Pregenerated sensors for WASF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029636Ensembl transcript IDs: ENSMUST00000016143.9, ENSMUST00000238592.2
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTCACCAATTACCAAGGACAGCGAGTCACAGCAGCGGCCACGTGTaGGCAGGCTCCAGGATGGCCATGGCGCAGCACAGAGCACTCAGA | + |
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Preference number: 1 (lower is better) Translates to: SHQLPRTASHSSGHV*AGSRMAMAQHRALR Trigger: TCTGAGTGCTCTGTGCTGCGCCATGGCCATCCTGGAGCCTGCGCACACGTGGCCGCTGCTGTGACTCGCTGTCCTTGGTAATTGGTGAGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR CCA 90 bp | CGTGGGGCAGCTGCGCAGATACGTGGCAAGCCCACCAAATCAGGATaGACAGGAGAGGGGACTCTCACGGCTGAGAGGGAAGCAAGATGC | + |
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Preference number: 1 (lower is better) Translates to: RGAAAQIRGKPTKSG*TGEGTLTAEREARC Trigger: GCATCTTGCTTCCCTCTCAGCCGTGAGAGTCCCCTCTCCTGTCCATCCTGATTTGGTGGGCTTGCCACGTATCTGCGCAGCTGCCCCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR TCA 90 bp | AGGGGACTCTCACGGCTGAGAGGGAAGCAAGATGCTGTTCCAGGGTaGTGCACTAATACTGCGAGTTTCCTGGTGTGCAGCACGGTGTGC | + |
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Preference number: 1 (lower is better) Translates to: RGLSRLRGKQDAVPG*CTNTASFLVCSTVC Trigger: GCACACCGTGCTGCACACCAGGAAACTCGCAGTATTAGTGCATCACCCTGGAACAGCATCTTGCTTCCCTCTCAGCCGTGAGAGTCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR TCA 90 bp | CGTATCACCCACTGGTTGGAAGACATCACTGAGACACACAGCCAGTaGTCTTGCAGAGAGCTGACGTGGGGCAGCTGCGCAGATACGTGG | + |
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Preference number: 1 (lower is better) Translates to: RITHWLEDITETHSQ*SCRELTWGSCADTW Trigger: CCACGTATCTGCGCAGCTGCCCCACGTCAGCTCTCTGCAAGATCACTGGCTGTGTGTCTCAGTGATGTCTTCCAACCAGTGGGTGATACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR TCA 90 bp | TGGAAGACATCACTGAGACACACAGCCAGTGATCTTGCAGAGAGCTaGCGTGGGGCAGCTGCGCAGATACGTGGCAAGCCCACCAAATCA | + |
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Preference number: 1 (lower is better) Translates to: WKTSLRHTASDLAES*RGAAAQIRGKPTKS Trigger: TGATTTGGTGGGCTTGCCACGTATCTGCGCAGCTGCCCCACGTCAGCTCTCTGCAAGATCACTGGCTGTGTGTCTCAGTGATGTCTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR TCA 90 bp | ACAGGAGAGAAGAGAGCTGTGCTTCAGGAGGGGTGTGGCCCTGTTTaGGAGACTGAGCAGGAATCTAGCCACAGCACCATGGGTTGTGAA | + |
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Preference number: 1 (lower is better) Translates to: TGEKRAVLQEGCGPV*ETEQESSHSTMGCE Trigger: TTCACAACCCATGGTGCTGTGGCTAGATTCCTGCTCAGTCTCTCAAACAGGGCCACACCCCTCCTGAAGCACAGCTCTCTTCTCTCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR TCA 90 bp | AATAAGCAGCTGTCCTTCCAGAATTGCAAAGCAGACACTGGACTTTaGGCCCCTGCCTCAGCCAGGACTATGGAATCGCCATTTGGTAAA | + |
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Preference number: 1 (lower is better) Translates to: NKQLSFQNCKADTGL*APASARTMESPFGK Trigger: TTTACCAAATGGCGATTCCATAGTCCTGGCTGAGGCAGGGGCTCAAAGTCCAGTGTCTGCTTTGCAATTCTGGAAGGACAGCTGCTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR GCA 90 bp | CATTTGGTAAAAAGGATCAGGGCAGGAGAGGGGAAGTCAGGTCTCTaGCCGGGCAACTGGCTGAATCAAGTTTATCTTGTGAGGTACTTT | + |
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Preference number: 1 (lower is better) Translates to: HLVKRIRAGEGKSGL*PGNWLNQVYLVRYF Trigger: AAAGTACCTCACAAGATAAACTTGATTCAGCCAGTTGCCCGGGCAGAGACCTGACTTCCCCTCTCCTGCCCTGATCCTTTTTACCAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR CCA 90 bp | TGCAAGCGCCAAGATAGAGAAAGCAAACGATCGTACACATTTCCTTaGAGGCCACCAGGCCCAGTGTGCAAACAGACAAACATTTCATTC | + |
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Preference number: 1 (lower is better) Translates to: CKRQDRESKRSYTFP*RPPGPVCKQTNISF Trigger: GAATGAAATGTTTGTCTGTTTGCACACTGGGCCTGGTGGCCTCCAAGGAAATGTGTACGATCGTTTGCTTTCTCTATCTTGGCGCTTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR CCA 90 bp | TCAATTTGCAAAGGGAAGAAACAGGAAAACGTATCACCCACTGGTTaGAAGACATCACTGAGACACACAGCCAGTGATCTTGCAGAGAGC | + |
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Preference number: 1 (lower is better) Translates to: SICKGKKQENVSPTG*KTSLRHTASDLAES Trigger: GCTCTCTGCAAGATCACTGGCTGTGTGTCTCAGTGATGTCTTCCAACCAGTGGGTGATACGTTTTCCTGTTTCTTCCCTTTGCAAATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR TCA 90 bp | TGGAGGCCACCAGGCCCAGTGTGCAAACAGACAAACATTTCATTCTaGTTTGTTAAACTTTCCCCTCTACAACCATATCTACCTGGAATT | + |
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Preference number: 1 (lower is better) Translates to: WRPPGPVCKQTNISF*FVKLSPLQPYLPGI Trigger: AATTCCAGGTAGATATGGTTGTAGAGGGGAAAGTTTAACAAATCAGAATGAAATGTTTGTCTGTTTGCACACTGGGCCTGGTGGCCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR TCA 90 bp | CCATCCACCCACTCTCCAGCTATTCATCTGCCTGAGTTTACACTATaGGAAAATACCGTATCTGAAACTCAGCTACAATACACATGGAAC | + |
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Preference number: 1 (lower is better) Translates to: PSTHSPAIHLPEFTL*ENTVSETQLQYTWN Trigger: GTTCCATGTGTATTGTAGCTGAGTTTCAGATACGGTATTTTCTCATAGTGTAAACTCAGGCAGATGAATAGCTGGAGAGTGGGTGGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR TCA 90 bp | CACACGCCAAAGCAGGGCGTAGGGAGGGGCTTGCACATGGGCTTTCACTGTCATGGGTGTGGCCCTGTTTaGGAGACTGAGCAGGAATCT | + |
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Preference number: 2 (lower is better) Translates to: HTPKQGVGRGLHMGFHCHGCGPV*ETEQES Trigger: AGATTCCTGCTCAGTCTCTCAAACAGGGCCACACCC...ATGACAGTGAAAGCCCATGTGCAAGCCCCTCCCTACGCCCTGCTTTGGCGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR GCA 90 bp | TGCCGACAACAGGAGAGAAGAGAGCTGTGCTTCAGGAGGGGTGTGGCCCTGTTTGGCCTGGCTAACTGGTaGCCAACGCTATCAGGGCTA | + |
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Preference number: 2 (lower is better) Translates to: CRQQERRELCFRRGVALFGLANW*PTLSGL Trigger: TAGCCCTGATAGCGTTGGGCACCAGTTAGCCAGGCC...AAACAGGGCCACACCCCTCCTGAAGCACAGCTCTCTTCTCTCCTGTTGTCGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR CCA 90 bp | CAAATAAACAAAACCGCCTTGCTACTCTGGCTGATACCCTCCCTCCAGACCTCAGCGCAGGCTCCAGGATaGCCATGGCGCAGCACAGAG | + |
