTGCACAGCTCCGTCCTCTTCTGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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3UTR TCA 90 bp | ACATTAAGGTTTGTGTCAGTCTCACACATAATTAAACTCCCTTGTTaGTGGAATGAAAATATTCACAAATCACGTGAGCATCCTGATGTA | + |
Preference number: 1 (lower is better) Translates to: TLRFVSVSHIIKLPC*WNENIHKSREHPDV Trigger: TACATCAGGATGCTCACGTGATTTGTGAATATTTTCATTCCATCAACAAGGGAGTTTAATTATGTGTGAGACTGACACAAACCTTAATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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3UTR-3UTR CCA 90 bp | AATTGTATGGGTAGTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCTACCTCAAACTATTTTaGGGCATGATAACAAACGTC | + |
Preference number: 2 (lower is better) Translates to: NCMGSSCPASSARLRAQAYLKLF*GMITNV Trigger: GACGTTTGTTATCATGCCCCAAAATAGTTTGAGGTA...GGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTACTACCCATACAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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3UTR-3UTR TCA 90 bp | TATCTCACAGGTCCAGCCTGTCAAGATCATGTCAATACTAGATTTTGGTCGGTATCTACATGTGGTACCTaGCAAAAACCTGGAGAAGCC | + |
Preference number: 2 (lower is better) Translates to: YLTGPACQDHVNTRFWSVSTCGT*QKPGEA Trigger: GGCTTCTCCAGGTTTTTGTCAGGTACCACATGTAGA...TACCGACCAAAATCTAGTATTGACATGATCTTGACAGGCTGGACCTGTGAGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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3UTR-3UTR GCA 90 bp | TATCTCACAGGTCCAGCCTGTCAAGATCATGTCAATACTAGATTTTGGTCGGTAATAGCCTGTCACAGTTaGCACAGCATAAAAGTCACC | + |
Preference number: 2 (lower is better) Translates to: YLTGPACQDHVNTRFWSVIACHS*HSIKVT Trigger: GGTGACTTTTATGCTGTGGCAACTGTGACAGGCTAT...TACCGACCAAAATCTAGTATTGACATGATCTTGACAGGCTGGACCTGTGAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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3UTR CAA 90 bp | AAGGTCCTAGCAGCAGAGAGCACTGTTTTTACAGGAAACACAAAATaGAGAATCTTTCCAATGTGCTTCAGTTACTCTTGCAAGGAGGGT | + |
Preference number: 2 (lower is better) Translates to: KVLAAESTVFTGNTK*RIFPMCFSYSCKEG Trigger: ACCCTCCTTGCAAGAGTAACTGAAGCACATTGGAAAGATTCTCAATTTTGTGTTTCCTGTAAAAACAGTGCTCTCTGCTGCTAGGACCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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3UTR CAA 90 bp | ATTGTCTATCACACAGCATTTAGATATGAAAGGCCTCATGCTAGTTaGTTAAACGCAAAGGCTACCAGACAAGCACATAGCTGGATGTAT | + |
Preference number: 2 (lower is better) Translates to: IVYHTAFRYERPHAS*LNAKATRQAHSWMY Trigger: ATACATCCAGCTATGTGCTTGTCTGGTAGCCTTTGCGTTTAACAAACTAGCATGAGGCCTTTCATATCTAAATGCTGTGTGATAGACAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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3UTR-3UTR GCA 90 bp | ACATTCTGCATACAACTCAATGTGAGAAAAGTGTGTCTGCACTTAAATCAGATAGTGTCTAGAGAATTGTaGAATGTATCAGCTTCAACA | + |
Preference number: 2 (lower is better) Translates to: TFCIQLNVRKVCLHLNQIVSREL*NVSAST Trigger: TGTTGAAGCTGATACATTGCACAATTCTCTAGACAC...TATCTGATTTAAGTGCAGACACACTTTTCTCACATTGAGTTGTATGCAGAATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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3UTR TCA 72 bp | CATGCCGAACCCAGTGTGGCCTTGGTGGGGACAGAGTaGGACAGCTTCTGCCCCTGGAACAGGGCCCAGGTG | + |
Preference number: 3 (lower is better) Translates to: HAEPSVALVGTE*DSFCPWNRAQV Trigger: CACCTGGGCCCTGTTCCAGGGGCAGAAGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041737.8 |
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3UTR GCA 72 bp | GTCAAGGACAGGCACGTGAGGGCTCATCAGGGTTCCTaGCTTCGGATGCCACTGCTTACCAACGGCAGGCAG | + |
Preference number: 3 (lower is better) Translates to: VKDRHVRAHQGS*LRMPLLTNGRQ Trigger: CTGCCTGCCGTTGGTAAGCAGTGGCATCCGAAGGCAGGAACCCTGATGAGCCCTCACGTGCCTGTCCTTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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3UTR-3UTR CAA 90 bp | ACAGTAACATGCCGAACCCAGTGTGGCCTTGGTGGGGACAGAGTGAGACAGCTTGAGTCCCCACGAGTGTaGATGGCTGCTGTGGGCTTA | + |
Preference number: 3 (lower is better) Translates to: TVTCRTQCGLGGDRVRQLESPRV*MAAVGL Trigger: TAAGCCCACAGCAGCCATCAACACTCGTGGGGACTC...AAGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATGTTACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041737.8 |
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3UTR CCA 72 bp | CTATACAGTAACATGCCGAACCCAGTGTGGCCTTGGTaGGGACAGAGTGAGACAGCTTCTGCCCCTGGAACA | + |
Preference number: 3 (lower is better) Translates to: LYSNMPNPVWPW*GQSETASAPGT Trigger: TGTTCCAGGGGCAGAAGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATGTTACTGTATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041737.8 |
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3UTR TCA 72 bp | GGTGCAAAACACGAAGACTCCATCCCAGCCCTGTTCTaGTACCGCTCGAGTCAGACACGAGCACGAAAGTTG | + |
