Pregenerated sensors for WASF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028868Ensembl transcript IDs: ENSMUST00000084241.12, ENSMUST00000105912.2
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGAGGCTGACACGTCGGAGTTGGAGCTCCTGGCCCTGGTATGGTaGTTCCCTCCCCAGGCCCTGAGGTCAAGTCAGGGGCTGCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: PEADTSELELLALVW*FPPQALRSSQGLQQ Trigger: CTGCTGCAGCCCCTGACTTGACCTCAGGGCCTGGGGAGGGAAGCACCATACCAGGGCCAGGAGCTCCAACTCCGACGTGTCAGCCTCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR GCA 90 bp | GGAGGGAGCTGCAGTGAACTGCAAACTGCACCTGCCAAGGCTGGCTaGCCCACAGCTCCTCTCTACACTGCCTCCCCAGCACAGCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: GGSCSELQTAPAKAG*PTAPLYTASPAQLP Trigger: TGGGAGCTGTGCTGGGGAGGCAGTGTAGAGAGGAGCTGTGGGGCAGCCAGCCTTGGCAGGTGCAGTTTGCAGTTCACTGCAGCTCCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR CCA 90 bp | CCTCCCCGCACAGGCCATGAACCCTCCAAATGCAAGGCCGGCATTTaGGAGCTCTGGGGTAGAAGGGAGCCAGGCTGCTCTGCCCAGACT | + |
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Preference number: 1 (lower is better) Translates to: PPRTGHEPSKCKAGI*ELWGRREPGCSAQT Trigger: AGTCTGGGCAGAGCAGCCTGGCTCCCTTCTACCCCAGAGCTCCCAAATGCCGGCCTTGCATTTGGAGGGTTCATGGCCTGTGCGGGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR GCA 90 bp | AAGCAAGCCTACCTGCTGCAGAAGGCTGAGTGTGGGGCAGGAGTGTaGCAGTCTACTTGTCAGGGCACAGAAAAGGGACCACCTGCGCCC | + |
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Preference number: 1 (lower is better) Translates to: KQAYLLQKAECGAGV*QSTCQGTEKGPPAP Trigger: GGGCGCAGGTGGTCCCTTTTCTGTGCCCTGACAAGTAGACTGGCACACTCCTGCCCCACACTCAGCCTTCTGCAGCAGGTAGGCTTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR TCA 90 bp | CAGCTCCTCTCTACACTGCCTCCCCAGCACAGCTCCCATGCCACATaGCTGGCTGCAGACAGAAGGGGAAATAAGAGCGGCTTACCAGAG | + |
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Preference number: 1 (lower is better) Translates to: QLLSTLPPQHSSHAT*LAADRRGNKSGLPE Trigger: CTCTGGTAAGCCGCTCTTATTTCCCCTTCTGTCTGCAGCCAGTCATGTGGCATGGGAGCTGTGCTGGGGAGGCAGTGTAGAGAGGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR TCA 90 bp | ATCCAGGCAGAGCTAACAGAAGCAAGCCTACCTGCTGCAGAAGGCTaGGTGTGGGGCAGGAGTGTGCCAGTCTACTTGTCAGGGCACAGA | + |
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Preference number: 1 (lower is better) Translates to: IQAELTEASLPAAEG*VWGRSVPVYLSGHR Trigger: TCTGTGCCCTGACAAGTAGACTGGCACACTCCTGCCCCACACTCAGCCTTCTGCAGCAGGTAGGCTTGCTTCTGTTAGCTCTGCCTGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR GCA 90 bp | GAACAAAGGCATCCAGGCAGAGCTAACAGAAGCAAGCCTACCTGCTaGAGAAGGCTGAGTGTGGGGCAGGAGTGTGCCAGTCTACTTGTC | + |
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Preference number: 1 (lower is better) Translates to: EQRHPGRANRSKPTC*RRLSVGQECASLLV Trigger: GACAAGTAGACTGGCACACTCCTGCCCCACACTCAGCCTTCTGCAGCAGGTAGGCTTGCTTCTGTTAGCTCTGCCTGGATGCCTTTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR GCA 90 bp | CTGGAACAAAGGCATCCAGGCAGAGCTAACAGAAGCAAGCCTACCTaGTGCAGAAGGCTGAGTGTGGGGCAGGAGTGTGCCAGTCTACTT | + |
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Preference number: 1 (lower is better) Translates to: LEQRHPGRANRSKPT*CRRLSVGQECASLL Trigger: AAGTAGACTGGCACACTCCTGCCCCACACTCAGCCTTCTGCAGCAGGTAGGCTTGCTTCTGTTAGCTCTGCCTGGATGCCTTTGTTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR CCA 90 bp | TGTGGACCCTCAGGAGCCCGCAGGCAGACACGAGGAAGAAGCATATaGTCAGTTGAAGGAAGCACTCGGATAGATCTTTGGCTTTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: CGPSGARRQTRGRSI*SVEGSTRIDLWLWP Trigger: GGGCCAAAGCCAAAGATCTATCCGAGTGCTTCCTTCAACTGACCATATGCTTCTTCCTCGTGTCTGCCTGCGGGCTCCTGAGGGTCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR CCA 90 bp | GGAAGAAGCATATGGTCAGTTGAAGGAAGCACTCGGATAGATCTTTaGCTTTGGCCCCTTGCAGTTCTTTGTCCCTTGCTTTCTTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: GRSIWSVEGSTRIDL*LWPLAVLCPLLSSP Trigger: GGGGGAAGAAAGCAAGGGACAAAGAACTGCAAGGGGCCAAAGCCAAAGATCTATCCGAGTGCTTCCTTCAACTGACCATATGCTTCTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGGAGGTAAAGGGGGTGGGTCAGCATCATCATGCACAGCAAGGTGGTGAGAGAGGCCCAGGTCCCTaGGTGTCAGGGCTAGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: GREVKGVGQHHHAQQGGERGPGP*VSGLVW Trigger: CCAAACTAGCCCTGACACTCAGGGACCTGGGCCTCT...CTCACCACCTTGCTGTGCATGATGATGCTGACCCACCCCCTTTACCTCCCTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR-3UTR GCA 90 bp | TCACCCAGAGAGAGCATGGGAGGAAGGCCACACCCTCAGTCTCCAGAAGGGCATAGAAAAGGGACCACCTaGGCCCACACAGGCTGTACC | + |
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Preference number: 2 (lower is better) Translates to: SPRESMGGRPHPQSPEGHRKGTT*AHTGCT Trigger: GGTACAGCCTGTGTGGGCGCAGGTGGTCCCTTTTCT...ATGCCCTTCTGGAGACTGAGGGTGTGGCCTTCCTCCCATGCTCTCTCTGGGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCCTGATGCCTTCTGGAACAAAGGCATCCAGGCAGAGCTAACAGAAGCAAGCGGATCAGCTCAGCTGTaGACCCTCAGGAGCCCGCAG | + |