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Preference number: 2 (lower is better) Translates to: QINKTALLLWLIPSLQTSAQAPG*PWRSTE Trigger: CTCTGTGCTGCGCCATGGCCATCCTGGAGCCTGCGC...TGAGGTCTGGAGGGAGGGTATCAGCCAGAGTAGCAAGGCGGTTTTGTTTATTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR TCA 90 bp | ACCTGTGCTCACTCCCTGGTGAACAGAGGAGCAGGGATCCCAGAAAATAAAACGTGGGCACTTTCCACATaGGTACCCACAGGGCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: TCAHSLVNRGAGIPENKTWALST*VPTGLP Trigger: GGGGAGCCCTGTGGGTACTCATGTGGAAAGTGCCCA...CGTTTTATTTTCTGGGATCCCTGCTCCTCTGTTCACCAGGGAGTGAGCACAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR GCA 90 bp | AATGTACTCATTTGCCTTCTCAGTGCAGTGATGTGCAGACTCAGGCACCTTCTAAGCAGCGGCCACGTGTaGGCAGGCTCCAGGATGGCC | + |
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Preference number: 2 (lower is better) Translates to: NVLICLLSAVMCRLRHLLSSGHV*AGSRMA Trigger: GGCCATCCTGGAGCCTGCGCACACGTGGCCGCTGCT...TAGAAGGTGCCTGAGTCTGCACATCACTGCACTGAGAAGGCAAATGAGTACATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTGCAGTGATGTGCAGACTCAGGCACCTTCTAGCCACCACCCATCCACCTATCTAGCCACAGCACCATaGGTTGTGAACAGCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: QCSDVQTQAPSSHHPSTYLATAP*VVNSWW Trigger: CCACCAGCTGTTCACAACCCATGGTGCTGTGGCTAG...ATAGGTGGATGGGTGGTGGCTAGAAGGTGCCTGAGTCTGCACATCACTGCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR TCA 90 bp | CTTGGAGGCCACCAGGCCCAGTGTGCAAACAGACAAACATTTCATTCTGATTTGGATCTTGCAGAGAGCTaGCGTGGGGCAGCTGCGCAG | + |
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Preference number: 2 (lower is better) Translates to: LGGHQAQCANRQTFHSDLDLAES*RGAAAQ Trigger: CTGCGCAGCTGCCCCACGTCAGCTCTCTGCAAGATC...CAAATCAGAATGAAATGTTTGTCTGTTTGCACACTGGGCCTGGTGGCCTCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR TCA 90 bp | TGCCGACAACAGGAGAGAAGAGAGCTGTGCTTCAGGAGGGGTGTGGCCCTGTTTGTTGGAAGACATCACTaGGACACACAGCCAGTGATC | + |
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Preference number: 2 (lower is better) Translates to: CRQQERRELCFRRGVALFVGRHH*DTQPVI Trigger: GATCACTGGCTGTGTGTCTCAGTGATGTCTTCCAAC...AAACAGGGCCACACCCCTCCTGAAGCACAGCTCTCTTCTCTCCTGTTGTCGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR GCA 90 bp | TCACAGCAGCGGCCACGTGTGCGCAGGCTCCAGGATGGCCATGGCGCAGCACAGTTAAAATTGAAAATGTaGCGACAACAGGAGAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: SQQRPRVRRLQDGHGAAQLKLKM*RQQERR Trigger: TCTTCTCTCCTGTTGTCGGCACATTTTCAATTTTAA...CTGTGCTGCGCCATGGCCATCCTGGAGCCTGCGCACACGTGGCCGCTGCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGGAGGCCACCAGGCCCAGTGTGCAAACAGACAAACATTTCATTCTGATTTGTGCAGAGAGCTGACGTaGGGCAGCTGCGCAGATACG | + |
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Preference number: 2 (lower is better) Translates to: LGGHQAQCANRQTFHSDLCRELT*GSCADT Trigger: CGTATCTGCGCAGCTGCCCCACGTCAGCTCTCTGCA...CAAATCAGAATGAAATGTTTGTCTGTTTGCACACTGGGCCTGGTGGCCTCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR CCA 90 bp | CAAATAAACAAAACCGCCTTGCTACTCTGGCTGATACCCTCCCTCCAGACCTCATTGCAAAGCAGACACTaGACTTTGAGCCCCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: QINKTALLLWLIPSLQTSLQSRH*TLSPCL Trigger: GAGGCAGGGGCTCAAAGTCCAGTGTCTGCTTTGCAA...TGAGGTCTGGAGGGAGGGTATCAGCCAGAGTAGCAAGGCGGTTTTGTTTATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR GCA 90 bp | GGCGTAGGGAGGGGCTTGCACATGGGCTTTCACTGTCATAGTGACATGAGGAAACTGTCCTTCCAGAATTaGAAAGCAGACACTGGACTT | + |
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Preference number: 2 (lower is better) Translates to: GVGRGLHMGFHCHSDMRKLSFQN*KADTGL Trigger: AAGTCCAGTGTCTGCTTTGCAATTCTGGAAGGACAG...TTTCCTCATGTCACTATGACAGTGAAAGCCCATGTGCAAGCCCCTCCCTACGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR CCA 90 bp | AATGTACTCATTTGCCTTCTCAGTGCAGTGATGTGCAGACTCAGGCACCTTCTATCGTACACATTTCCTTaGAGGCCACCAGGCCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: NVLICLLSAVMCRLRHLLSYTFP*RPPGPV Trigger: CACTGGGCCTGGTGGCCTCCAAGGAAATGTGTACGA...TAGAAGGTGCCTGAGTCTGCACATCACTGCACTGAGAAGGCAAATGAGTACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR GCA 90 bp | TCAGCCAGGACTATGGAATCGCCATTTGGTAAAAAGGATCAGGGCAGGAGAGGGAAAGTGAACTCCATCTaGCAAAGTCAGTGGGCACTT | + |
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Preference number: 2 (lower is better) Translates to: SARTMESPFGKKDQGRRGKVNSI*QSQWAL Trigger: AAGTGCCCACTGACTTTGGCAGATGGAGTTCACTTT...CCCTCTCCTGCCCTGATCCTTTTTACCAAATGGCGATTCCATAGTCCTGGCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGGAGGCCACCAGGCCCAGTGTGCAAACAGACAAACATTTCATTCTGATTTGAAACGTATCACCCACTaGTTGGAAGACATCACTGAG | + |
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Preference number: 2 (lower is better) Translates to: LGGHQAQCANRQTFHSDLKRITH*LEDITE Trigger: CTCAGTGATGTCTTCCAACCAGTGGGTGATACGTTT...CAAATCAGAATGAAATGTTTGTCTGTTTGCACACTGGGCCTGGTGGCCTCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR TCA 90 bp | AATGTACTCATTTGCCTTCTCAGTGCAGTGATGTGCAGACTCAGGCACCTTCTAACTGTCATAGTGACATaGGGAAAACCTACTACTGGC | + |
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Preference number: 2 (lower is better) Translates to: NVLICLLSAVMCRLRHLLTVIVT*GKPTTG Trigger: GCCAGTAGTAGGTTTTCCTCATGTCACTATGACAGT...TAGAAGGTGCCTGAGTCTGCACATCACTGCACTGAGAAGGCAAATGAGTACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR CCA 90 bp | AATAAACAAAACCGCCTTGCTACTCTGGCTGATACCCTCCCTCCAGACCTCAATGTGTGCTGTGTTCTGTaGCACTTAAGTATTACACAG | + |
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Preference number: 2 (lower is better) Translates to: NKQNRLATLADTLPPDLNVCCVL*HLSITQ Trigger: CTGTGTAATACTTAAGTGCCACAGAACACAGCACAC...ATTGAGGTCTGGAGGGAGGGTATCAGCCAGAGTAGCAAGGCGGTTTTGTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR CCA 90 bp | TCAAATGTATCACGCATTTCTGCTGAAAATATTACAAAGCTTTCACACCCTCATGGGAAGGCAGTGTCCTaGTCCCTCTGCAAGGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: SNVSRISAENITKLSHPHGKAVS*SLCKVL Trigger: GAGGACCTTGCAGAGGGACCAGGACACTGCCTTCCC...ATGAGGGTGTGAAAGCTTTGTAATATTTTCAGCAGAAATGCGTGATACATTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR GCA 90 bp | AATGTACTCATTTGCCTTCTCAGTGCAGTGATGTGCAGACTCAGGCACCTTCTAAATCCTGACAATGGCTaGGTAGCTTTAATGTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: NVLICLLSAVMCRLRHLLNPDNG*VALMSS Trigger: GGAAGACATTAAAGCTACGCAGCCATTGTCAGGATT...TAGAAGGTGCCTGAGTCTGCACATCACTGCACTGAGAAGGCAAATGAGTACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR TCA 90 bp | TCAAATGTATCACGCATTTCTGCTGAAAATATTACAAAGCTTTCACACCCTCATGAGACACACAGCCAGTaGTCTTGCAGAGAGCTGACG | + |
