Pregenerated sensors for WASF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019831Ensembl transcript IDs: ENSMUST00000019975.14, ENSMUST00000105509.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATTTTCAAAGAACAAGCGCCACGAGGGACATGTGCATTCAGCCTTaGAATACAGAGCAAGGCGGCTGTCTTACTCCATCCAGTCTACTT | + |
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Preference number: 1 (lower is better) Translates to: HFQRTSATRDMCIQP*NTEQGGCLTPSSLL Trigger: AAGTAGACTGGATGGAGTAAGACAGCCGCCTTGCTCTGTATTGCAAGGCTGAATGCACATGTCCCTCGTGGCGCTTGTTCTTTGAAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| 3UTR CCA 90 bp | TTAAACTTCTATAGGCAAGCAAAACTGTACCACACAATATATAAGTaGGAAGGGGTTCTGCTAAACGTTCAAATAAGGCAAGTATTCAAA | + |
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Preference number: 1 (lower is better) Translates to: LNFYRQAKLYHTIYK*EGVLLNVQIRQVFK Trigger: TTTGAATACTTGCCTTATTTGAACGTTTAGCAGAACCCCTTCCCACTTATATATTGTGTGGTACAGTTTTGCTTGCCTATAGAAGTTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| 3UTR CAA 90 bp | ACATTTTCAAAGAACAAGCGCCACGAGGGACATGTGCATTCAGCCTaGCAATACAGAGCAAGGCGGCTGTCTTACTCCATCCAGTCTACT | + |
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Preference number: 2 (lower is better) Translates to: TFSKNKRHEGHVHSA*QYRARRLSYSIQST Trigger: AGTAGACTGGATGGAGTAAGACAGCCGCCTTGCTCTGTATTGCAAGGCTGAATGCACATGTCCCTCGTGGCGCTTGTTCTTTGAAAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCCAGACACAGCTGCCTTCAAGATTCCAGTCTCAGTTGCGTTCTTCAAATTTATGTGCATTCAGCCTTaGAATACAGAGCAAGGCGGC | + |
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Preference number: 2 (lower is better) Translates to: FPDTAAFKIPVSVAFFKFMCIQP*NTEQGG Trigger: GCCGCCTTGCTCTGTATTGCAAGGCTGAATGCACAT...AAATTTGAAGAACGCAACTGAGACTGGAATCTTGAAGGCAGCTGTGTCTGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCTAACCATTCCTTTAAGAGAATTCAACACTACAAGCTACATGTTCCTTCTGGTTCCCAGACACAGCTaGCTTCAAGATTCCAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: KLTIPLREFNTTSYMFLLVPRHS*LQDSSL Trigger: GAGACTGGAATCTTGAAGGCAGCTGTGTCTGGGAAC...CAGAAGGAACATGTAGCTTGTAGTGTTGAATTCTCTTAAAGGAATGGTTAGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| 3UTR CCA 72 bp | TATAGGCAAGCAAAACTGTACCACACAATATATAAGTaGGAAGGGGTTCTGCTAAACGTTCAAATAAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: YRQAKLYHTIYK*EGVLLNVQIRQ Trigger: TTGCCTTATTTGAACGTTTAGCAGAACCCCTTCCCACTTATATATTGTGTGGTACAGTTTTGCTTGCCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CCA 90 bp | GCCACGAGGGACATGTGCATTCAGCCTTGCAATACAGAGCAAGGCGGCTGTCTTGGGCCTGCAAAGCAGTaGCTGGGGGAGGAGGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: ATRDMCIQPCNTEQGGCLGPAKQ*LGEEAE Trigger: CTCCGCCTCCTCCCCCAGCCACTGCTTTGCAGGCCC...AAGACAGCCGCCTTGCTCTGTATTGCAAGGCTGAATGCACATGTCCCTCGTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CCA 90 bp | GCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTGGGCCTGCAAAGCAGTaGCTGGGGGAGGAGGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: ARRLSYSIQSTSSNSESSGPAKQ*LGEEAE Trigger: CTCCGCCTCCTCCCCCAGCCACTGCTTTGCAGGCCC...AGATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CCA 90 bp | AGCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCAAGAGGAGCCGGAGGTaGGGGCACTGCTGGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SKAAVLLHPVYFIELRVIKRSRR*GHCWGL Trigger: CAGGCCCCAGCAGTGCCCCCACCTCCGGCTCCTCTT...GATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR TCA 90 bp | GCCACGAGGGACATGTGCATTCAGCCTTGCAATACAGAGCAAGGCGGCTGTCTTGGAGGAGGAGCTGGGTaGAGAACACCAGGGGCAATC | + |