Preference number: 3 (lower is better) Translates to: GAKHEDSIPALF*YRSSQTRARKL Trigger: CAACTTTCGTGCTCGTGTCTGACTCGAGCGGTATCAGAACAGGGCTGGGATGGAGTCTTCGTGTTTTGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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3UTR CCA 72 bp | GAGGACGGAGCTGTGCAACTGACACTTTACTCAGAGTaGATTAGCCTTCATGCCTGGATGAACCCCATAGCT | + |
Preference number: 3 (lower is better) Translates to: EDGAVQLTLYSE*ISLHAWMNPIA Trigger: AGCTATGGGGTTCATCCAGGCATGAAGGCTAATCCACTCTGAGTAAAGTGTCAGTTGCACAGCTCCGTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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3UTR TCA 72 bp | CACAGTGCAAGACAGAAGAGGACGGAGCTGTGCAACTaGCACTTTACTCAGAGTGGATTAGCCTTCATGCCT | + |
Preference number: 3 (lower is better) Translates to: HSARQKRTELCN*HFTQSGLAFMP Trigger: AGGCATGAAGGCTAATCCACTCTGAGTAAAGTGTCAGTTGCACAGCTCCGTCCTCTTCTGTCTTGCACTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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3UTR-3UTR CAA 90 bp | TATCTCACAGGTCCAGCCTGTCAAGATCATGTCAATACTAGATTTTGGTCGGTAAGCATAAAAGTCACCTaGGTCAAGGACAGGCACGTG | + |
Preference number: 3 (lower is better) Translates to: YLTGPACQDHVNTRFWSVSIKVT*VKDRHV Trigger: CACGTGCCTGTCCTTGACCAAGGTGACTTTTATGCT...TACCGACCAAAATCTAGTATTGACATGATCTTGACAGGCTGGACCTGTGAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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3UTR-3UTR CAA 90 bp | GGTAATTATCACGGTAAATATCAAACAGCCACCTTTAGGCGGATTAGTGTACTGAATAGCCTGTCACAGTaGCCACAGCATAAAAGTCAC | + |
Preference number: 3 (lower is better) Translates to: GNYHGKYQTATFRRISVLNSLSQ*PQHKSH Trigger: GTGACTTTTATGCTGTGGCAACTGTGACAGGCTATT...CAGTACACTAATCCGCCTAAAGGTGGCTGTTTGATATTTACCGTGATAATTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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3UTR-3UTR CAA 90 bp | GGTAATTATCACGGTAAATATCAAACAGCCACCTTTAGGCGGATTAGTGTACTGCATTCATGCATACTTTaGCCAACACCTCTGACTCCT | + |
Preference number: 3 (lower is better) Translates to: GNYHGKYQTATFRRISVLHSCIL*PTPLTP Trigger: AGGAGTCAGAGGTGTTGGCAAAAGTATGCATGAATG...CAGTACACTAATCCGCCTAAAGGTGGCTGTTTGATATTTACCGTGATAATTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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3UTR-3UTR CAA 90 bp | GGTAATTATCACGGTAAATATCAAACAGCCACCTTTAGGCGGATTAGTGTACTGGTGGTGTCTAGAGAATaGTGCAATGTATCAGCTTCA | + |
Preference number: 3 (lower is better) Translates to: GNYHGKYQTATFRRISVLVVSRE*CNVSAS Trigger: TGAAGCTGATACATTGCACAATTCTCTAGACACCAC...CAGTACACTAATCCGCCTAAAGGTGGCTGTTTGATATTTACCGTGATAATTACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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3UTR TCA 72 bp | AAGGTTAGCATTCATGCATACTTTTGCCAACACCTCTaGCTCCTACAGTTGGTACTTGTGAATATAGCAATG | + |
Preference number: 3 (lower is better) Translates to: KVSIHAYFCQHL*LLQLVLVNIAM Trigger: CATTGCTATATTCACAAGTACCAACTGTAGGAGTCAGAGGTGTTGGCAAAAGTATGCATGAATGCTAACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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3UTR GCA 72 bp | GGCAAGGAAACCCTAATTGTAACATACCATGTAGTATaGGTAACAACTGTGCAGGCTGTGAAGTTTTATTTA | + |
Preference number: 3 (lower is better) Translates to: GKETLIVTYHVV*VTTVQAVKFYL Trigger: TAAATAAAACTTCACAGCCTGCACAGTTGTTACGCATACTACATGGTATGTTACAATTAGGGTTTCCTTGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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3UTR GCA 72 bp | ATTGTAACTATAATGAATACATCTGAAGCTACATTCTaGATACAACTCAATGTGAGAAAAGTGTGTCTGCAC | + |
Preference number: 3 (lower is better) Translates to: IVTIMNTSEATF*IQLNVRKVCLH Trigger: GTGCAGACACACTTTTCTCACATTGAGTTGTATGCAGAATGTAGCTTCAGATGTATTCATTATAGTTACAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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3UTR GCA 72 bp | CTAGACAATAAATATCTCAGGCTATATGAACTTTGCTaGAATACTTTAACTGTTTCACAACAAACACTAGCC | + |
Preference number: 3 (lower is better) Translates to: LDNKYLRLYELC*NTLTVSQQTLA Trigger: GGCTAGTGTTTGTTGTGAAACAGTTAAAGTATTGCAGCAAAGTTCATATAGCCTGAGATATTTATTGTCTAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041737.8 |
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CDS-3UTR TCA 90 bp | GTAACATGCCGAACCCAGTGTGGCCTTGGTGGGGACAGAGTGAGACAGCTTCTGCGTTCTCTTGCGGGGTaGGCAGCAGGGAGCCCACGT | + |
Preference number: 4 (lower is better) Translates to: VTCRTQCGLGGDRVRQLLRSLAG*AAGSPR Trigger: ACGTGGGCTCCCTGCTGCTCACCCCGCAAGAGAACG...CAGAAGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATGTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041737.8 |
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CDS-3UTR TCA 90 bp | GTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCACATGAAAATGACAGGGGGAGGAGGACCTaGGCTATGAGGAGGGGGAGG | + |
Preference number: 4 (lower is better) Translates to: VVVQPHPHVSELKPHENDRGRRT*AMRRGR Trigger: CCTCCCCCTCCTCATAGCTCAGGTCCTCCTCCCCCT...GTCATTTTCATGTGGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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3UTR CAA 72 bp | CCTGGAACAGGGCCCAGGTGTGAGTCCCCACGAGTGTaGATGGCTGCTGTGGGCTTAAGGCTTGCTTGTGTA | + |