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Preference number: 2 (lower is better) Translates to: RPDAFWNKGIQAELTEASGSAQL*TLRSPQ Trigger: CTGCGGGCTCCTGAGGGTCCACAGCTGAGCTGATCC...GCTTGCTTCTGTTAGCTCTGCCTGGATGCCTTTGTTCCAGAAGGCATCAGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGGGACCACCTGCGCCCACACAGGCTGTACCCACTGCTGTGAGACAGGAGGTTTGGCTTTGGCCCCTTaGAGTTCTTTGTCCCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: KGTTCAHTGCTHCCETGGLALAP*SSLSLA Trigger: AGCAAGGGACAAAGAACTGCAAGGGGCCAAAGCCAA...ACCTCCTGTCTCACAGCAGTGGGTACAGCCTGTGTGGGCGCAGGTGGTCCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGGAGGTAAAGGGGGTGGGTCAGCATCATCATGCACAGCAAGGTGGTGAGTTCAAGTTTTGCTCCTaGCAGTCAGCAGAGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: GREVKGVGQHHHAQQGGEFKFCS*QSAEAQ Trigger: CTGGGCCTCTGCTGACTGTCAGGAGCAAAACTTGAA...CTCACCACCTTGCTGTGCATGATGATGCTGACCCACCCCCTTTACCTCCCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR-3UTR TCA 90 bp | GAAGGGACGTGGCTCCTTGGCCTCACGCTTAAGAGTCCTTATGGGCCACTGCTTCCCAGGAAACACAGGTaGCTTGGAAACAGGAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: EGTWLLGLTLKSPYGPLLPRKHR*LGNRKP Trigger: AGGCTTCCTGTTTCCAAGTCACCTGTGTTTCCTGGG...AAGCAGTGGCCCATAAGGACTCTTAAGCGTGAGGCCAAGGAGCCACGTCCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR-3UTR GCA 90 bp | AGGCATCCAGGCAGAGCTAACAGAAGCAAGCCTACCTGCTGCAGAAGGCTGAGTACAGGCTGTACCCACTaGTGTGAGACAGGAGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: RHPGRANRSKPTCCRRLSTGCTH*CETGGG Trigger: TCCACCTCCTGTCTCACAGCAGTGGGTACAGCCTGT...ACTCAGCCTTCTGCAGCAGGTAGGCTTGCTTCTGTTAGCTCTGCCTGGATGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR-3UTR GCA 90 bp | AACAAAGGCATCCAGGCAGAGCTAACAGAAGCAAGCCTACCTGCTGCAGAAGGCTGTGGGGCAGGAGTGTaGCAGTCTACTTGTCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: NKGIQAELTEASLPAAEGCGAGV*QSTCQG Trigger: GCCCTGACAAGTAGACTGGCACACTCCTGCCCCACA...GCCTTCTGCAGCAGGTAGGCTTGCTTCTGTTAGCTCTGCCTGGATGCCTTTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGGGACGTGGCTCCTTGGCCTCACGCTTAAGAGTCCTTATGGGCCACTGCTTACTCTCTTCCAGTCCTaGGGTGCCACACCTTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: EGTWLLGLTLKSPYGPLLTLFQS*GATPSS Trigger: ACTTGAAGGTGTGGCACCGCAGGACTGGAAGAGAGT...AAGCAGTGGCCCATAAGGACTCTTAAGCGTGAGGCCAAGGAGCCACGTCCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR-3UTR CCA 90 bp | AAAGGGACCACCTGCGCCCACACAGGCTGTACCCACTGCTGTGAGACAGGAGGTACTCGGATAGATCTTTaGCTTTGGCCCCTTGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: KGTTCAHTGCTHCCETGGTRIDL*LWPLAV Trigger: AACTGCAAGGGGCCAAAGCCAAAGATCTATCCGAGT...ACCTCCTGTCTCACAGCAGTGGGTACAGCCTGTGTGGGCGCAGGTGGTCCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR CAA 90 bp | GGATCTACTGTAGGGTTCTCCCTTCCTGTCACTAGATACGGTCACTaGAGGGAAAGATGGATCAGCTCAGCTGTGGACCCTCAGGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: GSTVGFSLPVTRYGH*RERWISSAVDPQEP Trigger: GGGCTCCTGAGGGTCCACAGCTGAGCTGATCCATCTTTCCCTCAAGTGACCGTATCTAGTGACAGGAAGGGAGAACCCTACAGTAGATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGGGCAGGAGTGTGCCAGTCTACTTGTCAGGGCACAGAAAAGGGACCACCTTTGGCTTTGGCCCCTTaGAGTTCTTTGTCCCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: CGAGVCQSTCQGTEKGPPLALAP*SSLSLA Trigger: AGCAAGGGACAAAGAACTGCAAGGGGCCAAAGCCAA...AGGTGGTCCCTTTTCTGTGCCCTGACAAGTAGACTGGCACACTCCTGCCCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGGACGTGGCTCCTTGGCCTCACGCTTAAGAGTCCTTATGGGCCACTGCTTTAAAGGGGGAGGGAGCTaGAGTGAACTGCAAACTGCA | + |
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Preference number: 2 (lower is better) Translates to: KGRGSLASRLRVLMGHCFKGGGS*SELQTA Trigger: TGCAGTTTGCAGTTCACTGCAGCTCCCTCCCCCTTT...AAAGCAGTGGCCCATAAGGACTCTTAAGCGTGAGGCCAAGGAGCCACGTCCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR CAA 90 bp | CCTGACAGTCAGCAGAGGCCCAGGTCCCTGAGTGTCAGGGCTAGTTaGGTCATGAATATCAGGTTAGAACTGGGCTGTCTTAAGGCACCT | + |
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Preference number: 2 (lower is better) Translates to: PDSQQRPRSLSVRAS*VMNIRLELGCLKAP Trigger: AGGTGCCTTAAGACAGCCCAGTTCTAACCTGATATTCATGACCAAACTAGCCCTGACACTCAGGGACCTGGGCCTCTGCTGACTGTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR-3UTR TCA 90 bp | TGGAACAAAGGCATCCAGGCAGAGCTAACAGAAGCAAGCCTACCTGCTGCAGAACTGTACCCACTGCTGTaGGACAGGAGGTGGATAACA | + |
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Preference number: 2 (lower is better) Translates to: WNKGIQAELTEASLPAAELYPLL*DRRWIT Trigger: TGTTATCCACCTCCTGTCTCACAGCAGTGGGTACAG...TTCTGCAGCAGGTAGGCTTGCTTCTGTTAGCTCTGCCTGGATGCCTTTGTTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAGGCAGGGGTCAGGAGGTCAAGGCCATCTTCAACTATATAGTAAGGTCAAGACAGGCTGTACCCACTaGTGTGAGACAGGAGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: LRQGSGGQGHLQLYSKVKTGCTH*CETGGG Trigger: TCCACCTCCTGTCTCACAGCAGTGGGTACAGCCTGT...CTTGACCTTACTATATAGTTGAAGATGGCCTTGACCTCCTGACCCCTGCCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR-3UTR GCA 90 bp | TCAGGTCCCACCTCCCAACCTTTGGGAAGAAAGGGTCTATTTTTAGACAGTATTGGTACCTGCAGCGGCTaGCAGCCTGAGGGACTGAAG | + |
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Preference number: 2 (lower is better) Translates to: SGPTSQPLGRKGLFLDSIGTCSG*QPEGLK Trigger: CTTCAGTCCCTCAGGCTGGCAGCCGCTGCAGGTACC...AATACTGTCTAAAAATAGACCCTTTCTTCCCAAAGGTTGGGAGGTGGGACCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR-3UTR GCA 90 bp | CTGAGGCAGGGGTCAGGAGGTCAAGGCCATCTTCAACTATATAGTAAGGTCAAGCAGCAGAGCCATGATTaGACTCTCCTCAAGCCGGAG | + |
