Pregenerated sensors for WASHC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024101Ensembl transcript IDs: ENSMUST00000072383.14, ENSMUST00000116556.4
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACAGGTCCCCCTCCCCGGTTTGCCTCCAAGCCCTCCCTGTGGCTTaGAGTCCCTCCTGTCCTCAGCCACCTCAGCAAACAGCAAGGCAT | + |
|
Preference number: 1 (lower is better) Translates to: HRSPSPVCLQALPVA*SPSCPQPPQQTARH Trigger: ATGCCTTGCTGTTTGCTGAGGTGGCTGAGGACAGGAGGGACTGCAAGCCACAGGGAGGGCTTGGAGGCAAACCGGGGAGGGGGACCTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR GCA 90 bp | CCTGAGATCCGCCCGCCCGGCTCAACAAGGCCTGGATCAATGTCCTaGTGGACTTCAGGCTGGAGACCAGGCTTGGCTGAGGACAGAGCC | + |
|
Preference number: 1 (lower is better) Translates to: PEIRPPGSTRPGSMS*WTSGWRPGLAEDRA Trigger: GGCTCTGTCCTCAGCCAAGCCTGGTCTCCAGCCTGAAGTCCAGCAGGACATTGATCCAGGCCTTGTTGAGCCGGGCGGGCGGATCTCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR CCA 90 bp | GAGATCCGCCCGCCCGGCTCAACAAGGCCTGGATCAATGTCCTGCTaGACTTCAGGCTGGAGACCAGGCTTGGCTGAGGACAGAGCCTGG | + |
|
Preference number: 1 (lower is better) Translates to: EIRPPGSTRPGSMSC*TSGWRPGLAEDRAW Trigger: CCAGGCTCTGTCCTCAGCCAAGCCTGGTCTCCAGCCTGAAGTCCAGCAGGACATTGATCCAGGCCTTGTTGAGCCGGGCGGGCGGATCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR CCA 90 bp | TCCTTCACAGGTCCCCCTCCCCGGTTTGCCTCCAAGCCCTCCCTGTaGCTTGCAGTCCCTCCTGTCCTCAGCCACCTCAGCAAACAGCAA | + |
|
Preference number: 1 (lower is better) Translates to: SFTGPPPRFASKPSL*LAVPPVLSHLSKQQ Trigger: TTGCTGTTTGCTGAGGTGGCTGAGGACAGGAGGGACTGCAAGCCACAGGGAGGGCTTGGAGGCAAACCGGGGAGGGGGACCTGTGAAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR CCA 90 bp | GGCCTGGATCAATGTCCTGCTGGACTTCAGGCTGGAGACCAGGCTTaGCTGAGGACAGAGCCTGGTCCATCACAGGAGGCCTCTGTGGAG | + |
|
Preference number: 1 (lower is better) Translates to: GLDQCPAGLQAGDQA*LRTEPGPSQEASVE Trigger: CTCCACAGAGGCCTCCTGTGATGGACCAGGCTCTGTCCTCAGCCAAGCCTGGTCTCCAGCCTGAAGTCCAGCAGGACATTGATCCAGGCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR CCA 90 bp | CCCGGCTCAACAAGGCCTGGATCAATGTCCTGCTGGACTTCAGGCTaGAGACCAGGCTTGGCTGAGGACAGAGCCTGGTCCATCACAGGA | + |
|
Preference number: 1 (lower is better) Translates to: PGSTRPGSMSCWTSG*RPGLAEDRAWSITG Trigger: TCCTGTGATGGACCAGGCTCTGTCCTCAGCCAAGCCTGGTCTCCAGCCTGAAGTCCAGCAGGACATTGATCCAGGCCTTGTTGAGCCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR TCA 90 bp | GCTCTTCAGCAAAGCCAGCAGATGGCTCATACAGTCCCGACTCCATaGAGAGGAATTAGGCACAGGCCTGGGACACCTGCCCAGCCCCCT | + |
|
Preference number: 1 (lower is better) Translates to: ALQQSQQMAHTVPTP*RGIRHRPGTPAQPP Trigger: AGGGGGCTGGGCAGGTGTCCCAGGCCTGTGCCTAATTCCTCTTCATGGAGTCGGGACTGTATGAGCCATCTGCTGGCTTTGCTGAAGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| 3UTR GCA 90 bp | CAGGGCTGTGTTCACAGGGACCTCACACCAGTTTCAGTTCCTAACTaGAGTTCTGTCCCTCCTGAGTCCTTCACAGGTCCCCCTCCCCGG | + |
|
Preference number: 1 (lower is better) Translates to: QGCVHRDLTPVSVPN*SSVPPESFTGPPPR Trigger: CCGGGGAGGGGGACCTGTGAAGGACTCAGGAGGGACAGAACTGCAGTTAGGAACTGAAACTGGTGTGAGGTCCCTGTGAACACAGCCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR CCA 90 bp | TTCACCCAGAGAGAAGGTCTTCTGACACCCTGTGGCACCCCCGAGTaGTCCCCAAGTGGCCCATATCCCAAAGAGACACCAGGAGCAAAT | + |
|
Preference number: 1 (lower is better) Translates to: FTQREGLLTPCGTPE*SPSGPYPKETPGAN Trigger: ATTTGCTCCTGGTGTCTCTTTGGGATATGGGCCACTTGGGGACCACTCGGGGGTGCCACAGGGTGTCAGAAGACCTTCTCTCTGGGTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR CCA 90 bp | CTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATaGAGGGATGTTCCTTACTGGCTTGCTTCCACTGGCTTCCTCAGC | + |
|
Preference number: 1 (lower is better) Translates to: LELKQVRKQELMQRP*RDVPYWLASTGFLS Trigger: GCTGAGGAAGCCAGTGGAAGCAAGCCAGTAAGGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR TCA 90 bp | CAAAGGATGCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTaGTGCAGAGGCCATGGAGGGATGTTCCTTACTGGCTTGCTTCCA | + |
|
Preference number: 1 (lower is better) Translates to: QRMQDWNSSRSGSRS*CRGHGGMFLTGLLP Trigger: TGGAAGCAAGCCAGTAAGGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGCATCCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR GCA 90 bp | TTGATCCCAGAGAAAGACGTCCATTCCCCCAGTCATCCTGCACCATaGCTCAGCACACCTGGGAAAAAGGACAGCTCCCACTCTCAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: LIPEKDVHSPSHPAP*LSTPGKKDSSHSQK Trigger: CTTCTGAGAGTGGGAGCTGTCCTTTTTCCCAGGTGTGCTGAGGCATGGTGCAGGATGACTGGGGGAATGGACGTCTTTCTCTGGGATCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR GCA 90 bp | ATTTGCCTTGATCCCAGAGAAAGACGTCCATTCCCCCAGTCATCCTaGACCATGCCTCAGCACACCTGGGAAAAAGGACAGCTCCCACTC | + |
|
Preference number: 1 (lower is better) Translates to: ICLDPRERRPFPQSS*TMPQHTWEKGQLPL Trigger: GAGTGGGAGCTGTCCTTTTTCCCAGGTGTGCTGAGGCATGGTGCAGGATGACTGGGGGAATGGACGTCTTTCTCTGGGATCAAGGCAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR CCA 90 bp | AGAAGGTCTTCTGACACCCTGTGGCACCCCCGAGTGGTCCCCAAGTaGCCCATATCCCAAAGAGACACCAGGAGCAAATCTCGATTATCT | + |
|
Preference number: 1 (lower is better) Translates to: RRSSDTLWHPRVVPK*PISQRDTRSKSRLS Trigger: AGATAATCGAGATTTGCTCCTGGTGTCTCTTTGGGATATGGGCCACTTGGGGACCACTCGGGGGTGCCACAGGGTGTCAGAAGACCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR GCA 90 bp | GGAGGGATGTTCCTTACTGGCTTGCTTCCACTGGCTTCCTCAGCTTaGTTTCTTATAGAACCCAGGACCACCAGCCCAGAGATGGTACCA | + |
|
Preference number: 1 (lower is better) Translates to: GGMFLTGLLPLASSA*FLIEPRTTSPEMVP Trigger: TGGTACCATCTCTGGGCTGGTGGTCCTGGGTTCTATAAGAAAGCAAGCTGAGGAAGCCAGTGGAAGCAAGCCAGTAAGGAACATCCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR TCA 90 bp | TGGCCCATATCCCAAAGAGACACCAGGAGCAAATCTCGATTATCTTaGGGAAACTGCAACTACCCAGGGCAGTTCAGCCTGAGATCCGCC | + |
|