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Preference number: 4 (lower is better) Translates to: ATRDMCIQPCNTEQGGCLGGGAG*RTPGAI Trigger: GATTGCCCCTGGTGTTCTTCACCCAGCTCCTCCTCC...AAGACAGCCGCCTTGCTCTGTATTGCAAGGCTGAATGCACATGTCCCTCGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR GCA 90 bp | AGGGACATGTGCATTCAGCCTTGCAATACAGAGCAAGGCGGCTGTCTTACTCCACCTTGGGCCAGCTTCTaGCATTCCCGCCGCCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: RDMCIQPCNTEQGGCLTPPWASF*HSRRLS Trigger: TGACAGGCGGCGGGAATGGCAGAAGCTGGCCCAAGG...TGGAGTAAGACAGCCGCCTTGCTCTGTATTGCAAGGCTGAATGCACATGTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR GCA 90 bp | AGCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCCCTTGGGCCAGCTTCTaGCATTCCCGCCGCCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: SKAAVLLHPVYFIELRVIPWASF*HSRRLS Trigger: TGACAGGCGGCGGGAATGGCAGAAGCTGGCCCAAGG...GATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR GCA 90 bp | TCAAAGAACAAGCGCCACGAGGGACATGTGCATTCAGCCTTGCAATACAGAGCAGGCACTGCTGGGGCCTaGAAAGCAGTGGCTGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: SKNKRHEGHVHSALQYRAGTAGA*KAVAGG Trigger: TCCCCCAGCCACTGCTTTGCAGGCCCCAGCAGTGCC...TGCTCTGTATTGCAAGGCTGAATGCACATGTCCCTCGTGGCGCTTGTTCTTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR GCA 90 bp | AGCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCGGTGGAGGCAGCCCCTaGACTTCACCTTGCGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: SKAAVLLHPVYFIELRVIGGGSP*TSPCGS Trigger: ACTCCCGCAAGGTGAAGTGCAGGGGCTGCCTCCACC...GATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CCA 90 bp | GCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTCTGGGCAGTGCTGTGTaGCACAAGTGCCGAGGGTCG | + |
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Preference number: 4 (lower is better) Translates to: ARRLSYSIQSTSSNSESSLGSAV*HKCRGS Trigger: CGACCCTCGGCACTTGTGCCACACAGCACTGCCCAG...AGATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR TCA 90 bp | GCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTTCCCGCCGCCTGTCATaGGGTGCTCTTGGCACTTTC | + |
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Preference number: 4 (lower is better) Translates to: ARRLSYSIQSTSSNSESSSRRLS*GALGTF Trigger: GAAAGTGCCAAGAGCACCTCATGACAGGCGGCGGGA...AGATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR GCA 90 bp | CCATCCAGTCTACTTCATCGAACTCCGAGTCATCTTCCAAGTCACTGTGGCTTTGGCACTGCTGGGGCCTaGAAAGCAGTGGCTGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: PSSLLHRTPSHLPSHCGFGTAGA*KAVAGG Trigger: TCCCCCAGCCACTGCTTTGCAGGCCCCAGCAGTGCC...AAAGCCACAGTGACTTGGAAGATGACTCGGAGTTCGATGAAGTAGACTGGATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CCA 90 bp | CCATCCAGTCTACTTCATCGAACTCCGAGTCATCTTCCAAGTCACTGTGGCTTTCTGCAAAGCAGTGGCTaGGGGAGGAGGCGGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PSSLLHRTPSHLPSHCGFLQSSG*GRRRRR Trigger: CCTCCTCCGCCTCCTCCCCCAGCCACTGCTTTGCAG...AAAGCCACAGTGACTTGGAAGATGACTCGGAGTTCGATGAAGTAGACTGGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CCA 90 bp | AGGGACATGTGCATTCAGCCTTGCAATACAGAGCAAGGCGGCTGTCTTACTCCAGGCAGGGTGGATGGATaGCGCTTTGGCTCAGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: RDMCIQPCNTEQGGCLTPGRVDG*RFGSEA Trigger: TGCCTCTGAGCCAAAGCGCCATCCATCCACCCTGCC...TGGAGTAAGACAGCCGCCTTGCTCTGTATTGCAAGGCTGAATGCACATGTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR GCA 90 bp | CCTTGCAATACAGAGCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAAATGCCCCTGGGCAGTaGTGTGTGGCACAAGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: PCNTEQGGCLTPSSLLHRNAPGQ*CVAQVP Trigger: CGGCACTTGTGCCACACAGCACTGCCCAGGGGCATT...TCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGCTCTGTATTGCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CCA 90 bp | GCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTGGCGGAGGAGGTTCATaGGGTCTGACTAAGACCCTC | + |
