Pregenerated sensors for WASHC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034560Ensembl transcript IDs: ENSMUST00000038388.7, ENSMUST00000217842.2
Found 216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGGCGATGGGTTAGGGATCTGGACTTGCCCTTCGCCAGCTTCATaGCAGTTTCACAGGGGCGCCTTCAGCCTACACTCCAAAGATCCA | + |
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Preference number: 1 (lower is better) Translates to: GGDGLGIWTCPSPAS*QFHRGAFSLHSKDP Trigger: TGGATCTTTGGAGTGTAGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCCTAACCCATCGCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
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| 3UTR CCA 90 bp | AAACACACACAGAGTACAGGGAAGGGAGGCGATGGGTTAGGGATCTaGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCC | + |
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Preference number: 1 (lower is better) Translates to: KHTQSTGKGGDGLGI*TCPSPASWQFHRGA Trigger: GGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCCTAACCCATCGCCTCCCTTCCCTGTACTCTGTGTGTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
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| 3UTR CCA 90 bp | GCGTCAGATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: ASDLVTDGCEPPCGC*DLNSGPSEEQSGAL Trigger: AAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGATCTGACGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| 3UTR TCA 90 bp | ATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACT | + |
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Preference number: 1 (lower is better) Translates to: ILLQMVVSHHVVAGI*TLDLRKSSRVLLPT Trigger: AGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| 3UTR CCA 90 bp | GACTCCAGAGCCAGAGCAGTCCGTACAGTCTCCTTAGGTGTGACCTaGGAAATGACAACTTATCAAGCACGCCATAGCATCCATGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: DSRARAVRTVSLGVT*EMTTYQARHSIHVS Trigger: AGAGACATGGATGCTATGGCGTGCTTGATAAGTTGTCATTTCCCAGGTCACACCTAAGGAGACTGTACGGACTGCTCTGGCTCTGGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
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| 3UTR CCA 90 bp | ACAGACAAATTACAAACACACACAGAGTACAGGGAAGGGAGGCGATaGGTTAGGGATCTGGACTTGCCCTTCGCCAGCTTCATGGCAGTT | + |
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Preference number: 1 (lower is better) Translates to: TDKLQTHTEYREGRR*VRDLDLPFASFMAV Trigger: AACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCCTAACCCATCGCCTCCCTTCCCTGTACTCTGTGTGTGTTTGTAATTTGTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
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| 3UTR TCA 90 bp | TCTTTCCTGCCAACTTTGAAGGGGTTCCGGTCATCCAGCTTCAAGTaGGTATGCACAGAAAGCCGCAAGTCCTTCTCGATCTCCTTACAC | + |
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Preference number: 1 (lower is better) Translates to: SFLPTLKGFRSSSFK*VCTESRKSFSISLH Trigger: GTGTAAGGAGATCGAGAAGGACTTGCGGCTTTCTGTGCATACTCACTTGAAGCTGGATGACCGGAACCCCTTCAAAGTTGGCAGGAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR GCA 90 bp | TTCCAGGACATCGAGTCCCTGCTCCAAAGTCTGGCTAGGAAGATGTaGCTCTGTCATAACCAAACCATAACGCTGCGTAGCCAGATTTCT | + |
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Preference number: 1 (lower is better) Translates to: FQDIESLLQSLARKM*LCHNQTITLRSQIS Trigger: AGAAATCTGGCTACGCAGCGTTATGGTTTGGTTATGACAGAGGCACATCTTCCTAGCCAGACTTTGGAGCAGGGACTCGATGTCCTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR GCA 90 bp | CATGATACGTCTGACGACTGCACACCATCATTTCACCACGGGATCTaGAGACACAGTGCTCTCGGGTCCATCTCCATTGCTTGTTTTAGT | + |
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Preference number: 1 (lower is better) Translates to: HDTSDDCTPSFHHGI*RHSALGSISIACFS Trigger: ACTAAAACAAGCAATGGAGATGGACCCGAGAGCACTGTGTCTGCAGATCCCGTGGTGAAATGATGGTGTGCAGTCGTCAGACGTATCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR GCA 90 bp | ATAGCATCCATGTCTCTGGAAAAGCATCATGATACGTCTGACGACTaGACACCATCATTTCACCACGGGATCTGCAGACACAGTGCTCTC | + |
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Preference number: 1 (lower is better) Translates to: IASMSLEKHHDTSDD*TPSFHHGICRHSAL Trigger: GAGAGCACTGTGTCTGCAGATCCCGTGGTGAAATGATGGTGTGCAGTCGTCAGACGTATCATGATGCTTTTCCAGAGACATGGATGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR TCA 90 bp | ATATTCTGTACCTTCAGCAGAGTTCCGTGTATGATCACTGAGGACTaGGTCCAAATGCCTGGCTGCTCTAAGTGTTTCTTCTGCAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: IFCTFSRVPCMITED*VQMPGCSKCFFCKP Trigger: GGGCTTGCAGAAGAAACACTTAGAGCAGCCAGGCATTTGGACTCAGTCCTCAGTGATCATACACGGAACTCTGCTGAAGGTACAGAATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR CCA 90 bp | CTGGCTGATGAGCTGCCTGAACTGGTCAAGGTAGCTCTGTCCCTCTaGTGTGATTCCAAGTTTTCTTATGCCACGATTGAATTTTTCTGC | + |
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Preference number: 1 (lower is better) Translates to: LADELPELVKVALSL*CDSKFSYATIEFFC Trigger: GCAGAAAAATTCAATCGTGGCATAAGAAAACTTGGAATCACACCAGAGGGACAGAGCTACCTTGACCAGTTCAGGCAGCTCATCAGCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR TCA 90 bp | GTAAACTATTATAAAATGTCTCACCAAAGACATCAGCAGCTCATGTaGGTCACGTGGAATCCAACAACACAGGAAGGATCACCAGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: VNYYKMSHQRHQQLM*VTWNPTTQEGSPAG Trigger: GCCAGCTGGTGATCCTTCCTGTGTTGTTGGATTCCACGTGACTCACATGAGCTGCTGATGTCTTTGGTGAGACATTTTATAATAGTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
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| 3UTR TCA 90 bp | AGAAATAGAACTAAGAGCCTGATGTTGAAGGTGCTGTGTTATATGTaGCACCGAATCCGCCACAACCATGCTTCTCCTGTAGAACATATG | + |
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Preference number: 1 (lower is better) Translates to: RNRTKSLMLKVLCYM*HRIRHNHASPVEHM Trigger: CATATGTTCTACAGGAGAAGCATGGTTGTGGCGGATTCGGTGTCACATATAACACAGCACCTTCAACATCAGGCTCTTAGTTCTATTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR TCA 90 bp | TCTCTTTCTTTTCTTGGTTCTCTTCAGCTGCGGTCTTGTCTGCTCTaGAGAATATTCTTGCACTGCTCAAGGAGAAATACAGCAGCTCAA | + |
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Preference number: 1 (lower is better) Translates to: SLSFLGSLQLRSCLL*RIFLHCSRRNTAAQ Trigger: TTGAGCTGCTGTATTTCTCCTTGAGCAGTGCAAGAATATTCTTCAGAGCAGACAAGACCGCAGCTGAAGAGAACCAAGAAAAGAAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR GCA 90 bp | AAGGCTCACCAAGCTTGGCTTCCACATTTGCAAAAATTGAGCGAATaGTATGTGCAAACTCTTCTGCAAACGTGCTATTTTTCGACACAG | + |
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Preference number: 1 (lower is better) Translates to: KAHQAWLPHLQKLSE*YVQTLLQTCYFSTQ Trigger: CTGTGTCGAAAAATAGCACGTTTGCAGAAGAGTTTGCACATAGCATTCGCTCAATTTTTGCAAATGTGGAAGCCAAGCTTGGTGAGCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR TCA 90 bp | AATGCCTTGAATGCATCATGGCAGGCACACAGTCTCGTAAAGCACTaGACATGTAATGTAATCTGGCTGCATCGACAGCATTTTCATATA | + |
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Preference number: 1 (lower is better) Translates to: NALNASWQAHSLVKH*TCNVIWLHRQHFHI Trigger: TATATGAAAATGCTGTCGATGCAGCCAGATTACATTACATGTTCAGTGCTTTACGAGACTGTGTGCCTGCCATGATGCATTCAAGGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR GCA 90 bp | ACATTGCATCTGTTGGTGAGGTCTTCAGCAAATGTATCCATCCTCTaGTCTTTAGATAACATAGACTCCATCTTCATCATCCATGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: TLHLLVRSSANVSIL*SLDNIDSIFIIHEL Trigger: GAGCTCATGGATGATGAAGATGGAGTCTATGTTATCTAAAGAGCAGAGGATGGATACATTTGCTGAAGACCTCACCAACAGATGCAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR GCA 90 bp | TTTAGTTTCTTCTTCCTTCTCTTTCTTTTCTTGGTTCTCTTCAGCTaGGGTCTTGTCTGCTCTGAAGAATATTCTTGCACTGCTCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: FSFFFLLFLFLVLFS*GLVCSEEYSCTAQG Trigger: TCCTTGAGCAGTGCAAGAATATTCTTCAGAGCAGACAAGACCGCAGCTGAAGAGAACCAAGAAAAGAAAGAGAAGGAAGAAGAAACTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR TCA 90 bp | TGCGTTATTTACTGGCTGTGTACCGCATATGCACTGACTTTCCCATaGCTTGAGATCAACATGAATCAAAGACACAGACAAATTACAAAC | + |
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Preference number: 1 (lower is better) Translates to: CVIYWLCTAYALTFP*LEINMNQRHRQITN Trigger: GTTTGTAATTTGTCTGTGTCTTTGATTCATGTTGATCTCAAGTCATGGGAAAGTCAGTGCATATGCGGTACACAGCCAGTAAATAACGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
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| 3UTR TCA 90 bp | TTCAGCAACCTTTTGTACATAGTCCAGTGGTCTTTCAGCGTGACATaGTTATCAACAATCTCATCCAGGGTAAGTAAAACTGTTAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: FSNLLYIVQWSFSVT*LSTISSRVSKTVSS Trigger: ACTGCTAACAGTTTTACTTACCCTGGATGAGATTGTTGATAATCATGTCACGCTGAAAGACCACTGGACTATGTACAAAAGGTTGCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR TCA 90 bp | AATTTCAGAAGGCTCACCAAGCTTGGCTTCCACATTTGCAAAAATTaGGCGAATGCTATGTGCAAACTCTTCTGCAAACGTGCTATTTTT | + |
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Preference number: 1 (lower is better) Translates to: NFRRLTKLGFHICKN*ANAMCKLFCKRAIF Trigger: AAAAATAGCACGTTTGCAGAAGAGTTTGCACATAGCATTCGCTCAATTTTTGCAAATGTGGAAGCCAAGCTTGGTGAGCCTTCTGAAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR TCA 90 bp | TCTCCTTACACAGCTTATCCAGCAAATGCTCATTTAAAATGTCCATaGTTTCCTTGTCATAGCAATCCAAAAGCAGCTCATGGGACTCTA | + |