Preference number: 1 (lower is better) Translates to: WPISQRDTRSKSRLS*GNCNYPGQFSLRSA Trigger: GGCGGATCTCAGGCTGAACTGCCCTGGGTAGTTGCAGTTTCCTCAAGATAATCGAGATTTGCTCCTGGTGTCTCTTTGGGATATGGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR TCA 90 bp | TTTCCACACCCAGTGCAGGGAGAGCATCCTTGGTCTTGCCTTCTCTaGGTGTACAAGGTTCAGTCTGCCTTTCCCTCCCAACAAACCCTT | + |
|
Preference number: 1 (lower is better) Translates to: FPHPVQGEHPWSCLL*VYKVQSAFPSQQTL Trigger: AAGGGTTTGTTGGGAGGGAAAGGCAGACTGAACCTTGTACACTCAGAGAAGGCAAGACCAAGGATGCTCTCCCTGCACTGGGTGTGGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR TCA 90 bp | CCACCAGCCCAGAGATGGTACCACCCACAAGGGGCCTTTCCTCCTTaGTCACTAATTGAGAAAATGCCTTACAGCTGGATCTCACGGAGA | + |
|
Preference number: 1 (lower is better) Translates to: PPAQRWYHPQGAFPP*SLIEKMPYSWISRR Trigger: TCTCCGTGAGATCCAGCTGTAAGGCATTTTCTCAATTAGTGATCAAGGAGGAAAGGCCCCTTGTGGGTGGTACCATCTCTGGGCTGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR CCA 90 bp | CCATGTCAAGTAGACACACAAAATCAGCCAGTACACCTGCCATTCTaGTTTCCACACCCAGTGCAGGGAGAGCATCCTTGGTCTTGCCTT | + |
|
Preference number: 1 (lower is better) Translates to: PCQVDTQNQPVHLPF*FPHPVQGEHPWSCL Trigger: AAGGCAAGACCAAGGATGCTCTCCCTGCACTGGGTGTGGAAACCAGAATGGCAGGTGTACTGGCTGATTTTGTGTGTCTACTTGACATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR CCA 90 bp | AGCCGCAGCCCGCATGGCTACTCTTCATTTATTAAAGGCCACTGTTaGCTTGGGTTCAGGTCTACAGTTACTTTCTTTATTCCGCCGTGT | + |
|
Preference number: 1 (lower is better) Translates to: SRSPHGYSSFIKGHC*LGFRSTVTFFIPPC Trigger: ACACGGCGGAATAAAGAAAGTAACTGTAGACCTGAACCCAAGCCAACAGTGGCCTTTAATAAATGAAGAGTAGCCATGCGGGCTGCGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| 3UTR TCA 90 bp | TACTTTCTTTATTCCGCCGTGTTGCTGTTTTCTCTCAGGATCCTTTaGAGGAAGAAGCTCTTCAGCAAAGCCAGCAGATGGCTCATACAG | + |
|
Preference number: 1 (lower is better) Translates to: YFLYSAVLLFSLRIL*RKKLFSKASRWLIQ Trigger: CTGTATGAGCCATCTGCTGGCTTTGCTGAAGAGCTTCTTCCTTCAAAGGATCCTGAGAGAAAACAGCAACACGGCGGAATAAAGAAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| 3UTR GCA 90 bp | TGGCTTGGGTTCAGGTCTACAGTTACTTTCTTTATTCCGCCGTGTTaGTGTTTTCTCTCAGGATCCTTTGAAGGAAGAAGCTCTTCAGCA | + |
|
Preference number: 1 (lower is better) Translates to: WLGFRSTVTFFIPPC*CFLSGSFEGRSSSA Trigger: TGCTGAAGAGCTTCTTCCTTCAAAGGATCCTGAGAGAAAACAGCAACACGGCGGAATAAAGAAAGTAACTGTAGACCTGAACCCAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| 3UTR-3UTR GCA 90 bp | CACCCAGAGAGAAGGTCTTCTGACACCCTGTGGCACCCCCGAGTGGTCCCCAAGCAGGCCTGGGACACCTaGCCAGCCCCCTGCACCTCC | + |
|
Preference number: 2 (lower is better) Translates to: HPERRSSDTLWHPRVVPKQAWDT*PAPCTS Trigger: GGAGGTGCAGGGGGCTGGGCAGGTGTCCCAGGCCTG...CTTGGGGACCACTCGGGGGTGCCACAGGGTGTCAGAAGACCTTCTCTCTGGGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR-3UTR TCA 90 bp | CTTCACAGGTCCCCCTCCCCGGTTTGCCTCCAAGCCCTCCCTGTGGCTTGCAGTTTGGGCAACAGGCCCTaGAAGGCCCCAACTGGCCGA | + |
|
Preference number: 2 (lower is better) Translates to: LHRSPSPVCLQALPVACSLGNRP*KAPTGR Trigger: TCGGCCAGTTGGGGCCTTTCAGGGCCTGTTGCCCAA...ACTGCAAGCCACAGGGAGGGCTTGGAGGCAAACCGGGGAGGGGGACCTGTGAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR CAA 90 bp | TCACAGGTCCCCCTCCCCGGTTTGCCTCCAAGCCCTCCCTGTGGCTaGCAGTCCCTCCTGTCCTCAGCCACCTCAGCAAACAGCAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SQVPLPGLPPSPPCG*QSLLSSATSANSKA Trigger: TGCCTTGCTGTTTGCTGAGGTGGCTGAGGACAGGAGGGACTGCAAGCCACAGGGAGGGCTTGGAGGCAAACCGGGGAGGGGGACCTGTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR-3UTR GCA 90 bp | CTCTTCAGCAAAGCCAGCAGATGGCTCATACAGTCCCGACTCCATGAAGAGGAACAGGCCTGGGACACCTaGCCAGCCCCCTGCACCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LFSKASRWLIQSRLHEEEQAWDT*PAPCTS Trigger: GGAGGTGCAGGGGGCTGGGCAGGTGTCCCAGGCCTG...TTCCTCTTCATGGAGTCGGGACTGTATGAGCCATCTGCTGGCTTTGCTGAAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| 3UTR-3UTR CCA 90 bp | CACCCAGAGAGAAGGTCTTCTGACACCCTGTGGCACCCCCGAGTGGTCCCCAAGCACAGGAGGCCTCTGTaGAGGCAACATCTAAACCGC | + |
|
Preference number: 2 (lower is better) Translates to: HPERRSSDTLWHPRVVPKHRRPL*RQHLNR Trigger: GCGGTTTAGATGTTGCCTCCACAGAGGCCTCCTGTG...CTTGGGGACCACTCGGGGGTGCCACAGGGTGTCAGAAGACCTTCTCTCTGGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR-3UTR TCA 90 bp | AGCTCTTCAGCAAAGCCAGCAGATGGCTCATACAGTCCCGACTCCATGAAGAGGTTGGGCAACAGGCCCTaGAAGGCCCCAACTGGCCGA | + |
|
Preference number: 2 (lower is better) Translates to: SSSAKPADGSYSPDSMKRLGNRP*KAPTGR Trigger: TCGGCCAGTTGGGGCCTTTCAGGGCCTGTTGCCCAA...CCTCTTCATGGAGTCGGGACTGTATGAGCCATCTGCTGGCTTTGCTGAAGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| 3UTR-3UTR GCA 90 bp | CTCTTCAGCAAAGCCAGCAGATGGCTCATACAGTCCCGACTCCATGAAGAGGAAACCTGCCCAGCCCCCTaGACCTCCTTGGGCAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: LFSKASRWLIQSRLHEEETCPAP*TSLGNR Trigger: CCTGTTGCCCAAGGAGGTGCAGGGGGCTGGGCAGGT...TTCCTCTTCATGGAGTCGGGACTGTATGAGCCATCTGCTGGCTTTGCTGAAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| 3UTR-3UTR GCA 90 bp | AAAGGACAGCTCCCACTCTCAGAAGCCGCAGCCCGCATGGCTACTCTTCATTTACCCTGCCAGCTGCTCTaGCATGTGGGAGAATGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: KGQLPLSEAAARMATLHLPCQLL*HVGEWP Trigger: TGGCCATTCTCCCACATGGCAGAGCAGCTGGCAGGG...TAAATGAAGAGTAGCCATGCGGGCTGCGGCTTCTGAGAGTGGGAGCTGTCCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR-3UTR GCA 90 bp | AAGAAGCTCTTCAGCAAAGCCAGCAGATGGCTCATACAGTCCCGACTCCATGAATGGCCGAGGAGCCCCTaGCAGCTGCTCTGCCATGTG | + |
|