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Preference number: 2 (lower is better) Translates to: LRQGSGGQGHLQLYSKVKQQSHD*TLLKPE Trigger: CTCCGGCTTGAGGAGAGTGCAATCATGGCTCTGCTG...CTTGACCTTACTATATAGTTGAAGATGGCCTTGACCTCCTGACCCCTGCCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGAGAGCATGGGAGGAAGGCCACACCCTCAGTCTCCAGAAGGGCATCACTTTTGAAGTAGCTAAATaGAAGGGTTTTGACGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: PERAWEEGHTLSLQKGITFEVAK*KGFDEG Trigger: GCCTTCGTCAAAACCCTTTCATTTAGCTACTTCAAA...AGTGATGCCCTTCTGGAGACTGAGGGTGTGGCCTTCCTCCCATGCTCTCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGGTCCCACCTCCCAACCTTTGGGAAGAAAGGGTCTATTTTTAGACAGTATTGGGAGGGAGCTGCAGTaGACTGCAAACTGCACCTGC | + |
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Preference number: 2 (lower is better) Translates to: SGPTSQPLGRKGLFLDSIGRELQ*TANCTC Trigger: GCAGGTGCAGTTTGCAGTTCACTGCAGCTCCCTCCC...AATACTGTCTAAAAATAGACCCTTTCTTCCCAAAGGTTGGGAGGTGGGACCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR-3UTR CCA 90 bp | AACAAAGGCATCCAGGCAGAGCTAACAGAAGCAAGCCTACCTGCTGCAGAAGGCACTCGGATAGATCTTTaGCTTTGGCCCCTTGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: NKGIQAELTEASLPAAEGTRIDL*LWPLAV Trigger: AACTGCAAGGGGCCAAAGCCAAAGATCTATCCGAGT...GCCTTCTGCAGCAGGTAGGCTTGCTTCTGTTAGCTCTGCCTGGATGCCTTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR CAA 90 bp | TGGGGTGTGGCTTCACTCCACTGCTCAGGTCCCACCTCCCAACCTTaGGGAAGAAAGGGTCTATTTTTAGACAGTATTCCCTCTATGCAT | + |
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Preference number: 2 (lower is better) Translates to: WGVASLHCSGPTSQP*GRKGLFLDSIPSMH Trigger: ATGCATAGAGGGAATACTGTCTAAAAATAGACCCTTTCTTCCCAAAGGTTGGGAGGTGGGACCTGAGCAGTGGAGTGAAGCCACACCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR-3UTR GCA 90 bp | TCAGGTCCCACCTCCCAACCTTTGGGAAGAAAGGGTCTATTTTTAGACAGTATTTGTGGGGCAGGAGTGTaGCAGTCTACTTGTCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: SGPTSQPLGRKGLFLDSICGAGV*QSTCQG Trigger: GCCCTGACAAGTAGACTGGCACACTCCTGCCCCACA...AATACTGTCTAAAAATAGACCCTTTCTTCCCAAAGGTTGGGAGGTGGGACCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR-3UTR CCA 90 bp | AGGCCTGATGCCTTCTGGAACAAAGGCATCCAGGCAGAGCTAACAGAAGCAAGCCGAGGAAGAAGCATATaGTCAGTTGAAGGAAGCACT | + |
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Preference number: 2 (lower is better) Translates to: RPDAFWNKGIQAELTEASRGRSI*SVEGST Trigger: AGTGCTTCCTTCAACTGACCATATGCTTCTTCCTCG...GCTTGCTTCTGTTAGCTCTGCCTGGATGCCTTTGTTCCAGAAGGCATCAGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGTCCCACCTCCCAACCTTTGGGAAGAAAGGGTCTATTTTTAGACAGTATTAGGCCTGATGCCTTCTaGAACAAAGGCATCCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SGPTSQPLGRKGLFLDSIRPDAF*NKGIQA Trigger: TGCCTGGATGCCTTTGTTCCAGAAGGCATCAGGCCT...AATACTGTCTAAAAATAGACCCTTTCTTCCCAAAGGTTGGGAGGTGGGACCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGCAGGGGTCAGGAGGTCAAGGCCATCTTCAACTATATAGTAAGGTCAAGTGGAAACAGGAAGCCTaGGCTCTTGTTCTATCACTA | + |
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Preference number: 2 (lower is better) Translates to: LRQGSGGQGHLQLYSKVKWKQEA*ALVLSL Trigger: TAGTGATAGAACAAGAGCCCAGGCTTCCTGTTTCCA...CTTGACCTTACTATATAGTTGAAGATGGCCTTGACCTCCTGACCCCTGCCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR-3UTR TCA 90 bp | CCAACCTTTGGGAAGAAAGGGTCTATTTTTAGACAGTATTCCCTCTATGCATTAAGCTCCCATGCCACATaGCTGGCTGCAGACAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: PTFGKKGSIFRQYSLYALSSHAT*LAADRR Trigger: CCTTCTGTCTGCAGCCAGTCATGTGGCATGGGAGCT...TAATGCATAGAGGGAATACTGTCTAAAAATAGACCCTTTCTTCCCAAAGGTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR-3UTR CCA 90 bp | CCAACCTTTGGGAAGAAAGGGTCTATTTTTAGACAGTATTCCCTCTATGCATTACACTTGAGGGAAAGATaGATCAGCTCAGCTGTGGAC | + |
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Preference number: 2 (lower is better) Translates to: PTFGKKGSIFRQYSLYALHLRER*ISSAVD Trigger: GTCCACAGCTGAGCTGATCCATCTTTCCCTCAAGTG...TAATGCATAGAGGGAATACTGTCTAAAAATAGACCCTTTCTTCCCAAAGGTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR TCA 72 bp | TCCTGGCCCTGGTATGGTGCTTCCCTCCCCAGGCCCTaGGGTCAAGTCAGGGGCTGCAGCAGGAGGCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: SWPWYGASLPRP*GQVRGCSRRQC Trigger: GCACTGCCTCCTGCTGCAGCCCCTGACTTGACCTCAGGGCCTGGGGAGGGAAGCACCATACCAGGGCCAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR GCA 72 bp | GACACGTCGGAGTTGGAGCTCCTGGCCCTGGTATGGTaGTTCCCTCCCCAGGCCCTGAGGTCAAGTCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: DTSELELLALVW*FPPQALRSSQG Trigger: CCCCTGACTTGACCTCAGGGCCTGGGGAGGGAAGCACCATACCAGGGCCAGGAGCTCCAACTCCGACGTGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR CCA 72 bp | GCTGACACGTCGGAGTTGGAGCTCCTGGCCCTGGTATaGTGCTTCCCTCCCCAGGCCCTGAGGTCAAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: ADTSELELLALV*CFPPQALRSSQ Trigger: CTGACTTGACCTCAGGGCCTGGGGAGGGAAGCACCATACCAGGGCCAGGAGCTCCAACTCCGACGTGTCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR GCA 72 bp | TGCAGTGAACTGCAAACTGCACCTGCCAAGGCTGGCTaGCCCACAGCTCCTCTCTACACTGCCTCCCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: CSELQTAPAKAG*PTAPLYTASPA Trigger: TGCTGGGGAGGCAGTGTAGAGAGGAGCTGTGGGGCAGCCAGCCTTGGCAGGTGCAGTTTGCAGTTCACTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR TCA 72 bp | AGGGCCTGCTGGCACCTGGTGCTTAGTCCCTACCTCTaGGTTCAAGAAAGGAGGCAGAGGGGAGGAACCCAG | + |