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Preference number: 2 (lower is better) Translates to: SNVSRISAENITKLSHPHETHSQ*SCRELT Trigger: CGTCAGCTCTCTGCAAGATCACTGGCTGTGTGTCTC...ATGAGGGTGTGAAAGCTTTGTAATATTTTCAGCAGAAATGCGTGATACATTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR TCA 90 bp | AATAAACAAAACCGCCTTGCTACTCTGGCTGATACCCTCCCTCCAGACCTCAATATAAAATCTAAATACTaGAGCTTGGGGTTTGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: NKQNRLATLADTLPPDLNIKSKY*SLGFGA Trigger: AGCACCAAACCCCAAGCTTCAGTATTTAGATTTTAT...ATTGAGGTCTGGAGGGAGGGTATCAGCCAGAGTAGCAAGGCGGTTTTGTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCGGGCAACTGGCTGAATCAAGTTTATCTTGTGAGGTACTTTTTAAAATTGTATCACCCACTGGTTaGAAGACATCACTGAGACAC | + |
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Preference number: 2 (lower is better) Translates to: LPGQLAESSLSCEVLFKIVSPTG*KTSLRH Trigger: GTGTCTCAGTGATGTCTTCCAACCAGTGGGTGATAC...AATTTTAAAAAGTACCTCACAAGATAAACTTGATTCAGCCAGTTGCCCGGGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR CAA 90 bp | GGCCACCAGGCCCAGTGTGCAAACAGACAAACATTTCATTCTGATTaGTTAAACTTTCCCCTCTACAACCATATCTACCTGGAATTCAAT | + |
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Preference number: 2 (lower is better) Translates to: GHQAQCANRQTFHSD*LNFPLYNHIYLEFN Trigger: ATTGAATTCCAGGTAGATATGGTTGTAGAGGGGAAAGTTTAACAAATCAGAATGAAATGTTTGTCTGTTTGCACACTGGGCCTGGTGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCCCGGGCAACTGGCTGAATCAAGTTTATCTTGTGAGGTACTTTTTAAAATTAAATCCAGAAGGATGTaGAGAAGCAAATCACACTGT | + |
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Preference number: 2 (lower is better) Translates to: LPGQLAESSLSCEVLFKIKSRRM*RSKSHC Trigger: ACAGTGTGATTTGCTTCTGCACATCCTTCTGGATTT...AATTTTAAAAAGTACCTCACAAGATAAACTTGATTCAGCCAGTTGCCCGGGCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR TCA 90 bp | TCAAATGTATCACGCATTTCTGCTGAAAATATTACAAAGCTTTCACACCCTCATCCATCCATCTGTAATTaGTCCATCTATCTGCCATCC | + |
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Preference number: 2 (lower is better) Translates to: SNVSRISAENITKLSHPHPSICN*SIYLPS Trigger: GGATGGCAGATAGATGGATCAATTACAGATGGATGG...ATGAGGGTGTGAAAGCTTTGTAATATTTTCAGCAGAAATGCGTGATACATTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR CCA 90 bp | TCAAATGTATCACGCATTTCTGCTGAAAATATTACAAAGCTTTCACACCCTCATAGGAAAACCTACTACTaGCAGGTGTTACAGGATAGC | + |
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Preference number: 2 (lower is better) Translates to: SNVSRISAENITKLSHPHRKTYY*QVLQDS Trigger: GCTATCCTGTAACACCTGCCAGTAGTAGGTTTTCCT...ATGAGGGTGTGAAAGCTTTGTAATATTTTCAGCAGAAATGCGTGATACATTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR CCA 72 bp | GCAGCGGCCACGTGTGCGCAGGCTCCAGGATGGCCATaGCGCAGCACAGAGCACTCAGACACACGCCAAAGC | + |
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Preference number: 3 (lower is better) Translates to: AAATCAQAPGWP*RSTEHSDTRQS Trigger: GCTTTGGCGTGTGTCTGAGTGCTCTGTGCTGCGCCATGGCCATCCTGGAGCCTGCGCACACGTGGCCGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR CCA 72 bp | GTCACAGCAGCGGCCACGTGTGCGCAGGCTCCAGGATaGCCATGGCGCAGCACAGAGCACTCAGACACACGC | + |
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Preference number: 3 (lower is better) Translates to: VTAAATCAQAPG*PWRSTEHSDTR Trigger: GCGTGTGTCTGAGTGCTCTGTGCTGCGCCATGGCCATCCTGGAGCCTGCGCACACGTGGCCGCTGCTGTGAC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR-3UTR CAA 90 bp | AGCGAGTCACAGCAGCGGCCACGTGTGCGCAGGCTCCAGGATGGCCATGGCGCAATCGTACACATTTCCTaGGAGGCCACCAGGCCCAGT | + |
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Preference number: 3 (lower is better) Translates to: SESQQRPRVRRLQDGHGAIVHIS*EATRPS Trigger: ACTGGGCCTGGTGGCCTCCAAGGAAATGTGTACGAT...TGCGCCATGGCCATCCTGGAGCCTGCGCACACGTGGCCGCTGCTGTGACTCGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR CCA 72 bp | TGCAGAGAGCTGACGTGGGGCAGCTGCGCAGATACGTaGCAAGCCCACCAAATCAGGATGGACAGGAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: CRELTWGSCADT*QAHQIRMDRRG Trigger: CCCTCTCCTGTCCATCCTGATTTGGTGGGCTTGCCACGTATCTGCGCAGCTGCCCCACGTCAGCTCTCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR TCA 72 bp | TCACTGAGACACACAGCCAGTGATCTTGCAGAGAGCTaGCGTGGGGCAGCTGCGCAGATACGTGGCAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: SLRHTASDLAES*RGAAAQIRGKP Trigger: GGGCTTGCCACGTATCTGCGCAGCTGCCCCACGTCAGCTCTCTGCAAGATCACTGGCTGTGTGTCTCAGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR TCA 72 bp | CACTGGTTGGAAGACATCACTGAGACACACAGCCAGTaGTCTTGCAGAGAGCTGACGTGGGGCAGCTGCGCA | + |
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Preference number: 3 (lower is better) Translates to: HWLEDITETHSQ*SCRELTWGSCA Trigger: TGCGCAGCTGCCCCACGTCAGCTCTCTGCAAGATCACTGGCTGTGTGTCTCAGTGATGTCTTCCAACCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR TCA 72 bp | CAAATCAGGATGGACAGGAGAGGGGACTCTCACGGCTaGGAGGGAAGCAAGATGCTGTTCCAGGGTGATGCA | + |
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Preference number: 3 (lower is better) Translates to: QIRMDRRGDSHG*EGSKMLFQGDA Trigger: TGCATCACCCTGGAACAGCATCTTGCTTCCCTCTCAGCCGTGAGAGTCCCCTCTCCTGTCCATCCTGATTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR CCA 72 bp | GCAGACTCTAGGCAGCTTGAACATGGCCTGGCTAACTaGTGCCCAACGCTATCAGGGCTAGCCATGAAAGTG | + |
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Preference number: 3 (lower is better) Translates to: ADSRQLEHGLAN*CPTLSGLAMKV Trigger: CACTTTCATGGCTAGCCCTGATAGCGTTGGGCACCAGTTAGCCAGGCCATGTTCAAGCTGCCTAGAGTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| 3UTR CCA 72 bp | CTGTTCCAGGGTGATGCACTAATACTGCGAGTTTCCTaGTGTGCAGCACGGTGTGCTGTGTTCTGTGGCACT | + |
|
Preference number: 3 (lower is better) Translates to: LFQGDALILRVS*CAARCAVFCGT Trigger: AGTGCCACAGAACACAGCACACCGTGCTGCACACCAGGAAACTCGCAGTATTAGTGCATCACCCTGGAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| 3UTR GCA 72 bp | TTGAAAATGTGCCGACAACAGGAGAGAAGAGAGCTGTaGTTCAGGAGGGGTGTGGCCCTGTTTGAGAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: LKMCRQQERREL*FRRGVALFERL Trigger: CAGTCTCTCAAACAGGGCCACACCCCTCCTGAAGCACAGCTCTCTTCTCTCCTGTTGTCGGCACATTTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| 3UTR GCA 72 bp | AAAAGGATCAGGGCAGGAGAGGGGAAGTCAGGTCTCTaGCCGGGCAACTGGCTGAATCAAGTTTATCTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: KRIRAGEGKSGL*PGNWLNQVYLV Trigger: CACAAGATAAACTTGATTCAGCCAGTTGCCCGGGCAGAGACCTGACTTCCCCTCTCCTGCCCTGATCCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| 3UTR CCA 72 bp | ACACTGGACTTTGAGCCCCTGCCTCAGCCAGGACTATaGAATCGCCATTTGGTAAAAAGGATCAGGGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TLDFEPLPQPGL*NRHLVKRIRAG Trigger: TCCTGCCCTGATCCTTTTTACCAAATGGCGATTCCATAGTCCTGGCTGAGGCAGGGGCTCAAAGTCCAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCTGTGCTCACTCCCTGGTGAACAGAGGAGCAGGGATCCCAGAAAATAAAACGCAGACTCTAGGCAGCTaGAACATGGCCTGGCTAACT | + |