Preference number: 2 (lower is better) Translates to: KKLFSKASRWLIQSRLHEWPRSP*QLLCHV Trigger: CACATGGCAGAGCAGCTGGCAGGGGCTCCTCGGCCA...TTCATGGAGTCGGGACTGTATGAGCCATCTGCTGGCTTTGCTGAAGAGCTTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| 3UTR-3UTR GCA 90 bp | CTCTTCAGCAAAGCCAGCAGATGGCTCATACAGTCCCGACTCCATGAAGAGGAACCCTGCCAGCTGCTCTaGCATGTGGGAGAATGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: LFSKASRWLIQSRLHEEEPCQLL*HVGEWP Trigger: TGGCCATTCTCCCACATGGCAGAGCAGCTGGCAGGG...TTCCTCTTCATGGAGTCGGGACTGTATGAGCCATCTGCTGGCTTTGCTGAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| 3UTR-3UTR GCA 90 bp | CTCTTCAGCAAAGCCAGCAGATGGCTCATACAGTCCCGACTCCATGAAGAGGAAGGAGCCCCTGCCAGCTaGTCTGCCATGTGGGAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: LFSKASRWLIQSRLHEEEGAPAS*SAMWEN Trigger: ATTCTCCCACATGGCAGAGCAGCTGGCAGGGGCTCC...TTCCTCTTCATGGAGTCGGGACTGTATGAGCCATCTGCTGGCTTTGCTGAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| 3UTR-3UTR GCA 90 bp | AGACCAGGCTTGGCTGAGGACAGAGCCTGGTCCATCACAGGAGGCCTCTGTGGAGACCTCATCCCCATTTaGCTTGATCCCAGAGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: RPGLAEDRAWSITGGLCGDLIPI*LDPRER Trigger: TCTTTCTCTGGGATCAAGGCAAATGGGGATGAGGTC...TCCACAGAGGCCTCCTGTGATGGACCAGGCTCTGTCCTCAGCCAAGCCTGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR-3UTR CCA 90 bp | CACCCAGAGAGAAGGTCTTCTGACACCCTGTGGCACCCCCGAGTGGTCCCCAAGATTAAAGGCCACTGTTaGCTTGGGTTCAGGTCTACA | + |
|
Preference number: 2 (lower is better) Translates to: HPERRSSDTLWHPRVVPKIKGHC*LGFRST Trigger: TGTAGACCTGAACCCAAGCCAACAGTGGCCTTTAAT...CTTGGGGACCACTCGGGGGTGCCACAGGGTGTCAGAAGACCTTCTCTCTGGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR CAA 90 bp | GCCATTCTGGTTTCCACACCCAGTGCAGGGAGAGCATCCTTGGTCTaGCCTTCTCTGAGTGTACAAGGTTCAGTCTGCCTTTCCCTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: AILVSTPSAGRASLV*PSLSVQGSVCLSLP Trigger: TGGGAGGGAAAGGCAGACTGAACCTTGTACACTCAGAGAAGGCAAGACCAAGGATGCTCTCCCTGCACTGGGTGTGGAAACCAGAATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR-3UTR GCA 90 bp | TTTCTTATAGAACCCAGGACCACCAGCCCAGAGATGGTACCACCCACAAGGGGCAGTCATCCTGCACCATaGCTCAGCACACCTGGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: FLIEPRTTSPEMVPPTRGSHPAP*LSTPGK Trigger: TTTCCCAGGTGTGCTGAGGCATGGTGCAGGATGACT...GCCCCTTGTGGGTGGTACCATCTCTGGGCTGGTGGTCCTGGGTTCTATAAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGGGCTGTGTTCACAGGGACCTCACACCAGTTTCAGTTCCTAACTGCAGTTCCTCCCTCTGTCCCCTaGGGACCTCATCCCCATTTG | + |
|
Preference number: 2 (lower is better) Translates to: FRAVFTGTSHQFQFLTAVPPSVP*GPHPHL Trigger: CAAATGGGGATGAGGTCCGCAGGGGACAGAGGGAGG...AACTGCAGTTAGGAACTGAAACTGGTGTGAGGTCCCTGTGAACACAGCCCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR-3UTR GCA 90 bp | CCAAAGAGACACCAGGAGCAAATCTCGATTATCTTGAGGAAACTGCAACTACCCTCCCCCTCCCCGGTTTaGCTCCAAGCCCTCCCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: PKRHQEQISIILRKLQLPSPSPV*LQALPV Trigger: CACAGGGAGGGCTTGGAGGCAAACCGGGGAGGGGGA...GGGTAGTTGCAGTTTCCTCAAGATAATCGAGATTTGCTCCTGGTGTCTCTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR CAA 90 bp | TGGAGGGATGTTCCTTACTGGCTTGCTTCCACTGGCTTCCTCAGCTaGCTTTCTTATAGAACCCAGGACCACCAGCCCAGAGATGGTACC | + |
|
Preference number: 2 (lower is better) Translates to: WRDVPYWLASTGFLS*LSYRTQDHQPRDGT Trigger: GGTACCATCTCTGGGCTGGTGGTCCTGGGTTCTATAAGAAAGCAAGCTGAGGAAGCCAGTGGAAGCAAGCCAGTAAGGAACATCCCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR-3UTR GCA 90 bp | CCAAGTGGCCCATATCCCAAAGAGACACCAGGAGCAAATCTCGATTATCTTGAGGGAGCCCCTGCCAGCTaGTCTGCCATGTGGGAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: PSGPYPKETPGANLDYLEGAPAS*SAMWEN Trigger: ATTCTCCCACATGGCAGAGCAGCTGGCAGGGGCTCC...CTCAAGATAATCGAGATTTGCTCCTGGTGTCTCTTTGGGATATGGGCCACTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR-3UTR CCA 90 bp | AGCTCTTCAGCAAAGCCAGCAGATGGCTCATACAGTCCCGACTCCATGAAGAGGAGCTGCTCTGCCATGTaGGAGAATGGCCAAAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: SSSAKPADGSYSPDSMKRSCSAM*ENGQST Trigger: AGTGCTTTGGCCATTCTCCCACATGGCAGAGCAGCT...CCTCTTCATGGAGTCGGGACTGTATGAGCCATCTGCTGGCTTTGCTGAAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| 3UTR CAA 90 bp | GTGGCCCATATCCCAAAGAGACACCAGGAGCAAATCTCGATTATCTaGAGGAAACTGCAACTACCCAGGGCAGTTCAGCCTGAGATCCGC | + |
|
Preference number: 2 (lower is better) Translates to: VAHIPKRHQEQISII*RKLQLPRAVQPEIR Trigger: GCGGATCTCAGGCTGAACTGCCCTGGGTAGTTGCAGTTTCCTCAAGATAATCGAGATTTGCTCCTGGTGTCTCTTTGGGATATGGGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR-3UTR GCA 90 bp | AGACACCAGGAGCAAATCTCGATTATCTTGAGGAAACTGCAACTACCCAGGGCATTCCCCCAGTCATCCTaGACCATGCCTCAGCACACC | + |
|
Preference number: 2 (lower is better) Translates to: RHQEQISIILRKLQLPRAFPQSS*TMPQHT Trigger: GGTGTGCTGAGGCATGGTGCAGGATGACTGGGGGAA...TGCCCTGGGTAGTTGCAGTTTCCTCAAGATAATCGAGATTTGCTCCTGGTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR-3UTR CCA 90 bp | CCAAAGAGACACCAGGAGCAAATCTCGATTATCTTGAGGAAACTGCAACTACCCAGCTGCTCTGCCATGTaGGAGAATGGCCAAAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: PKRHQEQISIILRKLQLPSCSAM*ENGQST Trigger: AGTGCTTTGGCCATTCTCCCACATGGCAGAGCAGCT...GGGTAGTTGCAGTTTCCTCAAGATAATCGAGATTTGCTCCTGGTGTCTCTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR-3UTR GCA 90 bp | AGACACCAGGAGCAAATCTCGATTATCTTGAGGAAACTGCAACTACCCAGGGCATTTATTCCGCCGTGTTaGTGTTTTCTCTCAGGATCC | + |
|
Preference number: 2 (lower is better) Translates to: RHQEQISIILRKLQLPRAFIPPC*CFLSGS Trigger: GGATCCTGAGAGAAAACAGCAACACGGCGGAATAAA...TGCCCTGGGTAGTTGCAGTTTCCTCAAGATAATCGAGATTTGCTCCTGGTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR CAA 90 bp | TTACTTTCTTTATTCCGCCGTGTTGCTGTTTTCTCTCAGGATCCTTaGAAGGAAGAAGCTCTTCAGCAAAGCCAGCAGATGGCTCATACA | + |
|