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Preference number: 1 (lower is better) Translates to: SPYTAYPANAHLKCP*FPCHSNPKAAHGTL Trigger: TAGAGTCCCATGAGCTGCTTTTGGATTGCTATGACAAGGAAATCATGGACATTTTAAATGAGCATTTGCTGGATAAGCTGTGTAAGGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR TCA 90 bp | TATTTACTGGCTGTGTACCGCATATGCACTGACTTTCCCATGACTTaGGATCAACATGAATCAAAGACACAGACAAATTACAAACACACA | + |
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Preference number: 1 (lower is better) Translates to: YLLAVYRICTDFPMT*DQHESKTQTNYKHT Trigger: TGTGTGTTTGTAATTTGTCTGTGTCTTTGATTCATGTTGATCTCAAGTCATGGGAAAGTCAGTGCATATGCGGTACACAGCCAGTAAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
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| 3UTR TCA 90 bp | TTCTCATTTCACTGTAAGTGGCCCAATCATGAAGAGCTACTGTTGTaGGATTGTAGAAAGTCTTATCCAGATAGTGAGTTACATAAGCTC | + |
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Preference number: 1 (lower is better) Translates to: FSFHCKWPNHEELLL*DCRKSYPDSELHKL Trigger: GAGCTTATGTAACTCACTATCTGGATAAGACTTTCTACAATCTCACAACAGTAGCTCTTCATGATTGGGCCACTTACAGTGAAATGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGATCTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTGGAAGGATCACCAGCTaGCCACGCTGTGCACAGGCA | + |
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Preference number: 2 (lower is better) Translates to: RDLDLPFASFMAVSQGRLGRITS*PRCAQA Trigger: TGCCTGTGCACAGCGTGGCCAGCTGGTGATCCTTCC...AAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
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| 3UTR CAA 90 bp | CACACAGAGTACAGGGAAGGGAGGCGATGGGTTAGGGATCTGGACTaGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: HTEYREGRRWVRDLD*PFASFMAVSQGRLQ Trigger: CTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCCTAACCCATCGCCTCCCTTCCCTGTACTCTGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
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| 3UTR-3UTR TCA 90 bp | TGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTATTGCTTCTCGGCCCTTaGAAGCTGGAGCATCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: WTCPSPASWQFHRGAFSLLLLGP*KLEHQK Trigger: TTTCTGATGCTCCAGCTTTCAAGGGCCGAGAAGCAA...TAGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
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| 3UTR CAA 90 bp | GATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCAC | + |
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Preference number: 2 (lower is better) Translates to: DLVTDGCEPPCGCWD*NSGPSEEQSGALTH Trigger: GTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| 3UTR-3UTR GCA 90 bp | CACAGAGTGCCTTCAAACCTAGTGAAATGTCAAGTGGGTCCCGTCTATGGCTTACAGCTGGCCACGCTGTaGACAGGCAGTAACAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: HRVPSNLVKCQVGPVYGLQLATL*TGSNSL Trigger: CAGACTGTTACTGCCTGTGCACAGCGTGGCCAGCTG...TAAGCCATAGACGGGACCCACTTGACATTTCACTAGGTTTGAAGGCACTCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
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| 3UTR-3UTR CCA 90 bp | GACACAGTGCTCTCGGGTCCATCTCCATTGCTTGTTTTAGTTTCTTCTTCCTTCGGAAGGATCACCAGCTaGCCACGCTGTGCACAGGCA | + |
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Preference number: 2 (lower is better) Translates to: DTVLSGPSPLLVLVSSSFGRITS*PRCAQA Trigger: TGCCTGTGCACAGCGTGGCCAGCTGGTGATCCTTCC...GAAGGAAGAAGAAACTAAAACAAGCAATGGAGATGGACCCGAGAGCACTGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGAGTATTTAGCTTGGGCTaGGACAGTTGCCCTGACCGC | + |
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Preference number: 2 (lower is better) Translates to: LVTDGCEPPCGCWDLNSGVFSLG*DSCPDR Trigger: GCGGTCAGGGCAACTGTCTCAGCCCAAGCTAAATAC...TCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| 3UTR-3UTR TCA 90 bp | CACCACGGGATCTGCAGACACAGTGCTCTCGGGTCCATCTCCATTGCTTGTTTTCGGTCTTGTCTGCTCTaGAGAATATTCTTGCACTGC | + |
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Preference number: 2 (lower is better) Translates to: HHGICRHSALGSISIACFRSCLL*RIFLHC Trigger: GCAGTGCAAGAATATTCTTCAGAGCAGACAAGACCG...AAAACAAGCAATGGAGATGGACCCGAGAGCACTGTGTCTGCAGATCCCGTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGATCTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTGTTTCATTCTCACAGTaGTATATTTCTGAACACCTG | + |
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Preference number: 2 (lower is better) Translates to: RDLDLPFASFMAVSQGRLVSFSQ*YISEHL Trigger: CAGGTGTTCAGAAATATACCACTGTGAGAATGAAAC...AAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
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| 3UTR-3UTR TCA 90 bp | CACCACGGGATCTGCAGACACAGTGCTCTCGGGTCCATCTCCATTGCTTGTTTTTCTTTCAGCGTGACATaGTTATCAACAATCTCATCC | + |
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Preference number: 2 (lower is better) Translates to: HHGICRHSALGSISIACFSFSVT*LSTISS Trigger: GGATGAGATTGTTGATAATCATGTCACGCTGAAAGA...AAAACAAGCAATGGAGATGGACCCGAGAGCACTGTGTCTGCAGATCCCGTGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR-3UTR CCA 90 bp | CACCACGGGATCTGCAGACACAGTGCTCTCGGGTCCATCTCCATTGCTTGTTTTGAGATGTATATTCTTTaGCCTTCGAAATTCTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: HHGICRHSALGSISIACFEMYIL*PSKFWS Trigger: GCTCCAGAATTTCGAAGGCCAAAGAATATACATCTC...AAAACAAGCAATGGAGATGGACCCGAGAGCACTGTGTCTGCAGATCCCGTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTCTCCTGTAGAACATATGCTCTATTGCCTTGAGAAGTTCAATGAGCCTGCATTGCTTCTCGGCCCTTaGAAGCTGGAGCATCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: ASPVEHMLYCLEKFNEPALLLGP*KLEHQK Trigger: TTTCTGATGCTCCAGCTTTCAAGGGCCGAGAAGCAA...TGCAGGCTCATTGAACTTCTCAAGGCAATAGAGCATATGTTCTACAGGAGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR-3UTR GCA 90 bp | CATCGACAGCATTTTCATATACATCATCTAAATAAATCGGGAAGACAGCGCGATCAGCTGGCCACGCTGTaGACAGGCAGTAACAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: HRQHFHIHHLNKSGRQRDQLATL*TGSNSL Trigger: CAGACTGTTACTGCCTGTGCACAGCGTGGCCAGCTG...ATCGCGCTGTCTTCCCGATTTATTTAGATGATGTATATGAAAATGCTGTCGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCTTTATTATACGTATTGTATTCTATTTGAGCCAAGGGAAAGGAGAACCCCACCTTCGCCAGCTTCATaGCAGTTTCACAGGGGCGCC | + |
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Preference number: 2 (lower is better) Translates to: MLYYTYCILFEPRERRTPPSPAS*QFHRGA Trigger: GGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGG...TGGGGTTCTCCTTTCCCTTGGCTCAAATAGAATACAATACGTATAATAAAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGCCAAAACAAGAGCAGATAGCACATCAAGACGCTGTTCACTATATTTTTCCTTCGCCAGCTTCATaGCAGTTTCACAGGGGCGCC | + |
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Preference number: 2 (lower is better) Translates to: FQPKQEQIAHQDAVHYIFPSPAS*QFHRGA Trigger: GGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGG...AAAAATATAGTGAACAGCGTCTTGATGTGCTATCTGCTCTTGTTTTGGCTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR CAA 90 bp | TTCACCACGGGATCTGCAGACACAGTGCTCTCGGGTCCATCTCCATaGCTTGTTTTAGTTTCTTCTTCCTTCTCTTTCTTTTCTTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: FTTGSADTVLSGPSP*LVLVSSSFSFFSWF Trigger: GAACCAAGAAAAGAAAGAGAAGGAAGAAGAAACTAAAACAAGCAATGGAGATGGACCCGAGAGCACTGTGTCTGCAGATCCCGTGGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAAGACATCAGCAGCTCATGTGAGTCACGTGGAATCCAACAACACAGGAAGGTGTTCGATACAGGCCTaGAATATCATTCCATCAAGT | + |
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Preference number: 2 (lower is better) Translates to: PKTSAAHVSHVESNNTGRCSIQA*NIIPSS Trigger: ACTTGATGGAATGATATTTCAGGCCTGTATCGAACA...CCTTCCTGTGTTGTTGGATTCCACGTGACTCACATGAGCTGCTGATGTCTTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR-3UTR TCA 90 bp | TGTATTCATGATCCCCGTCCCATGTGTTCGAATCGAATTAGCAATGTGTCGAATGTGCTGTGTTATATGTaGCACCGAATCCGCCACAAC | + |
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Preference number: 2 (lower is better) Translates to: CIHDPRPMCSNRISNVSNVLCYM*HRIRHN Trigger: GTTGTGGCGGATTCGGTGTCACATATAACACAGCAC...ATTCGACACATTGCTAATTCGATTCGAACACATGGGACGGGGATCATGAATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTGGACTCGCTCTCTAAGCTCGCTGATAAGATCCAGCTTCTTCATGACTACTGTCGTCGTTGTTTTGTaGTTGGTCCATTTAAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: AWTRSLSSLIRSSFFMTTVVVVL*LVHLRC Trigger: ACACCTTAAATGGACCAAGCACAAAACAACGACGAC...AGTAGTCATGAAGAAGCTGGATCTTATCAGCGAGCTTAGAGAGCGAGTCCAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR-3UTR TCA 90 bp | TGTATTCATGATCCCCGTCCCATGTGTTCGAATCGAATTAGCAATGTGTCGAATGAAATAAAGTGGACTTaGCTCCAGAGCCAGAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: CIHDPRPMCSNRISNVSNEIKWT*LQSQSS Trigger: ACTGCTCTGGCTCTGGAGTCAAGTCCACTTTATTTC...ATTCGACACATTGCTAATTCGATTCGAACACATGGGACGGGGATCATGAATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAAGACATCAGCAGCTCATGTGAGTCACGTGGAATCCAACAACACAGGAAGGTCAAACTCTTGGTACTaGTCCAAAAGCTTTAAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: PKTSAAHVSHVESNNTGRSNSWY*SKSFKV Trigger: TACCTTAAAGCTTTTGGATCAGTACCAAGAGTTTGA...CCTTCCTGTGTTGTTGGATTCCACGTGACTCACATGAGCTGCTGATGTCTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTTCTCCTGTAGAACATATGCTCTATTGCCTTGAGAAGTTCAATGAGCCTGCATCGGCCCTTGAAAGCTaGAGCATCAGAAATAAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: ASPVEHMLYCLEKFNEPASALES*SIRNKV Trigger: CACTTTATTTCTGATGCTCCAGCTTTCAAGGGCCGA...TGCAGGCTCATTGAACTTCTCAAGGCAATAGAGCATATGTTCTACAGGAGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAAAGACATCAGCAGCTCATGTGAGTCACGTGGAATCCAACAACACAGGAAGGGTTTCATTCTCACAGTaGTATATTTCTGAACACCTG | + |