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Preference number: 3 (lower is better) Translates to: RACWHLVLSPYL*VQERRQRGGTQ Trigger: CTGGGTTCCTCCCCTCTGCCTCCTTTCTTGAACTCAGAGGTAGGGACTAAGCACCAGGTGCCAGCAGGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR GCA 72 bp | AGGCATCCAGGCAGAGCTAACAGAAGCAAGCCTACCTaGTGCAGAAGGCTGAGTGTGGGGCAGGAGTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: RHPGRANRSKPT*CRRLSVGQECA Trigger: GGCACACTCCTGCCCCACACTCAGCCTTCTGCAGCAGGTAGGCTTGCTTCTGTTAGCTCTGCCTGGATGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR CCA 72 bp | ACAGGCCATGAACCCTCCAAATGCAAGGCCGGCATTTaGGAGCTCTGGGGTAGAAGGGAGCCAGGCTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: TGHEPSKCKAGI*ELWGRREPGCS Trigger: AGAGCAGCCTGGCTCCCTTCTACCCCAGAGCTCCCAAATGCCGGCCTTGCATTTGGAGGGTTCATGGCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR GCA 72 bp | CCAGTCTACTTGTCAGGGCACAGAAAAGGGACCACCTaGGCCCACACAGGCTGTACCCACTGCTGTGAGACA | + |
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Preference number: 3 (lower is better) Translates to: PVYLSGHRKGTT*AHTGCTHCCET Trigger: TGTCTCACAGCAGTGGGTACAGCCTGTGTGGGCGCAGGTGGTCCCTTTTCTGTGCCCTGACAAGTAGACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR GCA 72 bp | CATCCAGGCAGAGCTAACAGAAGCAAGCCTACCTGCTaGAGAAGGCTGAGTGTGGGGCAGGAGTGTGCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: HPGRANRSKPTC*RRLSVGQECAS Trigger: ACTGGCACACTCCTGCCCCACACTCAGCCTTCTGCAGCAGGTAGGCTTGCTTCTGTTAGCTCTGCCTGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTGGAGCTCCTGGCCCTGGTATGGTGCTTCCCTCCCCAGGCCCTGAGGTCAAGTACAAAGCGCAGAGCTaGGCTGCATGGATTTTAATG | + |
|
Preference number: 3 (lower is better) Translates to: VGAPGPGMVLPSPGPEVKYKAQS*AAWILM Trigger: CATTAAAATCCATGCAGCCAAGCTCTGCGCTTTGTA...CTTGACCTCAGGGCCTGGGGAGGGAAGCACCATACCAGGGCCAGGAGCTCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
||
| 3UTR-3UTR CAA 90 bp | CTCACCCAGAGAGAGCATGGGAGGAAGGCCACACCCTCAGTCTCCAGAAGGGCACATGAGACTGTTAGTTaGTATGGAGGAAGGCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LTQREHGRKATPSVSRRAHETVS*YGGRQV Trigger: CACCTGCCTTCCTCCATACAAACTAACAGTCTCATG...TGCCCTTCTGGAGACTGAGGGTGTGGCCTTCCTCCCATGCTCTCTCTGGGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTCACCCAGAGAGAGCATGGGAGGAAGGCCACACCCTCAGTCTCCAGAAGGGCCATGAGACTGTTAGTTaGTATGGAGGAAGGCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: THPERAWEEGHTLSLQKGHETVS*YGGRQV Trigger: CACCTGCCTTCCTCCATACAAACTAACAGTCTCATG...GCCCTTCTGGAGACTGAGGGTGTGGCCTTCCTCCCATGCTCTCTCTGGGTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGATCAGCTCAGCTGTGGACCCTCAGGAGCCCGCAGGCAGACACGAGGAAGAAGATAGATCTTTGGCTTaGGCCCCTTGCAGTTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: WISSAVDPQEPAGRHEEEDRSLA*APCSSL Trigger: CAAAGAACTGCAAGGGGCCAAAGCCAAAGATCTATC...TTCTTCCTCGTGTCTGCCTGCGGGCTCCTGAGGGTCCACAGCTGAGCTGATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| 3UTR-3UTR CAA 90 bp | TCACCCAGAGAGAGCATGGGAGGAAGGCCACACCCTCAGTCTCCAGAAGGGCATGATAGATCTTTGGCTTaGGCCCCTTGCAGTTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SPRESMGGRPHPQSPEGHDRSLA*APCSSL Trigger: CAAAGAACTGCAAGGGGCCAAAGCCAAAGATCTATC...ATGCCCTTCTGGAGACTGAGGGTGTGGCCTTCCTCCCATGCTCTCTCTGGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| 3UTR TCA 72 bp | GACCACCTGCGCCCACACAGGCTGTACCCACTGCTGTaGGACAGGAGGTGGATAACATTATTTGAAGTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: DHLRPHRLYPLL*DRRWITLFEVA Trigger: AGCTACTTCAAATAATGTTATCCACCTCCTGTCTCACAGCAGTGGGTACAGCCTGTGTGGGCGCAGGTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| 3UTR CCA 72 bp | TCAGGAGCCCGCAGGCAGACACGAGGAAGAAGCATATaGTCAGTTGAAGGAAGCACTCGGATAGATCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SGARRQTRGRSI*SVEGSTRIDLW Trigger: CCAAAGATCTATCCGAGTGCTTCCTTCAACTGACCATATGCTTCTTCCTCGTGTCTGCCTGCGGGCTCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| 3UTR-3UTR CAA 90 bp | GCACTATCTCCAGTTGAAACCCAAGCAGAGGGATCTACTGTAGGGTTCTCCCTTTTTGGCTTTGGCCCCTaGCAGTTCTTTGTCCCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: ALSPVETQAEGSTVGFSLFGFGP*QFFVPC Trigger: GCAAGGGACAAAGAACTGCAAGGGGCCAAAGCCAAA...AAGGGAGAACCCTACAGTAGATCCCTCTGCTTGGGTTTCAACTGGAGATAGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGAACAAAGGCATCCAGGCAGAGCTAACAGAAGCAAGCCTACCTGCTGCAGAAAGGCACTATCTCCAGTaGAAACCCAAGCAGAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: WNKGIQAELTEASLPAAERHYLQ*KPKQRD Trigger: ATCCCTCTGCTTGGGTTTCAACTGGAGATAGTGCCT...TTCTGCAGCAGGTAGGCTTGCTTCTGTTAGCTCTGCCTGGATGCCTTTGTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| 3UTR GCA 72 bp | TCCTTGGCCTCACGCTTAAGAGTCCTTATGGGCCACTaGTTTATAGTCTTACCAGCCTCAGCCCAGTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLASRLRVLMGH*FIVLPASAQFK Trigger: TTTAAACTGGGCTGAGGCTGGTAAGACTATAAAGCAGTGGCCCATAAGGACTCTTAAGCGTGAGGCCAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
||