Preference number: 2 (lower is better) Translates to: LLSLFRRVAVFSQDP*KEEALQQSQQMAHT Trigger: TGTATGAGCCATCTGCTGGCTTTGCTGAAGAGCTTCTTCCTTCAAAGGATCCTGAGAGAAAACAGCAACACGGCGGAATAAAGAAAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| 3UTR CCA 72 bp | GGTCCCCCTCCCCGGTTTGCCTCCAAGCCCTCCCTGTaGCTTGCAGTCCCTCCTGTCCTCAGCCACCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GPPPRFASKPSL*LAVPPVLSHLS Trigger: GCTGAGGTGGCTGAGGACAGGAGGGACTGCAAGCCACAGGGAGGGCTTGGAGGCAAACCGGGGAGGGGGACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR GCA 72 bp | CAGGCCCTGAAAGGCCCCAACTGGCCGAGGAGCCCCTaGCAGCTGCTCTGCCATGTGGGAGAATGGCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QALKGPNWPRSP*QLLCHVGEWPK Trigger: CTTTGGCCATTCTCCCACATGGCAGAGCAGCTGGCAGGGGCTCCTCGGCCAGTTGGGGCCTTTCAGGGCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| 3UTR GCA 72 bp | CCCTCCCCGGTTTGCCTCCAAGCCCTCCCTGTGGCTTaGAGTCCCTCCTGTCCTCAGCCACCTCAGCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: PSPVCLQALPVA*SPSCPQPPQQT Trigger: TGTTTGCTGAGGTGGCTGAGGACAGGAGGGACTGCAAGCCACAGGGAGGGCTTGGAGGCAAACCGGGGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR GCA 72 bp | CGCCCGCCCGGCTCAACAAGGCCTGGATCAATGTCCTaGTGGACTTCAGGCTGGAGACCAGGCTTGGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RPPGSTRPGSMS*WTSGWRPGLAE Trigger: CTCAGCCAAGCCTGGTCTCCAGCCTGAAGTCCAGCAGGACATTGATCCAGGCCTTGTTGAGCCGGGCGGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR CCA 72 bp | CCGCCCGGCTCAACAAGGCCTGGATCAATGTCCTGCTaGACTTCAGGCTGGAGACCAGGCTTGGCTGAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: PPGSTRPGSMSC*TSGWRPGLAED Trigger: GTCCTCAGCCAAGCCTGGTCTCCAGCCTGAAGTCCAGCAGGACATTGATCCAGGCCTTGTTGAGCCGGGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR TCA 72 bp | CTTGAGGAAACTGCAACTACCCAGGGCAGTTCAGCCTaGGATCCGCCCGCCCGGCTCAACAAGGCCTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: LEETATTQGSSA*DPPARLNKAWI Trigger: GATCCAGGCCTTGTTGAGCCGGGCGGGCGGATCTCAGGCTGAACTGCCCTGGGTAGTTGCAGTTTCCTCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR TCA 72 bp | CCTGAATGTGCAGTTTCACCCAGAGAGAAGGTCTTCTaGCACCCTGTGGCACCCCCGAGTGGTCCCCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PECAVSPREKVF*HPVAPPSGPQV Trigger: CACTTGGGGACCACTCGGGGGTGCCACAGGGTGTCAGAAGACCTTCTCTCTGGGTGAAACTGCACATTCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR CCA 72 bp | TCTGACACCCTGTGGCACCCCCGAGTGGTCCCCAAGTaGCCCATATCCCAAAGAGACACCAGGAGCAAATCT | + |
|
Preference number: 3 (lower is better) Translates to: SDTLWHPRVVPK*PISQRDTRSKS Trigger: AGATTTGCTCCTGGTGTCTCTTTGGGATATGGGCCACTTGGGGACCACTCGGGGGTGCCACAGGGTGTCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR TCA 72 bp | CAAAGCCAGCAGATGGCTCATACAGTCCCGACTCCATaGAGAGGAATTAGGCACAGGCCTGGGACACCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: QSQQMAHTVPTP*RGIRHRPGTPA Trigger: GGCAGGTGTCCCAGGCCTGTGCCTAATTCCTCTTCATGGAGTCGGGACTGTATGAGCCATCTGCTGGCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| 3UTR CCA 72 bp | AAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATaGAGGGATGTTCCTTACTGGCTTGCTTCCACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: KQVRKQELMQRP*RDVPYWLASTG Trigger: GCCAGTGGAAGCAAGCCAGTAAGGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR-3UTR CAA 90 bp | CTAACTGCAGTTCTGTCCCTCCTGAGTCCTTCACAGGTCCCCCTCCCCGGTTTGTCATCCCCATTTGCCTaGATCCCAGAGAAAGACGTC | + |
|
Preference number: 3 (lower is better) Translates to: LTAVLSLLSPSQVPLPGLSSPFA*IPEKDV Trigger: GACGTCTTTCTCTGGGATCAAGGCAAATGGGGATGA...CAAACCGGGGAGGGGGACCTGTGAAGGACTCAGGAGGGACAGAACTGCAGTTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR GCA 72 bp | GATCCCAGAGAAAGACGTCCATTCCCCCAGTCATCCTaGACCATGCCTCAGCACACCTGGGAAAAAGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: DPRERRPFPQSS*TMPQHTWEKGQ Trigger: CTGTCCTTTTTCCCAGGTGTGCTGAGGCATGGTGCAGGATGACTGGGGGAATGGACGTCTTTCTCTGGGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR TCA 72 bp | CCAGTGCAGGGAGAGCATCCTTGGTCTTGCCTTCTCTaGGTGTACAAGGTTCAGTCTGCCTTTCCCTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: PVQGEHPWSCLL*VYKVQSAFPSQ Trigger: TTGGGAGGGAAAGGCAGACTGAACCTTGTACACTCAGAGAAGGCAAGACCAAGGATGCTCTCCCTGCACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR GCA 72 bp | GTTCACAGGGACCTCACACCAGTTTCAGTTCCTAACTaGAGTTCTGTCCCTCCTGAGTCCTTCACAGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: VHRDLTPVSVPN*SSVPPESFTGP Trigger: GGGACCTGTGAAGGACTCAGGAGGGACAGAACTGCAGTTAGGAACTGAAACTGGTGTGAGGTCCCTGTGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR GCA 72 bp | TTCCTTACTGGCTTGCTTCCACTGGCTTCCTCAGCTTaGTTTCTTATAGAACCCAGGACCACCAGCCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: FLTGLLPLASSA*FLIEPRTTSPE Trigger: CTCTGGGCTGGTGGTCCTGGGTTCTATAAGAAAGCAAGCTGAGGAAGCCAGTGGAAGCAAGCCAGTAAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR TCA 72 bp | CCTTACAGCTGGATCTCACGGAGACACTTCCCCAACTaGAGCTCGTTTCTCTGTGATAACTCCAGCCATGTC | + |
|
Preference number: 3 (lower is better) Translates to: PYSWISRRHFPN*SSFLCDNSSHV Trigger: GACATGGCTGGAGTTATCACAGAGAAACGAGCTTCAGTTGGGGAAGTGTCTCCGTGAGATCCAGCTGTAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR TCA 72 bp | TCCCAAAGAGACACCAGGAGCAAATCTCGATTATCTTaGGGAAACTGCAACTACCCAGGGCAGTTCAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SQRDTRSKSRLS*GNCNYPGQFSL Trigger: CAGGCTGAACTGCCCTGGGTAGTTGCAGTTTCCTCAAGATAATCGAGATTTGCTCCTGGTGTCTCTTTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR TCA 72 bp | GCCTTTCCCTCCCAACAAACCCTTGGTAAACGTTCCTaGATGTGCAGTTTCACCCAGAGAGAAGGTCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AFPSQQTLGKRS*MCSFTQREGLL Trigger: CAGAAGACCTTCTCTCTGGGTGAAACTGCACATTCAGGAACGTTTACCAAGGGTTTGTTGGGAGGGAAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR TCA 72 bp | TATTCCGCCGTGTTGCTGTTTTCTCTCAGGATCCTTTaGAGGAAGAAGCTCTTCAGCAAAGCCAGCAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: YSAVLLFSLRIL*RKKLFSKASRW Trigger: CCATCTGCTGGCTTTGCTGAAGAGCTTCTTCCTTCAAAGGATCCTGAGAGAAAACAGCAACACGGCGGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| 3UTR TCA 72 bp | CAGAGATGGTACCACCCACAAGGGGCCTTTCCTCCTTaGTCACTAATTGAGAAAATGCCTTACAGCTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: QRWYHPQGAFPP*SLIEKMPYSWI Trigger: GATCCAGCTGTAAGGCATTTTCTCAATTAGTGATCAAGGAGGAAAGGCCCCTTGTGGGTGGTACCATCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR-3UTR CAA 90 bp | CCAAGTGGCCCATATCCCAAAGAGACACCAGGAGCAAATCTCGATTATCTTGAGCTTTATTCCGCCGTGTaGCTGTTTTCTCTCAGGATC | + |
|