|
Preference number: 2 (lower is better) Translates to: PKTSAAHVSHVESNNTGRVSFSQ*YISEHL Trigger: CAGGTGTTCAGAAATATACCACTGTGAGAATGAAAC...CCTTCCTGTGTTGTTGGATTCCACGTGACTCACATGAGCTGCTGATGTCTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTCAAGGAGAAATACAGCAGCTCAAATTCCTGTAAATAGACCTCCAGTCGCTGTAGCTCTGTCCCTCTaGTGTGATTCCAAGTTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: CSRRNTAAQIPVNRPPVAVALSL*CDSKFS Trigger: AGAAAACTTGGAATCACACCAGAGGGACAGAGCTAC...AGCGACTGGAGGTCTATTTACAGGAATTTGAGCTGCTGTATTTCTCCTTGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCTCAAGGAGAAATACAGCAGCTCAAATTCCTGTAAATAGACCTCCAGTCGCTCATTGCATCTGTTGGTaGGGTCTTCAGCAAATGTAT | + |
|
Preference number: 2 (lower is better) Translates to: CSRRNTAAQIPVNRPPVAHCICW*GLQQMY Trigger: ATACATTTGCTGAAGACCTCACCAACAGATGCAATG...AGCGACTGGAGGTCTATTTACAGGAATTTGAGCTGCTGTATTTCTCCTTGAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTCAAGGAGAAATACAGCAGCTCAAATTCCTGTAAATAGACCTCCAGTCGCTAAGGCTCACCAAGCTTaGCTTCCACATTTGCAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: CSRRNTAAQIPVNRPPVAKAHQA*LPHLQK Trigger: TTTTTGCAAATGTGGAAGCCAAGCTTGGTGAGCCTT...AGCGACTGGAGGTCTATTTACAGGAATTTGAGCTGCTGTATTTCTCCTTGAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR CCA 90 bp | GACACAGTGCTCTCGGGTCCATCTCCATTGCTTGTTTTAGTTTCTTCTTCCTTCTGGCCTTCGAAATTCTaGAGCAAAAACATCTACAAG | + |
|
Preference number: 2 (lower is better) Translates to: DTVLSGPSPLLVLVSSSFWPSKF*SKNIYK Trigger: CTTGTAGATGTTTTTGCTCCAGAATTTCGAAGGCCA...GAAGGAAGAAGAAACTAAAACAAGCAATGGAGATGGACCCGAGAGCACTGTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR CAA 90 bp | TCTTCTTCCTTCTCTTTCTTTTCTTGGTTCTCTTCAGCTGCGGTCTaGTCTGCTCTGAAGAATATTCTTGCACTGCTCAAGGAGAAATAC | + |
|
Preference number: 2 (lower is better) Translates to: SSSFSFFSWFSSAAV*SALKNILALLKEKY Trigger: GTATTTCTCCTTGAGCAGTGCAAGAATATTCTTCAGAGCAGACAAGACCGCAGCTGAAGAGAACCAAGAAAAGAAAGAGAAGGAAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTCTGATACAGATGCTTCATGACTTTCAGGCTCAACTCTTTTTAACTGCGTTAGAAATAAAGTGGACTTaGCTCCAGAGCCAGAGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: SLIQMLHDFQAQLFLTALEIKWT*LQSQSS Trigger: ACTGCTCTGGCTCTGGAGTCAAGTCCACTTTATTTC...TAACGCAGTTAAAAAGAGTTGAGCCTGAAAGTCATGAAGCATCTGTATCAGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTATTCATGATCCCCGTCCCATGTGTTCGAATCGAATTAGCAATGTGTCGAATCTGAATCCCAAATTTTaGAGGGTTGTGATGGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: CIHDPRPMCSNRISNVSNLNPKF*RVVMDR Trigger: TCTGTCCATCACAACCCTTCAAAATTTGGGATTCAG...ATTCGACACATTGCTAATTCGATTCGAACACATGGGACGGGGATCATGAATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR TCA 90 bp | GACACAGTGCTCTCGGGTCCATCTCCATTGCTTGTTTTAGTTTCTTCTTCCTTCCACATTTGCAAAAATTaGGCGAATGCTATGTGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: DTVLSGPSPLLVLVSSSFHICKN*ANAMCK Trigger: TTTGCACATAGCATTCGCTCAATTTTTGCAAATGTG...GAAGGAAGAAGAAACTAAAACAAGCAATGGAGATGGACCCGAGAGCACTGTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR TCA 90 bp | GACACAGTGCTCTCGGGTCCATCTCCATTGCTTGTTTTAGTTTCTTCTTCCTTCGCTGCTGGCATTTTATaGATCAGAAAATTATCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: DTVLSGPSPLLVLVSSSFAAGIL*IRKLSG Trigger: TCCTGATAATTTTCTGATTCATAAAATGCCAGCAGC...GAAGGAAGAAGAAACTAAAACAAGCAATGGAGATGGACCCGAGAGCACTGTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR GCA 90 bp | CACAGAGTGCCTTCAAACCTAGTGAAATGTCAAGTGGGTCCCGTCTATGGCTTATCAACTCTTTTTAACTaGGTTATTTACTGGCTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: HRVPSNLVKCQVGPVYGLSTLFN*VIYWLC Trigger: ACACAGCCAGTAAATAACGCAGTTAAAAAGAGTTGA...TAAGCCATAGACGGGACCCACTTGACATTTCACTAGGTTTGAAGGCACTCTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTTGGACTCGCTCTCTAAGCTCGCTGATAAGATCCAGCTTCTTCATGACTACTAATGTATCCATCCTCTaGTCTTTAGATAACATAGAC | + |
|
Preference number: 2 (lower is better) Translates to: AWTRSLSSLIRSSFFMTTNVSIL*SLDNID Trigger: GTCTATGTTATCTAAAGAGCAGAGGATGGATACATT...AGTAGTCATGAAGAAGCTGGATCTTATCAGCGAGCTTAGAGAGCGAGTCCAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTATTCATGATCCCCGTCCCATGTGTTCGAATCGAATTAGCAATGTGTCGAATTCCAAAAGCAGCTCATaGGACTCTAAATGCCTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: CIHDPRPMCSNRISNVSNSKSSS*DSKCLE Trigger: TTCAAGGCATTTAGAGTCCCATGAGCTGCTTTTGGA...ATTCGACACATTGCTAATTCGATTCGAACACATGGGACGGGGATCATGAATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR CAA 90 bp | TCGCTCTCTAAGCTCGCTGATAAGATCCAGCTTCTTCATGACTACTaGAAGGGGAAAGAGTTCTTCATCTTTAAATGTTTTCATTTGCGT | + |
|
Preference number: 2 (lower is better) Translates to: SLSKLADKIQLLHDY*KGKEFFIFKCFHLR Trigger: ACGCAAATGAAAACATTTAAAGATGAAGAACTCTTTCCCCTTCAAGTAGTCATGAAGAAGCTGGATCTTATCAGCGAGCTTAGAGAGCGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTATTCATGATCCCCGTCCCATGTGTTCGAATCGAATTAGCAATGTGTCGAATATAAGAAACCCTGTATaGAAACATTGCATCTGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: CIHDPRPMCSNRISNVSNIRNPV*KHCICW Trigger: CCAACAGATGCAATGTTTTCATACAGGGTTTCTTAT...ATTCGACACATTGCTAATTCGATTCGAACACATGGGACGGGGATCATGAATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTTTATTATACGTATTGTATTCTATTTGAGCCAAGGGAAAGGAGAACCCCAGATACAGATGCTTCATaGCTTTCAGGCTCAACTCTT | + |
|
Preference number: 2 (lower is better) Translates to: MLYYTYCILFEPRERRTPDTDAS*LSGSTL Trigger: AAGAGTTGAGCCTGAAAGTCATGAAGCATCTGTATC...TGGGGTTCTCCTTTCCCTTGGCTCAAATAGAATACAATACGTATAATAAAGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| 3UTR-3UTR TCA 90 bp | TCTCTGATACAGATGCTTCATGACTTTCAGGCTCAACTCTTTTTAACTGCGTTACAGATATTCCTCCATTaGGAGAATCAAACTGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SLIQMLHDFQAQLFLTALQIFLH*ENQTAV Trigger: AACAGCAGTTTGATTCTCTCAATGGAGGAATATCTG...TAACGCAGTTAAAAAGAGTTGAGCCTGAAAGTCATGAAGCATCTGTATCAGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR GCA 90 bp | GATATAGAAATTTCGGAGATGTATATTCTTTGGCCTTCGAAATTCTGGAGCAAAATTCCATCAAGTAACTaGCCTTCCAGCTTCAGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: DIEISEMYILWPSKFWSKIPSSN*PSSFSK Trigger: CTTGCTGAAGCTGGAAGGGCAGTTACTTGATGGAAT...TTTGCTCCAGAATTTCGAAGGCCAAAGAATATACATCTCCGAAATTTCTATATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR CCA 90 bp | CATCGACAGCATTTTCATATACATCATCTAAATAAATCGGGAAGACAGCGCGATTTCTGTCTAGAAGTTTaGCAGCTGCTGGCATTTTAT | + |
|
Preference number: 2 (lower is better) Translates to: HRQHFHIHHLNKSGRQRDFCLEV*QLLAFY Trigger: ATAAAATGCCAGCAGCTGCCAAACTTCTAGACAGAA...ATCGCGCTGTCTTCCCGATTTATTTAGATGATGTATATGAAAATGCTGTCGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR TCA 90 bp | CATCGACAGCATTTTCATATACATCATCTAAATAAATCGGGAAGACAGCGCGATGACTTGAGATCAACATaGATCAAAGACACAGACAAA | + |
|
Preference number: 2 (lower is better) Translates to: HRQHFHIHHLNKSGRQRDDLRST*IKDTDK Trigger: TTTGTCTGTGTCTTTGATTCATGTTGATCTCAAGTC...ATCGCGCTGTCTTCCCGATTTATTTAGATGATGTATATGAAAATGCTGTCGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTCAGCCAAAACAAGAGCAGATAGCACATCAAGACGCTGTTCACTATATTTTTAGTGGTCTTTCAGCGTaGCATGATTATCAACAATCT | + |
|
Preference number: 2 (lower is better) Translates to: FQPKQEQIAHQDAVHYIFSGLSA*HDYQQS Trigger: AGATTGTTGATAATCATGTCACGCTGAAAGACCACT...AAAAATATAGTGAACAGCGTCTTGATGTGCTATCTGCTCTTGTTTTGGCTGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGTAAGAGGAGGAACAATGATATAGAAATTTCGGAGATGTATATTCTTTGGAGCTTATCCAGCAAATaGTCATTTAAAATGTCCATG | + |
|
Preference number: 2 (lower is better) Translates to: QSKRRNNDIEISEMYILWSLSSK*SFKMSM Trigger: CATGGACATTTTAAATGAGCATTTGCTGGATAAGCT...CCAAAGAATATACATCTCCGAAATTTCTATATCATTGTTCCTCCTCTTACTCTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR CCA 72 bp | GGGTTAGGGATCTGGACTTGCCCTTCGCCAGCTTCATaGCAGTTTCACAGGGGCGCCTTCAGCCTACACTCC | + |
|
Preference number: 3 (lower is better) Translates to: GLGIWTCPSPAS*QFHRGAFSLHS Trigger: GGAGTGTAGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCCTAACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTTTTGCTTCTCGGCCCTaGAAAGCTGGAGCATCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LDLPFASFMAVSQGRLQPFASRP*KAGASE Trigger: TTCTGATGCTCCAGCTTTCAAGGGCCGAGAAGCAAA...AGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTATTTGCTTCTCGGCCCTaGAAAGCTGGAGCATCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: WTCPSPASWQFHRGAFSLFASRP*KAGASE Trigger: TTCTGATGCTCCAGCTTTCAAGGGCCGAGAAGCAAA...TAGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| 3UTR CCA 72 bp | CACGTGGAATCCAACAACACAGGAAGGATCACCAGCTaGCCACGCTGTGCACAGGCAGTAACAGTCTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: HVESNNTGRITS*PRCAQAVTVCS Trigger: TGAGCAGACTGTTACTGCCTGTGCACAGCGTGGCCAGCTGGTGATCCTTCCTGTGTTGTTGGATTCCACGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| 3UTR GCA 72 bp | CAACAACACAGGAAGGATCACCAGCTGGCCACGCTGTaGACAGGCAGTAACAGTCTGCTCATGTCTAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: QQHRKDHQLATL*TGSNSLLMSSI Trigger: GATGCTAGACATGAGCAGACTGTTACTGCCTGTGCACAGCGTGGCCAGCTGGTGATCCTTCCTGTGTTGTTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| 3UTR GCA 72 bp | TCTGACGACTGCACACCATCATTTCACCACGGGATCTaGAGACACAGTGCTCTCGGGTCCATCTCCATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SDDCTPSFHHGI*RHSALGSISIA Trigger: AGCAATGGAGATGGACCCGAGAGCACTGTGTCTGCAGATCCCGTGGTGAAATGATGGTGTGCAGTCGTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR CCA 72 bp | TTACAAACACACACAGAGTACAGGGAAGGGAGGCGATaGGTTAGGGATCTGGACTTGCCCTTCGCCAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LQTHTEYREGRR*VRDLDLPFASF Trigger: GAAGCTGGCGAAGGGCAAGTCCAGATCCCTAACCCATCGCCTCCCTTCCCTGTACTCTGTGTGTGTTTGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCACGGGATCTGCAGACACAGTGCTCTCGGGTCCATCTCCATTGCTTGTTTTAGAAATAAAGTGGACTaGACTCCAGAGCCAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: HHGICRHSALGSISIACFRNKVD*TPEPEQ Trigger: CTGCTCTGGCTCTGGAGTCAAGTCCACTTTATTTCT...AAAACAAGCAATGGAGATGGACCCGAGAGCACTGTGTCTGCAGATCCCGTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGATCTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTGTCGTTGTTTTGTGCTaGGTCCATTTAAGGTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: RDLDLPFASFMAVSQGRLVVVLC*VHLRCF Trigger: AAAACACCTTAAATGGACCAAGCACAAAACAACGAC...AAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR TCA 72 bp | CCAACTTTGAAGGGGTTCCGGTCATCCAGCTTCAAGTaGGTATGCACAGAAAGCCGCAAGTCCTTCTCGATC | + |