|
Preference number: 3 (lower is better) Translates to: TCAHSLVNRGAGIPENKTQTLGS*NMAWLT Trigger: AGTTAGCCAGGCCATGTTCAAGCTGCCTAGAGTCTG...CGTTTTATTTTCTGGGATCCCTGCTCCTCTGTTCACCAGGGAGTGAGCACAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| 3UTR-3UTR CAA 90 bp | CACACGCCAAAGCAGGGCGTAGGGAGGGGCTTGCACATGGGCTTTCACTGTCATTACCTGGAATTCAATTaGCAAAGGGAAGAAACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: HTPKQGVGRGLHMGFHCHYLEFN*QREETG Trigger: TCCTGTTTCTTCCCTTTGCAAATTGAATTCCAGGTA...ATGACAGTGAAAGCCCATGTGCAAGCCCCTCCCTACGCCCTGCTTTGGCGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGACTATGGAATCGCCATTTGGTAAAAAGGATCAGGGCAGGAGAGGGGAAGTCCGTATCACCCACTGGTaGGAAGACATCACTGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: RTMESPFGKKDQGRRGEVRITHW*EDITET Trigger: TGTCTCAGTGATGTCTTCCAACCAGTGGGTGATACG...GACTTCCCCTCTCCTGCCCTGATCCTTTTTACCAAATGGCGATTCCATAGTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| 3UTR TCA 72 bp | AGGAAAACGTATCACCCACTGGTTGGAAGACATCACTaGGACACACAGCCAGTGATCTTGCAGAGAGCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: RKTYHPLVGRHH*DTQPVILQRAD Trigger: GTCAGCTCTCTGCAAGATCACTGGCTGTGTGTCTCAGTGATGTCTTCCAACCAGTGGGTGATACGTTTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| 3UTR CCA 72 bp | TTTGAGAGACTGAGCAGGAATCTAGCCACAGCACCATaGGTTGTGAACAGCTGGTGGCATCTCTCAGCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: FERLSRNLATAP*VVNSWWHLSAK Trigger: TTTAGCTGAGAGATGCCACCAGCTGTTCACAACCCATGGTGCTGTGGCTAGATTCCTGCTCAGTCTCTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| 3UTR CCA 72 bp | GCAGGAGAGGGGAAGTCAGGTCTCTGCCCGGGCAACTaGCTGAATCAAGTTTATCTTGTGAGGTACTTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: AGEGKSGLCPGN*LNQVYLVRYFL Trigger: TAAAAAGTACCTCACAAGATAAACTTGATTCAGCCAGTTGCCCGGGCAGAGACCTGACTTCCCCTCTCCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| 3UTR TCA 72 bp | GGGGCTTGCACATGGGCTTTCACTGTCATAGTGACATaGGGAAAACCTACTACTGGCAGGTGTTACAGGATA | + |
|
Preference number: 3 (lower is better) Translates to: GACTWAFTVIVT*GKPTTGRCYRI Trigger: TATCCTGTAACACCTGCCAGTAGTAGGTTTTCCTCATGTCACTATGACAGTGAAAGCCCATGTGCAAGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| 3UTR GCA 72 bp | TATAATGTACTCATTTGCCTTCTCAGTGCAGTGATGTaGAGACTCAGGCACCTTCTAGCCACCACCCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: YNVLICLLSAVM*RLRHLLATTHP Trigger: TGGATGGGTGGTGGCTAGAAGGTGCCTGAGTCTGCACATCACTGCACTGAGAAGGCAAATGAGTACATTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| 3UTR CCA 72 bp | CAAGATAGAGAAAGCAAACGATCGTACACATTTCCTTaGAGGCCACCAGGCCCAGTGTGCAAACAGACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: QDRESKRSYTFP*RPPGPVCKQTN Trigger: GTTTGTCTGTTTGCACACTGGGCCTGGTGGCCTCCAAGGAAATGTGTACGATCGTTTGCTTTCTCTATCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| 3UTR CCA 72 bp | GGCTCAAATGTCAACGTCGCGAGGATGATGTCAACATaGTGGGTCTCAGTGTGGAAAAGCAGAACTGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GSNVNVARMMST*WVSVWKSRTEK Trigger: TTTCTCAGTTCTGCTTTTCCACACTGAGACCCACCATGTTGACATCATCCTCGCGACGTTGACATTTGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| 3UTR CCA 72 bp | TTTGCCAAACATGAGTGCTGGGTTCTACAGGGCACATaGGAGACAGAACAAAAGGCTCAAATGTCAACGTCG | + |
|
Preference number: 3 (lower is better) Translates to: FAKHECWVLQGT*ETEQKAQMSTS Trigger: CGACGTTGACATTTGAGCCTTTTGTTCTGTCTCCCATGTGCCCTGTAGAACCCAGCACTCATGTTTGGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| 3UTR TCA 72 bp | AGGCGATGTGGGCGGCTGGGTGACATCCCAAACTCATaGGCAAAAACCATTTTTAATTATCCCACAGGCATT | + |
|
Preference number: 3 (lower is better) Translates to: RRCGRLGDIPNS*AKTIFNYPTGI Trigger: AATGCCTGTGGGATAATTAAAAATGGTTTTTGCTCATGAGTTTGGGATGTCACCCAGCCGCCCACATCGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| 3UTR CCA 72 bp | AAAGGGAAGAAACAGGAAAACGTATCACCCACTGGTTaGAAGACATCACTGAGACACACAGCCAGTGATCTT | + |
|
Preference number: 3 (lower is better) Translates to: KGKKQENVSPTG*KTSLRHTASDL Trigger: AAGATCACTGGCTGTGTGTCTCAGTGATGTCTTCCAACCAGTGGGTGATACGTTTTCCTGTTTCTTCCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| 3UTR TCA 72 bp | CCATTTTTAATTATCCCACAGGCATTCCCTGTCAACTaGCACAATGTCACCCCGGATCTGAATCTTTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: PFLIIPQAFPVN*HNVTPDLNLSF Trigger: AAAAGAAAGATTCAGATCCGGGGTGACATTGTGTCAGTTGACAGGGAATGCCTGTGGGATAATTAAAAATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| 3UTR TCA 72 bp | CCAGGCCCAGTGTGCAAACAGACAAACATTTCATTCTaGTTTGTTAAACTTTCCCCTCTACAACCATATCTA | + |
|
Preference number: 3 (lower is better) Translates to: PGPVCKQTNISF*FVKLSPLQPYL Trigger: TAGATATGGTTGTAGAGGGGAAAGTTTAACAAATCAGAATGAAATGTTTGTCTGTTTGCACACTGGGCCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| 3UTR TCA 72 bp | CACTCTCCAGCTATTCATCTGCCTGAGTTTACACTATaGGAAAATACCGTATCTGAAACTCAGCTACAATAC | + |
|
Preference number: 3 (lower is better) Translates to: HSPAIHLPEFTL*ENTVSETQLQY Trigger: GTATTGTAGCTGAGTTTCAGATACGGTATTTTCTCATAGTGTAAACTCAGGCAGATGAATAGCTGGAGAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| 3UTR TCA 72 bp | GACCTCAATGGATTCAAATGTATCACGCATTTCTGCTaGAAATATTACAAAGCTTTCACACCCTCATCATCC | + |
|
Preference number: 3 (lower is better) Translates to: DLNGFKCITHFC*KYYKAFTPSSS Trigger: GGATGATGAGGGTGTGAAAGCTTTGTAATATTTTCAGCAGAAATGCGTGATACATTTGAATCCATTGAGGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR CCA 90 bp | AGCGAGTCACAGCAGCGGCCACGTGTGCGCAGGCTCCAGGATGGCCATGGCGCATGGGGGACCTGGGGGTaGTGGTGCTGTGGCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SESQQRPRVRRLQDGHGAWGTWG*WCCGQE Trigger: CTCCTGGCCACAGCACCACCACCCCCAGGTCCCCCA...TGCGCCATGGCCATCCTGGAGCCTGCGCACACGTGGCCGCTGCTGTGACTCGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR GCA 90 bp | AGCGAGTCACAGCAGCGGCCACGTGTGCGCAGGCTCCAGGATGGCCATGGCGCACAGGGCCATGTGCCTTaGCGAGGCAGACGACGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SESQQRPRVRRLQDGHGAQGHVP*RGRRRS Trigger: CGACCGTCGTCTGCCTCGGCAAGGCACATGGCCCTG...TGCGCCATGGCCATCCTGGAGCCTGCGCACACGTGGCCGCTGCTGTGACTCGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR CCA 90 bp | AGCGAGTCACAGCAGCGGCCACGTGTGCGCAGGCTCCAGGATGGCCATGGCGCAGAGGAGTGGGGTATGTaGAGACGGCTGAGGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SESQQRPRVRRLQDGHGAEEWGM*RRLRQG Trigger: TCCCTGCCTCAGCCGTCTCCACATACCCCACTCCTC...TGCGCCATGGCCATCCTGGAGCCTGCGCACACGTGGCCGCTGCTGTGACTCGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR CCA 90 bp | GCAGAGAGCACAGGAGCTCCTAACACACTTGCATATGGGGCCCTGGCTGTCCACAGGAGGTGGGGGACCTaGGGGTGGTGGTGCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AESTGAPNTLAYGALAVHRRWGT*GWWCCG Trigger: GCCACAGCACCACCACCCCCAGGTCCCCCACCTCCT...GTGGACAGCCAGGGCCCCATATGCAAGTGTGTTAGGAGCTCCTGTGCTCTCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR TCA 90 bp | GCAGAGAGCACAGGAGCTCCTAACACACTTGCATATGGGGCCCTGGCTGTCCACGTATGTGGAGACGGCTaGGGCAGGGAACGGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AESTGAPNTLAYGALAVHVCGDG*GRERGL Trigger: CAGCCCCCGTTCCCTGCCTCAGCCGTCTCCACATAC...GTGGACAGCCAGGGCCCCATATGCAAGTGTGTTAGGAGCTCCTGTGCTCTCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR CCA 90 bp | AGCGAGTCACAGCAGCGGCCACGTGTGCGCAGGCTCCAGGATGGCCATGGCGCAGTGAGACCTAGTATCTaGGGACAGAGATCCCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SESQQRPRVRRLQDGHGAVRPSI*GQRSLG Trigger: TCCGAGGGATCTCTGTCCCCAGATACTAGGTCTCAC...TGCGCCATGGCCATCCTGGAGCCTGCGCACACGTGGCCGCTGCTGTGACTCGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR GCA 90 bp | AGCGAGTCACAGCAGCGGCCACGTGTGCGCAGGCTCCAGGATGGCCATGGCGCACAACAGGGTTGGGAATaGTGTTCTTGGAGACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SESQQRPRVRRLQDGHGAQQGWE*CSWRPP Trigger: AGGTGGTCTCCAAGAACAGCATTCCCAACCCTGTTG...TGCGCCATGGCCATCCTGGAGCCTGCGCACACGTGGCCGCTGCTGTGACTCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR CCA 90 bp | CACACGCCAAAGCAGGGCGTAGGGAGGGGCTTGCACATGGGCTTTCACTGTCATAGGAGGCGGTGGCGGTaGCTGCTGAGGTCTGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTPKQGVGRGLHMGFHCHRRRWR*LLRSVQ Trigger: CTGAACAGACCTCAGCAGCCACCGCCACCGCCTCCT...ATGACAGTGAAAGCCCATGTGCAAGCCCCTCCCTACGCCCTGCTTTGGCGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR CCA 90 bp | CAGTGCAGTGATGTGCAGACTCAGGCACCTTCTAGCCACCACCCATCCACCTATCTGGGGAGGAGGCGGTaGCGGTGGCTGCTGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QCSDVQTQAPSSHHPSTYLGRRR*RWLLRS Trigger: AGACCTCAGCAGCCACCGCCACCGCCTCCTCCCCAG...ATAGGTGGATGGGTGGTGGCTAGAAGGTGCCTGAGTCTGCACATCACTGCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| 3UTR CAA 72 bp | GTGAGGGTGCAGAGAGCACAGGAGCTCCTAACACACTaGCATATGGGGCCCTGGCTGTCCACTGGTCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VRVQRAQELLTH*HMGPWLSTGRL Trigger: CAGGCGACCAGTGGACAGCCAGGGCCCCATATGCAAGTGTGTTAGGAGCTCCTGTGCTCTCTGCACCCTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR GCA 90 bp | CAGTGCAGTGATGTGCAGACTCAGGCACCTTCTAGCCACCACCCATCCACCTATACCTGGGGGTGGTGGTaGTGTGGCCAGGAGCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QCSDVQTQAPSSHHPSTYTWGWW*CGQEPS Trigger: ACTGGGCTCCTGGCCACAGCACCACCACCCCCAGGT...ATAGGTGGATGGGTGGTGGCTAGAAGGTGCCTGAGTCTGCACATCACTGCACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR CCA 90 bp | CACACGCCAAAGCAGGGCGTAGGGAGGGGCTTGCACATGGGCTTTCACTGTCATGCTGGTGAGGAGGAGTaGGGTATGTGGAGACGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTPKQGVGRGLHMGFHCHAGEEE*GMWRRL Trigger: CAGCCGTCTCCACATACCCCACTCCTCCTCACCAGC...ATGACAGTGAAAGCCCATGTGCAAGCCCCTCCCTACGCCCTGCTTTGGCGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR CCA 90 bp | TGCCGACAACAGGAGAGAAGAGAGCTGTGCTTCAGGAGGGGTGTGGCCCTGTTTCGCATCACTTATGGGTaGCTGTGCAGGCTCTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: CRQQERRELCFRRGVALFRITYG*LCRLWA Trigger: CGCCCAGAGCCTGCACAGCCACCCATAAGTGATGCG...AAACAGGGCCACACCCCTCCTGAAGCACAGCTCTCTTCTCTCCTGTTGTCGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR TCA 90 bp | GCAGAGAGCACAGGAGCTCCTAACACACTTGCATATGGGGCCCTGGCTGTCCACGAAGGCAGTTTGTGCTaGGGGAATCATGGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AESTGAPNTLAYGALAVHEGSLC*GNHGWR Trigger: CCTCCACCCATGATTCCCTCAGCACAAACTGCCTTC...GTGGACAGCCAGGGCCCCATATGCAAGTGTGTTAGGAGCTCCTGTGCTCTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR TCA 90 bp | TGCCGACAACAGGAGAGAAGAGAGCTGTGCTTCAGGAGGGGTGTGGCCCTGTTTGCATCTGGAGAGGGCTaGCGAAGGCAGTTTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CRQQERRELCFRRGVALFASGEG*RRQFVL Trigger: CAGCACAAACTGCCTTCGTCAGCCCTCTCCAGATGC...AAACAGGGCCACACCCCTCCTGAAGCACAGCTCTCTTCTCTCCTGTTGTCGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR GCA 90 bp | CAGTGCAGTGATGTGCAGACTCAGGCACCTTCTAGCCACCACCCATCCACCTATCTGTTCAGGGCCATGTaGCTTGCCGAGGCAGACGAC | + |
|
Preference number: 4 (lower is better) Translates to: QCSDVQTQAPSSHHPSTYLFRAM*LAEADD Trigger: GTCGTCTGCCTCGGCAAGGCACATGGCCCTGAACAG...ATAGGTGGATGGGTGGTGGCTAGAAGGTGCCTGAGTCTGCACATCACTGCACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR TCA 90 bp | CTTGGAGGCCACCAGGCCCAGTGTGCAAACAGACAAACATTTCATTCTGATTTGGTCGGCTGGAGCCACTaGCGTAGAGGCCTGGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: LGGHQAQCANRQTFHSDLVGWSH*RRGLGP Trigger: GGGTCCCAGGCCTCTACGTCAGTGGCTCCAGCCGAC...CAAATCAGAATGAAATGTTTGTCTGTTTGCACACTGGGCCTGGTGGCCTCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR CCA 90 bp | GGCGTAGGGAGGGGCTTGCACATGGGCTTTCACTGTCATAGTGACATGAGGAAAGTGCTGAGGGAATCATaGGTGGAGGGGGAGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GVGRGLHMGFHCHSDMRKVLRES*VEGEVV Trigger: CACCACCTCCCCCTCCACCCATGATTCCCTCAGCAC...TTTCCTCATGTCACTATGACAGTGAAAGCCCATGTGCAAGCCCCTCCCTACGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| 3UTR CAA 72 bp | CGCTCTGCCATGCAAGCTCTGCAGACTCTAGGCAGCTaGAACATGGCCTGGCTAACTGGTGCCCAACGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: RSAMQALQTLGS*NMAWLTGAQRY Trigger: ATAGCGTTGGGCACCAGTTAGCCAGGCCATGTTCAAGCTGCCTAGAGTCTGCAGAGCTTGCATGGCAGAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR TCA 90 bp | ACCTGTGCTCACTCCCTGGTGAACAGAGGAGCAGGGATCCCAGAAAATAAAACGCCGTGGTGCACACTCTaGGACAACCTGTTGTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TCAHSLVNRGAGIPENKTPWCTL*DNLLSG Trigger: GCCCGACAACAGGTTGTCTCAGAGTGTGCACCACGG...CGTTTTATTTTCTGGGATCCCTGCTCCTCTGTTCACCAGGGAGTGAGCACAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR GCA 90 bp | TGTCCTTCCAGAATTGCAAAGCAGACACTGGACTTTGAGCCCCTGCCTCAGCCAACTTATGGGTGGCTGTaGAGGCTCTGGGCGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CPSRIAKQTLDFEPLPQPTYGWL*RLWALC Trigger: GCAAAGCGCCCAGAGCCTGCACAGCCACCCATAAGT...TGGCTGAGGCAGGGGCTCAAAGTCCAGTGTCTGCTTTGCAATTCTGGAAGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCTTCCAGAATTGCAAAGCAGACACTGGACTTTGAGCCCCTGCCTCAGCCACTCAGACTGCTCAGCTaGCGGATGATTGCAGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CPSRIAKQTLDFEPLPQPLRLLS*RMIAAS