Preference number: 3 (lower is better) Translates to: PSGPYPKETPGANLDYLELYSAV*LFSLRI Trigger: GATCCTGAGAGAAAACAGCAACACGGCGGAATAAAG...CTCAAGATAATCGAGATTTGCTCCTGGTGTCTCTTTGGGATATGGGCCACTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR TCA 72 bp | AAGGGTTTATTCAGTTTACACTTTCCACATTGCTGTTaGTCACCAAAGGATGCAGGACTGGAACTCAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KGLFSLHFPHCC*SPKDAGLELKQ Trigger: CTGCTTGAGTTCCAGTCCTGCATCCTTTGGTGATCAACAGCAATGTGGAAAGTGTAAACTGAATAAACCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR CAA 72 bp | CCCCTCCCCGGTTTGCCTCCAAGCCCTCCCTGTGGCTaGCAGTCCCTCCTGTCCTCAGCCACCTCAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PLPGLPPSPPCG*QSLLSSATSAN Trigger: GTTTGCTGAGGTGGCTGAGGACAGGAGGGACTGCAAGCCACAGGGAGGGCTTGGAGGCAAACCGGGGAGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR CAA 72 bp | TCCCTCCTGAGTCCTTCACAGGTCCCCCTCCCCGGTTaGCCTCCAAGCCCTCCCTGTGGCTTGCAGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLLSPSQVPLPG*PPSPPCGLQSL Trigger: GAGGGACTGCAAGCCACAGGGAGGGCTTGGAGGCAAACCGGGGAGGGGGACCTGTGAAGGACTCAGGAGGGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR GCA 90 bp | GCAACAGGCCCTGAAAGGCCCCAACTGGCCGAGGAGCCCCTGCCAGCTGCTCTGTGGCTGGAGAGGTTCTaGCACCTCTGTGTGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ATGPERPQLAEEPLPAALWLERF*HLCVEG Trigger: GCCTTCCACACAGAGGTGGCAGAACCTCTCCAGCCA...CAGAGCAGCTGGCAGGGGCTCCTCGGCCAGTTGGGGCCTTTCAGGGCCTGTTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR GCA 90 bp | GCAACAGGCCCTGAAAGGCCCCAACTGGCCGAGGAGCCCCTGCCAGCTGCTCTGCTGGCCAGCAGCAGTTaGCATGTCAGGGAACATCGG | + |
|
Preference number: 4 (lower is better) Translates to: ATGPERPQLAEEPLPAALLASSS*HVREHR Trigger: CCGATGTTCCCTGACATGGCAACTGCTGCTGGCCAG...CAGAGCAGCTGGCAGGGGCTCCTCGGCCAGTTGGGGCCTTTCAGGGCCTGTTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR CCA 90 bp | CTGTCCCTCCTGAGTCCTTCACAGGTCCCCCTCCCCGGTTTGCCTCCAAGCCCTGCATCTGCCACTTGCTaGATTGCCTCCTCTCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLLSPSQVPLPGLPPSPASATC*IASSRR Trigger: GCGACGAGAGGAGGCAATCCAGCAAGTGGCAGATGC...AGGGCTTGGAGGCAAACCGGGGAGGGGGACCTGTGAAGGACTCAGGAGGGACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR GCA 90 bp | GCAACAGGCCCTGAAAGGCCCCAACTGGCCGAGGAGCCCCTGCCAGCTGCTCTGTATTTCAGCTTCTCCTaGAGAGCCCGCTCATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ATGPERPQLAEEPLPAALYFSFS*RARSSS Trigger: ACTGGATGAGCGGGCTCTGCAGGAGAAGCTGAAATA...CAGAGCAGCTGGCAGGGGCTCCTCGGCCAGTTGGGGCCTTTCAGGGCCTGTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR CCA 90 bp | AGACCAGGCTTGGCTGAGGACAGAGCCTGGTCCATCACAGGAGGCCTCTGTGGACCCCACCTTGGCTCGTaGCTCTCACTTGCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RPGLAEDRAWSITGGLCGPHLGS*LSLAPA Trigger: AGCAGGAGCAAGTGAGAGCCACGAGCCAAGGTGGGG...TCCACAGAGGCCTCCTGTGATGGACCAGGCTCTGTCCTCAGCCAAGCCTGGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR GCA 90 bp | CACCCAGAGAGAAGGTCTTCTGACACCCTGTGGCACCCCCGAGTGGTCCCCAAGGTACTGCAGGGCATCTaGCACTTGCTGGATTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HPERRSSDTLWHPRVVPKVLQGI*HLLDCL Trigger: GAGGCAATCCAGCAAGTGGCAGATGCCCTGCAGTAC...CTTGGGGACCACTCGGGGGTGCCACAGGGTGTCAGAAGACCTTCTCTCTGGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR CCA 90 bp | CACCCAGAGAGAAGGTCTTCTGACACCCTGTGGCACCCCCGAGTGGTCCCCAAGGAAGGCAGGCAACTCTaGGATAGCACCAGGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HPERRSSDTLWHPRVVPKEGRQL*DSTRSR Trigger: TCTGCTCCTGGTGCTATCCCAGAGTTGCCTGCCTTC...CTTGGGGACCACTCGGGGGTGCCACAGGGTGTCAGAAGACCTTCTCTCTGGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR TCA 90 bp | AACAAGGCCTGGATCAATGTCCTGCTGGACTTCAGGCTGGAGACCAGGCTTGGCGCAGGTCGGGCTGGATaGGGGGCACTGCATAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NKAWINVLLDFRLETRLGAGRAG*GALHKA Trigger: AGCTTTATGCAGTGCCCCTCATCCAGCCCGACCTGC...GCCAAGCCTGGTCTCCAGCCTGAAGTCCAGCAGGACATTGATCCAGGCCTTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR GCA 90 bp | CTTCACAGGTCCCCCTCCCCGGTTTGCCTCCAAGCCCTCCCTGTGGCTTGCAGTATGTTCTGTAGGTACTaGAGGGCATCTGCCACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LHRSPSPVCLQALPVACSMFCRY*RASATC Trigger: GCAAGTGGCAGATGCCCTGCAGTACCTACAGAACAT...ACTGCAAGCCACAGGGAGGGCTTGGAGGCAAACCGGGGAGGGGGACCTGTGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR GCA 90 bp | CTTCACAGGTCCCCCTCCCCGGTTTGCCTCCAAGCCCTCCCTGTGGCTTGCAGTATTTCTCCTCCTCTGTaGCCAGCATCGTGTGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LHRSPSPVCLQALPVACSISPPL*PASCAF Trigger: AAACGCACACGATGCTGGGCACAGAGGAGGAGAAAT...ACTGCAAGCCACAGGGAGGGCTTGGAGGCAAACCGGGGAGGGGGACCTGTGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR GCA 90 bp | CCCCCGAGTGGTCCCCAAGTGGCCCATATCCCAAAGAGACACCAGGAGCAAATCTGGCTGGAGAGGTTCTaGCACCTCTGTGTGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPSGPQVAHIPKRHQEQIWLERF*HLCVEG Trigger: GCCTTCCACACAGAGGTGGCAGAACCTCTCCAGCCA...GATTTGCTCCTGGTGTCTCTTTGGGATATGGGCCACTTGGGGACCACTCGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR GCA 90 bp | AACAAGGCCTGGATCAATGTCCTGCTGGACTTCAGGCTGGAGACCAGGCTTGGCTGGGGTACTGACCAATaGTGTGGGAGCTGGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKAWINVLLDFRLETRLGWGTDQ*CGSWGR Trigger: CCTCCCCCAGCTCCCACAGCATTGGTCAGTACCCCA...GCCAAGCCTGGTCTCCAGCCTGAAGTCCAGCAGGACATTGATCCAGGCCTTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR CCA 90 bp | GAAAGACGTCCATTCCCCCAGTCATCCTGCACCATGCCTCAGCACACCTGGGAATCTTCCCTGGCAACCTaGCCAGCAGCAGTTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: ERRPFPQSSCTMPQHTWESSLAT*PAAVAM Trigger: CATGGCAACTGCTGCTGGCCAGGTTGCCAGGGAAGA...TTCCCAGGTGTGCTGAGGCATGGTGCAGGATGACTGGGGGAATGGACGTCTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR TCA 90 bp | AAGGAAGAAGCTCTTCAGCAAAGCCAGCAGATGGCTCATACAGTCCCGACTCCATCCTTAGGGGCTCCCTaGACAGAGGCTGTGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KEEALQQSQQMAHTVPTPSLGAP*TEAVWA Trigger: GGCCCACACAGCCTCTGTTCAGGGAGCCCCTAAGGA...TGGAGTCGGGACTGTATGAGCCATCTGCTGGCTTTGCTGAAGAGCTTCTTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR GCA 90 bp | AGACCAGGCTTGGCTGAGGACAGAGCCTGGTCCATCACAGGAGGCCTCTGTGGAGTGCCCAGCATCGTGTaGGTTTTTGTTACTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RPGLAEDRAWSITGGLCGVPSIV*VFVTAP Trigger: TGGTGCAGTAACAAAAACGCACACGATGCTGGGCAC...TCCACAGAGGCCTCCTGTGATGGACCAGGCTCTGTCCTCAGCCAAGCCTGGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR CCA 90 bp | CCCCCGAGTGGTCCCCAAGTGGCCCATATCCCAAAGAGACACCAGGAGCAAATCTTCTCTAGCTCTGGCTaGAGAGGTTCTGCCACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPSGPQVAHIPKRHQEQIFSSSG*RGSATS Trigger: AGAGGTGGCAGAACCTCTCCAGCCAGAGCTAGAGAA...GATTTGCTCCTGGTGTCTCTTTGGGATATGGGCCACTTGGGGACCACTCGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGAAGCTCTTCAGCAAAGCCAGCAGATGGCTCATACAGTCCCGACTCCACCCCACCTTGGCTCGTaGCTCTCACTTGCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KEEALQQSQQMAHTVPTPPHLGS*LSLAPA Trigger: AGCAGGAGCAAGTGAGAGCCACGAGCCAAGGTGGGG...TGGAGTCGGGACTGTATGAGCCATCTGCTGGCTTTGCTGAAGAGCTTCTTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR TCA 90 bp | CAGGAGCAAATCTCGATTATCTTGAGGAAACTGCAACTACCCAGGGCAGTTCAGTCCTTAGGGGCTCCCTaGACAGAGGCTGTGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QEQISIILRKLQLPRAVQSLGAP*TEAVWA Trigger: GGCCCACACAGCCTCTGTTCAGGGAGCCCCTAAGGA...CTGAACTGCCCTGGGTAGTTGCAGTTTCCTCAAGATAATCGAGATTTGCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR GCA 90 bp | AGCTCTTCAGCAAAGCCAGCAGATGGCTCATACAGTCCCGACTCCATGAAGAGGGTACTGCAGGGCATCTaGCACTTGCTGGATTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSSAKPADGSYSPDSMKRVLQGI*HLLDCL Trigger: GAGGCAATCCAGCAAGTGGCAGATGCCCTGCAGTAC...CCTCTTCATGGAGTCGGGACTGTATGAGCCATCTGCTGGCTTTGCTGAAGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGAAGCTCTTCAGCAAAGCCAGCAGATGGCTCATACAGTCCCGACTCCAGCATCTGCCACTTGCTaGATTGCCTCCTCTCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: KEEALQQSQQMAHTVPTPASATC*IASSRR Trigger: GCGACGAGAGGAGGCAATCCAGCAAGTGGCAGATGC...TGGAGTCGGGACTGTATGAGCCATCTGCTGGCTTTGCTGAAGAGCTTCTTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR CCA 90 bp | GGTTCAGGTCTACAGTTACTTTCTTTATTCCGCCGTGTTGCTGTTTTCTCTCAGCAATGCTGTGGGAGCTaGGGGAGGTGGCGGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSGLQLLSLFRRVAVFSQQCCGS*GRWRRW Trigger: CCACCGCCGCCACCTCCCCCAGCTCCCACAGCATTG...CTGAGAGAAAACAGCAACACGGCGGAATAAAGAAAGTAACTGTAGACCTGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR CCA 90 bp | GTTCAGGTCTACAGTTACTTTCTTTATTCCGCCGTGTTGCTGTTTTCTCTCAGGCAATGCTGTGGGAGCTaGGGGAGGTGGCGGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VQVYSYFLYSAVLLFSLRQCCGS*GRWRRW Trigger: CCACCGCCGCCACCTCCCCCAGCTCCCACAGCATTG...CCTGAGAGAAAACAGCAACACGGCGGAATAAAGAAAGTAACTGTAGACCTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR GCA 90 bp | CTCTTCAGCAAAGCCAGCAGATGGCTCATACAGTCCCGACTCCATGAAGAGGAAAGGGCATCTGCCACTTaGTGGATTGCCTCCTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LFSKASRWLIQSRLHEEERASAT*WIASSR Trigger: ACGAGAGGAGGCAATCCAGCAAGTGGCAGATGCCCT...TTCCTCTTCATGGAGTCGGGACTGTATGAGCCATCTGCTGGCTTTGCTGAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR GCA 90 bp | TTCAGGGCTGTGTTCACAGGGACCTCACACCAGTTTCAGTTCCTAACTGCAGTTATGGAGCCGTATTCCTaGAGGTGCTCTGGTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FRAVFTGTSHQFQFLTAVMEPYS*RCSGAG Trigger: CCCAGCACCAGAGCACCTGCAGGAATACGGCTCCAT...AACTGCAGTTAGGAACTGAAACTGGTGTGAGGTCCCTGTGAACACAGCCCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR CCA 90 bp | CTCTTCAGCAAAGCCAGCAGATGGCTCATACAGTCCCGACTCCATGAAGAGGAACCTCAGGCTCCGACTTaGTGTTCACACACACGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFSKASRWLIQSRLHEEEPQAPT*CSHTRE Trigger: TTCCCGTGTGTGTGAACACCAAGTCGGAGCCTGAGG...TTCCTCTTCATGGAGTCGGGACTGTATGAGCCATCTGCTGGCTTTGCTGAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR CCA 90 bp | AAGAAGCTCTTCAGCAAAGCCAGCAGATGGCTCATACAGTCCCGACTCCATGAATCTTCCCTGGCAACCTaGCCAGCAGCAGTTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: KKLFSKASRWLIQSRLHESSLAT*PAAVAM Trigger: CATGGCAACTGCTGCTGGCCAGGTTGCCAGGGAAGA...TTCATGGAGTCGGGACTGTATGAGCCATCTGCTGGCTTTGCTGAAGAGCTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| 3UTR CAA 72 bp | GTTCCTTACTGGCTTGCTTCCACTGGCTTCCTCAGCTaGCTTTCTTATAGAACCCAGGACCACCAGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VPYWLASTGFLS*LSYRTQDHQPR Trigger: TCTGGGCTGGTGGTCCTGGGTTCTATAAGAAAGCAAGCTGAGGAAGCCAGTGGAAGCAAGCCAGTAAGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR GCA 90 bp | TTCAGGGCTGTGTTCACAGGGACCTCACACCAGTTTCAGTTCCTAACTGCAGTTAGGGCATCTGCCACTTaGTGGATTGCCTCCTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: FRAVFTGTSHQFQFLTAVRASAT*WIASSR Trigger: ACGAGAGGAGGCAATCCAGCAAGTGGCAGATGCCCT...AACTGCAGTTAGGAACTGAAACTGGTGTGAGGTCCCTGTGAACACAGCCCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTCAGGATCCTTTGAAGGAAGAAGCTCTTCAGCAAAGCCAGCAGATGGCTATGGAGCCGTATTCCTaGAGGTGCTCTGGTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSQDPLKEEALQQSQQMAMEPYS*RCSGAG Trigger: CCCAGCACCAGAGCACCTGCAGGAATACGGCTCCAT...AGCCATCTGCTGGCTTTGCTGAAGAGCTTCTTCCTTCAAAGGATCCTGAGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR GCA 90 bp | AAAGGACAGCTCCCACTCTCAGAAGCCGCAGCCCGCATGGCTACTCTTCATTTATATTTCAGCTTCTCCTaGAGAGCCCGCTCATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KGQLPLSEAAARMATLHLYFSFS*RARSSS Trigger: ACTGGATGAGCGGGCTCTGCAGGAGAAGCTGAAATA...TAAATGAAGAGTAGCCATGCGGGCTGCGGCTTCTGAGAGTGGGAGCTGTCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTCAGGATCCTTTGAAGGAAGAAGCTCTTCAGCAAAGCCAGCAGATGGCTCTGGCCAGCAGCAGTTaGCATGTCAGGGAACATCGG | + |
|