| 3UTR CCA 72 bp | TCAGTTGAAGGAAGCACTCGGATAGATCTTTGGCTTTaGCCCCTTGCAGTTCTTTGTCCCTTGCTTTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SVEGSTRIDLWL*PLAVLCPLLSS Trigger: GGAAGAAAGCAAGGGACAAAGAACTGCAAGGGGCCAAAGCCAAAGATCTATCCGAGTGCTTCCTTCAACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| 3UTR CCA 72 bp | ATATGGTCAGTTGAAGGAAGCACTCGGATAGATCTTTaGCTTTGGCCCCTTGCAGTTCTTTGTCCCTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: IWSVEGSTRIDL*LWPLAVLCPLL Trigger: AAGCAAGGGACAAAGAACTGCAAGGGGCCAAAGCCAAAGATCTATCCGAGTGCTTCCTTCAACTGACCATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| 3UTR CCA 72 bp | GTGCTCATTATTTGGTCCCAGGAAACACAGGTGACTTaGAAACAGGAAGCCTGGGCTCTTGTTCTATCACTA | + |
|
Preference number: 3 (lower is better) Translates to: VLIIWSQETQVT*KQEAWALVLSL Trigger: TAGTGATAGAACAAGAGCCCAGGCTTCCTGTTTCCAAGTCACCTGTGTTTCCTGGGACCAAATAATGAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
||
| CDS-3UTR CCA 90 bp | AAAGGGACCACCTGCGCCCACACAGGCTGTACCCACTGCTGTGAGACAGGAGGTGCCAGGCTTGGGACCTaGCGGAGAGCTCAGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGTTCAHTGCTHCCETGGARLGT*RRAQRR Trigger: CCTCCTCTGAGCTCTCCGCCAGGTCCCAAGCCTGGC...ACCTCCTGTCTCACAGCAGTGGGTACAGCCTGTGTGGGCGCAGGTGGTCCCTTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR CCA 90 bp | AAGATGGATCAGCTCAGCTGTGGACCCTCAGGAGCCCGCAGGCAGACACGAGGAGCCAGGCTTGGGACCTaGCGGAGAGCTCAGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KMDQLSCGPSGARRQTRGARLGT*RRAQRR Trigger: CCTCCTCTGAGCTCTCCGCCAGGTCCCAAGCCTGGC...TCCTCGTGTCTGCCTGCGGGCTCCTGAGGGTCCACAGCTGAGCTGATCCATCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGGACCACCTGCGCCCACACAGGCTGTACCCACTGCTGTGAGACAGGAGGTGGCAGAGTCCGACTGTaGTGGTGGTGGGTAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KGTTCAHTGCTHCCETGGGRVRL*WWWVAG Trigger: GCCAGCTACCCACCACCACCACAGTCGGACTCTGCC...ACCTCCTGTCTCACAGCAGTGGGTACAGCCTGTGTGGGCGCAGGTGGTCCCTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR CCA 90 bp | AAAGATGGATCAGCTCAGCTGTGGACCCTCAGGAGCCCGCAGGCAGACACGAGGAGGTGGAGGGGCAGGTaGAGGAGCGAAGCCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KDGSAQLWTLRSPQADTRRWRGR*RSEARL Trigger: AAGCCTGGCTTCGCTCCTCCACCTGCCCCTCCACCT...CCTCGTGTCTGCCTGCGGGCTCCTGAGGGTCCACAGCTGAGCTGATCCATCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR CCA 90 bp | AAGATGGATCAGCTCAGCTGTGGACCCTCAGGAGCCCGCAGGCAGACACGAGGAAGGTGGAGGGGCAGGTaGAGGAGCGAAGCCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KMDQLSCGPSGARRQTRGRWRGR*RSEARL Trigger: AAGCCTGGCTTCGCTCCTCCACCTGCCCCTCCACCT...TCCTCGTGTCTGCCTGCGGGCTCCTGAGGGTCCACAGCTGAGCTGATCCATCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR CCA 90 bp | ACCCAGAGAGAGCATGGGAGGAAGGCCACACCCTCAGTCTCCAGAAGGGCATCAAGAAGGTGGTGGTGGTaGTGGTGCAGCAGGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQREHGRKATPSVSRRASRRWWW*WCSRLA Trigger: GGCCAGCCTGCTGCACCACCACCACCACCACCTTCT...TGATGCCCTTCTGGAGACTGAGGGTGTGGCCTTCCTCCCATGCTCTCTCTGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR CCA 90 bp | ACTCACCCAGAGAGAGCATGGGAGGAAGGCCACACCCTCAGTCTCCAGAAGGGCCTCAGAAGGTGGTGGTaGTGGTGGTGCAGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: THPERAWEEGHTLSLQKGLRRWW*WWCSRL Trigger: CAGCCTGCTGCACCACCACCACCACCACCTTCTGAG...GCCCTTCTGGAGACTGAGGGTGTGGCCTTCCTCCCATGCTCTCTCTGGGTGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR CCA 90 bp | ACCCAGAGAGAGCATGGGAGGAAGGCCACACCCTCAGTCTCCAGAAGGGCATCAGGCCTCAGAAGGTGGTaGTGGTGGTGGTGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQREHGRKATPSVSRRASGLRRW*WWWCSR Trigger: CCTGCTGCACCACCACCACCACCACCTTCTGAGGCC...TGATGCCCTTCTGGAGACTGAGGGTGTGGCCTTCCTCCCATGCTCTCTCTGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGTGTGGGGCAGGAGTGTGCCAGTCTACTTGTCAGGGCACAGAAAAGGGACGGCCTCAGAAGGTGGTaGTGGTGGTGGTGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSVGQECASLLVRAQKRDGLRRW*WWWCSR Trigger: CCTGCTGCACCACCACCACCACCACCTTCTGAGGCC...GTCCCTTTTCTGTGCCCTGACAAGTAGACTGGCACACTCCTGCCCCACACTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR CCA 90 bp | ACTCACCCAGAGAGAGCATGGGAGGAAGGCCACACCCTCAGTCTCCAGAAGGGCTCCGACGGGACAGGATaGTGGCCACATCATTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: THPERAWEEGHTLSLQKGSDGTG*WPHHCP Trigger: TGGGCAATGATGTGGCCACCATCCTGTCCCGTCGGA...GCCCTTCTGGAGACTGAGGGTGTGGCCTTCCTCCCATGCTCTCTCTGGGTGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR CCA 90 bp | AGGCATCCAGGCAGAGCTAACAGAAGCAAGCCTACCTGCTGCAGAAGGCTGAGTAGAGTCCGACTGTGGTaGTGGTGGGTAGCTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RHPGRANRSKPTCCRRLSRVRLW*WWVAGR Trigger: GCGGCCAGCTACCCACCACCACCACAGTCGGACTCT...ACTCAGCCTTCTGCAGCAGGTAGGCTTGCTTCTGTTAGCTCTGCCTGGATGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR CCA 90 bp | CACAGAAAAGGGACCACCTGCGCCCACACAGGCTGTACCCACTGCTGTGAGACATCCGACGGGACAGGATaGTGGCCACATCATTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HRKGTTCAHTGCTHCCETSDGTG*WPHHCP Trigger: TGGGCAATGATGTGGCCACCATCCTGTCCCGTCGGA...TGTCTCACAGCAGTGGGTACAGCCTGTGTGGGCGCAGGTGGTCCCTTTTCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR CCA 90 bp | ACTCACCCAGAGAGAGCATGGGAGGAAGGCCACACCCTCAGTCTCCAGAAGGGCTCTGGTACACCAAGGTaGACGAATACCCAGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: THPERAWEEGHTLSLQKGSGTPR*TNTQKA Trigger: GGCCTTCTGGGTATTCGTCCACCTTGGTGTACCAGA...GCCCTTCTGGAGACTGAGGGTGTGGCCTTCCTCCCATGCTCTCTCTGGGTGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCTGATGCCTTCTGGAACAAAGGCATCCAGGCAGAGCTAACAGAAGCAAGCGAGCGAAGCCAGGCTTaGGACCTGGCGGAGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RPDAFWNKGIQAELTEASERSQA*DLAESS