Trigger: GCTCGCTGCAATCATCCGCCAGCTGAGCAGTCTGAG...TGGCTGAGGCAGGGGCTCAAAGTCCAGTGTCTGCTTTGCAATTCTGGAAGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR GCA 90 bp | TCAGCCAGGACTATGGAATCGCCATTTGGTAAAAAGGATCAGGGCAGGAGAGGGAGATCCCTCGGAGGATaGTCCGTGGTGCACACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SARTMESPFGKKDQGRRGRSLGG*SVVHTL Trigger: CAGAGTGTGCACCACGGAGCATCCTCCGAGGGATCT...CCCTCTCCTGCCCTGATCCTTTTTACCAAATGGCGATTCCATAGTCCTGGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR CCA 90 bp | GGCGTAGGGAGGGGCTTGCACATGGGCTTTCACTGTCATAGTGACATGAGGAAAACCGTGGAGTCCAGCTaGGTGACTTTGACAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GVGRGLHMGFHCHSDMRKTVESS*VTLTAS Trigger: GCTTGCTGTCAAAGTCACCCAGCTGGACTCCACGGT...TTTCCTCATGTCACTATGACAGTGAAAGCCCATGTGCAAGCCCCTCCCTACGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR CCA 90 bp | CACACGCCAAAGCAGGGCGTAGGGAGGGGCTTGCACATGGGCTTTCACTGTCATTGCACCTTTTTCAGTTaGATTCCCATCCGGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HTPKQGVGRGLHMGFHCHCTFFS*IPIRMA Trigger: TGCCATCCGGATGGGAATCCAACTGAAAAAGGTGCA...ATGACAGTGAAAGCCCATGTGCAAGCCCCTCCCTACGCCCTGCTTTGGCGTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR TCA 90 bp | CACACGCCAAAGCAGGGCGTAGGGAGGGGCTTGCACATGGGCTTTCACTGTCATCGATCGATTCTGTCTTaGAGGGAATTTGCTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: HTPKQGVGRGLHMGFHCHRSILS*REFALM Trigger: CATCAGAGCAAATTCCCTTCAAGACAGAATCGATCG...ATGACAGTGAAAGCCCATGTGCAAGCCCCTCCCTACGCCCTGCTTTGGCGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR GCA 90 bp | TCAGCCAGGACTATGGAATCGCCATTTGGTAAAAAGGATCAGGGCAGGAGAGGGTGGTTTGTGGTCCCATaGAGTGGTGCATCGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SARTMESPFGKKDQGRRGWFVVP*SGASPA Trigger: AGCTGGCGATGCACCACTGCATGGGACCACAAACCA...CCCTCTCCTGCCCTGATCCTTTTTACCAAATGGCGATTCCATAGTCCTGGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
||
| CDS-3UTR CCA 90 bp | AATAAACAAAACCGCCTTGCTACTCTGGCTGATACCCTCCCTCCAGACCTCAATGGCTGTGTGGGCATCTaGAGAGGGCTGACGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NKQNRLATLADTLPPDLNGCVGI*RGLTKA Trigger: TGCCTTCGTCAGCCCTCTCCAGATGCCCACACAGCC...ATTGAGGTCTGGAGGGAGGGTATCAGCCAGAGTAGCAAGGCGGTTTTGTTTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS-3UTR CCA 90 bp | AATGTACTCATTTGCCTTCTCAGTGCAGTGATGTGCAGACTCAGGCACCTTCTACGACAGGCTCCCGCTTaGCTTCCTGCTCGCGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: NVLICLLSAVMCRLRHLLRQAPA*LPARVA Trigger: AGCAACGCGAGCAGGAAGCCAAGCGGGAGCCTGTCG...TAGAAGGTGCCTGAGTCTGCACATCACTGCACTGAGAAGGCAAATGAGTACATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS-3UTR GCA 90 bp | AATAAACAAAACCGCCTTGCTACTCTGGCTGATACCCTCCCTCCAGACCTCAATGCTTCCTGCTCGCGTTaGTCCTGCACCTTTTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: NKQNRLATLADTLPPDLNASCSR*SCTFFS Trigger: ACTGAAAAAGGTGCAGGAGCAACGCGAGCAGGAAGC...ATTGAGGTCTGGAGGGAGGGTATCAGCCAGAGTAGCAAGGCGGTTTTGTTTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS-3UTR CCA 90 bp | CAAATAAACAAAACCGCCTTGCTACTCTGGCTGATACCCTCCCTCCAGACCTCATGGGAATGCTGTTCTTaGAGACCACCTGCTGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: QINKTALLLWLIPSLQTSWECCS*RPPAGL Trigger: AAGACCAGCAGGTGGTCTCCAAGAACAGCATTCCCA...TGAGGTCTGGAGGGAGGGTATCAGCCAGAGTAGCAAGGCGGTTTTGTTTATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS-3UTR CCA 90 bp | GGTCTCTGCCCGGGCAACTGGCTGAATCAAGTTTATCTTGTGAGGTACTTTTTAGGATTCCCATCCGGATaGCAGCCAAGAGGTCACTTC | + |
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Preference number: 4 (lower is better) Translates to: GLCPGNWLNQVYLVRYFLGFPSG*QPRGHF Trigger: GAAGTGACCTCTTGGCTGCCATCCGGATGGGAATCC...TAAAAAGTACCTCACAAGATAAACTTGATTCAGCCAGTTGCCCGGGCAGAGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS-3UTR CCA 90 bp | GGTCTCTGCCCGGGCAACTGGCTGAATCAAGTTTATCTTGTGAGGTACTTTTTATTTTCACCTCTCGGGTaGTGCCATCTACACGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: GLCPGNWLNQVYLVRYFLFSPLG*CHLHAF Trigger: AAAAGCGTGTAGATGGCACCACCCGAGAGGTGAAAA...TAAAAAGTACCTCACAAGATAAACTTGATTCAGCCAGTTGCCCGGGCAGAGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS-3UTR GCA 90 bp | ACCTGTGCTCACTCCCTGGTGAACAGAGGAGCAGGGATCCCAGAAAATAAAACGACCAAATATGTCTTCTaGATGTTTACTCAGACTGCT | + |
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Preference number: 4 (lower is better) Translates to: TCAHSLVNRGAGIPENKTTKYVF*MFTQTA Trigger: AGCAGTCTGAGTAAACATGCAGAAGACATATTTGGT...CGTTTTATTTTCTGGGATCCCTGCTCCTCTGTTCACCAGGGAGTGAGCACAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS-3UTR CCA 90 bp | GGTCTCTGCCCGGGCAACTGGCTGAATCAAGTTTATCTTGTGAGGTACTTTTTATTCAATTATCTGTGCTaGAAGCATCCCATAGTCGGC | + |
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Preference number: 4 (lower is better) Translates to: GLCPGNWLNQVYLVRYFLFNYLC*KHPIVG Trigger: GCCGACTATGGGATGCTTCCAGCACAGATAATTGAA...TAAAAAGTACCTCACAAGATAAACTTGATTCAGCCAGTTGCCCGGGCAGAGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS-3UTR TCA 90 bp | TCAAATGTATCACGCATTTCTGCTGAAAATATTACAAAGCTTTCACACCCTCATCTCAGAGTCGTCGTCTaGGTCGCTGTACTCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: SNVSRISAENITKLSHPHLRVVV*VAVLHS Trigger: GCTGTGGAGTACAGCGACTCAGACGACGACTCTGAG...ATGAGGGTGTGAAAGCTTTGTAATATTTTCAGCAGAAATGCGTGATACATTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS-3UTR GCA 90 bp | AGGACTATGGAATCGCCATTTGGTAAAAAGGATCAGGGCAGGAGAGGGGAAGTCGTCTTGAAGGGAATTTaGTCTGATGTAGAAGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: RTMESPFGKKDQGRRGEVVLKGI*SDVEVV Trigger: AACAACTTCTACATCAGAGCAAATTCCCTTCAAGAC...GACTTCCCCTCTCCTGCCCTGATCCTTTTTACCAAATGGCGATTCCATAGTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS-3UTR GCA 90 bp | AATAAACAAAACCGCCTTGCTACTCTGGCTGATACCCTCCCTCCAGACCTCAATGTATTCAATTATCTGTaGTGGAAGCATCCCATAGTC | + |
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Preference number: 4 (lower is better) Translates to: NKQNRLATLADTLPPDLNVFNYL*WKHPIV Trigger: GACTATGGGATGCTTCCAGCACAGATAATTGAATAC...ATTGAGGTCTGGAGGGAGGGTATCAGCCAGAGTAGCAAGGCGGTTTTGTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS-3UTR TCA 90 bp | AATGTACTCATTTGCCTTCTCAGTGCAGTGATGTGCAGACTCAGGCACCTTCTAATGCTTTCTTCATGTTaGTATCCTGTAGTGAGACCT | + |
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Preference number: 4 (lower is better) Translates to: NVLICLLSAVMCRLRHLLMLSSC*YPVVRP Trigger: AGGTCTCACTACAGGATATCAACATGAAGAAAGCAT...TAGAAGGTGCCTGAGTCTGCACATCACTGCACTGAGAAGGCAAATGAGTACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS-3UTR TCA 90 bp | TCAAATGTATCACGCATTTCTGCTGAAAATATTACAAAGCTTTCACACCCTCATAGGTGGTGGCGGTCCTaGGGGGCTGTAGTATTCAAT | + |