Preference number: 4 (lower is better) Translates to: FSQDPLKEEALQQSQQMALASSS*HVREHR Trigger: CCGATGTTCCCTGACATGGCAACTGCTGCTGGCCAG...AGCCATCTGCTGGCTTTGCTGAAGAGCTTCTTCCTTCAAAGGATCCTGAGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR GCA 90 bp | TTTCTTATAGAACCCAGGACCACCAGCCCAGAGATGGTACCACCCACAAGGGGCGCTCTCACTTGCTCCTaGTCCTTCTGTTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLIEPRTTSPEMVPPTRGALTCS*SFCFFF Trigger: GAAGAAGAAACAGAAGGAGCAGGAGCAAGTGAGAGC...GCCCCTTGTGGGTGGTACCATCTCTGGGCTGGTGGTCCTGGGTTCTATAAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGAAGCTCTTCAGCAAAGCCAGCAGATGGCTCATACAGTCCCGACTCCACTCGTGGCTCTCACTTaGTCCTGCTCCTTCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KEEALQQSQQMAHTVPTPLVALT*SCSFCF Trigger: GAAACAGAAGGAGCAGGAGCAAGTGAGAGCCACGAG...TGGAGTCGGGACTGTATGAGCCATCTGCTGGCTTTGCTGAAGAGCTTCTTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR TCA 90 bp | GGTTCAGGTCTACAGTTACTTTCTTTATTCCGCCGTGTTGCTGTTTTCTCTCAGGCAGGTCGGGCTGGATaGGGGGCACTGCATAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSGLQLLSLFRRVAVFSQAGRAG*GALHKA Trigger: AGCTTTATGCAGTGCCCCTCATCCAGCCCGACCTGC...CTGAGAGAAAACAGCAACACGGCGGAATAAAGAAAGTAACTGTAGACCTGAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR GCA 90 bp | CTCTTCAGCAAAGCCAGCAGATGGCTCATACAGTCCCGACTCCATGAAGAGGAAATTTCTCCTCCTCTGTaGCCAGCATCGTGTGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LFSKASRWLIQSRLHEEEISPPL*PASCAF Trigger: AAACGCACACGATGCTGGGCACAGAGGAGGAGAAAT...TTCCTCTTCATGGAGTCGGGACTGTATGAGCCATCTGCTGGCTTTGCTGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR GCA 90 bp | GTTCAGGTCTACAGTTACTTTCTTTATTCCGCCGTGTTGCTGTTTTCTCTCAGGTGGGGTACTGACCAATaGTGTGGGAGCTGGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VQVYSYFLYSAVLLFSLRWGTDQ*CGSWGR Trigger: CCTCCCCCAGCTCCCACAGCATTGGTCAGTACCCCA...CCTGAGAGAAAACAGCAACACGGCGGAATAAAGAAAGTAACTGTAGACCTGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR CCA 90 bp | AAGAAGCTCTTCAGCAAAGCCAGCAGATGGCTCATACAGTCCCGACTCCATGAAGAACATCGGTGGCTGTaGGGTACTGACCAATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KKLFSKASRWLIQSRLHEEHRWL*GTDQCC Trigger: ACAGCATTGGTCAGTACCCCACAGCCACCGATGTTC...TTCATGGAGTCGGGACTGTATGAGCCATCTGCTGGCTTTGCTGAAGAGCTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| 3UTR CAA 72 bp | ATTCTGGTTTCCACACCCAGTGCAGGGAGAGCATCCTaGGTCTTGCCTTCTCTGAGTGTACAAGGTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ILVSTPSAGRAS*VLPSLSVQGSV Trigger: GACTGAACCTTGTACACTCAGAGAAGGCAAGACCAAGGATGCTCTCCCTGCACTGGGTGTGGAAACCAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTCAGGATCCTTTGAAGGAAGAAGCTCTTCAGCAAAGCCAGCAGATGGCTCTCGTGGCTCTCACTTaGTCCTGCTCCTTCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSQDPLKEEALQQSQQMALVALT*SCSFCF Trigger: GAAACAGAAGGAGCAGGAGCAAGTGAGAGCCACGAG...AGCCATCTGCTGGCTTTGCTGAAGAGCTTCTTCCTTCAAAGGATCCTGAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR CCA 90 bp | CCAAAGAGACACCAGGAGCAAATCTCGATTATCTTGAGGAAACTGCAACTACCCCCTCAGGCTCCGACTTaGTGTTCACACACACGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PKRHQEQISIILRKLQLPPQAPT*CSHTRE Trigger: TTCCCGTGTGTGTGAACACCAAGTCGGAGCCTGAGG...GGGTAGTTGCAGTTTCCTCAAGATAATCGAGATTTGCTCCTGGTGTCTCTTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCAGGATCCTTTGAAGGAAGAAGCTCTTCAGCAAAGCCAGCAGATGGCTTTCTCTAGCTCTGGCTaGAGAGGTTCTGCCACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSQDPLKEEALQQSQQMAFSSSG*RGSATS Trigger: AGAGGTGGCAGAACCTCTCCAGCCAGAGCTAGAGAA...AGCCATCTGCTGGCTTTGCTGAAGAGCTTCTTCCTTCAAAGGATCCTGAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR CCA 90 bp | CCCAAAGAGACACCAGGAGCAAATCTCGATTATCTTGAGGAAACTGCAACTACCGAACATCGGTGGCTGTaGGGTACTGACCAATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PKETPGANLDYLEETATTEHRWL*GTDQCC Trigger: ACAGCATTGGTCAGTACCCCACAGCCACCGATGTTC...GGTAGTTGCAGTTTCCTCAAGATAATCGAGATTTGCTCCTGGTGTCTCTTTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR CAA 72 bp | ATCCCAAAGAGACACCAGGAGCAAATCTCGATTATCTaGAGGAAACTGCAACTACCCAGGGCAGTTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IPKRHQEQISII*RKLQLPRAVQP Trigger: AGGCTGAACTGCCCTGGGTAGTTGCAGTTTCCTCAAGATAATCGAGATTTGCTCCTGGTGTCTCTTTGGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR GCA 90 bp | GGTTCAGGTCTACAGTTACTTTCTTTATTCCGCCGTGTTGCTGTTTTCTCTCAGGTGCGTTTTTGTTACTaGACCAGCCAGAGGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSGLQLLSLFRRVAVFSQVRFCY*TSQRVQ Trigger: CTGGACCCTCTGGCTGGTGCAGTAACAAAAACGCAC...CTGAGAGAAAACAGCAACACGGCGGAATAAAGAAAGTAACTGTAGACCTGAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR GCA 90 bp | GTTCAGGTCTACAGTTACTTTCTTTATTCCGCCGTGTTGCTGTTTTCTCTCAGGGTGCGTTTTTGTTACTaGACCAGCCAGAGGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VQVYSYFLYSAVLLFSLRVRFCY*TSQRVQ Trigger: CTGGACCCTCTGGCTGGTGCAGTAACAAAAACGCAC...CCTGAGAGAAAACAGCAACACGGCGGAATAAAGAAAGTAACTGTAGACCTGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR GCA 90 bp | GTTCAGGTCTACAGTTACTTTCTTTATTCCGCCGTGTTGCTGTTTTCTCTCAGGGTGCCCAGCATCGTGTaGGTTTTTGTTACTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VQVYSYFLYSAVLLFSLRVPSIV*VFVTAP Trigger: TGGTGCAGTAACAAAAACGCACACGATGCTGGGCAC...CCTGAGAGAAAACAGCAACACGGCGGAATAAAGAAAGTAACTGTAGACCTGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| 3UTR CAA 72 bp | TTATTCCGCCGTGTTGCTGTTTTCTCTCAGGATCCTTaGAAGGAAGAAGCTCTTCAGCAAAGCCAGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LFRRVAVFSQDP*KEEALQQSQQM Trigger: CATCTGCTGGCTTTGCTGAAGAGCTTCTTCCTTCAAAGGATCCTGAGAGAAAACAGCAACACGGCGGAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR GCA 90 bp | GGTTCAGGTCTACAGTTACTTTCTTTATTCCGCCGTGTTGCTGTTTTCTCTCAGGCTCTCACTTGCTCCTaGTCCTTCTGTTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSGLQLLSLFRRVAVFSQALTCS*SFCFFF Trigger: GAAGAAGAAACAGAAGGAGCAGGAGCAAGTGAGAGC...CTGAGAGAAAACAGCAACACGGCGGAATAAAGAAAGTAACTGTAGACCTGAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| 3UTR CAA 72 bp | GGGAGGAAAGGGTTTATTCAGTTTACACTTTCCACATaGCTGTTGATCACCAAAGGATGCAGGACTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: GRKGFIQFTLST*LLITKGCRTGT