Preference number: 4 (lower is better) Translates to: PGTGPRCESPRV*MAAVGLRLACV Trigger: TACACAAGCAAGCCTTAAGCCCACAGCAGCCATCAACACTCGTGGGGACTCACACCTGGGCCCTGTTCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041737.8 |
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CDS-3UTR TCA 90 bp | AATTGTATGGGTAGTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCCGCACCCACAATTCCTaGAGTGGGTGCGGGTGTTGG | + |
Preference number: 4 (lower is better) Translates to: NCMGSSCPASSARLRAQARTHNS*SGCGCW Trigger: CCAACACCCGCACCCACTTCAGGAATTGTGGGTGCG...GGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTACTACCCATACAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CCA 90 bp | AATTGTATGGGTAGTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCGGACCCTGCCATAGATaGAGGTGGAGGTGGTGGAGG | + |
Preference number: 4 (lower is better) Translates to: NCMGSSCPASSARLRAQAGPCHR*RWRWWR Trigger: CCTCCACCACCTCCACCTCCATCTATGGCAGGGTCC...GGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTACTACCCATACAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CCA 90 bp | CTTTACTCAGAGTGGATTAGCCTTCATGCCTGGATGAACCCCATAGCTCCTGGAAGGTGGAGGAGGAGGTaGTGGTGCTGTGGACCCTGC | + |
Preference number: 4 (lower is better) Translates to: LYSEWISLHAWMNPIAPGRWRRR*WCCGPC Trigger: GCAGGGTCCACAGCACCACCACCTCCTCCTCCACCT...TCCAGGAGCTATGGGGTTCATCCAGGCATGAAGGCTAATCCACTCTGAGTAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR TCA 90 bp | GTAACATGCCGAACCCAGTGTGGCCTTGGTGGGGACAGAGTGAGACAGCTTCTGTGGTTAGAAACAGCATaGGTCCAGGAGTTGAGGGTG | + |
Preference number: 4 (lower is better) Translates to: VTCRTQCGLGGDRVRQLLWLETA*VQELRV Trigger: CACCCTCAACTCCTGGACTCATGCTGTTTCTAACCA...CAGAAGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATGTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041737.8 |
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CDS-3UTR CCA 90 bp | GTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCACATGAAAATGACTCTCGAGGGTGGAGGTaGTGGTGGTGCTTGTCTTCG | + |
Preference number: 4 (lower is better) Translates to: VVVQPHPHVSELKPHENDSRGWR*WWCLSS Trigger: CGAAGACAAGCACCACCACCACCTCCACCCTCGAGA...GTCATTTTCATGTGGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR TCA 90 bp | ACTGTAAAGAGGCAAGGAAACCCTAATTGTAACATACCATGTAGTATGCGTAACGGGAGCCCACGTTGGTaGCCCTCCGCGGGGGCTGCT | + |
Preference number: 4 (lower is better) Translates to: TVKRQGNPNCNIPCSMRNGSPRW*PSAGAA Trigger: AGCAGCCCCCGCGGAGGGTCACCAACGTGGGCTCCC...GTTACGCATACTACATGGTATGTTACAATTAGGGTTTCCTTGCCTCTTTACAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR GCA 90 bp | TACAGTAACATGCCGAACCCAGTGTGGCCTTGGTGGGGACAGAGTGAGACAGCTACAGTTCCGATCTGCTaGATACAACTGCACCACTGC | + |
Preference number: 4 (lower is better) Translates to: YSNMPNPVWPWWGQSETATVPIC*IQLHHC Trigger: GCAGTGGTGCAGTTGTATGCAGCAGATCGGAACTGT...AGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATGTTACTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041737.8 |
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CDS-3UTR GCA 90 bp | GTAACATGCCGAACCCAGTGTGGCCTTGGTGGGGACAGAGTGAGACAGCTTCTGACCACTGCACTTCTTTaGCCACATACAGTTCCGATC | + |
Preference number: 4 (lower is better) Translates to: VTCRTQCGLGGDRVRQLLTTALL*PHTVPI Trigger: GATCGGAACTGTATGTGGGCAAAGAAGTGCAGTGGT...CAGAAGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATGTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041737.8 |
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CDS-3UTR CCA 90 bp | CTTTACTCAGAGTGGATTAGCCTTCATGCCTGGATGAACCCCATAGCTCCTGGAAGAAGGAGGTGGAGGTaGAGGTGCAGCAGTAGGAGC | + |
Preference number: 4 (lower is better) Translates to: LYSEWISLHAWMNPIAPGRRRWR*RCSSRS Trigger: GCTCCTACTGCTGCACCTCCACCTCCACCTCCTTCT...TCCAGGAGCTATGGGGTTCATCCAGGCATGAAGGCTAATCCACTCTGAGTAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CCA 90 bp | GTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCACATGAAAATGACAGGGTACATCCTGTTTaGAGGGGGCGGAGGAACAAC | + |
Preference number: 4 (lower is better) Translates to: VVVQPHPHVSELKPHENDRVHPV*RGRRNN Trigger: GTTGTTCCTCCGCCCCCTCCAAACAGGATGTACCCT...GTCATTTTCATGTGGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CCA 90 bp | AATTGTATGGGTAGTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCCGGGTGTTGGTGGTGTaGACTCTTGGCCATCAGACA | + |
Preference number: 4 (lower is better) Translates to: NCMGSSCPASSARLRAQARVLVV*TLGHQT Trigger: TGTCTGATGGCCAAGAGTCCACACCACCAACACCCG...GGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTACTACCCATACAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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3UTR CAA 72 bp | ATAGCCTGTCACAGTTGCCACAGCATAAAAGTCACCTaGGTCAAGGACAGGCACGTGAGGGCTCATCAGGGT | + |