|
Preference number: 3 (lower is better) Translates to: PTLKGFRSSSFK*VCTESRKSFSI Trigger: GATCGAGAAGGACTTGCGGCTTTCTGTGCATACTCACTTGAAGCTGGATGACCGGAACCCCTTCAAAGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR GCA 72 bp | ATCGAGTCCCTGCTCCAAAGTCTGGCTAGGAAGATGTaGCTCTGTCATAACCAAACCATAACGCTGCGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: IESLLQSLARKM*LCHNQTITLRS Trigger: GCTACGCAGCGTTATGGTTTGGTTATGACAGAGGCACATCTTCCTAGCCAGACTTTGGAGCAGGGACTCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR CCA 72 bp | GCCAGAGCAGTCCGTACAGTCTCCTTAGGTGTGACCTaGGAAATGACAACTTATCAAGCACGCCATAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: ARAVRTVSLGVT*EMTTYQARHSI Trigger: GATGCTATGGCGTGCTTGATAAGTTGTCATTTCCCAGGTCACACCTAAGGAGACTGTACGGACTGCTCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| 3UTR CCA 72 bp | CTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: LVTDGCEPPCGC*DLNSGPSEEQS Trigger: CGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| 3UTR GCA 72 bp | GATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCTGGACCTTCGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLVTDGCEPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| 3UTR-3UTR CAA 90 bp | CCAAAGACATCAGCAGCTCATGTGAGTCACGTGGAATCCAACAACACAGGAAGGGAAGGCTCACCAAGCTaGGCTTCCACATTTGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PKTSAAHVSHVESNNTGREGSPS*ASTFAK Trigger: TTTTGCAAATGTGGAAGCCAAGCTTGGTGAGCCTTC...CCTTCCTGTGTTGTTGGATTCCACGTGACTCACATGAGCTGCTGATGTCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR TCA 72 bp | GAGAGAAAAAGAGCGCCAAGTCTTTCCTGCCAACTTTaGAGGGGTTCCGGTCATCCAGCTTCAAGTGAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: ERKRAPSLSCQL*RGSGHPASSEY Trigger: ATACTCACTTGAAGCTGGATGACCGGAACCCCTTCAAAGTTGGCAGGAAAGACTTGGCGCTCTTTTTCTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR TCA 72 bp | ACCTTCAGCAGAGTTCCGTGTATGATCACTGAGGACTaGGTCCAAATGCCTGGCTGCTCTAAGTGTTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TFSRVPCMITED*VQMPGCSKCFF Trigger: GAAGAAACACTTAGAGCAGCCAGGCATTTGGACTCAGTCCTCAGTGATCATACACGGAACTCTGCTGAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR GCA 72 bp | CTTCAGCCTACACTCCAAAGATCCAGTCTTACCGTTTaGTTCTCGGCCCTTGAAAGCTGGAGCATCAGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LQPTLQRSSLTV*FSALESWSIRN Trigger: ATTTCTGATGCTCCAGCTTTCAAGGGCCGAGAAGCAAACGGTAAGACTGGATCTTTGGAGTGTAGGCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| 3UTR GCA 72 bp | TCCAAAAGCAGCTCATGGGACTCTAAATGCCTTGAATaGATCATGGCAGGCACACAGTCTCGTAAAGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: SKSSSWDSKCLE*IMAGTQSRKAL Trigger: CAGTGCTTTACGAGACTGTGTGCCTGCCATGATGCATTCAAGGCATTTAGAGTCCCATGAGCTGCTTTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR CCA 72 bp | GAGCTGCCTGAACTGGTCAAGGTAGCTCTGTCCCTCTaGTGTGATTCCAAGTTTTCTTATGCCACGATTGAA | + |
|
Preference number: 3 (lower is better) Translates to: ELPELVKVALSL*CDSKFSYATIE Trigger: TTCAATCGTGGCATAAGAAAACTTGGAATCACACCAGAGGGACAGAGCTACCTTGACCAGTTCAGGCAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAAAGACATCAGCAGCTCATGTGAGTCACGTGGAATCCAACAACACAGGAAGGCATACTGAAGCCCTGTaGCTCAGCAGTTTAATACCA | + |
|
Preference number: 3 (lower is better) Translates to: PKTSAAHVSHVESNNTGRHTEAL*LSSLIP Trigger: TGGTATTAAACTGCTGAGCAACAGGGCTTCAGTATG...CCTTCCTGTGTTGTTGGATTCCACGTGACTCACATGAGCTGCTGATGTCTTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| 3UTR TCA 72 bp | ACTAAGAGCCTGATGTTGAAGGTGCTGTGTTATATGTaGCACCGAATCCGCCACAACCATGCTTCTCCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: TKSLMLKVLCYM*HRIRHNHASPV Trigger: TACAGGAGAAGCATGGTTGTGGCGGATTCGGTGTCACATATAACACAGCACCTTCAACATCAGGCTCTTAGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR CCA 72 bp | ATAATTTCCAGGACATCGAGTCCCTGCTCCAAAGTCTaGCTAGGAAGATGTGCCTCTGTCATAACCAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: IISRTSSPCSKV*LGRCASVITKP Trigger: TGGTTTGGTTATGACAGAGGCACATCTTCCTAGCCAGACTTTGGAGCAGGGACTCGATGTCCTGGAAATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR TCA 72 bp | AATGCATCATGGCAGGCACACAGTCTCGTAAAGCACTaGACATGTAATGTAATCTGGCTGCATCGACAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: NASWQAHSLVKH*TCNVIWLHRQH Trigger: ATGCTGTCGATGCAGCCAGATTACATTACATGTTCAGTGCTTTACGAGACTGTGTGCCTGCCATGATGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR CAA 90 bp | GACACAGTGCTCTCGGGTCCATCTCCATTGCTTGTTTTAGTTTCTTCTTCCTTCGATTTCAGCAACCTTTaGTACATAGTCCAGTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: DTVLSGPSPLLVLVSSSFDFSNL*YIVQWS Trigger: AGACCACTGGACTATGTACAAAAGGTTGCTGAAATC...GAAGGAAGAAGAAACTAAAACAAGCAATGGAGATGGACCCGAGAGCACTGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCAAGGAGAAATACAGCAGCTCAAATTCCTGTAAATAGACCTCCAGTCGCTCCTGAATCCCAAATTTaGAAGGGTTGTGATGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: CSRRNTAAQIPVNRPPVAPESQI*KGCDGQ Trigger: CTGTCCATCACAACCCTTCAAAATTTGGGATTCAGG...AGCGACTGGAGGTCTATTTACAGGAATTTGAGCTGCTGTATTTCTCCTTGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR TCA 72 bp | AGGCTCACCAAGCTTGGCTTCCACATTTGCAAAAATTaGGCGAATGCTATGTGCAAACTCTTCTGCAAACGT | + |
|
Preference number: 3 (lower is better) Translates to: RLTKLGFHICKN*ANAMCKLFCKR Trigger: ACGTTTGCAGAAGAGTTTGCACATAGCATTCGCTCAATTTTTGCAAATGTGGAAGCCAAGCTTGGTGAGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR TCA 72 bp | TACTGGCTGTGTACCGCATATGCACTGACTTTCCCATaGCTTGAGATCAACATGAATCAAAGACACAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: YWLCTAYALTFP*LEINMNQRHRQ Trigger: TTGTCTGTGTCTTTGATTCATGTTGATCTCAAGTCATGGGAAAGTCAGTGCATATGCGGTACACAGCCAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCTCCTGTAGAACATATGCTCTATTGCCTTGAGAAGTTCAATGAGCCTGCAAAAACATTGCATCTGTaGGTGAGGTCTTCAGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: ASPVEHMLYCLEKFNEPAKTLHL*VRSSAN Trigger: ATTTGCTGAAGACCTCACCAACAGATGCAATGTTTT...TGCAGGCTCATTGAACTTCTCAAGGCAATAGAGCATATGTTCTACAGGAGAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR TCA 72 bp | GCTGTGTACCGCATATGCACTGACTTTCCCATGACTTaGGATCAACATGAATCAAAGACACAGACAAATTAC | + |
|
Preference number: 3 (lower is better) Translates to: AVYRICTDFPMT*DQHESKTQTNY Trigger: GTAATTTGTCTGTGTCTTTGATTCATGTTGATCTCAAGTCATGGGAAAGTCAGTGCATATGCGGTACACAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| 3UTR GCA 72 bp | TTCTTCCTTCTCTTTCTTTTCTTGGTTCTCTTCAGCTaGGGTCTTGTCTGCTCTGAAGAATATTCTTGCACT | + |
|
Preference number: 3 (lower is better) Translates to: FFLLFLFLVLFS*GLVCSEEYSCT Trigger: AGTGCAAGAATATTCTTCAGAGCAGACAAGACCGCAGCTGAAGAGAACCAAGAAAAGAAAGAGAAGGAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR CCA 72 bp | CTTGTTTTAGTTTCTTCTTCCTTCTCTTTCTTTTCTTaGTTCTCTTCAGCTGCGGTCTTGTCTGCTCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LVLVSSSFSFFS*FSSAAVLSALK Trigger: CTTCAGAGCAGACAAGACCGCAGCTGAAGAGAACCAAGAAAAGAAAGAGAAGGAAGAAGAAACTAAAACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTTTATTATACGTATTGTATTCTATTTGAGCCAAGGGAAAGGAGAACCCCAAGAAATAAAGTGGACTaGACTCCAGAGCCAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: MLYYTYCILFEPRERRTPRNKVD*TPEPEQ Trigger: CTGCTCTGGCTCTGGAGTCAAGTCCACTTTATTTCT...TGGGGTTCTCCTTTCCCTTGGCTCAAATAGAATACAATACGTATAATAAAGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| 3UTR-3UTR CAA 90 bp | CATCGACAGCATTTTCATATACATCATCTAAATAAATCGGGAAGACAGCGCGATATATGCTCTATTGCCTaGAGAAGTTCAATGAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: HRQHFHIHHLNKSGRQRDICSIA*RSSMSL Trigger: CAGGCTCATTGAACTTCTCAAGGCAATAGAGCATAT...ATCGCGCTGTCTTCCCGATTTATTTAGATGATGTATATGAAAATGCTGTCGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR TCA 72 bp | CACTGTAAGTGGCCCAATCATGAAGAGCTACTGTTGTaGGATTGTAGAAAGTCTTATCCAGATAGTGAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: HCKWPNHEELLL*DCRKSYPDSEL Trigger: TAACTCACTATCTGGATAAGACTTTCTACAATCTCACAACAGTAGCTCTTCATGATTGGGCCACTTACAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR GCA 72 bp | CAAGCTTGGCTTCCACATTTGCAAAAATTGAGCGAATaGTATGTGCAAACTCTTCTGCAAACGTGCTATTTT | + |
|
Preference number: 3 (lower is better) Translates to: QAWLPHLQKLSE*YVQTLLQTCYF Trigger: AAAATAGCACGTTTGCAGAAGAGTTTGCACATAGCATTCGCTCAATTTTTGCAAATGTGGAAGCCAAGCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR TCA 72 bp | CTTTTGTACATAGTCCAGTGGTCTTTCAGCGTGACATaGTTATCAACAATCTCATCCAGGGTAAGTAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: LLYIVQWSFSVT*LSTISSRVSKT Trigger: AGTTTTACTTACCCTGGATGAGATTGTTGATAATCATGTCACGCTGAAAGACCACTGGACTATGTACAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTGGTCCTTGATCTCCCTGAAAAACCGAATATCTTTAATCAATCTGGATTTGACTAAGAGCCTGATGTaGAAGGTGCTGTGTTATATG | + |