Trigger: AGTTCCAGTCCTGCATCCTTTGGTGATCAACAGCAATGTGGAAAGTGTAAACTGAATAAACCCTTTCCTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| 3UTR CAA 72 bp | AAAGGGTTTATTCAGTTTACACTTTCCACATTGCTGTaGATCACCAAAGGATGCAGGACTGGAACTCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KGFIQFTLSTLL*ITKGCRTGTQA Trigger: TGCTTGAGTTCCAGTCCTGCATCCTTTGGTGATCAACAGCAATGTGGAAAGTGTAAACTGAATAAACCCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR CAA 90 bp | CTTCACAGGTCCCCCTCCCCGGTTTGCCTCCAAGCCCTCCCTGTGGCTTGCAGTTCCTCAGGCTCCGACTaGGTGTTCACACACACGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LHRSPSPVCLQALPVACSSSGSD*VFTHTG Trigger: TCCCGTGTGTGTGAACACCAAGTCGGAGCCTGAGGA...ACTGCAAGCCACAGGGAGGGCTTGGAGGCAAACCGGGGAGGGGGACCTGTGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS GCA 90 bp | GCTGCTGCTAGAGTCTTCTTCCCTGGCAACCTGGCCAGCAGCAGTTaGCATGTCAGGGAACATCGGTGGCTGTGGGGTACTGACCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: AAARVFFPGNLASSS*HVREHRWLWGTDQC Trigger: GCATTGGTCAGTACCCCACAGCCACCGATGTTCCCTGACATGGCAACTGCTGCTGGCCAGGTTGCCAGGGAAGAAGACTCTAGCAGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS CCA 90 bp | ACTTCATTCTCTAGCTCTGGCTGGAGAGGTTCTGCCACCTCTGTGTaGAAGGCAGGCAACTCTGGGATAGCACCAGGAGCAGACGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TSFSSSGWRGSATSV*KAGNSGIAPGADGA Trigger: TGCCCCGTCTGCTCCTGGTGCTATCCCAGAGTTGCCTGCCTTCCACACAGAGGTGGCAGAACCTCTCCAGCCAGAGCTAGAGAATGAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR CAA 90 bp | CTCTTCAGCAAAGCCAGCAGATGGCTCATACAGTCCCGACTCCATGAAGAGGAAGCTCGTGGCTCTCACTaGCTCCTGCTCCTTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LFSKASRWLIQSRLHEEEARGSH*LLLLLF Trigger: AAACAGAAGGAGCAGGAGCAAGTGAGAGCCACGAGC...TTCCTCTTCATGGAGTCGGGACTGTATGAGCCATCTGCTGGCTTTGCTGAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR CAA 90 bp | TCAGGATCCTTTGAAGGAAGAAGCTCTTCAGCAAAGCCAGCAGATGGCTCATACTCCTCAGGCTCCGACTaGGTGTTCACACACACGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SGSFEGRSSSAKPADGSYSSGSD*VFTHTG Trigger: TCCCGTGTGTGTGAACACCAAGTCGGAGCCTGAGGA...GTATGAGCCATCTGCTGGCTTTGCTGAAGAGCTTCTTCCTTCAAAGGATCCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR CAA 90 bp | TCAGGATCCTTTGAAGGAAGAAGCTCTTCAGCAAAGCCAGCAGATGGCTCATACGCTCGTGGCTCTCACTaGCTCCTGCTCCTTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SGSFEGRSSSAKPADGSYARGSH*LLLLLF Trigger: AAACAGAAGGAGCAGGAGCAAGTGAGAGCCACGAGC...GTATGAGCCATCTGCTGGCTTTGCTGAAGAGCTTCTTCCTTCAAAGGATCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR CAA 90 bp | AAGAAGCTCTTCAGCAAAGCCAGCAGATGGCTCATACAGTCCCGACTCCATGAAGCACTAGAAAAGACCTaGATGGCCTTCTTACTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: KKLFSKASRWLIQSRLHEALEKT*MAFLLP Trigger: GGGCAGTAAGAAGGCCATCAAGGTCTTTTCTAGTGC...TTCATGGAGTCGGGACTGTATGAGCCATCTGCTGGCTTTGCTGAAGAGCTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR CAA 90 bp | CCAAGTGGCCCATATCCCAAAGAGACACCAGGAGCAAATCTCGATTATCTTGAGGCACTAGAAAAGACCTaGATGGCCTTCTTACTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PSGPYPKETPGANLDYLEALEKT*MAFLLP Trigger: GGGCAGTAAGAAGGCCATCAAGGTCTTTTCTAGTGC...CTCAAGATAATCGAGATTTGCTCCTGGTGTCTCTTTGGGATATGGGCCACTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR CAA 90 bp | CCCAAAGAGACACCAGGAGCAAATCTCGATTATCTTGAGGAAACTGCAACTACCGCATCGTGTGCGTTTTaGTTACTGCACCAGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PKETPGANLDYLEETATTASCAF*LLHQPE Trigger: CTCTGGCTGGTGCAGTAACAAAAACGCACACGATGC...GGTAGTTGCAGTTTCCTCAAGATAATCGAGATTTGCTCCTGGTGTCTCTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072383.14 |
||
| CDS-3UTR CAA 90 bp | AAGAAGCTCTTCAGCAAAGCCAGCAGATGGCTCATACAGTCCCGACTCCATGAACTCATGACAAGTTTGTaGAAGAGATCTGACATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KKLFSKASRWLIQSRLHELMTSL*KRSDIK Trigger: CTTGATGTCAGATCTCTTCAACAAACTTGTCATGAG...TTCATGGAGTCGGGACTGTATGAGCCATCTGCTGGCTTTGCTGAAGAGCTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS-3UTR CAA 90 bp | GGTTCAGGTCTACAGTTACTTTCTTTATTCCGCCGTGTTGCTGTTTTCTCTCAGCTCATGACAAGTTTGTaGAAGAGATCTGACATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GSGLQLLSLFRRVAVFSQLMTSL*KRSDIK Trigger: CTTGATGTCAGATCTCTTCAACAAACTTGTCATGAG...CTGAGAGAAAACAGCAACACGGCGGAATAAAGAAAGTAACTGTAGACCTGAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS TCA 72 bp | TTGCCATGTCAGGGAACATCGGTGGCTGTGGGGTACTaGCCAATGCTGTGGGAGCTGGGGGAGGTGGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LPCQGTSVAVGY*PMLWELGEVAA Trigger: CGCCGCCACCTCCCCCAGCTCCCACAGCATTGGTCAGTACCCCACAGCCACCGATGTTCCCTGACATGGCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS CCA 72 bp | AGCAGCAGTTGCCATGTCAGGGAACATCGGTGGCTGTaGGGTACTGACCAATGCTGTGGGAGCTGGGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSSCHVREHRWL*GTDQCCGSWGR Trigger: CCTCCCCCAGCTCCCACAGCATTGGTCAGTACCCCACAGCCACCGATGTTCCCTGACATGGCAACTGCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS CCA 72 bp | TCTAGCTCTGGCTGGAGAGGTTCTGCCACCTCTGTGTaGAAGGCAGGCAACTCTGGGATAGCACCAGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSGWRGSATSV*KAGNSGIAPGA Trigger: TGCTCCTGGTGCTATCCCAGAGTTGCCTGCCTTCCACACAGAGGTGGCAGAACCTCTCCAGCCAGAGCTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS CCA 72 bp | GCCATGCTGCTGCTAGAGTCTTCTTCCCTGGCAACCTaGCCAGCAGCAGTTGCCATGTCAGGGAACATCGGT | + |
|
Preference number: 6 (lower is better) Translates to: AMLLLESSSLAT*PAAVAMSGNIG Trigger: ACCGATGTTCCCTGACATGGCAACTGCTGCTGGCCAGGTTGCCAGGGAAGAAGACTCTAGCAGCAGCATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||
| CDS CCA 72 bp | GGTGCTGCCAACAGTACTTCATTCTCTAGCTCTGGCTaGAGAGGTTCTGCCACCTCTGTGTGGAAGGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GAANSTSFSSSG*RGSATSVWKAG Trigger: GCCTGCCTTCCACACAGAGGTGGCAGAACCTCTCCAGCCAGAGCTAGAGAATGAAGTACTGTTGGCAGCACC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072383.14 ENSMUST00000116556.4 |
||