Preference number: 4 (lower is better) Translates to: IACHSCHSIKVT*VKDRHVRAHQG Trigger: ACCCTGATGAGCCCTCACGTGCCTGTCCTTGACCAAGGTGACTTTTATGCTGTGGCAACTGTGACAGGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR TCA 90 bp | TATCTCACAGGTCCAGCCTGTCAAGATCATGTCAATACTAGATTTTGGTCGGTACGTTCTCTTGCGGGGTaGGCAGCAGGGAGCCCACGT | + |
Preference number: 4 (lower is better) Translates to: YLTGPACQDHVNTRFWSVRSLAG*AAGSPR Trigger: ACGTGGGCTCCCTGCTGCTCACCCCGCAAGAGAACG...TACCGACCAAAATCTAGTATTGACATGATCTTGACAGGCTGGACCTGTGAGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CCA 90 bp | CTTTACTCAGAGTGGATTAGCCTTCATGCCTGGATGAACCCCATAGCTCCTGGACCACAATTCCTGAAGTaGGTGCGGGTGTTGGTGGTG | + |
Preference number: 4 (lower is better) Translates to: LYSEWISLHAWMNPIAPGPQFLK*VRVLVV Trigger: CACCACCAACACCCGCACCCACTTCAGGAATTGTGG...TCCAGGAGCTATGGGGTTCATCCAGGCATGAAGGCTAATCCACTCTGAGTAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR TCA 90 bp | TGCAATACTTTAACTGTTTCACAACAAACACTAGCCATTGACTCTATGCATATGGGGAGCCCACGTTGGTaGCCCTCCGCGGGGGCTGCT | + |
Preference number: 4 (lower is better) Translates to: CNTLTVSQQTLAIDSMHMGSPRW*PSAGAA Trigger: AGCAGCCCCCGCGGAGGGTCACCAACGTGGGCTCCC...CATATGCATAGAGTCAATGGCTAGTGTTTGTTGTGAAACAGTTAAAGTATTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041737.8 |
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CDS-3UTR TCA 90 bp | AATATTCACAAATCACGTGAGCATCCTGATGTAAACTTGCACACAGCAACAAGGAAGCGCATCCCTTCCTaGGCAGGACACGGGCCGGCT | + |
Preference number: 4 (lower is better) Translates to: NIHKSREHPDVNLHTATRKRIPS*AGHGPA Trigger: AGCCGGCCCGTGTCCTGCTCAGGAAGGGATGCGCTT...CCTTGTTGCTGTGTGCAAGTTTACATCAGGATGCTCACGTGATTTGTGAATATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CCA 90 bp | TACAGTAACATGCCGAACCCAGTGTGGCCTTGGTGGGGACAGAGTGAGACAGCTTATGTCTCAGCAAAATaGTACAGGCTGGGACCTTCA | + |
Preference number: 4 (lower is better) Translates to: YSNMPNPVWPWWGQSETAYVSAK*YRLGPS Trigger: TGAAGGTCCCAGCCTGTACCATTTTGCTGAGACATA...AGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATGTTACTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041737.8 |
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CDS-3UTR TCA 90 bp | GTAACATGCCGAACCCAGTGTGGCCTTGGTGGGGACAGAGTGAGACAGCTTCTGTCTCCAGCAAAGGTATaGAAATATCCTCTAGGACTA | + |
Preference number: 4 (lower is better) Translates to: VTCRTQCGLGGDRVRQLLSPAKV*KYPLGL Trigger: TAGTCCTAGAGGATATTTTCATACCTTTGCTGGAGA...CAGAAGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041737.8 |
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CDS-3UTR GCA 90 bp | AATTGTATGGGTAGTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCCATACAGTTCCGATCTaGTGCATACAACTGCACCAC | + |
Preference number: 4 (lower is better) Translates to: NCMGSSCPASSARLRAQAHTVPI*CIQLHH Trigger: GTGGTGCAGTTGTATGCAGCAGATCGGAACTGTATG...GGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTACTACCCATACAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CCA 90 bp | TATCTCACAGGTCCAGCCTGTCAAGATCATGTCAATACTAGATTTTGGTCGGTAGGGTGCGGGTGTTGGTaGTGTGGACTCTTGGCCATC | + |
Preference number: 4 (lower is better) Translates to: YLTGPACQDHVNTRFWSVGCGCW*CGLLAI Trigger: GATGGCCAAGAGTCCACACCACCAACACCCGCACCC...TACCGACCAAAATCTAGTATTGACATGATCTTGACAGGCTGGACCTGTGAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CCA 90 bp | TATCTCACAGGTCCAGCCTGTCAAGATCATGTCAATACTAGATTTTGGTCGGTAGGGTGGAGGTGGTGGTaGTGCTTGTCTTCGGAGTTC | + |
Preference number: 4 (lower is better) Translates to: YLTGPACQDHVNTRFWSVGWRWW*CLSSEF Trigger: GAACTCCGAAGACAAGCACCACCACCACCTCCACCC...TACCGACCAAAATCTAGTATTGACATGATCTTGACAGGCTGGACCTGTGAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CCA 90 bp | AATATTCACAAATCACGTGAGCATCCTGATGTAAACTTGCACACAGCAACAAGGTCCTCCTCTCGAGGGTaGAGGTGGTGGTGGTGCTTG | + |
Preference number: 4 (lower is better) Translates to: NIHKSREHPDVNLHTATRSSSRG*RWWWCL Trigger: CAAGCACCACCACCACCTCCACCCTCGAGAGGAGGA...CCTTGTTGCTGTGTGCAAGTTTACATCAGGATGCTCACGTGATTTGTGAATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CCA 90 bp | AATATTCACAAATCACGTGAGCATCCTGATGTAAACTTGCACACAGCAACAAGGAGAGGGCAGCGCTGGTaGTGGAGGAGGGTACATCCT | + |
Preference number: 4 (lower is better) Translates to: NIHKSREHPDVNLHTATRRGQRW*WRRVHP Trigger: AGGATGTACCCTCCTCCACCACCAGCGCTGCCCTCT...CCTTGTTGCTGTGTGCAAGTTTACATCAGGATGCTCACGTGATTTGTGAATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CCA 90 bp | CTTTACTCAGAGTGGATTAGCCTTCATGCCTGGATGAACCCCATAGCTCCTGGAATGCCCTGTCGTATCTaGTCTAAAAGCGCATCCCTT | + |
Preference number: 4 (lower is better) Translates to: LYSEWISLHAWMNPIAPGMPCRI*SKSASL Trigger: AAGGGATGCGCTTTTAGACCAGATACGACAGGGCAT...TCCAGGAGCTATGGGGTTCATCCAGGCATGAAGGCTAATCCACTCTGAGTAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CCA 90 bp | GGTAATTATCACGGTAAATATCAAACAGCCACCTTTAGGCGGATTAGTGTACTGAGTGGGTGCGGGTGTTaGTGGTGTGGACTCTTGGCC | + |