|
Preference number: 3 (lower is better) Translates to: FWSLISLKNRISLINLDLTKSLM*KVLCYM Trigger: CATATAACACAGCACCTTCAACATCAGGCTCTTAGT...CAAATCCAGATTGATTAAAGATATTCGGTTTTTCAGGGAGATCAAGGACCAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGTAAGAGGAGGAACAATGATATAGAAATTTCGGAGATGTATATTCTTTGGCCACATTTGCAAAAATaGAGCGAATGCTATGTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: QSKRRNNDIEISEMYILWPHLQK*SECYVQ Trigger: TTGCACATAGCATTCGCTCAATTTTTGCAAATGTGG...CCAAAGAATATACATCTCCGAAATTTCTATATCATTGTTCCTCCTCTTACTCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTGGTCCTTGATCTCCCTGAAAAACCGAATATCTTTAATCAATCTGGATTTGAACAATAAGTCGTCGTaGTTTTGTGCTTGGTCCATT | + |
|
Preference number: 3 (lower is better) Translates to: FWSLISLKNRISLINLDLNNKSS*FCAWSI Trigger: AATGGACCAAGCACAAAACAACGACGACTTATTGTT...CAAATCCAGATTGATTAAAGATATTCGGTTTTTCAGGGAGATCAAGGACCAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| CDS-3UTR CCA 90 bp | CTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTCCCTGCTCCAAAGTCTaGCTAGGAAGATGTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDLPFASFMAVSQGRLQPPCSKV*LGRCAS Trigger: AGAGGCACATCTTCCTAGCCAGACTTTGGAGCAGGG...AGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| 3UTR CAA 72 bp | TACAGGGAAGGGAGGCGATGGGTTAGGGATCTGGACTaGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YREGRRWVRDLD*PFASFMAVSQG Trigger: CCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCCTAACCCATCGCCTCCCTTCCCTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| CDS-3UTR TCA 90 bp | GGGATCTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCTCCGTGTATGATCACTaGGGACTGAGTCCAAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GIWTCPSPASWQFHRGAFSVYDH*GLSPNA Trigger: GGCATTTGGACTCAGTCCTCAGTGATCATACACGGA...GAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | TGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTAGCAGAGTTCCGTGTATaGTCACTGAGGACTGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WTCPSPASWQFHRGAFSLAEFRV*SLRTES Trigger: GGACTCAGTCCTCAGTGATCATACACGGAACTCTGC...TAGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR CCA 90 bp | TGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTAAGGGCAGCCAGCTGGTaGATGACATTCATCACCACT | + |
|
Preference number: 4 (lower is better) Translates to: WTCPSPASWQFHRGAFSLRAASW*MTFITT Trigger: AGTGGTGATGAATGTCATCCACCAGCTGGCTGCCCT...TAGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| CDS-3UTR TCA 90 bp | GGGATCTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCACGAATCTCCCCATTTaGATTTGGCAGTCACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GIWTCPSPASWQFHRGAFTNLPI*IWQSPS Trigger: GGAAGGTGACTGCCAAATTCAAATGGGGAGATTCGT...GAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| CDS-3UTR GCA 90 bp | GGGATCTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGGACTGAGTCCAAATaGCTGGCTGCTCTAAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GIWTCPSPASWQFHRGAFRTESK*LAALSV Trigger: AACACTTAGAGCAGCCAGGCATTTGGACTCAGTCCT...GAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| 3UTR CAA 72 bp | GAGACAGTTGCCCTGACCGCAACCACTGAGTCTAGGTaGGGCACTGTATCTCCACTCCAAAAGCGGGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: ETVALTATTESR*GTVSPLQKREP Trigger: TGGTTCCCGCTTTTGGAGTGGAGATACAGTGCCCAACCTAGACTCAGTGGTTGCGGTCAGGGCAACTGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR GCA 90 bp | CTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTATTCCATCAAGTAACTaGCCTTCCAGCTTCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LDLPFASFMAVSQGRLQPIPSSN*PSSFSK Trigger: CTTGCTGAAGCTGGAAGGGCAGTTACTTGATGGAAT...AGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR GCA 90 bp | CTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTCGTGCCAACGCTCAATaGCAAAGAAACAATAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LDLPFASFMAVSQGRLQPRANAQ*QRNNKS Trigger: CGACTTATTGTTTCTTTGGCATTGAGCGTTGGCACG...AGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR GCA 90 bp | AGGGATCTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTGACTGCACGTTCTGTTaGTTAGCAACTGCTCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: RDLDLPFASFMAVSQGRLDCTFC*LATALI Trigger: GATCAGAGCAGTTGCTAAGCAACAGAACGTGCAGTC...AAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | GGCGCCTTCAGCCTACACTCCAAAGATCCAGTCTTACCGTTTGCTTCTCGGCCCCGGTCTTGTCTGCTCTaGAGAATATTCTTGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GAFSLHSKDPVLPFASRPRSCLL*RIFLHC Trigger: GCAGTGCAAGAATATTCTTCAGAGCAGACAAGACCG...GGGCCGAGAAGCAAACGGTAAGACTGGATCTTTGGAGTGTAGGCTGAAGGCGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR GCA 90 bp | AGGGATCTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTGATCTCGCAACAAAGTaGCGCATAAACAGTGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: RDLDLPFASFMAVSQGRLDLATK*RINSDD Trigger: GTCATCACTGTTTATGCGGCACTTTGTTGCGAGATC...AAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| CDS-3UTR GCA 90 bp | TGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTAGATCTCGCAACAAAGTaGCGCATAAACAGTGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: WTCPSPASWQFHRGAFSLDLATK*RINSDD Trigger: GTCATCACTGTTTATGCGGCACTTTGTTGCGAGATC...TAGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| CDS-3UTR GCA 90 bp | CTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTGTCGTCGTTGTTTTGTaGTTGGTCCATTTAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LDLPFASFMAVSQGRLQPVVVVL*LVHLRC Trigger: ACACCTTAAATGGACCAAGCACAAAACAACGACGAC...AGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR CCA 90 bp | CTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTAAGGCTCACCAAGCTTaGCTTCCACATTTGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LDLPFASFMAVSQGRLQPKAHQA*LPHLQK Trigger: TTTTTGCAAATGTGGAAGCCAAGCTTGGTGAGCCTT...AGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR CCA 90 bp | AGGGATCTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTGTAGCTCTGTCCCTCTaGTGTGATTCCAAGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RDLDLPFASFMAVSQGRLVALSL*CDSKFS Trigger: AGAAAACTTGGAATCACACCAGAGGGACAGAGCTAC...AAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | AGGGATCTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCTGAATCCCAAATTTTaGAGGGTTGTGATGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RDLDLPFASFMAVSQGRLLNPKF*RVVMDR Trigger: TCTGTCCATCACAACCCTTCAAAATTTGGGATTCAG...AAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | TGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTAACAGTCCGAAAAATCTaGAAGTGCAGTACAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WTCPSPASWQFHRGAFSLTVRKI*KCSTKS Trigger: GCTCTTTGTACTGCACTTTCAGATTTTTCGGACTGT...TAGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | GCCAGAGCAGTCCGTACAGTCTCCTTAGGTGTGACCTGGGAAATGACAACTTATCAGCCAGCTGGTGGATaGCATTCATCACCACTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ARAVRTVSLGVTWEMTTYQPAGG*HSSPLR Trigger: ACGAAGTGGTGATGAATGTCATCCACCAGCTGGCTG...ATAAGTTGTCATTTCCCAGGTCACACCTAAGGAGACTGTACGGACTGCTCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| CDS-3UTR TCA 90 bp | TGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTATTCTTCATGACTACTTaGAGGGGAAAGAGTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WTCPSPASWQFHRGAFSLFFMTT*RGKSSS Trigger: TGAAGAACTCTTTCCCCTTCAAGTAGTCATGAAGAA...TAGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | CTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTGAAGAGCTACTGTTGTaGGATTGTAGAAAGTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LDLPFASFMAVSQGRLQPEELLL*DCRKSY Trigger: ATAAGACTTTCTACAATCTCACAACAGTAGCTCTTC...AGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | GGCGCCTTCAGCCTACACTCCAAAGATCCAGTCTTACCGTTTGCTTCTCGGCCCCTGGAACCAATGAAGTaGATCAAACTCTTGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: GAFSLHSKDPVLPFASRPLEPMK*IKLLVL Trigger: CAGTACCAAGAGTTTGATTCACTTCATTGGTTCCAG...GGGCCGAGAAGCAAACGGTAAGACTGGATCTTTGGAGTGTAGGCTGAAGGCGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR GCA 90 bp | GTGACCTGGGAAATGACAACTTATCAAGCACGCCATAGCATCCATGTCTCTGGATTTCACCACGGGATCTaGAGACACAGTGCTCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VTWEMTTYQARHSIHVSGFHHGI*RHSALG Trigger: CCCGAGAGCACTGTGTCTGCAGATCCCGTGGTGAAA...TCCAGAGACATGGATGCTATGGCGTGCTTGATAAGTTGTCATTTCCCAGGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR CCA 90 bp | GCCAGAGCAGTCCGTACAGTCTCCTTAGGTGTGACCTGGGAAATGACAACTTATAGGGCAGCCAGCTGGTaGATGACATTCATCACCACT | + |
|
Preference number: 4 (lower is better) Translates to: ARAVRTVSLGVTWEMTTYRAASW*MTFITT Trigger: AGTGGTGATGAATGTCATCCACCAGCTGGCTGCCCT...ATAAGTTGTCATTTCCCAGGTCACACCTAAGGAGACTGTACGGACTGCTCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| CDS-3UTR CCA 90 bp | CCAAAGACATCAGCAGCTCATGTGAGTCACGTGGAATCCAACAACACAGGAAGGTACAGGGCAGCCAGCTaGTGGATGACATTCATCACC | + |
|