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Preference number: 4 (lower is better) Translates to: ARRLSYSIQSTSSNSESSGGGGS*GLTKTL Trigger: GAGGGTCTTAGTCAGACCCCATGAACCTCCTCCGCC...AGATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CCA 90 bp | CCTTGCAATACAGAGCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGATGTTCTGCCTGCAGCTaGGGACTGGGGGCGATTCTC | + |
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Preference number: 4 (lower is better) Translates to: PCNTEQGGCLTPSSLLHRCSACS*GLGAIL Trigger: GAGAATCGCCCCCAGTCCCCAGCTGCAGGCAGAACA...TCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGCTCTGTATTGCAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CCA 90 bp | TCAAAGAACAAGCGCCACGAGGGACATGTGCATTCAGCCTTGCAATACAGAGCATGTTCTGCCTGCAGCTaGGGACTGGGGGCGATTCTC | + |
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Preference number: 4 (lower is better) Translates to: SKNKRHEGHVHSALQYRACSACS*GLGAIL Trigger: GAGAATCGCCCCCAGTCCCCAGCTGCAGGCAGAACA...TGCTCTGTATTGCAAGGCTGAATGCACATGTCCCTCGTGGCGCTTGTTCTTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CCA 90 bp | TTCCCAGACACAGCTGCCTTCAAGATTCCAGTCTCAGTTGCGTTCTTCAAATTTAAGAGGAGCCGGAGGTaGGGGCACTGCTGGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: FPDTAAFKIPVSVAFFKFKRSRR*GHCWGL Trigger: CAGGCCCCAGCAGTGCCCCCACCTCCGGCTCCTCTT...AAATTTGAAGAACGCAACTGAGACTGGAATCTTGAAGGCAGCTGTGTCTGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CCA 90 bp | TCAAAGAACAAGCGCCACGAGGGACATGTGCATTCAGCCTTGCAATACAGAGCAACCCGGGGCAGTAGATaGTGCTGGATGGAGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: SKNKRHEGHVHSALQYRATRGSR*CWMEPR Trigger: TCTGGGCTCCATCCAGCACCATCTACTGCCCCGGGT...TGCTCTGTATTGCAAGGCTGAATGCACATGTCCCTCGTGGCGCTTGTTCTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR GCA 90 bp | TCAAAGAACAAGCGCCACGAGGGACATGTGCATTCAGCCTTGCAATACAGAGCAGCATCTCCTGCTCCATaGATTGGTGGAGGCGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: SKNKRHEGHVHSALQYRAASPAP*IGGGGG Trigger: TCCTCCGCCTCCACCAATGCATGGAGCAGGAGATGC...TGCTCTGTATTGCAAGGCTGAATGCACATGTCCCTCGTGGCGCTTGTTCTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR GCA 90 bp | GCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTGGTGGGTGTGGGCTTTaGATCTCCTGCTCCATGCAT | + |
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Preference number: 4 (lower is better) Translates to: ARRLSYSIQSTSSNSESSGGCGL*ISCSMH Trigger: ATGCATGGAGCAGGAGATGCAAAGCCCACACCCACC...AGATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR GCA 90 bp | GCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTACTGGGGGAGAGGGCTaGACTAGAGGAGGAGCAATT | + |
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Preference number: 4 (lower is better) Translates to: ARRLSYSIQSTSSNSESSTGGEG*TRGGAI Trigger: AATTGCTCCTCCTCTAGTGCAGCCCTCTCCCCCAGT...AGATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CCA 90 bp | GCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTTGCTCCATGCATTGGTaGAGGCGGAGGAGGTTCATG | + |
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Preference number: 4 (lower is better) Translates to: ARRLSYSIQSTSSNSESSCSMHW*RRRRFM Trigger: CATGAACCTCCTCCGCCTCCACCAATGCATGGAGCA...AGATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CCA 90 bp | AGGGACATGTGCATTCAGCCTTGCAATACAGAGCAAGGCGGCTGTCTTACTCCAGGCATTAATGGAGCATaGGGACCCGGGGCAGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: RDMCIQPCNTEQGGCLTPGINGA*GPGAVD Trigger: ATCTACTGCCCCGGGTCCCCATGCTCCATTAATGCC...TGGAGTAAGACAGCCGCCTTGCTCTGTATTGCAAGGCTGAATGCACATGTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CCA 90 bp | AGCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTACAGGCAGGGTGGATaGATGGCGCTTTGGCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: SKAAVLLHPVYFIELRVIYRQGG*MALWLR Trigger: TCTGAGCCAAAGCGCCATCCATCCACCCTGCCTGTA...GATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| 3UTR CAA 72 bp | AAGAACAAGCGCCACGAGGGACATGTGCATTCAGCCTaGCAATACAGAGCAAGGCGGCTGTCTTACTCCATC | + |