Trigger: TGAGCTCTCCGCCAGGTCCCAAGCCTGGCTTCGCTC...GCTTGCTTCTGTTAGCTCTGCCTGGATGCCTTTGTTCCAGAAGGCATCAGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCTGATGCCTTCTGGAACAAAGGCATCCAGGCAGAGCTAACAGAAGCAAGCGAGGTGGCACACTCATaGGAGGTGGAGGTGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RPDAFWNKGIQAELTEASEVAHS*EVEVEG Trigger: CCCCTCCACCTCCACCTCCCATGAGTGTGCCACCTC...GCTTGCTTCTGTTAGCTCTGCCTGGATGCCTTTGTTCCAGAAGGCATCAGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR CCA 90 bp | CTCACCCAGAGAGAGCATGGGAGGAAGGCCACACCCTCAGTCTCCAGAAGGGCACAGGCAATGAAGACTTaGGCTTGGTGGCCTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTQREHGRKATPSVSRRAQAMKT*AWWPQK Trigger: CTTCTGAGGCCACCAAGCCCAAGTCTTCATTGCCTG...TGCCCTTCTGGAGACTGAGGGTGTGGCCTTCCTCCCATGCTCTCTCTGGGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR GCA 90 bp | CTCACCCAGAGAGAGCATGGGAGGAAGGCCACACCCTCAGTCTCCAGAAGGGCAGGAGGCAAAGGCACTTaGCTGAGTACAAATCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTQREHGRKATPSVSRRAGGKGT*LSTNLS Trigger: GGAGAGATTTGTACTCAGGCAAGTGCCTTTGCCTCC...TGCCCTTCTGGAGACTGAGGGTGTGGCCTTCCTCCCATGCTCTCTCTGGGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR CCA 90 bp | TCACCCAGAGAGAGCATGGGAGGAAGGCCACACCCTCAGTCTCCAGAAGGGCATCAGGCAATGAAGACTTaGGCTTGGTGGCCTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPRESMGGRPHPQSPEGHQAMKT*AWWPQK Trigger: CTTCTGAGGCCACCAAGCCCAAGTCTTCATTGCCTG...ATGCCCTTCTGGAGACTGAGGGTGTGGCCTTCCTCCCATGCTCTCTCTGGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| 3UTR CAA 72 bp | CTAAGGCACGGGGTGGGAAACATGCACAGCATGGAGTaGACTGCCAAACCCGGTGCCAGACACTGGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRHGVGNMHSME*TAKPGARHWIW Trigger: CCAAATCCAGTGTCTGGCACCGGGTTTGGCAGTCAACTCCATGCTGTGCATGTTTCCCACCCCGTGCCTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
||
| CDS-3UTR GCA 90 bp | CCCAGAGAGAGCATGGGAGGAAGGCCACACCCTCAGTCTCCAGAAGGGCATCACTCCGAAAATGTCCTCTaGATACTTACTCAGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRESMGGRPHPQSPEGHHSENVL*ILTQAA Trigger: GGCAGCCTGAGTAAGTATGCAGAGGACATTTTCGGA...GTGATGCCCTTCTGGAGACTGAGGGTGTGGCCTTCCTCCCATGCTCTCTCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR GCA 90 bp | CTCACCCAGAGAGAGCATGGGAGGAAGGCCACACCCTCAGTCTCCAGAAGGGCATCCTCTTTGGTTGTCTaGAGGGTAGCTGAATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTQREHGRKATPSVSRRASSLVV*RVAEFC Trigger: GCAGAATTCAGCTACCCTGCAGACAACCAAAGAGGA...TGCCCTTCTGGAGACTGAGGGTGTGGCCTTCCTCCCATGCTCTCTCTGGGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR CCA 90 bp | GCACTATCTCCAGTTGAAACCCAAGCAGAGGGATCTACTGTAGGGTTCTCCCTTGAGGTGGCACACTCATaGGAGGTGGAGGTGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALSPVETQAEGSTVGFSLEVAHS*EVEVEG Trigger: CCCCTCCACCTCCACCTCCCATGAGTGTGCCACCTC...AAGGGAGAACCCTACAGTAGATCCCTCTGCTTGGGTTTCAACTGGAGATAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGGGCAGGAGTGTGCCAGTCTACTTGTCAGGGCACAGAAAAGGGACCACCTTTGGGACAAAGGAGGTaGTGGCATTGGGTAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CGAGVCQSTCQGTEKGPPLGQRR*WHWVVS Trigger: GCTGACTACCCAATGCCACCACCTCCTTTGTCCCAA...AGGTGGTCCCTTTTCTGTGCCCTGACAAGTAGACTGGCACACTCCTGCCCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR TCA 90 bp | ACCCAGAGAGAGCATGGGAGGAAGGCCACACCCTCAGTCTCCAGAAGGGCATCAGCAAAGGCACTTGCCTaGGTACAAATCTCTCCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TQREHGRKATPSVSRRASAKALA*VQISPK Trigger: TTTCGGAGAGATTTGTACTCAGGCAAGTGCCTTTGC...TGATGCCCTTCTGGAGACTGAGGGTGTGGCCTTCCTCCCATGCTCTCTCTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAGAGAGCATGGGAGGAAGGCCACACCCTCAGTCTCCAGAAGGGCATCACTTCCTCTTTGGTTGTCTaGAGGGTAGCTGAATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PERAWEEGHTLSLQKGITSSLVV*RVAEFC Trigger: GCAGAATTCAGCTACCCTGCAGACAACCAAAGAGGA...AGTGATGCCCTTCTGGAGACTGAGGGTGTGGCCTTCCTCCCATGCTCTCTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR GCA 90 bp | AGGCATCCAGGCAGAGCTAACAGAAGCAAGCCTACCTGCTGCAGAAGGCTGAGTTGGTGGCCACATCATTaGCCACCACATCACGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RHPGRANRSKPTCCRRLSWWPHH*PPHHAS Trigger: AGAAGCGTGATGTGGTGGGCAATGATGTGGCCACCA...ACTCAGCCTTCTGCAGCAGGTAGGCTTGCTTCTGTTAGCTCTGCCTGGATGCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR CCA 90 bp | AAGATGGATCAGCTCAGCTGTGGACCCTCAGGAGCCCGCAGGCAGACACGAGGACTGTCAAAGAGCTTCTaGTCTTGGGTGGTAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: KMDQLSCGPSGARRQTRGLSKSF*SWVVEL Trigger: AAGTTCTACCACCCAAGACCAGAAGCTCTTTGACAG...TCCTCGTGTCTGCCTGCGGGCTCCTGAGGGTCCACAGCTGAGCTGATCCATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR CCA 90 bp | GTTGAAGGAAGCACTCGGATAGATCTTTGGCTTTGGCCCCTTGCAGTTCTTTGTGGCAGAGTCCGACTGTaGTGGTGGTGGGTAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VEGSTRIDLWLWPLAVLCGRVRL*WWWVAG Trigger: GCCAGCTACCCACCACCACCACAGTCGGACTCTGCC...ACAAAGAACTGCAAGGGGCCAAAGCCAAAGATCTATCCGAGTGCTTCCTTCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR CCA 90 bp | AATAATAACACCCGTGTATCAGTTCTGGGAAGGGAGGTAAAGGGGGTGGGTCAGCTCAGAAGGTGGTGGTaGTGGTGGTGCAGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NNNTRVSVLGREVKGVGQLRRWW*WWCSRL Trigger: CAGCCTGCTGCACCACCACCACCACCACCTTCTGAG...CTGACCCACCCCCTTTACCTCCCTTCCCAGAACTGATACACGGGTGTTATTATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