Preference number: 4 (lower is better) Translates to: PKTSAAHVSHVESNNTGRYRAAS*WMTFIT Trigger: GGTGATGAATGTCATCCACCAGCTGGCTGCCCTGTA...CCTTCCTGTGTTGTTGGATTCCACGTGACTCACATGAGCTGCTGATGTCTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| 3UTR CAA 72 bp | GCCCTTGAAAGCTGGAGCATCAGAAATAAAGTGGACTaGACTCCAGAGCCAGAGCAGTCCGTACAGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALESWSIRNKVD*TPEPEQSVQSP Trigger: AGGAGACTGTACGGACTGCTCTGGCTCTGGAGTCAAGTCCACTTTATTTCTGATGCTCCAGCTTTCAAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| CDS-3UTR TCA 90 bp | TGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTACATATTTTAATTTCTTaGTCTCGCAACAAAGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: WTCPSPASWQFHRGAFSLHILIS*SRNKVP Trigger: CGGCACTTTGTTGCGAGATCAAGAAATTAAAATATG...TAGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| CDS-3UTR TCA 90 bp | CACAGAGTGCCTTCAAACCTAGTGAAATGTCAAGTGGGTCCCGTCTATGGCTTACAGCCAGCTGGTGGATaGCATTCATCACCACTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HRVPSNLVKCQVGPVYGLQPAGG*HSSPLR Trigger: ACGAAGTGGTGATGAATGTCATCCACCAGCTGGCTG...TAAGCCATAGACGGGACCCACTTGACATTTCACTAGGTTTGAAGGCACTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| CDS-3UTR TCA 90 bp | GGCGCCTTCAGCCTACACTCCAAAGATCCAGTCTTACCGTTTGCTTCTCGGCCCAGTGGTCTTTCAGCGTaGCATGATTATCAACAATCT | + |
|
Preference number: 4 (lower is better) Translates to: GAFSLHSKDPVLPFASRPSGLSA*HDYQQS Trigger: AGATTGTTGATAATCATGTCACGCTGAAAGACCACT...GGGCCGAGAAGCAAACGGTAAGACTGGATCTTTGGAGTGTAGGCTGAAGGCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | TGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTACACATTTGCAAAAATTaGGCGAATGCTATGTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WTCPSPASWQFHRGAFSLHICKN*ANAMCK Trigger: TTTGCACATAGCATTCGCTCAATTTTTGCAAATGTG...TAGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | GACATCAGCAGCTCATGTGAGTCACGTGGAATCCAACAACACAGGAAGGATCACGTGCTGTGTTATATGTaGCACCGAATCCGCCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: DISSSCESRGIQQHRKDHVLCYM*HRIRHN Trigger: GTTGTGGCGGATTCGGTGTCACATATAACACAGCAC...GTGATCCTTCCTGTGTTGTTGGATTCCACGTGACTCACATGAGCTGCTGATGTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | GCCAGAGCAGTCCGTACAGTCTCCTTAGGTGTGACCTGGGAAATGACAACTTATTCATCCAGCTTCAAGTaGGTATGCACAGAAAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ARAVRTVSLGVTWEMTTYSSSFK*VCTESR Trigger: GCGGCTTTCTGTGCATACTCACTTGAAGCTGGATGA...ATAAGTTGTCATTTCCCAGGTCACACCTAAGGAGACTGTACGGACTGCTCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | GACATCAGCAGCTCATGTGAGTCACGTGGAATCCAACAACACAGGAAGGATCACACCTCCAGTCGCTTCTaGGTAAGGTTCATGGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DISSSCESRGIQQHRKDHTSSRF*VRFMVW Trigger: CCAAACCATGAACCTTACTCAGAAGCGACTGGAGGT...GTGATCCTTCCTGTGTTGTTGGATTCCACGTGACTCACATGAGCTGCTGATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR CCA 90 bp | GGCGCCTTCAGCCTACACTCCAAAGATCCAGTCTTACCGTTTGCTTCTCGGCCCGAGATGTATATTCTTTaGCCTTCGAAATTCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GAFSLHSKDPVLPFASRPEMYIL*PSKFWS Trigger: GCTCCAGAATTTCGAAGGCCAAAGAATATACATCTC...GGGCCGAGAAGCAAACGGTAAGACTGGATCTTTGGAGTGTAGGCTGAAGGCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | GACATCAGCAGCTCATGTGAGTCACGTGGAATCCAACAACACAGGAAGGATCACGATCCAGCTTCTTCATaGCTACTTGAAGGGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DISSSCESRGIQQHRKDHDPASS*LLEGER Trigger: TCTTTCCCCTTCAAGTAGTCATGAAGAAGCTGGATC...GTGATCCTTCCTGTGTTGTTGGATTCCACGTGACTCACATGAGCTGCTGATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | GCCAGAGCAGTCCGTACAGTCTCCTTAGGTGTGACCTGGGAAATGACAACTTATTCTGTCCCTCTGGTGTaGTTCCAAGTTTTCTTATGC | + |
|
Preference number: 4 (lower is better) Translates to: ARAVRTVSLGVTWEMTTYSVPLV*FQVFLC Trigger: GCATAAGAAAACTTGGAATCACACCAGAGGGACAGA...ATAAGTTGTCATTTCCCAGGTCACACCTAAGGAGACTGTACGGACTGCTCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR GCA 90 bp | CCAAAGACATCAGCAGCTCATGTGAGTCACGTGGAATCCAACAACACAGGAAGGTCTAAATGCCTTGAATaGATCATGGCAGGCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: PKTSAAHVSHVESNNTGRSKCLE*IMAGTQ Trigger: CTGTGTGCCTGCCATGATGCATTCAAGGCATTTAGA...CCTTCCTGTGTTGTTGGATTCCACGTGACTCACATGAGCTGCTGATGTCTTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR GCA 90 bp | CTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGATTGGTTCTCTTCAGCTaGGGTCTTGTCTGCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVTDGCEPPCGCWDLNSGLVLFS*GLVCSE Trigger: TTCAGAGCAGACAAGACCGCAGCTGAAGAGAACCAA...TCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | GACATCAGCAGCTCATGTGAGTCACGTGGAATCCAACAACACAGGAAGGATCACTCTTTGTTAAGTGACTaGGCTTTCTGCTGTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DISSSCESRGIQQHRKDHSLLSD*AFCCRK Trigger: CTTCCTACAGCAGAAAGCTCAGTCACTTAACAAAGA...GTGATCCTTCCTGTGTTGTTGGATTCCACGTGACTCACATGAGCTGCTGATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | CCAAAGACATCAGCAGCTCATGTGAGTCACGTGGAATCCAACAACACAGGAAGGCATCTTCATCATCCATaGGCTCACAAAGACGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PKTSAAHVSHVESNNTGRHLHHP*AHKDVV Trigger: TACTACGTCTTTGTGAGCTCATGGATGATGAAGATG...CCTTCCTGTGTTGTTGGATTCCACGTGACTCACATGAGCTGCTGATGTCTTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | GACATCAGCAGCTCATGTGAGTCACGTGGAATCCAACAACACAGGAAGGATCACTTCATCTTGACTAGTTaGCTGCACGTTCTGTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DISSSCESRGIQQHRKDHFILTS*LHVLLL Trigger: AAGCAACAGAACGTGCAGTCAACTAGTCAAGATGAA...GTGATCCTTCCTGTGTTGTTGGATTCCACGTGACTCACATGAGCTGCTGATGTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| 3UTR CAA 72 bp | AGCAATCCAAAAGCAGCTCATGGGACTCTAAATGCCTaGAATGCATCATGGCAGGCACACAGTCTCGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNPKAAHGTLNA*NASWQAHSLVK Trigger: CTTTACGAGACTGTGTGCCTGCCATGATGCATTCAAGGCATTTAGAGTCCCATGAGCTGCTTTTGGATTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| CDS-3UTR TCA 90 bp | CCAAAGACATCAGCAGCTCATGTGAGTCACGTGGAATCCAACAACACAGGAAGGTCTTTCAGCGTGACATaGTTATCAACAATCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PKTSAAHVSHVESNNTGRSFSVT*LSTISS Trigger: GGATGAGATTGTTGATAATCATGTCACGCTGAAAGA...CCTTCCTGTGTTGTTGGATTCCACGTGACTCACATGAGCTGCTGATGTCTTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | GTGACCTGGGAAATGACAACTTATCAAGCACGCCATAGCATCCATGTCTCTGGACATTGCATCTGTTGGTaGGGTCTTCAGCAAATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VTWEMTTYQARHSIHVSGHCICW*GLQQMY Trigger: ATACATTTGCTGAAGACCTCACCAACAGATGCAATG...TCCAGAGACATGGATGCTATGGCGTGCTTGATAAGTTGTCATTTCCCAGGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | GACATCAGCAGCTCATGTGAGTCACGTGGAATCCAACAACACAGGAAGGATCACTGTTTTCAGTCTTTATaGGTTCCAAAAGGGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: DISSSCESRGIQQHRKDHCFQSL*VPKGKT Trigger: AGTCTTCCCTTTTGGAACTCATAAAGACTGAAAACA...GTGATCCTTCCTGTGTTGTTGGATTCCACGTGACTCACATGAGCTGCTGATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| CDS-3UTR TCA 90 bp | GTGACCTGGGAAATGACAACTTATCAAGCACGCCATAGCATCCATGTCTCTGGATGTTCGATACAGGCCTaGAATATCATTCCATCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VTWEMTTYQARHSIHVSGCSIQA*NIIPSS Trigger: ACTTGATGGAATGATATTTCAGGCCTGTATCGAACA...TCCAGAGACATGGATGCTATGGCGTGCTTGATAAGTTGTCATTTCCCAGGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR GCA 90 bp | CCAAAGACATCAGCAGCTCATGTGAGTCACGTGGAATCCAACAACACAGGAAGGAGAATATTCTTGCACTaGTCAAGGAGAAATACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PKTSAAHVSHVESNNTGRRIFLH*SRRNTA Trigger: TGCTGTATTTCTCCTTGAGCAGTGCAAGAATATTCT...CCTTCCTGTGTTGTTGGATTCCACGTGACTCACATGAGCTGCTGATGTCTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR CCA 90 bp | CATCGACAGCATTTTCATATACATCATCTAAATAAATCGGGAAGACAGCGCGATTACAGGGCAGCCAGCTaGTGGATGACATTCATCACC | + |
|
Preference number: 4 (lower is better) Translates to: HRQHFHIHHLNKSGRQRDYRAAS*WMTFIT Trigger: GGTGATGAATGTCATCCACCAGCTGGCTGCCCTGTA...ATCGCGCTGTCTTCCCGATTTATTTAGATGATGTATATGAAAATGCTGTCGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| CDS-3UTR CCA 90 bp | CTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGATACTTGTGGTCATTTTaGTCCTTGATCTCCCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LVTDGCEPPCGCWDLNSGYLWSF*SLISLK Trigger: TTTCAGGGAGATCAAGGACCAAAATGACCACAAGTA...TCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR CCA 90 bp | CTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGATGGCCTTCGAAATTCTaGAGCAAAAACATCTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVTDGCEPPCGCWDLNSGWPSKF*SKNIYK Trigger: CTTGTAGATGTTTTTGCTCCAGAATTTCGAAGGCCA...TCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | CACAGAGTGCCTTCAAACCTAGTGAAATGTCAAGTGGGTCCCGTCTATGGCTTACATATTTTAATTTCTTaGTCTCGCAACAAAGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: HRVPSNLVKCQVGPVYGLHILIS*SRNKVP Trigger: CGGCACTTTGTTGCGAGATCAAGAAATTAAAATATG...TAAGCCATAGACGGGACCCACTTGACATTTCACTAGGTTTGAAGGCACTCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| CDS-3UTR TCA 90 bp | CACAGAGTGCCTTCAAACCTAGTGAAATGTCAAGTGGGTCCCGTCTATGGCTTAGCTGCTGGCATTTTATaGATCAGAAAATTATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HRVPSNLVKCQVGPVYGLAAGIL*IRKLSG Trigger: TCCTGATAATTTTCTGATTCATAAAATGCCAGCAGC...TAAGCCATAGACGGGACCCACTTGACATTTCACTAGGTTTGAAGGCACTCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | CACAGAGTGCCTTCAAACCTAGTGAAATGTCAAGTGGGTCCCGTCTATGGCTTAATAAGAAACCCTGTATaGAAACATTGCATCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HRVPSNLVKCQVGPVYGLIRNPV*KHCICW Trigger: CCAACAGATGCAATGTTTTCATACAGGGTTTCTTAT...TAAGCCATAGACGGGACCCACTTGACATTTCACTAGGTTTGAAGGCACTCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | GTGACCTGGGAAATGACAACTTATCAAGCACGCCATAGCATCCATGTCTCTGGATCAAACTCTTGGTACTaGTCCAAAAGCTTTAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VTWEMTTYQARHSIHVSGSNSWY*SKSFKV Trigger: TACCTTAAAGCTTTTGGATCAGTACCAAGAGTTTGA...TCCAGAGACATGGATGCTATGGCGTGCTTGATAAGTTGTCATTTCCCAGGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR CCA 90 bp | CTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGATCAAAAGGATACTTGTaGTCATTTTGGTCCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: LVTDGCEPPCGCWDLNSGSKGYL*SFWSLI Trigger: GATCAAGGACCAAAATGACCACAAGTATCCTTTTGA...TCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR CCA 90 bp | ATGCTTTATTATACGTATTGTATTCTATTTGAGCCAAGGGAAAGGAGAACCCCAGCCTTGAATGCATCATaGCAGGCACACAGTCTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: MLYYTYCILFEPRERRTPALNAS*QAHSLV Trigger: TACGAGACTGTGTGCCTGCCATGATGCATTCAAGGC...TGGGGTTCTCCTTTCCCTTGGCTCAAATAGAATACAATACGTATAATAAAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| 3UTR CAA 72 bp | CAATTTCAGAAGGCTCACCAAGCTTGGCTTCCACATTaGCAAAAATTGAGCGAATGCTATGTGCAAACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QFQKAHQAWLPH*QKLSECYVQTL Trigger: AAGAGTTTGCACATAGCATTCGCTCAATTTTTGCAAATGTGGAAGCCAAGCTTGGTGAGCCTTCTGAAATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| 3UTR CAA 72 bp | GCTTGTTTTAGTTTCTTCTTCCTTCTCTTTCTTTTCTaGGTTCTCTTCAGCTGCGGTCTTGTCTGCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ACFSFFFLLFLF*VLFSCGLVCSE Trigger: TTCAGAGCAGACAAGACCGCAGCTGAAGAGAACCAAGAAAAGAAAGAGAAGGAAGAAGAAACTAAAACAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| CDS-3UTR TCA 90 bp | TGTATTCATGATCCCCGTCCCATGTGTTCGAATCGAATTAGCAATGTGTCGAATTGTTTTCAGTCTTTATaGGTTCCAAAAGGGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: CIHDPRPMCSNRISNVSNCFQSL*VPKGKT Trigger: AGTCTTCCCTTTTGGAACTCATAAAGACTGAAAACA...ATTCGACACATTGCTAATTCGATTCGAACACATGGGACGGGGATCATGAATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
||
| CDS-3UTR TCA 90 bp | ATGCTTTATTATACGTATTGTATTCTATTTGAGCCAAGGGAAAGGAGAACCCCAGCATTGCTGCTACAATaGAGACCACCAGATCTTATC | + |
|
Preference number: 4 (lower is better) Translates to: MLYYTYCILFEPRERRTPALLLQ*RPPDLI Trigger: GATAAGATCTGGTGGTCTTCATTGTAGCAGCAATGC...TGGGGTTCTCCTTTCCCTTGGCTCAAATAGAATACAATACGTATAATAAAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | TCTCTGATACAGATGCTTCATGACTTTCAGGCTCAACTCTTTTTAACTGCGTTAACAGACTGGAACCAATaGAGTGAATCAAACTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLIQMLHDFQAQLFLTALTDWNQ*SESNSW Trigger: CCAAGAGTTTGATTCACTTCATTGGTTCCAGTCTGT...TAACGCAGTTAAAAAGAGTTGAGCCTGAAAGTCATGAAGCATCTGTATCAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR CCA 90 bp | TCTCTGATACAGATGCTTCATGACTTTCAGGCTCAACTCTTTTTAACTGCGTTATCCAAAAGCAGCTCATaGGACTCTAAATGCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLIQMLHDFQAQLFLTALSKSSS*DSKCLE Trigger: TTCAAGGCATTTAGAGTCCCATGAGCTGCTTTTGGA...TAACGCAGTTAAAAAGAGTTGAGCCTGAAAGTCATGAAGCATCTGTATCAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR GCA 90 bp | ATGCTTTATTATACGTATTGTATTCTATTTGAGCCAAGGGAAAGGAGAACCCCAAATCCGCCACAACCATaGTTCTCCTGTAGAACATAT | + |
|
Preference number: 4 (lower is better) Translates to: MLYYTYCILFEPRERRTPNPPQP*FSCRTY Trigger: ATATGTTCTACAGGAGAAGCATGGTTGTGGCGGATT...TGGGGTTCTCCTTTCCCTTGGCTCAAATAGAATACAATACGTATAATAAAGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR GCA 90 bp | TCTCTGATACAGATGCTTCATGACTTTCAGGCTCAACTCTTTTTAACTGCGTTATTAAATGTTTTCATTTaGGTGCCAACGCTCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLIQMLHDFQAQLFLTALLNVFI*VPTLNA Trigger: GGCATTGAGCGTTGGCACGCAAATGAAAACATTTAA...TAACGCAGTTAAAAAGAGTTGAGCCTGAAAGTCATGAAGCATCTGTATCAGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR CCA 90 bp | TCTCTGATACAGATGCTTCATGACTTTCAGGCTCAACTCTTTTTAACTGCGTTATTCTGTCTAGAAGTTTaGCAGCTGCTGGCATTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SLIQMLHDFQAQLFLTALFCLEV*QLLAFY Trigger: ATAAAATGCCAGCAGCTGCCAAACTTCTAGACAGAA...TAACGCAGTTAAAAAGAGTTGAGCCTGAAAGTCATGAAGCATCTGTATCAGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR TCA 90 bp | ATGCTTTATTATACGTATTGTATTCTATTTGAGCCAAGGGAAAGGAGAACCCCACAGATATTCCTCCATTaGGAGAATCAAACTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MLYYTYCILFEPRERRTPQIFLH*ENQTAV Trigger: AACAGCAGTTTGATTCTCTCAATGGAGGAATATCTG...TGGGGTTCTCCTTTCCCTTGGCTCAAATAGAATACAATACGTATAATAAAGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR GCA 90 bp | TCTCTGATACAGATGCTTCATGACTTTCAGGCTCAACTCTTTTTAACTGCGTTAAATGTATCCATCCTCTaGTCTTTAGATAACATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLIQMLHDFQAQLFLTALNVSIL*SLDNID Trigger: GTCTATGTTATCTAAAGAGCAGAGGATGGATACATT...TAACGCAGTTAAAAAGAGTTGAGCCTGAAAGTCATGAAGCATCTGTATCAGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR GCA 90 bp | TCTCTGATACAGATGCTTCATGACTTTCAGGCTCAACTCTTTTTAACTGCGTTAAGCTTATCCAGCAAATaGTCATTTAAAATGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SLIQMLHDFQAQLFLTALSLSSK*SFKMSM Trigger: CATGGACATTTTAAATGAGCATTTGCTGGATAAGCT...TAACGCAGTTAAAAAGAGTTGAGCCTGAAAGTCATGAAGCATCTGTATCAGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR GCA 90 bp | TCTCTGATACAGATGCTTCATGACTTTCAGGCTCAACTCTTTTTAACTGCGTTATCTGAAGAATATTCTTaGACTGCTCAAGGAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: SLIQMLHDFQAQLFLTALSEEYS*TAQGEI Trigger: TATTTCTCCTTGAGCAGTGCAAGAATATTCTTCAGA...TAACGCAGTTAAAAAGAGTTGAGCCTGAAAGTCATGAAGCATCTGTATCAGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR CAA 90 bp | CTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTTTGGGTCCTATCTTGTaGCTGATGTACAGGGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LDLPFASFMAVSQGRLQPLGPIL*LMYRAA Trigger: GGCTGCCCTGTACATCAGCAACAAGATAGGACCCAA...AGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
||
| CDS-3UTR CAA 90 bp | GGGATCTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCGGGACTCTAAATGCCTaGAATGCATCATGGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GIWTCPSPASWQFHRGAFGTLNA*NASWQA Trigger: TGCCTGCCATGATGCATTCAAGGCATTTAGAGTCCC...GAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR CAA 90 bp | CTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTGAAGGCTCACCAAGCTaGGCTTCCACATTTGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LDLPFASFMAVSQGRLQPEGSPS*ASTFAK Trigger: TTTTGCAAATGTGGAAGCCAAGCTTGGTGAGCCTTC...AGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR CAA 90 bp | GGGATCTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCGCCTTCACTGAAGTTTaGGTCATAGGCTTCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: GIWTCPSPASWQFHRGAFAFTEV*VIGFCM Trigger: CATGCAGAAGCCTATGACCAAAACTTCAGTGAAGGC...GAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
||
| CDS-3UTR CAA 90 bp | GGGATCTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCCCTGAATCCCAAATTTaGAAGGGTTGTGATGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: GIWTCPSPASWQFHRGAFPESQI*KGCDGQ Trigger: CTGTCCATCACAACCCTTCAAAATTTGGGATTCAGG...GAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| CDS-3UTR CAA 90 bp | CTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTCCCTGTATGAAAACATaGCATCTGTTGGTGAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LDLPFASFMAVSQGRLQPPCMKT*HLLVRS Trigger: AGACCTCACCAACAGATGCAATGTTTTCATACAGGG...AGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| CDS-3UTR CAA 90 bp | GGCGCCTTCAGCCTACACTCCAAAGATCCAGTCTTACCGTTTGCTTCTCGGCCCTCTCCCCATTTGAATTaGGCAGTCACCTTCCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: GAFSLHSKDPVLPFASRPSPHLN*AVTFHH Trigger: ATGGTGGAAGGTGACTGCCAAATTCAAATGGGGAGA...GGGCCGAGAAGCAAACGGTAAGACTGGATCTTTGGAGTGTAGGCTGAAGGCGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
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| CDS-3UTR CAA 90 bp | TGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTAAACGAATCTCCCCATTaGAATTTGGCAGTCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WTCPSPASWQFHRGAFSLNESPH*NLAVTF Trigger: GAAGGTGACTGCCAAATTCAAATGGGGAGATTCGTT...TAGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
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| CDS-3UTR CAA 90 bp | CTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTGATTTCAGCAACCTTTaGTACATAGTCCAGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LDLPFASFMAVSQGRLQPDFSNL*YIVQWS Trigger: AGACCACTGGACTATGTACAAAAGGTTGCTGAAATC...AGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| CDS-3UTR CAA 90 bp | CTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTACTAAGAGCCTGATGTaGAAGGTGCTGTGTTATATG | + |
|
Preference number: 5 (lower is better) Translates to: LDLPFASFMAVSQGRLQPTKSLM*KVLCYM Trigger: CATATAACACAGCACCTTCAACATCAGGCTCTTAGT...AGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| CDS-3UTR CAA 90 bp | GGCGCCTTCAGCCTACACTCCAAAGATCCAGTCTTACCGTTTGCTTCTCGGCCCAACGAATCTCCCCATTaGAATTTGGCAGTCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GAFSLHSKDPVLPFASRPNESPH*NLAVTF Trigger: GAAGGTGACTGCCAAATTCAAATGGGGAGATTCGTT...GGGCCGAGAAGCAAACGGTAAGACTGGATCTTTGGAGTGTAGGCTGAAGGCGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
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| CDS-3UTR CAA 90 bp | CTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTGTTGTCTCTATAATTTaGGGTCCTATCTTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LDLPFASFMAVSQGRLQPVVSII*GPILLL Trigger: CAGCAACAAGATAGGACCCAAAATTATAGAGACAAC...AGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