Preference number: 4 (lower is better) Translates to: GNYHGKYQTATFRRISVLSGCGC*WCGLLA Trigger: GGCCAAGAGTCCACACCACCAACACCCGCACCCACT...CAGTACACTAATCCGCCTAAAGGTGGCTGTTTGATATTTACCGTGATAATTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CCA 90 bp | ACTGTAAAGAGGCAAGGAAACCCTAATTGTAACATACCATGTAGTATGCGTAACCGAGGGTGGAGGTGGTaGTGGTGCTTGTCTTCGGAG | + |
Preference number: 4 (lower is better) Translates to: TVKRQGNPNCNIPCSMRNRGWRW*WCLSSE Trigger: CTCCGAAGACAAGCACCACCACCACCTCCACCCTCG...GTTACGCATACTACATGGTATGTTACAATTAGGGTTTCCTTGCCTCTTTACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CCA 90 bp | GTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCACATGAAAATGACCATCTGAGGAATGAATaGCTTTGCTCCTTTTCTGCA | + |
Preference number: 4 (lower is better) Translates to: VVVQPHPHVSELKPHENDHLRNE*LCSFSA Trigger: TGCAGAAAAGGAGCAAAGCCATTCATTCCTCAGATG...GTCATTTTCATGTGGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR TCA 90 bp | CTTTACTCAGAGTGGATTAGCCTTCATGCCTGGATGAACCCCATAGCTCCTGGAGTCTTCATCTTCATCTaGGGAATGAATGGCTTTGCT | + |
Preference number: 4 (lower is better) Translates to: LYSEWISLHAWMNPIAPGVFIFI*GMNGFA Trigger: AGCAAAGCCATTCATTCCTCAGATGAAGATGAAGAC...TCCAGGAGCTATGGGGTTCATCCAGGCATGAAGGCTAATCCACTCTGAGTAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR GCA 90 bp | AATTGTATGGGTAGTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCAGGAATGAATGGCTTTaGTCCTTTTCTGCATCACTT | + |
Preference number: 4 (lower is better) Translates to: NCMGSSCPASSARLRAQARNEWL*SFSASL Trigger: AAGTGATGCAGAAAAGGAGCAAAGCCATTCATTCCT...GGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTACTACCCATACAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR TCA 90 bp | CTTTACTCAGAGTGGATTAGCCTTCATGCCTGGATGAACCCCATAGCTCCTGGATGTGGGAGATGTTGTTaGCTTGTGAACCATAAAATC | + |
Preference number: 4 (lower is better) Translates to: LYSEWISLHAWMNPIAPGCGRCC*LVNHKI Trigger: GATTTTATGGTTCACAAGTCAACAACATCTCCCACA...TCCAGGAGCTATGGGGTTCATCCAGGCATGAAGGCTAATCCACTCTGAGTAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR TCA 90 bp | ACATTCTGCATACAACTCAATGTGAGAAAAGTGTGTCTGCACTTAAATCAGATAAGCAGTAGGAGCTCTTaGAGGTGGGGGAGGAGGAGC | + |
Preference number: 4 (lower is better) Translates to: TFCIQLNVRKVCLHLNQISSRSS*RWGRRS Trigger: GCTCCTCCTCCCCCACCTTCAAGAGCTCCTACTGCT...TATCTGATTTAAGTGCAGACACACTTTTCTCACATTGAGTTGTATGCAGAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR TCA 90 bp | AATATTCACAAATCACGTGAGCATCCTGATGTAAACTTGCACACAGCAACAAGGGAAGGAGCTGGAACTTaGTGGTCACCATCAGAAGGC | + |
Preference number: 4 (lower is better) Translates to: NIHKSREHPDVNLHTATREGAGT*WSPSEG Trigger: GCCTTCTGATGGTGACCATCAAGTTCCAGCTCCTTC...CCTTGTTGCTGTGTGCAAGTTTACATCAGGATGCTCACGTGATTTGTGAATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR GCA 90 bp | TATCTCACAGGTCCAGCCTGTCAAGATCATGTCAATACTAGATTTTGGTCGGTAACCACTGCACTTCTTTaGCCACATACAGTTCCGATC | + |
Preference number: 4 (lower is better) Translates to: YLTGPACQDHVNTRFWSVTTALL*PHTVPI Trigger: GATCGGAACTGTATGTGGGCAAAGAAGTGCAGTGGT...TACCGACCAAAATCTAGTATTGACATGATCTTGACAGGCTGGACCTGTGAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR GCA 90 bp | ACAAAATTGAGAATCTTTCCAATGTGCTTCAGTTACTCTTGCAAGGAGGGTAACTGGAGGTGGTGGTGGTaGTTGTCTTCGGAGTTCGTT | + |
Preference number: 4 (lower is better) Translates to: TKLRIFPMCFSYSCKEGNWRWWW*LSSEFV Trigger: AACGAACTCCGAAGACAAGCACCACCACCACCTCCA...GTTACCCTCCTTGCAAGAGTAACTGAAGCACATTGGAAAGATTCTCAATTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CCA 90 bp | AATATTCACAAATCACGTGAGCATCCTGATGTAAACTTGCACACAGCAACAAGGTCTCTGTCTTTAAGCTaGGCCTCAGAGATCCCACAC | + |
Preference number: 4 (lower is better) Translates to: NIHKSREHPDVNLHTATRSLSLS*ASEIPH Trigger: GTGTGGGATCTCTGAGGCCCAGCTTAAAGACAGAGA...CCTTGTTGCTGTGTGCAAGTTTACATCAGGATGCTCACGTGATTTGTGAATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CCA 90 bp | AATATTCACAAATCACGTGAGCATCCTGATGTAAACTTGCACACAGCAACAAGGGGTGGTGTGGACTCTTaGCCATCAGACACAGATTTC | + |
Preference number: 4 (lower is better) Translates to: NIHKSREHPDVNLHTATRGGVDS*PSDTDF Trigger: GAAATCTGTGTCTGATGGCCAAGAGTCCACACCACC...CCTTGTTGCTGTGTGCAAGTTTACATCAGGATGCTCACGTGATTTGTGAATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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3UTR CAA 72 bp | CACACAGCATTTAGATATGAAAGGCCTCATGCTAGTTaGTTAAACGCAAAGGCTACCAGACAAGCACATAGC | + |
Preference number: 4 (lower is better) Translates to: HTAFRYERPHAS*LNAKATRQAHS Trigger: GCTATGTGCTTGTCTGGTAGCCTTTGCGTTTAACAAACTAGCATGAGGCCTTTCATATCTAAATGCTGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR TCA 90 bp | GGTAATTATCACGGTAAATATCAAACAGCCACCTTTAGGCGGATTAGTGTACTGCAACTGCACCACTGCTaGAGACATAGTCACACATTT | + |
Preference number: 4 (lower is better) Translates to: GNYHGKYQTATFRRISVLQLHHC*RHSHTF Trigger: AAATGTGTGACTATGTCTTCAGCAGTGGTGCAGTTG...CAGTACACTAATCCGCCTAAAGGTGGCTGTTTGATATTTACCGTGATAATTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR GCA 90 bp | AATATTCACAAATCACGTGAGCATCCTGATGTAAACTTGCACACAGCAACAAGGTCTGCTGCATACAACTaGACCACTGCTGAAGACATA | + |