||
| CDS-3UTR TCA 90 bp | ACTCACCCAGAGAGAGCATGGGAGGAAGGCCACACCCTCAGTCTCCAGAAGGGCTTCTCTTCTCTTTCATaGTATCCTTGGTGTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: THPERAWEEGHTLSLQKGFSSLS*YPWCPA Trigger: TGCAGGACACCAAGGATATCATGAAAGAGAAGAGAA...GCCCTTCTGGAGACTGAGGGTGTGGCCTTCCTCCCATGCTCTCTCTGGGTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGTGTGGGGCAGGAGTGTGCCAGTCTACTTGTCAGGGCACAGAAAAGGGACTCCGAAAATGTCCTCTaGATACTTACTCAGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSVGQECASLLVRAQKRDSENVL*ILTQAA Trigger: GGCAGCCTGAGTAAGTATGCAGAGGACATTTTCGGA...GTCCCTTTTCTGTGCCCTGACAAGTAGACTGGCACACTCCTGCCCCACACTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| CDS-3UTR GCA 90 bp | GCACTATCTCCAGTTGAAACCCAAGCAGAGGGATCTACTGTAGGGTTCTCCCTTCAGAAAGCAGGTCACTaGGCGCGTCACTCACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: ALSPVETQAEGSTVGFSLQKAGH*ARHSQQ Trigger: CTGCTGTGAGTGACGCGCGCAGTGACCTGCTTTCTG...AAGGGAGAACCCTACAGTAGATCCCTCTGCTTGGGTTTCAACTGGAGATAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| CDS-3UTR CCA 90 bp | ACCCAGAGAGAGCATGGGAGGAAGGCCACACCCTCAGTCTCCAGAAGGGCATCACTGTCAAAGAGCTTCTaGTCTTGGGTGGTAGAACTT | + |
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Preference number: 4 (lower is better) Translates to: TQREHGRKATPSVSRRASLSKSF*SWVVEL Trigger: AAGTTCTACCACCCAAGACCAGAAGCTCTTTGACAG...TGATGCCCTTCTGGAGACTGAGGGTGTGGCCTTCCTCCCATGCTCTCTCTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR CAA 72 bp | GTAGGGTTCTCCCTTCCTGTCACTAGATACGGTCACTaGAGGGAAAGATGGATCAGCTCAGCTGTGGACCCT | + |
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Preference number: 4 (lower is better) Translates to: VGFSLPVTRYGH*RERWISSAVDP Trigger: AGGGTCCACAGCTGAGCTGATCCATCTTTCCCTCAAGTGACCGTATCTAGTGACAGGAAGGGAGAACCCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR CAA 72 bp | CAGCAGAGGCCCAGGTCCCTGAGTGTCAGGGCTAGTTaGGTCATGAATATCAGGTTAGAACTGGGCTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: QQRPRSLSVRAS*VMNIRLELGCL Trigger: AAGACAGCCCAGTTCTAACCTGATATTCATGACCAAACTAGCCCTGACACTCAGGGACCTGGGCCTCTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| CDS-3UTR TCA 90 bp | CACAGAAAAGGGACCACCTGCGCCCACACAGGCTGTACCCACTGCTGTGAGACATTCTCTTCTCTTTCATaGTATCCTTGGTGTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: HRKGTTCAHTGCTHCCETFSSLS*YPWCPA Trigger: TGCAGGACACCAAGGATATCATGAAAGAGAAGAGAA...TGTCTCACAGCAGTGGGTACAGCCTGTGTGGGCGCAGGTGGTCCCTTTTCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| CDS-3UTR GCA 90 bp | GTTGAAGGAAGCACTCGGATAGATCTTTGGCTTTGGCCCCTTGCAGTTCTTTGTCAGAAAGCAGGTCACTaGGCGCGTCACTCACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: VEGSTRIDLWLWPLAVLCQKAGH*ARHSQQ Trigger: CTGCTGTGAGTGACGCGCGCAGTGACCTGCTTTCTG...ACAAAGAACTGCAAGGGGCCAAAGCCAAAGATCTATCCGAGTGCTTCCTTCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| CDS-3UTR CCA 90 bp | TCAGGTCCCACCTCCCAACCTTTGGGAAGAAAGGGTCTATTTTTAGACAGTATTGAGCGAAGCCAGGCTTaGGACCTGGCGGAGAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: SGPTSQPLGRKGLFLDSIERSQA*DLAESS Trigger: TGAGCTCTCCGCCAGGTCCCAAGCCTGGCTTCGCTC...AATACTGTCTAAAAATAGACCCTTTCTTCCCAAAGGTTGGGAGGTGGGACCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| CDS-3UTR CCA 90 bp | TCAGGTCCCACCTCCCAACCTTTGGGAAGAAAGGGTCTATTTTTAGACAGTATTAGAAGGTGGTGGTGGTaGTGGTGCAGCAGGCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: SGPTSQPLGRKGLFLDSIRRWWW*WCSRLA Trigger: GGCCAGCCTGCTGCACCACCACCACCACCACCTTCT...AATACTGTCTAAAAATAGACCCTTTCTTCCCAAAGGTTGGGAGGTGGGACCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| CDS-3UTR TCA 90 bp | CTGGAACAAAGGCATCCAGGCAGAGCTAACAGAAGCAAGCCTACCTGCTGCAGAGCAAAGGCACTTGCCTaGGTACAAATCTCTCCGAAA | + |
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Preference number: 4 (lower is better) Translates to: LEQRHPGRANRSKPTCCRAKALA*VQISPK Trigger: TTTCGGAGAGATTTGTACTCAGGCAAGTGCCTTTGC...TCTGCAGCAGGTAGGCTTGCTTCTGTTAGCTCTGCCTGGATGCCTTTGTTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| CDS-3UTR GCA 90 bp | TGGAACAAAGGCATCCAGGCAGAGCTAACAGAAGCAAGCCTACCTGCTGCAGAAGGAGGCAAAGGCACTTaGCTGAGTACAAATCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: WNKGIQAELTEASLPAAEGGKGT*LSTNLS Trigger: GGAGAGATTTGTACTCAGGCAAGTGCCTTTGCCTCC...TTCTGCAGCAGGTAGGCTTGCTTCTGTTAGCTCTGCCTGGATGCCTTTGTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| CDS-3UTR GCA 90 bp | GCACTATCTCCAGTTGAAACCCAAGCAGAGGGATCTACTGTAGGGTTCTCCCTTTGGTGGCCACATCATTaGCCACCACATCACGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: ALSPVETQAEGSTVGFSLWWPHH*PPHHAS Trigger: AGAAGCGTGATGTGGTGGGCAATGATGTGGCCACCA...AAGGGAGAACCCTACAGTAGATCCCTCTGCTTGGGTTTCAACTGGAGATAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| CDS-3UTR CCA 90 bp | GCACTATCTCCAGTTGAAACCCAAGCAGAGGGATCTACTGTAGGGTTCTCCCTTTTGGGACAAAGGAGGTaGTGGCATTGGGTAGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: ALSPVETQAEGSTVGFSLLGQRR*WHWVVS Trigger: GCTGACTACCCAATGCCACCACCTCCTTTGTCCCAA...AAGGGAGAACCCTACAGTAGATCCCTCTGCTTGGGTTTCAACTGGAGATAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| CDS-3UTR CCA 90 bp | AGAAGCATATGGTCAGTTGAAGGAAGCACTCGGATAGATCTTTGGCTTTGGCCCTCTGGTACACCAAGGTaGACGAATACCCAGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RSIWSVEGSTRIDLWLWPSGTPR*TNTQKA Trigger: GGCCTTCTGGGTATTCGTCCACCTTGGTGTACCAGA...GGGCCAAAGCCAAAGATCTATCCGAGTGCTTCCTTCAACTGACCATATGCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| 3UTR CAA 72 bp | GCTTCACTCCACTGCTCAGGTCCCACCTCCCAACCTTaGGGAAGAAAGGGTCTATTTTTAGACAGTATTCCC | + |