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Preference number: 4 (lower is better) Translates to: KNKRHEGHVHSA*QYRARRLSYSI Trigger: GATGGAGTAAGACAGCCGCCTTGCTCTGTATTGCAAGGCTGAATGCACATGTCCCTCGTGGCGCTTGTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR TCA 90 bp | AGCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTGGCAAGGCAGAGAGTaGGTACGATCCGTCCATATG | + |
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Preference number: 4 (lower is better) Translates to: SKAAVLLHPVYFIELRVIWQGRE*VRSVHM Trigger: CATATGGACGGATCGTACTCACTCTCTGCCTTGCCA...GATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR GCA 90 bp | AGGGACATGTGCATTCAGCCTTGCAATACAGAGCAAGGCGGCTGTCTTACTCCAGCTGTGTGGCACAAGTaGCGAGGGTCGATGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: RDMCIQPCNTEQGGCLTPAVWHK*RGSMFL Trigger: AAGAAACATCGACCCTCGGCACTTGTGCCACACAGC...TGGAGTAAGACAGCCGCCTTGCTCTGTATTGCAAGGCTGAATGCACATGTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR GCA 90 bp | CCTTGCAATACAGAGCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGACCGCCTGTCATGAGGTaGTCTTGGCACTTTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: PCNTEQGGCLTPSSLLHRPPVMR*SWHFLW Trigger: CCAGAGAAAGTGCCAAGAGCACCTCATGACAGGCGG...TCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGCTCTGTATTGCAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR GCA 90 bp | CCTTGCAATACAGAGCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAGGGCTTTGCATCTCCTaGTCCATGCATTGGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PCNTEQGGCLTPSSLLHRGLCIS*SMHWWR Trigger: CCTCCACCAATGCATGGAGCAGGAGATGCAAAGCCC...TCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGCTCTGTATTGCAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR GCA 90 bp | TCAAAGAACAAGCGCCACGAGGGACATGTGCATTCAGCCTTGCAATACAGAGCAGGTGGGTGTGGGCTTTaGATCTCCTGCTCCATGCAT | + |
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Preference number: 4 (lower is better) Translates to: SKNKRHEGHVHSALQYRAGGCGL*ISCSMH Trigger: ATGCATGGAGCAGGAGATGCAAAGCCCACACCCACC...TGCTCTGTATTGCAAGGCTGAATGCACATGTCCCTCGTGGCGCTTGTTCTTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR GCA 90 bp | AGGGACATGTGCATTCAGCCTTGCAATACAGAGCAAGGCGGCTGTCTTACTCCACAGCAGCACACTCCTTaGGTCACTGATTACAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RDMCIQPCNTEQGGCLTPQQHTP*VTDYRQ Trigger: CTGCCTGTAATCAGTGACGCAAGGAGTGTGCTGCTG...TGGAGTAAGACAGCCGCCTTGCTCTGTATTGCAAGGCTGAATGCACATGTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR GCA 90 bp | GCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTCAGCAGCACACTCCTTaGGTCACTGATTACAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: ARRLSYSIQSTSSNSESSQQHTP*VTDYRQ Trigger: CTGCCTGTAATCAGTGACGCAAGGAGTGTGCTGCTG...AGATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CCA 90 bp | CCATCCAGTCTACTTCATCGAACTCCGAGTCATCTTCCAAGTCACTGTGGCTTTGGCGGAGGAGGTTCATaGGGTCTGACTAAGACCCTC | + |