Preference number: 4 (lower is better) Translates to: NIHKSREHPDVNLHTATRSAAYN*TTAEDI Trigger: TATGTCTTCAGCAGTGGTGCAGTTGTATGCAGCAGA...CCTTGTTGCTGTGTGCAAGTTTACATCAGGATGCTCACGTGATTTGTGAATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR TCA 90 bp | ACTGTAAAGAGGCAAGGAAACCCTAATTGTAACATACCATGTAGTATGCGTAACGACACAGATTTCAATTaGATGCCCTGTCGTATCTGG | + |
Preference number: 4 (lower is better) Translates to: TVKRQGNPNCNIPCSMRNDTDFN*MPCRIW Trigger: CCAGATACGACAGGGCATTCAATTGAAATCTGTGTC...GTTACGCATACTACATGGTATGTTACAATTAGGGTTTCCTTGCCTCTTTACAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR GCA 90 bp | ACATTCTGCATACAACTCAATGTGAGAAAAGTGTGTCTGCACTTAAATCAGATAACAGTTCCGATCTGCTaGATACAACTGCACCACTGC | + |
Preference number: 4 (lower is better) Translates to: TFCIQLNVRKVCLHLNQITVPIC*IQLHHC Trigger: GCAGTGGTGCAGTTGTATGCAGCAGATCGGAACTGT...TATCTGATTTAAGTGCAGACACACTTTTCTCACATTGAGTTGTATGCAGAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR GCA 90 bp | TATCTCACAGGTCCAGCCTGTCAAGATCATGTCAATACTAGATTTTGGTCGGTACAGATTTCAATTGAATaGCCTGTCGTATCTGGTCTA | + |
Preference number: 4 (lower is better) Translates to: YLTGPACQDHVNTRFWSVQISIE*PVVSGL Trigger: TAGACCAGATACGACAGGGCATTCAATTGAAATCTG...TACCGACCAAAATCTAGTATTGACATGATCTTGACAGGCTGGACCTGTGAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CCA 90 bp | TATCTCACAGGTCCAGCCTGTCAAGATCATGTCAATACTAGATTTTGGTCGGTATTCTTTTCTTTGGTGTaGGAGATGTTGTTGACTTGT | + |
Preference number: 4 (lower is better) Translates to: YLTGPACQDHVNTRFWSVFFSLV*EMLLTC Trigger: ACAAGTCAACAACATCTCCCACACCAAAGAAAAGAA...TACCGACCAAAATCTAGTATTGACATGATCTTGACAGGCTGGACCTGTGAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CCA 90 bp | AATATTCACAAATCACGTGAGCATCCTGATGTAAACTTGCACACAGCAACAAGGGTGCTGGAAATTACTTaGTGTTCCAATATCTGCCTT | + |
Preference number: 4 (lower is better) Translates to: NIHKSREHPDVNLHTATRVLEIT*CSNICL Trigger: AAGGCAGATATTGGAACACCAAGTAATTTCCAGCAC...CCTTGTTGCTGTGTGCAAGTTTACATCAGGATGCTCACGTGATTTGTGAATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR TCA 90 bp | ACTGTAAAGAGGCAAGGAAACCCTAATTGTAACATACCATGTAGTATGCGTAACTCTCCAGCAAAGGTATaGAAATATCCTCTAGGACTA | + |
Preference number: 4 (lower is better) Translates to: TVKRQGNPNCNIPCSMRNSPAKV*KYPLGL Trigger: TAGTCCTAGAGGATATTTTCATACCTTTGCTGGAGA...GTTACGCATACTACATGGTATGTTACAATTAGGGTTTCCTTGCCTCTTTACAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR TCA 90 bp | ACATTCTGCATACAACTCAATGTGAGAAAAGTGTGTCTGCACTTAAATCAGATAGCACCCTCTCTAATTTaGTCCAAAAGAGCTGCTTTG | + |
Preference number: 4 (lower is better) Translates to: TFCIQLNVRKVCLHLNQIAPSLI*SKRAAL Trigger: CAAAGCAGCTCTTTTGGATCAAATTAGAGAGGGTGC...TATCTGATTTAAGTGCAGACACACTTTTCTCACATTGAGTTGTATGCAGAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR GCA 90 bp | TGCAATACTTTAACTGTTTCACAACAAACACTAGCCATTGACTCTATGCATATGTCTGCTGCATACAACTaGACCACTGCTGAAGACATA | + |
Preference number: 4 (lower is better) Translates to: CNTLTVSQQTLAIDSMHMSAAYN*TTAEDI Trigger: TATGTCTTCAGCAGTGGTGCAGTTGTATGCAGCAGA...CATATGCATAGAGTCAATGGCTAGTGTTTGTTGTGAAACAGTTAAAGTATTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041737.8 |
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CDS-3UTR CCA 90 bp | ACATTCTGCATACAACTCAATGTGAGAAAAGTGTGTCTGCACTTAAATCAGATAATCAAAACCTGTATTTaGATCCCATCCAACATGCCC | + |
Preference number: 4 (lower is better) Translates to: TFCIQLNVRKVCLHLNQIIKTCI*IPSNMP Trigger: GGGCATGTTGGATGGGATCCAAATACAGGTTTTGAT...TATCTGATTTAAGTGCAGACACACTTTTCTCACATTGAGTTGTATGCAGAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CAA 90 bp | GTAACATGCCGAACCCAGTGTGGCCTTGGTGGGGACAGAGTGAGACAGCTTCTGAGCAGGGAGCCCACGTaGGTGACCCTCCGCGGGGGC | + |
Preference number: 5 (lower is better) Translates to: VTCRTQCGLGGDRVRQLLSREPT*VTLRGG Trigger: GCCCCCGCGGAGGGTCACCAACGTGGGCTCCCTGCT...CAGAAGCTGTCTCACTCTGTCCCCACCAAGGCCACACTGGGTTCGGCATGTTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041737.8 |
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CDS GCA 90 bp | GTCACACATTTCTTGCCGAGGAAGGAGAAGAGAGACTCGTTCTCTTaGGGGGTGAGCAGCAGGGAGCCCACGTTGGTGACCCTCCGCGGG | + |
Preference number: 5 (lower is better) Translates to: VTHFLPRKEKRDSFS*GVSSREPTLVTLRG Trigger: CCCGCGGAGGGTCACCAACGTGGGCTCCCTGCTGCTCACCCCGCAAGAGAACGAGTCTCTCTTCTCCTTCCTCGGCAAGAAATGTGTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031695.15 ENSMUST00000041737.8 |
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CDS GCA 90 bp | AGGAGGAGGGGGAGGTCCTCCTCTCGAGGGTGGAGGTGGTGGTGGTaGTTGTCTTCGGAGTTCGTTTTTAACAGCTTCTACACCTCCTGT | + |
Preference number: 5 (lower is better) Translates to: RRRGRSSSRGWRWWW*LSSEFVFNSFYTSC Trigger: ACAGGAGGTGTAGAAGCTGTTAAAAACGAACTCCGAAGACAAGCACCACCACCACCTCCACCCTCGAGAGGAGGACCTCCCCCTCCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CAA 90 bp | TATCTCACAGGTCCAGCCTGTCAAGATCATGTCAATACTAGATTTTGGTCGGTAAGCAGGGAGCCCACGTaGGTGACCCTCCGCGGGGGC | + |