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Preference number: 4 (lower is better) Translates to: SNVSRISAENITKLSHPHRWWRS*GAVVFN Trigger: ATTGAATACTACAGCCCCTCAGGACCGCCACCACCT...ATGAGGGTGTGAAAGCTTTGTAATATTTTCAGCAGAAATGCGTGATACATTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS-3UTR GCA 90 bp | AATGTACTCATTTGCCTTCTCAGTGCAGTGATGTGCAGACTCAGGCACCTTCTAGGTAGAGCTTTTGAATaGTTTCTTCATGTTGATATC | + |
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Preference number: 4 (lower is better) Translates to: NVLICLLSAVMCRLRHLLGRAFE*FLHVDI Trigger: GATATCAACATGAAGAAAGCATTCAAAAGCTCTACC...TAGAAGGTGCCTGAGTCTGCACATCACTGCACTGAGAAGGCAAATGAGTACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS-3UTR GCA 90 bp | TCAAATGTATCACGCATTTCTGCTGAAAATATTACAAAGCTTTCACACCCTCATTGCTCGCGTTGCTCCTaGACCTTTTTCAGTTGGATT | + |
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Preference number: 4 (lower is better) Translates to: SNVSRISAENITKLSHPHCSRCS*TFFSWI Trigger: AATCCAACTGAAAAAGGTGCAGGAGCAACGCGAGCA...ATGAGGGTGTGAAAGCTTTGTAATATTTTCAGCAGAAATGCGTGATACATTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS TCA 90 bp | CGGCTGAGGCAGGGAACGGGGGCTGTGTGGGCATCTGGAGAGGGCTaGCGAAGGCAGTTTGTGCTGAGGGAATCATGGGTGGAGGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: RLRQGTGAVWASGEG*RRQFVLRESWVEGE Trigger: CTCCCCCTCCACCCATGATTCCCTCAGCACAAACTGCCTTCGTCAGCCCTCTCCAGATGCCCACACAGCCCCCGTTCCCTGCCTCAGCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS-3UTR CAA 90 bp | TCACAGCAGCGGCCACGTGTGCGCAGGCTCCAGGATGGCCATGGCGCAGCACAGTGTCGCCGGCTGTGCTaGCAAAGCATGGTTGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SQQRPRVRRLQDGHGAAQCRRLC*QSMVGS Trigger: ACTCCCAACCATGCTTTGCAAGCACAGCCGGCGACA...CTGTGCTGCGCCATGGCCATCCTGGAGCCTGCGCACACGTGGCCGCTGCTGTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS-3UTR CAA 90 bp | CACACGCCAAAGCAGGGCGTAGGGAGGGGCTTGCACATGGGCTTTCACTGTCATCAGGCTCTGGGCGCTTaGCCTCAGCCACAGGGGGAC | + |
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Preference number: 5 (lower is better) Translates to: HTPKQGVGRGLHMGFHCHQALGA*PQPQGD Trigger: GTCCCCCTGTGGCTGAGGCAAAGCGCCCAGAGCCTG...ATGACAGTGAAAGCCCATGTGCAAGCCCCTCCCTACGCCCTGCTTTGGCGTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS CCA 90 bp | TATGTGGAGACGGCTGAGGCAGGGAACGGGGGCTGTGTGGGCATCTaGAGAGGGCTGACGAAGGCAGTTTGTGCTGAGGGAATCATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: YVETAEAGNGGCVGI*RGLTKAVCAEGIMG Trigger: ACCCATGATTCCCTCAGCACAAACTGCCTTCGTCAGCCCTCTCCAGATGCCCACACAGCCCCCGTTCCCTGCCTCAGCCGTCTCCACATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS GCA 90 bp | TCATTCCCGACAGGCTCCCGCTTGGCTTCCTGCTCGCGTTGCTCCTaGACCTTTTTCAGTTGGATTCCCATCCGGATGGCAGCCAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SFPTGSRLASCSRCS*TFFSWIPIRMAAKR Trigger: CCTCTTGGCTGCCATCCGGATGGGAATCCAACTGAAAAAGGTGCAGGAGCAACGCGAGCAGGAAGCCAAGCGGGAGCCTGTCGGGAATGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS GCA 90 bp | CCTGGTGTCGTCTTCCTTGGCGCTCCCTGCCTGATCCAGCCTCTTTaGGTCACTCATGAATTCAATGCCCATTTTCCTCCTCTCCCACTC | + |
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Preference number: 5 (lower is better) Translates to: PGVVFLGAPCLIQPL*VTHEFNAHFPPLPL Trigger: GAGTGGGAGAGGAGGAAAATGGGCATTGAATTCATGAGTGACGCAAAGAGGCTGGATCAGGCAGGGAGCGCCAAGGAAGACGACACCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238592.2 |
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| CDS GCA 90 bp | TGTGTGAGACCCTCTTGGCCTGGTGTCGTCTTCCTTGGCGCTCCCTaGCTGATCCAGCCTCTTTGCGTCACTCATGAATTCAATGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: CVRPSWPGVVFLGAP*LIQPLCVTHEFNAH Trigger: ATGGGCATTGAATTCATGAGTGACGCAAAGAGGCTGGATCAGGCAGGGAGCGCCAAGGAAGACGACACCAGGCCAAGAGGGTCTCACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238592.2 |
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| CDS CCA 90 bp | AGCAGGATAAGAATAATCGGTGACATCGGATGTGTGAGACCCTCTTaGCCTGGTGTCGTCTTCCTTGGCGCTCCCTGCCTGATCCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: SRIRIIGDIGCVRPS*PGVVFLGAPCLIQP Trigger: AGGCTGGATCAGGCAGGGAGCGCCAAGGAAGACGACACCAGGCCAAGAGGGTCTCACACATCCGATGTCACCGATTATTCTTATCCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238592.2 |
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| CDS-3UTR CAA 90 bp | TGCCGACAACAGGAGAGAAGAGAGCTGTGCTTCAGGAGGGGTGTGGCCCTGTTTGACCACCTGCTGGTCTaGGATGGTAGAGCTTTTGAA | + |
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Preference number: 5 (lower is better) Translates to: CRQQERRELCFRRGVALFDHLLV*DGRAFE Trigger: TTCAAAAGCTCTACCATCCAAGACCAGCAGGTGGTC...AAACAGGGCCACACCCCTCCTGAAGCACAGCTCTCTTCTCTCCTGTTGTCGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS-3UTR CAA 90 bp | TGCCGACAACAGGAGAGAAGAGAGCTGTGCTTCAGGAGGGGTGTGGCCCTGTTTTTCAGCCCATCCTTCTaGTCATCTCTGTACGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: CRQQERRELCFRRGVALFFSPSF*SSLYGV Trigger: GACACCGTACAGAGATGACAAGAAGGATGGGCTGAA...AAACAGGGCCACACCCCTCCTGAAGCACAGCTCTCTTCTCTCCTGTTGTCGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS-3UTR CAA 90 bp | GGCGTAGGGAGGGGCTTGCACATGGGCTTTCACTGTCATAGTGACATGAGGAAATTGGGAATGCTGTTCTaGGAGACCACCTGCTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: GVGRGLHMGFHCHSDMRKLGMLF*ETTCWS Trigger: AGACCAGCAGGTGGTCTCCAAGAACAGCATTCCCAA...TTTCCTCATGTCACTATGACAGTGAAAGCCCATGTGCAAGCCCCTCCCTACGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS-3UTR CAA 90 bp | CAAATAAACAAAACCGCCTTGCTACTCTGGCTGATACCCTCCCTCCAGACCTCAGGCTTCCTGCTCGCGTaGCTCCTGCACCTTTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QINKTALLLWLIPSLQTSGFLLA*LLHLFQ Trigger: CTGAAAAAGGTGCAGGAGCAACGCGAGCAGGAAGCC...TGAGGTCTGGAGGGAGGGTATCAGCCAGAGTAGCAAGGCGGTTTTGTTTATTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS-3UTR CAA 90 bp | ACCTGTGCTCACTCCCTGGTGAACAGAGGAGCAGGGATCCCAGAAAATAAAACGTCCAGCTGGGTGACTTaGACAGCAAGCCGATCGATT | + |
|
Preference number: 5 (lower is better) Translates to: TCAHSLVNRGAGIPENKTSSWVT*TASRSI Trigger: AATCGATCGGCTTGCTGTCAAAGTCACCCAGCTGGA...CGTTTTATTTTCTGGGATCCCTGCTCCTCTGTTCACCAGGGAGTGAGCACAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS-3UTR CAA 90 bp | TCAGCCAGGACTATGGAATCGCCATTTGGTAAAAAGGATCAGGGCAGGAGAGGGCTGCACCTTTTTCAGTaGGATTCCCATCCGGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: SARTMESPFGKKDQGRRGLHLFQ*DSHPDG Trigger: GCCATCCGGATGGGAATCCAACTGAAAAAGGTGCAG...CCCTCTCCTGCCCTGATCCTTTTTACCAAATGGCGATTCCATAGTCCTGGCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS CCA 90 bp | ATGTCAGCAACAGGGTTGGGAATGCTGTTCTTGGAGACCACCTGCTaGTCTTGGATGGTAGAGCTTTTGAATGCTTTCTTCATGTTGATA | + |