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Preference number: 4 (lower is better) Translates to: ASLHCSGPTSQP*GRKGLFLDSIP Trigger: GGGAATACTGTCTAAAAATAGACCCTTTCTTCCCAAAGGTTGGGAGGTGGGACCTGAGCAGTGGAGTGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| 3UTR CAA 72 bp | GGTGCTCATTATTTGGTCCCAGGAAACACAGGTGACTaGGAAACAGGAAGCCTGGGCTCTTGTTCTATCACT | + |
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Preference number: 4 (lower is better) Translates to: GAHYLVPGNTGD*ETGSLGSCSIT Trigger: AGTGATAGAACAAGAGCCCAGGCTTCCTGTTTCCAAGTCACCTGTGTTTCCTGGGACCAAATAATGAGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| CDS-3UTR GCA 90 bp | CTGAAGTTTCTACAGCTGGCACAACCTCTGCTTAAATTGAGGAAACAAAAGGGGATATCCTTGGTGTCCTaGAGCATCTTCTCCTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: LKFLQLAQPLLKLRKQKGISLVS*SIFSFQ Trigger: TTGGAAGGAGAAGATGCTGCAGGACACCAAGGATAT...CCCCTTTTGTTTCCTCAATTTAAGCAGAGGTTGTGCCAGCTGTAGAAACTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| CDS CCA 90 bp | GGCTTGGTGGCCTCAGAAGGTGGTGGTGGTGGTGGTGCAGCAGGCTaGCCATCAGCACCGCTGAAGGGGAGAGGCGGGGGCCCTGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: GLVASEGGGGGGAAG*PSAPLKGRGGGPGG Trigger: CCCTCCAGGGCCCCCGCCTCTCCCCTTCAGCGGTGCTGATGGCCAGCCTGCTGCACCACCACCACCACCACCTTCTGAGGCCACCAAGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| CDS CCA 90 bp | AAAGCAGGTCACTGCGCGCGTCACTCACAGCAGGCAATGAAGACTTaGGCTTGGTGGCCTCAGAAGGTGGTGGTGGTGGTGGTGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: KAGHCARHSQQAMKT*AWWPQKVVVVVVQQ Trigger: CTGCTGCACCACCACCACCACCACCTTCTGAGGCCACCAAGCCCAAGTCTTCATTGCCTGCTGTGAGTGACGCGCGCAGTGACCTGCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| CDS-3UTR CAA 90 bp | CCAGAGAGAGCATGGGAGGAAGGCCACACCCTCAGTCTCCAGAAGGGCATCACTGGGAGGCAAAGGCACTaGCCTGAGTACAAATCTCTC | + |
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Preference number: 5 (lower is better) Translates to: PERAWEEGHTLSLQKGITGRQRH*PEYKSL Trigger: GAGAGATTTGTACTCAGGCAAGTGCCTTTGCCTCCC...AGTGATGCCCTTCTGGAGACTGAGGGTGTGGCCTTCCTCCCATGCTCTCTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| CDS-3UTR CAA 90 bp | TCACCCAGAGAGAGCATGGGAGGAAGGCCACACCCTCAGTCTCCAGAAGGGCATGGGAGGCAAAGGCACTaGCCTGAGTACAAATCTCTC | + |
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Preference number: 5 (lower is better) Translates to: SPRESMGGRPHPQSPEGHGRQRH*PEYKSL Trigger: GAGAGATTTGTACTCAGGCAAGTGCCTTTGCCTCCC...ATGCCCTTCTGGAGACTGAGGGTGTGGCCTTCCTCCCATGCTCTCTCTGGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| CDS-3UTR CAA 90 bp | GGAAGGGAGGTAAAGGGGGTGGGTCAGCATCATCATGCACAGCAAGGTGGTGAGGGACTCTACAAATTCTaGTCCCATTTTCATCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: GREVKGVGQHHHAQQGGEGLYKF*SHFHLL Trigger: GAGAAGATGAAAATGGGACAAGAATTTGTAGAGTCC...CTCACCACCTTGCTGTGCATGATGATGCTGACCCACCCCCTTTACCTCCCTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| CDS-3UTR CAA 90 bp | CTGAGTGTGGGGCAGGAGTGTGCCAGTCTACTTGTCAGGGCACAGAAAAGGGACGGACTCTACAAATTCTaGTCCCATTTTCATCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LSVGQECASLLVRAQKRDGLYKF*SHFHLL Trigger: GAGAAGATGAAAATGGGACAAGAATTTGTAGAGTCC...GTCCCTTTTCTGTGCCCTGACAAGTAGACTGGCACACTCCTGCCCCACACTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| CDS-3UTR CAA 90 bp | TCAGGTCCCACCTCCCAACCTTTGGGAAGAAAGGGTCTATTTTTAGACAGTATTAATGAAGACTTGGGCTaGGTGGCCTCAGAAGGTGGT | + |
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Preference number: 5 (lower is better) Translates to: SGPTSQPLGRKGLFLDSINEDLG*VASEGG Trigger: ACCACCTTCTGAGGCCACCAAGCCCAAGTCTTCATT...AATACTGTCTAAAAATAGACCCTTTCTTCCCAAAGGTTGGGAGGTGGGACCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084241.12 |
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| CDS CAA 90 bp | AGGTCACTGCGCGCGTCACTCACAGCAGGCAATGAAGACTTGGGCTaGGTGGCCTCAGAAGGTGGTGGTGGTGGTGGTGCAGCAGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RSLRASLTAGNEDLG*VASEGGGGGGAAGW Trigger: CCAGCCTGCTGCACCACCACCACCACCACCTTCTGAGGCCACCAAGCCCAAGTCTTCATTGCCTGCTGTGAGTGACGCGCGCAGTGACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| CDS CAA 72 bp | CGCGCGTCACTCACAGCAGGCAATGAAGACTTGGGCTaGGTGGCCTCAGAAGGTGGTGGTGGTGGTGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: RASLTAGNEDLG*VASEGGGGGGA Trigger: TGCACCACCACCACCACCACCTTCTGAGGCCACCAAGCCCAAGTCTTCATTGCCTGCTGTGAGTGACGCGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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| CDS TCA 72 bp | TTCTCTTGCTCCCGTTGCTCTTCAACCCTTCGCAGCTaGAAGCCTTGGCGAATGGCAGAAAGCAGGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: FSCSRCSSTLRS*KPWRMAESRSL Trigger: CAGTGACCTGCTTTCTGCCATTCGCCAAGGCTTTCAGCTGCGAAGGGTTGAAGAGCAACGGGAGCAAGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084241.12 ENSMUST00000105912.2 |
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