Preference number: 5 (lower is better) Translates to: YLTGPACQDHVNTRFWSVSREPT*VTLRGG Trigger: GCCCCCGCGGAGGGTCACCAACGTGGGCTCCCTGCT...TACCGACCAAAATCTAGTATTGACATGATCTTGACAGGCTGGACCTGTGAGATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CAA 90 bp | GTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCACATGAAAATGACGAGAGACTCGTTCTCTaGCGGGGTGAGCAGCAGGGA | + |
Preference number: 5 (lower is better) Translates to: VVVQPHPHVSELKPHENDERLVL*RGEQQG Trigger: TCCCTGCTGCTCACCCCGCAAGAGAACGAGTCTCTC...GTCATTTTCATGTGGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS CCA 90 bp | TCAGCGCACCCACAATTCCTGAAGTGGGTGCGGGTGTTGGTGGTGTaGACTCTTGGCCATCAGACACAGATTTCAATTGAATGCCCTGTC | + |
Preference number: 5 (lower is better) Translates to: SAHPQFLKWVRVLVV*TLGHQTQISIECPV Trigger: GACAGGGCATTCAATTGAAATCTGTGTCTGATGGCCAAGAGTCCACACCACCAACACCCGCACCCACTTCAGGAATTGTGGGTGCGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS GCA 90 bp | CTGAGGATTGTCCTTAACCAGACAAGCGACACCACTGCACTTCTTTaGCCACATACAGTTCCGATCTGCTGCATACAACTGCACCACTGC | + |
Preference number: 5 (lower is better) Translates to: LRIVLNQTSDTTALL*PHTVPICCIQLHHC Trigger: GCAGTGGTGCAGTTGTATGCAGCAGATCGGAACTGTATGTGGGCAAAGAAGTGCAGTGGTGTCGCTTGTCTGGTTAAGGACAATCCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031695.15 ENSMUST00000041737.8 |
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CDS-3UTR CAA 90 bp | GTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCACATGAAAATGACAGGTGGTGGTGGTGCTaGTCTTCGGAGTTCGTTTTT | + |
Preference number: 5 (lower is better) Translates to: VVVQPHPHVSELKPHENDRWWWC*SSEFVF Trigger: AAAAACGAACTCCGAAGACAAGCACCACCACCACCT...GTCATTTTCATGTGGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CAA 90 bp | GTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCACATGAAAATGACTGGTGGTGTGGACTCTaGGCCATCAGACACAGATTT | + |
Preference number: 5 (lower is better) Translates to: VVVQPHPHVSELKPHENDWWCGL*AIRHRF Trigger: AAATCTGTGTCTGATGGCCAAGAGTCCACACCACCA...GTCATTTTCATGTGGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CAA 90 bp | AATTGTATGGGTAGTAGTTGTCCAGCCTCATCCGCACGTCTCAGAGCTCAAGCCTTTTTCAGATTTCCTTaGTCGTCGGCCCAACAGGTC | + |
Preference number: 5 (lower is better) Translates to: NCMGSSCPASSARLRAQAFFRFP*SSAQQV Trigger: GACCTGTTGGGCCGACGACAAAGGAAATCTGAAAAA...GGCTTGAGCTCTGAGACGTGCGGATGAGGCTGGACAACTACTACCCATACAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS GCA 90 bp | CTGCACTTCTTTGCCCACATACAGTTCCGATCTGCTGCATACAACTaGACCACTGCTGAAGACATAGTCACACATTTCTTGCCGAGGAAG | + |
Preference number: 5 (lower is better) Translates to: LHFFAHIQFRSAAYN*TTAEDIVTHFLPRK Trigger: CTTCCTCGGCAAGAAATGTGTGACTATGTCTTCAGCAGTGGTGCAGTTGTATGCAGCAGATCGGAACTGTATGTGGGCAAAGAAGTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031695.15 ENSMUST00000041737.8 |
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CDS-3UTR CAA 90 bp | CTTTACTCAGAGTGGATTAGCCTTCATGCCTGGATGAACCCCATAGCTCCTGGAAGCACCCTCTCTAATTaGATCCAAAAGAGCTGCTTT | + |
Preference number: 5 (lower is better) Translates to: LYSEWISLHAWMNPIAPGSTLSN*IQKSCF Trigger: AAAGCAGCTCTTTTGGATCAAATTAGAGAGGGTGCT...TCCAGGAGCTATGGGGTTCATCCAGGCATGAAGGCTAATCCACTCTGAGTAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CAA 90 bp | TGCAATACTTTAACTGTTTCACAACAAACACTAGCCATTGACTCTATGCATATGGAGAGACTCGTTCTCTaGCGGGGTGAGCAGCAGGGA | + |
Preference number: 5 (lower is better) Translates to: CNTLTVSQQTLAIDSMHMERLVL*RGEQQG Trigger: TCCCTGCTGCTCACCCCGCAAGAGAACGAGTCTCTC...CATATGCATAGAGTCAATGGCTAGTGTTTGTTGTGAAACAGTTAAAGTATTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041737.8 |
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CDS-3UTR CAA 90 bp | AATATTCACAAATCACGTGAGCATCCTGATGTAAACTTGCACACAGCAACAAGGATAGTCACACATTTCTaGCCGAGGAAGGAGAAGAGA | + |
Preference number: 5 (lower is better) Translates to: NIHKSREHPDVNLHTATRIVTHF*PRKEKR Trigger: TCTCTTCTCCTTCCTCGGCAAGAAATGTGTGACTAT...CCTTGTTGCTGTGTGCAAGTTTACATCAGGATGCTCACGTGATTTGTGAATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CAA 90 bp | GGTAATTATCACGGTAAATATCAAACAGCCACCTTTAGGCGGATTAGTGTACTGGATCAAAACCTGTATTaGGATCCCATCCAACATGCC | + |
Preference number: 5 (lower is better) Translates to: GNYHGKYQTATFRRISVLDQNLY*DPIQHA Trigger: GGCATGTTGGATGGGATCCAAATACAGGTTTTGATC...CAGTACACTAATCCGCCTAAAGGTGGCTGTTTGATATTTACCGTGATAATTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CAA 90 bp | TATCTCACAGGTCCAGCCTGTCAAGATCATGTCAATACTAGATTTTGGTCGGTAAGACACAGATTTCAATaGAATGCCCTGTCGTATCTG | + |
Preference number: 5 (lower is better) Translates to: YLTGPACQDHVNTRFWSVRHRFQ*NALSYL Trigger: CAGATACGACAGGGCATTCAATTGAAATCTGTGTCT...TACCGACCAAAATCTAGTATTGACATGATCTTGACAGGCTGGACCTGTGAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS-3UTR CAA 90 bp | ACAAAATTGAGAATCTTTCCAATGTGCTTCAGTTACTCTTGCAAGGAGGGTAACCCTTTCTTCTTTTCTTaGGTGTGGGAGATGTTGTTG | + |