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| CDS-3UTR CAA 90 bp | AGGGATCTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTTTTCTGTCTAGAAGTTaGGCAGCTGCTGGCATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: RDLDLPFASFMAVSQGRLFLSRS*AAAGIL Trigger: TAAAATGCCAGCAGCTGCCAAACTTCTAGACAGAAA...AAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| CDS-3UTR CAA 90 bp | GGGATCTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAAAACATTGCATCTGTaGGTGAGGTCTTCAGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GIWTCPSPASWQFHRGAFKTLHL*VRSSAN Trigger: ATTTGCTGAAGACCTCACCAACAGATGCAATGTTTT...GAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| CDS-3UTR CAA 90 bp | GGGATCTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCGTCGTTGTTTTGTGCTaGGTCCATTTAAGGTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GIWTCPSPASWQFHRGAFVVVLC*VHLRCF Trigger: AAAACACCTTAAATGGACCAAGCACAAAACAACGAC...GAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| CDS-3UTR CAA 90 bp | TGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCAGCCTACTTCTTCATGACTACTaGAAGGGGAAAGAGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WTCPSPASWQFHRGAFSLLLHDY*KGKEFF Trigger: GAAGAACTCTTTCCCCTTCAAGTAGTCATGAAGAAG...TAGGCTGAAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| CDS-3UTR CAA 90 bp | AGGGATCTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTTCGGGTCCATCTCCATaGCTTGTTTTAGTTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RDLDLPFASFMAVSQGRLSGPSP*LVLVSS Trigger: AGAAGAAACTAAAACAAGCAATGGAGATGGACCCGA...AAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| CDS-3UTR CAA 90 bp | GACATCAGCAGCTCATGTGAGTCACGTGGAATCCAACAACACAGGAAGGATCACTTGGGTCCTATCTTGTaGCTGATGTACAGGGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DISSSCESRGIQQHRKDHLGPIL*LMYRAA Trigger: GGCTGCCCTGTACATCAGCAACAAGATAGGACCCAA...GTGATCCTTCCTGTGTTGTTGGATTCCACGTGACTCACATGAGCTGCTGATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
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| CDS-3UTR CAA 90 bp | AGGGATCTGGACTTGCCCTTCGCCAGCTTCATGGCAGTTTCACAGGGGCGCCTTCCACATTTGCAAAAATaGAGCGAATGCTATGTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: RDLDLPFASFMAVSQGRLPHLQK*SECYVQ Trigger: TTGCACATAGCATTCGCTCAATTTTTGCAAATGTGG...AAGGCGCCCCTGTGAAACTGCCATGAAGCTGGCGAAGGGCAAGTCCAGATCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| CDS-3UTR CAA 90 bp | GGCGCCTTCAGCCTACACTCCAAAGATCCAGTCTTACCGTTTGCTTCTCGGCCCATATGCTCTATTGCCTaGAGAAGTTCAATGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GAFSLHSKDPVLPFASRPICSIA*RSSMSL Trigger: CAGGCTCATTGAACTTCTCAAGGCAATAGAGCATAT...GGGCCGAGAAGCAAACGGTAAGACTGGATCTTTGGAGTGTAGGCTGAAGGCGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| CDS-3UTR CAA 90 bp | GTGACCTGGGAAATGACAACTTATCAAGCACGCCATAGCATCCATGTCTCTGGATGGTCATTTTGGTCCTaGATCTCCCTGAAAAACCGA | + |
|
Preference number: 5 (lower is better) Translates to: VTWEMTTYQARHSIHVSGWSFWS*ISLKNR Trigger: TCGGTTTTTCAGGGAGATCAAGGACCAAAATGACCA...TCCAGAGACATGGATGCTATGGCGTGCTTGATAAGTTGTCATTTCCCAGGTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| CDS-3UTR CAA 90 bp | GCCAGAGCAGTCCGTACAGTCTCCTTAGGTGTGACCTGGGAAATGACAACTTATGGAGATGTATATTCTTaGGCCTTCGAAATTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ARAVRTVSLGVTWEMTTYGDVYS*AFEILE Trigger: CTCCAGAATTTCGAAGGCCAAAGAATATACATCTCC...ATAAGTTGTCATTTCCCAGGTCACACCTAAGGAGACTGTACGGACTGCTCTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| CDS TCA 90 bp | ACAAAGCAGGACAGTTCCTGTAAGAATGAAACGAATCTCCCCATTTaGATTTGGCAGTCACCTTCCACCATGCTGGAATCTGTAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TKQDSSCKNETNLPI*IWQSPSTMLESVAP Trigger: AGGAGCTACAGATTCCAGCATGGTGGAAGGTGACTGCCAAATTCAAATGGGGAGATTCGTTTCATTCTTACAGGAACTGTCCTGCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| CDS TCA 90 bp | ACAAAGCAGGACAGTTCCTGTAAGAATGAAACGAATCTCCCCATTTaGATTTGGCAGTCACCTTCCACCATGCTGGAATCTCCTTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: TKQDSSCKNETNLPI*IWQSPSTMLESPSP Trigger: TGGTGAAGGAGATTCCAGCATGGTGGAAGGTGACTGCCAAATTCAAATGGGGAGATTCGTTTCATTCTTACAGGAACTGTCCTGCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| CDS-3UTR CAA 90 bp | CTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGAGCTATAGGATCAAGATaGAAATCCCAAACATCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LVTDGCEPPCGCWDLNSGAIGSR*KSQTSP Trigger: TGGCGATGTTTGGGATTTCAATCTTGATCCTATAGC...TCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| CDS-3UTR CAA 90 bp | GCCAGAGCAGTCCGTACAGTCTCCTTAGGTGTGACCTGGGAAATGACAACTTATGTTGTCTCTATAATTTaGGGTCCTATCTTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ARAVRTVSLGVTWEMTTYVVSII*GPILLL Trigger: CAGCAACAAGATAGGACCCAAAATTATAGAGACAAC...ATAAGTTGTCATTTCCCAGGTCACACCTAAGGAGACTGTACGGACTGCTCTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
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| CDS-3UTR CAA 90 bp | CCAAAGACATCAGCAGCTCATGTGAGTCACGTGGAATCCAACAACACAGGAAGGACAGATATTCCTCCATaGAGAGAATCAAACTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PKTSAAHVSHVESNNTGRTDIPP*RESNCC Trigger: ACAGCAGTTTGATTCTCTCAATGGAGGAATATCTGT...CCTTCCTGTGTTGTTGGATTCCACGTGACTCACATGAGCTGCTGATGTCTTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| CDS-3UTR CAA 90 bp | GCCAGAGCAGTCCGTACAGTCTCCTTAGGTGTGACCTGGGAAATGACAACTTATCAAATTCCAACATACTaGTCTCTCTGGTCAATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ARAVRTVSLGVTWEMTTYQIPTY*SLWSIS Trigger: TGAAATTGACCAGAGAGACAAGTATGTTGGAATTTG...ATAAGTTGTCATTTCCCAGGTCACACCTAAGGAGACTGTACGGACTGCTCTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| CDS-3UTR CAA 90 bp | CACAGAGTGCCTTCAAACCTAGTGAAATGTCAAGTGGGTCCCGTCTATGGCTTAAACAATAAGTCGTCGTaGTTTTGTGCTTGGTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: HRVPSNLVKCQVGPVYGLNNKSS*FCAWSI Trigger: AATGGACCAAGCACAAAACAACGACGACTTATTGTT...TAAGCCATAGACGGGACCCACTTGACATTTCACTAGGTTTGAAGGCACTCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| CDS-3UTR CAA 90 bp | GTGACCTGGGAAATGACAACTTATCAAGCACGCCATAGCATCCATGTCTCTGGAACTTTGTTCAGGACCTaGTTTTCAGTCTTTATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VTWEMTTYQARHSIHVSGTLFRT*FSVFMS Trigger: ACTCATAAAGACTGAAAACAAGGTCCTGAACAAAGT...TCCAGAGACATGGATGCTATGGCGTGCTTGATAAGTTGTCATTTCCCAGGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
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| CDS-3UTR CAA 90 bp | GCTTGGACTCGCTCTCTAAGCTCGCTGATAAGATCCAGCTTCTTCATGACTACTACTTTGTTCAGGACCTaGTTTTCAGTCTTTATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: AWTRSLSSLIRSSFFMTTTLFRT*FSVFMS Trigger: ACTCATAAAGACTGAAAACAAGGTCCTGAACAAAGT...AGTAGTCATGAAGAAGCTGGATCTTATCAGCGAGCTTAGAGAGCGAGTCCAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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| CDS-3UTR CAA 90 bp | TCTCTGATACAGATGCTTCATGACTTTCAGGCTCAACTCTTTTTAACTGCGTTAGCTATAGGATCAAGATaGAAATCCCAAACATCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLIQMLHDFQAQLFLTALAIGSR*KSQTSP Trigger: TGGCGATGTTTGGGATTTCAATCTTGATCCTATAGC...TAACGCAGTTAAAAAGAGTTGAGCCTGAAAGTCATGAAGCATCTGTATCAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
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| CDS-3UTR CAA 90 bp | ATGCTTTATTATACGTATTGTATTCTATTTGAGCCAAGGGAAAGGAGAACCCCATCTTCAGCTGCGGTCTaGTCTGCTCTGAAGAATATT | + |
|
Preference number: 5 (lower is better) Translates to: MLYYTYCILFEPRERRTPSSAAV*SALKNI Trigger: AATATTCTTCAGAGCAGACAAGACCGCAGCTGAAGA...TGGGGTTCTCCTTTCCCTTGGCTCAAATAGAATACAATACGTATAATAAAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| CDS-3UTR CAA 90 bp | TCTCTGATACAGATGCTTCATGACTTTCAGGCTCAACTCTTTTTAACTGCGTTATTTAAATGTTTTCATTaGCGTGCCAACGCTCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: SLIQMLHDFQAQLFLTALFKCFH*RANAQC Trigger: GCATTGAGCGTTGGCACGCAAATGAAAACATTTAAA...TAACGCAGTTAAAAAGAGTTGAGCCTGAAAGTCATGAAGCATCTGTATCAGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038388.7 |
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| CDS CAA 72 bp | ACTCCAGTTGTCTCTATAATTTTGGGTCCTATCTTGTaGCTGATGTACAGGGCAGCCAGCTGGTGGATGACA | + |
|
Preference number: 6 (lower is better) Translates to: TPVVSIILGPIL*LMYRAASWWMT Trigger: TGTCATCCACCAGCTGGCTGCCCTGTACATCAGCAACAAGATAGGACCCAAAATTATAGAGACAACTGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
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| CDS TCA 72 bp | GACAGTTCCTGTAAGAATGAAACGAATCTCCCCATTTaGATTTGGCAGTCACCTTCCACCATGCTGGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: DSSCKNETNLPI*IWQSPSTMLES Trigger: AGATTCCAGCATGGTGGAAGGTGACTGCCAAATTCAAATGGGGAGATTCGTTTCATTCTTACAGGAACTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038388.7 ENSMUST00000217842.2 |
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| CDS GCA 72 bp | ATCTCCCCATTTGAATTTGGCAGTCACCTTCCACCATaGTGGAATCTCCTTCACCATAAAACAGAAGACCAT | + |
|
Preference number: 6 (lower is better) Translates to: ISPFEFGSHLPP*WNLLHHKTEDH Trigger: ATGGTCTTCTGTTTTATGGTGAAGGAGATTCCAGCATGGTGGAAGGTGACTGCCAAATTCAAATGGGGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217842.2 |
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