|
Preference number: 5 (lower is better) Translates to: MSATGLGMLFLETTC*SWMVELLNAFFMLI Trigger: TATCAACATGAAGAAAGCATTCAAAAGCTCTACCATCCAAGACCAGCAGGTGGTCTCCAAGAACAGCATTCCCAACCCTGTTGCTGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS-3UTR CAA 90 bp | CTGCCCGGGCAACTGGCTGAATCAAGTTTATCTTGTGAGGTACTTTTTAAAATTTGGATGGTAGAGCTTTaGAATGCTTTCTTCATGTTG | + |
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Preference number: 5 (lower is better) Translates to: LPGQLAESSLSCEVLFKIWMVEL*NAFFML Trigger: CAACATGAAGAAAGCATTCAAAAGCTCTACCATCCA...AATTTTAAAAAGTACCTCACAAGATAAACTTGATTCAGCCAGTTGCCCGGGCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS TCA 72 bp | GGGCTGGTGAGGAGGAGTGGGGTATGTGGAGACGGCTaGGGCAGGGAACGGGGGCTGTGTGGGCATCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GLVRRSGVCGDG*GRERGLCGHLE Trigger: CTCCAGATGCCCACACAGCCCCCGTTCCCTGCCTCAGCCGTCTCCACATACCCCACTCCTCCTCACCAGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS CCA 72 bp | ACGGCTGAGGCAGGGAACGGGGGCTGTGTGGGCATCTaGAGAGGGCTGACGAAGGCAGTTTGTGCTGAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: TAEAGNGGCVGI*RGLTKAVCAEG Trigger: TCCCTCAGCACAAACTGCCTTCGTCAGCCCTCTCCAGATGCCCACACAGCCCCCGTTCCCTGCCTCAGCCGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS CAA 90 bp | TTGCCGAGGCAGACGACGGTCGGTACTCGTGCTCAGCGCCTTGGTTaGTGGTCCCATGCAGTGGTGCATCGCCAGCTGTGTAGGAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LPRQTTVGTRAQRLG*WSHAVVHRQLCRRV Trigger: CACCCTCCTACACAGCTGGCGATGCACCACTGCATGGGACCACAAACCAAGGCGCTGAGCACGAGTACCGACCGTCGTCTGCCTCGGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016143.9 ENSMUST00000238592.2 |
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| CDS CAA 90 bp | GTGCCTTGCCGAGGCAGACGACGGTCGGTACTCGTGCTCAGCGCCTaGGTTTGTGGTCCCATGCAGTGGTGCATCGCCAGCTGTGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: VPCRGRRRSVLVLSA*VCGPMQWCIASCVG Trigger: TCCTACACAGCTGGCGATGCACCACTGCATGGGACCACAAACCAAGGCGCTGAGCACGAGTACCGACCGTCGTCTGCCTCGGCAAGGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016143.9 ENSMUST00000238592.2 |
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| CDS GCA 72 bp | ATGTGCCTTGCCGAGGCAGACGACGGTCGGTACTCGTaGTCAGCGCCTTGGTTTGTGGTCCCATGCAGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: MCLAEADDGRYS*SAPWFVVPCSG Trigger: ACCACTGCATGGGACCACAAACCAAGGCGCTGAGCACGAGTACCGACCGTCGTCTGCCTCGGCAAGGCACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016143.9 ENSMUST00000238592.2 |
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| CDS GCA 72 bp | ACAGGCTCCCGCTTGGCTTCCTGCTCGCGTTGCTCCTaGACCTTTTTCAGTTGGATTCCCATCCGGATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: TGSRLASCSRCS*TFFSWIPIRMA Trigger: TGCCATCCGGATGGGAATCCAACTGAAAAAGGTGCAGGAGCAACGCGAGCAGGAAGCCAAGCGGGAGCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS GCA 72 bp | CCCTCTTGGCCTGGTGTCGTCTTCCTTGGCGCTCCCTaGCTGATCCAGCCTCTTTGCGTCACTCATGAATTC | + |
|
Preference number: 6 (lower is better) Translates to: PSWPGVVFLGAP*LIQPLCVTHEF Trigger: GAATTCATGAGTGACGCAAAGAGGCTGGATCAGGCAGGGAGCGCCAAGGAAGACGACACCAGGCCAAGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238592.2 |
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| CDS TCA 72 bp | CTTGGCCTGGTGTCGTCTTCCTTGGCGCTCCCTGCCTaGTCCAGCCTCTTTGCGTCACTCATGAATTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: LGLVSSSLALPA*SSLFASLMNSM Trigger: CATTGAATTCATGAGTGACGCAAAGAGGCTGGATCAGGCAGGGAGCGCCAAGGAAGACGACACCAGGCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238592.2 |
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| CDS GCA 72 bp | GCAACAGGGTTGGGAATGCTGTTCTTGGAGACCACCTaGTGGTCTTGGATGGTAGAGCTTTTGAATGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: ATGLGMLFLETT*WSWMVELLNAF Trigger: GAAAGCATTCAAAAGCTCTACCATCCAAGACCAGCAGGTGGTCTCCAAGAACAGCATTCCCAACCCTGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS GCA 72 bp | GCCCATCCTTCTTGTCATCTCTGTACGGTGTCAGAATaGTCAGCGGCGGGGGTTTGTCACTCTGATTATAAA | + |
|
Preference number: 6 (lower is better) Translates to: AHPSCHLCTVSE*SAAGVCHSDYK Trigger: TTTATAATCAGAGTGACAAACCCCCGCCGCTGAGCATTCTGACACCGTACAGAGATGACAAGAAGGATGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS CAA 90 bp | CCTCTCCCACTCTTCTCTTCTCGTCCTGACTTTTCTCACATACACTaGCTGGTTCCTGCTAGGGTTCAGCTTGAGTTTCTCTCTCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PLPLFSSRPDFSHIH*LVPARVQLEFLSLL Trigger: CAGAAGAGAGAGAAACTCAAGCTGAACCCTAGCAGGAACCAGCAAGTGTATGTGAGAAAAGTCAGGACGAGAAGAGAAGAGTGGGAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238592.2 |
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| CDS CCA 72 bp | ACAGGGTTGGGAATGCTGTTCTTGGAGACCACCTGCTaGTCTTGGATGGTAGAGCTTTTGAATGCTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TGLGMLFLETTC*SWMVELLNAFF Trigger: GAAGAAAGCATTCAAAAGCTCTACCATCCAAGACCAGCAGGTGGTCTCCAAGAACAGCATTCCCAACCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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| CDS CCA 72 bp | TCTCTTCTCGTCCTGACTTTTCTCACATACACTTGCTaGTTCCTGCTAGGGTTCAGCTTGAGTTTCTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SLLVLTFLTYTC*FLLGFSLSFSL Trigger: GAGAGAGAAACTCAAGCTGAACCCTAGCAGGAACCAGCAAGTGTATGTGAGAAAAGTCAGGACGAGAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238592.2 |
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| CDS GCA 72 bp | TCTTCTCTTCTCGTCCTGACTTTTCTCACATACACTTaGTGGTTCCTGCTAGGGTTCAGCTTGAGTTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSLLVLTFLTYT*WFLLGFSLSFS Trigger: AGAGAAACTCAAGCTGAACCCTAGCAGGAACCAGCAAGTGTATGTGAGAAAAGTCAGGACGAGAAGAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238592.2 |
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| CDS CAA 72 bp | CTGGGTGACTTTGACAGCAAGCCGATCGATTCTGTCTaGAAGGGAATTTGCTCTGATGTAGAAGTTGTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: LGDFDSKPIDSV*KGICSDVEVVS Trigger: GCTAACAACTTCTACATCAGAGCAAATTCCCTTCAAGACAGAATCGATCGGCTTGCTGTCAAAGTCACCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016143.9 |
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