Preference number: 5 (lower is better) Translates to: TKLRIFPMCFSYSCKEGNPFFFS*VWEMLL Trigger: CAACAACATCTCCCACACCAAAGAAAAGAAGAAAGG...GTTACCCTCCTTGCAAGAGTAACTGAAGCACATTGGAAAGATTCTCAATTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS CAA 72 bp | TCGTTCTCTTGCGGGGTGAGCAGCAGGGAGCCCACGTaGGTGACCCTCCGCGGGGGCTGCTGGCCCGAGCTC | + |
Preference number: 6 (lower is better) Translates to: SFSCGVSSREPT*VTLRGGCWPEL Trigger: GAGCTCGGGCCAGCAGCCCCCGCGGAGGGTCACCAACGTGGGCTCCCTGCTGCTCACCCCGCAAGAGAACGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031695.15 ENSMUST00000041737.8 |
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CDS CCA 72 bp | AGGGGGAGGAGGAGGGGGAGGTCCTCCTCTCGAGGGTaGAGGTGGTGGTGGTGCTTGTCTTCGGAGTTCGTT | + |
Preference number: 6 (lower is better) Translates to: RGRRRGRSSSRG*RWWWCLSSEFV Trigger: AACGAACTCCGAAGACAAGCACCACCACCACCTCCACCCTCGAGAGGAGGACCTCCCCCTCCTCCTCCCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS CCA 72 bp | GGGCAGCGCTGGTGGTGGAGGAGGGTACATCCTGTTTaGAGGGGGCGGAGGAACAACAACACCAGGCCTAGA | + |
Preference number: 6 (lower is better) Translates to: GQRWWWRRVHPV*RGRRNNNTRPR Trigger: TCTAGGCCTGGTGTTGTTGTTCCTCCGCCCCCTCCAAACAGGATGTACCCTCCTCCACCACCAGCGCTGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS CAA 90 bp | AGTCACACATTTCTTGCCGAGGAAGGAGAAGAGAGACTCGTTCTCTaGCGGGGTGAGCAGCAGGGAGCCCACGTTGGTGACCCTCCGCGG | + |
Preference number: 6 (lower is better) Translates to: SHTFLAEEGEERLVL*RGEQQGAHVGDPPR Trigger: CCGCGGAGGGTCACCAACGTGGGCTCCCTGCTGCTCACCCCGCAAGAGAACGAGTCTCTCTTCTCCTTCCTCGGCAAGAAATGTGTGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031695.15 ENSMUST00000041737.8 |
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CDS CCA 72 bp | AGGAGGGGGAGGTCCTCCTCTCGAGGGTGGAGGTGGTaGTGGTGCTTGTCTTCGGAGTTCGTTTTTAACAGC | + |
Preference number: 6 (lower is better) Translates to: RRGRSSSRGWRW*WCLSSEFVFNS Trigger: GCTGTTAAAAACGAACTCCGAAGACAAGCACCACCACCACCTCCACCCTCGAGAGGAGGACCTCCCCCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS CCA 72 bp | AGGAGGAGGGGGAGGTCCTCCTCTCGAGGGTGGAGGTaGTGGTGGTGCTTGTCTTCGGAGTTCGTTTTTAAC | + |
Preference number: 6 (lower is better) Translates to: RRRGRSSSRGWR*WWCLSSEFVFN Trigger: GTTAAAAACGAACTCCGAAGACAAGCACCACCACCACCTCCACCCTCGAGAGGAGGACCTCCCCCTCCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS GCA 72 bp | GTCCTTAACCAGACAAGCGACACCACTGCACTTCTTTaGCCACATACAGTTCCGATCTGCTGCATACAACTG | + |
Preference number: 6 (lower is better) Translates to: VLNQTSDTTALL*PHTVPICCIQL Trigger: CAGTTGTATGCAGCAGATCGGAACTGTATGTGGGCAAAGAAGTGCAGTGGTGTCGCTTGTCTGGTTAAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031695.15 ENSMUST00000041737.8 |
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CDS CCA 72 bp | CCACAATTCCTGAAGTGGGTGCGGGTGTTGGTGGTGTaGACTCTTGGCCATCAGACACAGATTTCAATTGAA | + |
Preference number: 6 (lower is better) Translates to: PQFLKWVRVLVV*TLGHQTQISIE Trigger: TTCAATTGAAATCTGTGTCTGATGGCCAAGAGTCCACACCACCAACACCCGCACCCACTTCAGGAATTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS TCA 72 bp | ACAGTTCCGATCTGCTGCATACAACTGCACCACTGCTaGAGACATAGTCACACATTTCTTGCCGAGGAAGGA | + |
Preference number: 6 (lower is better) Translates to: TVPICCIQLHHC*RHSHTFLAEEG Trigger: TCCTTCCTCGGCAAGAAATGTGTGACTATGTCTTCAGCAGTGGTGCAGTTGTATGCAGCAGATCGGAACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031695.15 ENSMUST00000041737.8 |
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CDS TCA 72 bp | GGTGTGGACTCTTGGCCATCAGACACAGATTTCAATTaGATGCCCTGTCGTATCTGGTCTAAAAGCGCATCC | + |
Preference number: 6 (lower is better) Translates to: GVDSWPSDTDFN*MPCRIWSKSAS Trigger: GGATGCGCTTTTAGACCAGATACGACAGGGCATTCAATTGAAATCTGTGTCTGATGGCCAAGAGTCCACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS GCA 72 bp | TGGACTCTTGGCCATCAGACACAGATTTCAATTGAATaGCCTGTCGTATCTGGTCTAAAAGCGCATCCCTTC | + |
Preference number: 6 (lower is better) Translates to: WTLGHQTQISIE*PVVSGLKAHPF Trigger: GAAGGGATGCGCTTTTAGACCAGATACGACAGGGCATTCAATTGAAATCTGTGTCTGATGGCCAAGAGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |
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CDS GCA 72 bp | TTTGCCCACATACAGTTCCGATCTGCTGCATACAACTaGACCACTGCTGAAGACATAGTCACACATTTCTTG | + |
Preference number: 6 (lower is better) Translates to: FAHIQFRSAAYN*TTAEDIVTHFL Trigger: CAAGAAATGTGTGACTATGTCTTCAGCAGTGGTGCAGTTGTATGCAGCAGATCGGAACTGTATGTGGGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031695.15 ENSMUST00000041737.8 |
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CDS TCA 72 bp | CTTCTTTTCTTTGGTGTGGGAGATGTTGTTGACTTGTaGACCATAAAATCTATTTGTTGTGATTTCTGGATT | + |
Preference number: 6 (lower is better) Translates to: LLFFGVGDVVDL*TIKSICCDFWI Trigger: AATCCAGAAATCACAACAAATAGATTTTATGGTTCACAAGTCAACAACATCTCCCACACCAAAGAAAAGAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031695.15 |