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Preference number: 4 (lower is better) Translates to: PSSLLHRTPSHLPSHCGFGGGGS*GLTKTL Trigger: GAGGGTCTTAGTCAGACCCCATGAACCTCCTCCGCC...AAAGCCACAGTGACTTGGAAGATGACTCGGAGTTCGATGAAGTAGACTGGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CCA 90 bp | CCTTGCAATACAGAGCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAGGCATTAATGGAGCATaGGGACCCGGGGCAGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: PCNTEQGGCLTPSSLLHRGINGA*GPGAVD Trigger: ATCTACTGCCCCGGGTCCCCATGCTCCATTAATGCC...TCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGCTCTGTATTGCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CCA 90 bp | TCAAAGAACAAGCGCCACGAGGGACATGTGCATTCAGCCTTGCAATACAGAGCAGGCGAGACAGGATGGTaGCCACGTCGTTTTCAATCC | + |
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Preference number: 4 (lower is better) Translates to: SKNKRHEGHVHSALQYRAGETGW*PRRFQS Trigger: GGATTGAAAACGACGTGGCCACCATCCTGTCTCGCC...TGCTCTGTATTGCAAGGCTGAATGCACATGTCCCTCGTGGCGCTTGTTCTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CCA 90 bp | CCTTGCAATACAGAGCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAGGCGAGACAGGATGGTaGCCACGTCGTTTTCAATCC | + |
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Preference number: 4 (lower is better) Translates to: PCNTEQGGCLTPSSLLHRGETGW*PRRFQS Trigger: GGATTGAAAACGACGTGGCCACCATCCTGTCTCGCC...TCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGCTCTGTATTGCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR TCA 90 bp | TTCCCAGACACAGCTGCCTTCAAGATTCCAGTCTCAGTTGCGTTCTTCAAATTTTCCCGCCGCCTGTCATaGGGTGCTCTTGGCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPDTAAFKIPVSVAFFKFSRRLS*GALGTF Trigger: GAAAGTGCCAAGAGCACCTCATGACAGGCGGCGGGA...AAATTTGAAGAACGCAACTGAGACTGGAATCTTGAAGGCAGCTGTGTCTGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR TCA 90 bp | GCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTTACGATCCGTCCATATaGTCCACGTATGTCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ARRLSYSIQSTSSNSESSYDPSI*STYVCG Trigger: GCCACAGACATACGTGGATCATATGGACGGATCGTA...AGATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR TCA 90 bp | CCATCCAGTCTACTTCATCGAACTCCGAGTCATCTTCCAAGTCACTGTGGCTTTGAGGTTCATGGGGTCTaGCTAAGACCCTCTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSSLLHRTPSHLPSHCGFEVHGV*LRPSPQ Trigger: CTGAGGAGAGGGTCTTAGTCAGACCCCATGAACCTC...AAAGCCACAGTGACTTGGAAGATGACTCGGAGTTCGATGAAGTAGACTGGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR GCA 90 bp | CCTTGCAATACAGAGCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAGCTGTGTGGCACAAGTaGCGAGGGTCGATGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PCNTEQGGCLTPSSLLHRAVWHK*RGSMFL Trigger: AAGAAACATCGACCCTCGGCACTTGTGCCACACAGC...TCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGCTCTGTATTGCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR GCA 90 bp | GGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTTCCAAGTCCGCCTGTCATGAGGTaGTCTTGGCACTTTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GCLTPSSLLHRTPSHLPSPPVMR*SWHFLW Trigger: CCAGAGAAAGTGCCAAGAGCACCTCATGACAGGCGG...ACTTGGAAGATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR GCA 90 bp | TCAAAGAACAAGCGCCACGAGGGACATGTGCATTCAGCCTTGCAATACAGAGCAGCTTCCTGTTCACGCTaGTCTTCCACTTTGCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKNKRHEGHVHSALQYRAASCSR*SSTLRS Trigger: GCTTCGCAAAGTGGAAGAGCAGCGTGAACAGGAAGC...TGCTCTGTATTGCAAGGCTGAATGCACATGTCCCTCGTGGCGCTTGTTCTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR CCA 90 bp | GCCACGAGGGACATGTGCATTCAGCCTTGCAATACAGAGCAAGGCGGCTGTCTTCTCATAATGAGAGGCTaGGCCATTGGCAACTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ATRDMCIQPCNTEQGGCLLIMRG*AIGNFN Trigger: ATTGAAGTTGCCAATGGCCCAGCCTCTCATTATGAG...AAGACAGCCGCCTTGCTCTGTATTGCAAGGCTGAATGCACATGTCCCTCGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR CCA 90 bp | GGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTTCCAAGTTGCTCCATGCATTGGTaGAGGCGGAGGAGGTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: GCLTPSSLLHRTPSHLPSCSMHW*RRRRFM Trigger: CATGAACCTCCTCCGCCTCCACCAATGCATGGAGCA...ACTTGGAAGATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR CCA 90 bp | GGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTTCCAAGTAATTGGAGGAGGAGCTaGGTGAAGAACACCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GCLTPSSLLHRTPSHLPSNWRRS*VKNTRG Trigger: GCCCCTGGTGTTCTTCACCCAGCTCCTCCTCCAATT...ACTTGGAAGATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGACACAGCTGCCTTCAAGATTCCAGTCTCAGTTGCGTTCTTCAAATTTGGCAGGGTGGATGGATaGCGCTTTGGCTCAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPDTAAFKIPVSVAFFKFGRVDG*RFGSEA Trigger: TGCCTCTGAGCCAAAGCGCCATCCATCCACCCTGCC...AAATTTGAAGAACGCAACTGAGACTGGAATCTTGAAGGCAGCTGTGTCTGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR TCA 90 bp | GGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTTCCAAGTTGGCAAGGCAGAGAGTaGGTACGATCCGTCCATATG | + |
|
Preference number: 4 (lower is better) Translates to: GCLTPSSLLHRTPSHLPSWQGRE*VRSVHM Trigger: CATATGGACGGATCGTACTCACTCTCTGCCTTGCCA...ACTTGGAAGATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR GCA 90 bp | TTCCCAGACACAGCTGCCTTCAAGATTCCAGTCTCAGTTGCGTTCTTCAAATTTGCATCTCCTGCTCCATaGATTGGTGGAGGCGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FPDTAAFKIPVSVAFFKFASPAP*IGGGGG Trigger: TCCTCCGCCTCCACCAATGCATGGAGCAGGAGATGC...AAATTTGAAGAACGCAACTGAGACTGGAATCTTGAAGGCAGCTGTGTCTGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR TCA 90 bp | CCTTGCAATACAGAGCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAAGAAGTTCACTCATCTaGCTGAATGGCAAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PCNTEQGGCLTPSSLLHRRSSLI*LNGKAE Trigger: CTCTGCCTTGCCATTCAGTCAGATGAGTGAACTTCT...TCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGCTCTGTATTGCAAGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR TCA 90 bp | CAGACACAGCTGCCTTCAAGATTCCAGTCTCAGTTGCGTTCTTCAAATTTAAAAGGAGGAGGAGCTGGGTaGAGAACACCAGGGGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: QTQLPSRFQSQLRSSNLKGGGAG*RTPGAI Trigger: GATTGCCCCTGGTGTTCTTCACCCAGCTCCTCCTCC...TTTTAAATTTGAAGAACGCAACTGAGACTGGAATCTTGAAGGCAGCTGTGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR TCA 90 bp | CAGACACAGCTGCCTTCAAGATTCCAGTCTCAGTTGCGTTCTTCAAATTTAAAAAGCCCAGAGGGAGGATaGGCAAGAGCTGCAACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: QTQLPSRFQSQLRSSNLKSPEGG*ARAATA Trigger: CGCAGTTGCAGCTCTTGCTCATCCTCCCTCTGGGCT...TTTTAAATTTGAAGAACGCAACTGAGACTGGAATCTTGAAGGCAGCTGTGTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR GCA 90 bp | CAGACACAGCTGCCTTCAAGATTCCAGTCTCAGTTGCGTTCTTCAAATTTAAAAAATGCCCCTGGGCAGTaGTGTGTGGCACAAGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QTQLPSRFQSQLRSSNLKNAPGQ*CVAQVP Trigger: CGGCACTTGTGCCACACAGCACTGCCCAGGGGCATT...TTTTAAATTTGAAGAACGCAACTGAGACTGGAATCTTGAAGGCAGCTGTGTCTG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR GCA 90 bp | TTCCCAGACACAGCTGCCTTCAAGATTCCAGTCTCAGTTGCGTTCTTCAAATTTGGGCTTTGCATCTCCTaGTCCATGCATTGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPDTAAFKIPVSVAFFKFGLCIS*SMHWWR Trigger: CCTCCACCAATGCATGGAGCAGGAGATGCAAAGCCC...AAATTTGAAGAACGCAACTGAGACTGGAATCTTGAAGGCAGCTGTGTCTGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR GCA 90 bp | AACTTCTATAGGCAAGCAAAACTGTACCACACAATATATAAGTGGGAAGGGGTTGGTGGAGGCAGCCCCTaGACTTCACCTTGCGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NFYRQAKLYHTIYKWEGVGGGSP*TSPCGS Trigger: ACTCCCGCAAGGTGAAGTGCAGGGGCTGCCTCCACC...AACCCCTTCCCACTTATATATTGTGTGGTACAGTTTTGCTTGCCTATAGAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR CCA 90 bp | CCTTGCAATACAGAGCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAGCTGATCTTGAATTGTaGAGCTCCGGAAAGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PCNTEQGGCLTPSSLLHRADLEL*SSGKPF Trigger: GAAAGGCTTTCCGGAGCTCCACAATTCAAGATCAGC...TCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGCTCTGTATTGCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR CCA 90 bp | CAGACACAGCTGCCTTCAAGATTCCAGTCTCAGTTGCGTTCTTCAAATTTAAAAACCCGGGGCAGTAGATaGTGCTGGATGGAGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QTQLPSRFQSQLRSSNLKTRGSR*CWMEPR Trigger: TCTGGGCTCCATCCAGCACCATCTACTGCCCCGGGT...TTTTAAATTTGAAGAACGCAACTGAGACTGGAATCTTGAAGGCAGCTGTGTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR GCA 90 bp | TTCCCAGACACAGCTGCCTTCAAGATTCCAGTCTCAGTTGCGTTCTTCAAATTTGCTTCCTGTTCACGCTaGTCTTCCACTTTGCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FPDTAAFKIPVSVAFFKFASCSR*SSTLRS Trigger: GCTTCGCAAAGTGGAAGAGCAGCGTGAACAGGAAGC...AAATTTGAAGAACGCAACTGAGACTGGAATCTTGAAGGCAGCTGTGTCTGGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR CCA 90 bp | AGCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTTGCCAGGGAAATGTTaGTTACACATTCCAGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SKAAVLLHPVYFIELRVILPGKC*LHIPVR Trigger: ACGAACTGGAATGTGTAACCAACATTTCCCTGGCAA...GATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAGAACAAGCGCCACGAGGGACATGTGCATTCAGCCTTGCAATACAGAGCACTCATAATGAGAGGCTaGGCCATTGGCAACTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SKNKRHEGHVHSALQYRALIMRG*AIGNFN Trigger: ATTGAAGTTGCCAATGGCCCAGCCTCTCATTATGAG...TGCTCTGTATTGCAAGGCTGAATGCACATGTCCCTCGTGGCGCTTGTTCTTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR TCA 90 bp | AAGCTAACCATTCCTTTAAGAGAATTCAACACTACAAGCTACATGTTCCTTCTGAGCCCAGAGGGAGGATaGGCAAGAGCTGCAACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: KLTIPLREFNTTSYMFLLSPEGG*ARAATA Trigger: CGCAGTTGCAGCTCTTGCTCATCCTCCCTCTGGGCT...CAGAAGGAACATGTAGCTTGTAGTGTTGAATTCTCTTAAAGGAATGGTTAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR GCA 90 bp | AGCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCACATCGTATGTTTCTTaGAATGGAATAGGCAACGTC | + |
|
Preference number: 4 (lower is better) Translates to: SKAAVLLHPVYFIELRVITSYVS*NGIGNV Trigger: GACGTTGCCTATTCCATTGCAAGAAACATACGATGT...GATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR GCA 90 bp | CAGACACAGCTGCCTTCAAGATTCCAGTCTCAGTTGCGTTCTTCAAATTTAAAAACTGGGGGAGAGGGCTaGACTAGAGGAGGAGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: QTQLPSRFQSQLRSSNLKTGGEG*TRGGAI Trigger: AATTGCTCCTCCTCTAGTGCAGCCCTCTCCCCCAGT...TTTTAAATTTGAAGAACGCAACTGAGACTGGAATCTTGAAGGCAGCTGTGTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTAACCATTCCTTTAAGAGAATTCAACACTACAAGCTACATGTTCCTTCTGGAGGAGGTGGGGGAGTaGGGCTCACAAACACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KLTIPLREFNTTSYMFLLEEVGE*GSQTQV Trigger: CACCTGTGTTTGTGAGCCCCACTCCCCCACCTCCTC...CAGAAGGAACATGTAGCTTGTAGTGTTGAATTCTCTTAAAGGAATGGTTAGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGACACAGCTGCCTTCAAGATTCCAGTCTCAGTTGCGTTCTTCAAATTTGAATACCTTTTCGGATaGCTTCCAGCAGCACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPDTAAFKIPVSVAFFKFEYLFG*LPAAHS Trigger: GGAGTGTGCTGCTGGAAGCCATCCGAAAAGGTATTC...AAATTTGAAGAACGCAACTGAGACTGGAATCTTGAAGGCAGCTGTGTCTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR CCA 90 bp | CCATCCAGTCTACTTCATCGAACTCCGAGTCATCTTCCAAGTCACTGTGGCTTTTTGCCAGGGAAATGTTaGTTACACATTCCAGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PSSLLHRTPSHLPSHCGFLPGKC*LHIPVR Trigger: ACGAACTGGAATGTGTAACCAACATTTCCCTGGCAA...AAAGCCACAGTGACTTGGAAGATGACTCGGAGTTCGATGAAGTAGACTGGATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR GCA 90 bp | AACTTCTATAGGCAAGCAAAACTGTACCACACAATATATAAGTGGGAAGGGGTTTATACTCCACAGCAATaGGGCGAGACAGGATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NFYRQAKLYHTIYKWEGVYTPQQ*GETGWW Trigger: CCACCATCCTGTCTCGCCGCATTGCTGTGGAGTATA...AACCCCTTCCCACTTATATATTGTGTGGTACAGTTTTGCTTGCCTATAGAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTAACCATTCCTTTAAGAGAATTCAACACTACAAGCTACATGTTCCTTCTGAATTGGAGGAGGAGCTaGGTGAAGAACACCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLTIPLREFNTTSYMFLLNWRRS*VKNTRG Trigger: GCCCCTGGTGTTCTTCACCCAGCTCCTCCTCCAATT...CAGAAGGAACATGTAGCTTGTAGTGTTGAATTCTCTTAAAGGAATGGTTAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTAACCATTCCTTTAAGAGAATTCAACACTACAAGCTACATGTTCCTTCTGTACAGGCAGGGTGGATaGATGGCGCTTTGGCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KLTIPLREFNTTSYMFLLYRQGG*MALWLR Trigger: TCTGAGCCAAAGCGCCATCCATCCACCCTGCCTGTA...CAGAAGGAACATGTAGCTTGTAGTGTTGAATTCTCTTAAAGGAATGGTTAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR GCA 90 bp | AAGCTAACCATTCCTTTAAGAGAATTCAACACTACAAGCTACATGTTCCTTCTGTATACTCCACAGCAATaGGGCGAGACAGGATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLTIPLREFNTTSYMFLLYTPQQ*GETGWW Trigger: CCACCATCCTGTCTCGCCGCATTGCTGTGGAGTATA...CAGAAGGAACATGTAGCTTGTAGTGTTGAATTCTCTTAAAGGAATGGTTAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR CCA 90 bp | CAGACACAGCTGCCTTCAAGATTCCAGTCTCAGTTGCGTTCTTCAAATTTAAAAGCTGATCTTGAATTGTaGAGCTCCGGAAAGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QTQLPSRFQSQLRSSNLKADLEL*SSGKPF Trigger: GAAAGGCTTTCCGGAGCTCCACAATTCAAGATCAGC...TTTTAAATTTGAAGAACGCAACTGAGACTGGAATCTTGAAGGCAGCTGTGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR TCA 90 bp | CAGACACAGCTGCCTTCAAGATTCCAGTCTCAGTTGCGTTCTTCAAATTTAAAAACTTTCTCTGGTTCATaGGGACGGTCTAGATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QTQLPSRFQSQLRSSNLKTFSGS*GRSRFF Trigger: GAAAAATCTAGACCGTCCTCATGAACCAGAGAAAGT...TTTTAAATTTGAAGAACGCAACTGAGACTGGAATCTTGAAGGCAGCTGTGTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR TCA 90 bp | AACTTCTATAGGCAAGCAAAACTGTACCACACAATATATAAGTGGGAAGGGGTTACTTTCTCTGGTTCATaGGGACGGTCTAGATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NFYRQAKLYHTIYKWEGVTFSGS*GRSRFF Trigger: GAAAAATCTAGACCGTCCTCATGAACCAGAGAAAGT...AACCCCTTCCCACTTATATATTGTGTGGTACAGTTTTGCTTGCCTATAGAAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR GCA 90 bp | AACTTCTATAGGCAAGCAAAACTGTACCACACAATATATAAGTGGGAAGGGGTTACATCGTATGTTTCTTaGAATGGAATAGGCAACGTC | + |
|
Preference number: 4 (lower is better) Translates to: NFYRQAKLYHTIYKWEGVTSYVS*NGIGNV Trigger: GACGTTGCCTATTCCATTGCAAGAAACATACGATGT...AACCCCTTCCCACTTATATATTGTGTGGTACAGTTTTGCTTGCCTATAGAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR GCA 90 bp | AAGCTAACCATTCCTTTAAGAGAATTCAACACTACAAGCTACATGTTCCTTCTGCTCATCGTTATATCTTaGAAAGACAGTTCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLTIPLREFNTTSYMFLLLIVIS*KDSSSS Trigger: GGAGGAAGAACTGTCTTTGCAAGATATAACGATGAG...CAGAAGGAACATGTAGCTTGTAGTGTTGAATTCTCTTAAAGGAATGGTTAGCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR CAA 90 bp | GCCACGAGGGACATGTGCATTCAGCCTTGCAATACAGAGCAAGGCGGCTGTCTTCTCCTGCTCCATGCATaGGTGGAGGCGGAGGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ATRDMCIQPCNTEQGGCLLLLHA*VEAEEV Trigger: AACCTCCTCCGCCTCCACCAATGCATGGAGCAGGAG...AAGACAGCCGCCTTGCTCTGTATTGCAAGGCTGAATGCACATGTCCCTCGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS TCA 90 bp | CTCCTGCTCCATGCATTGGTGGAGGCGGAGGAGGTTCATGGGGTCTaGCTAAGACCCTCTCCTCAGCTCTGGTCAGAAGTTCACTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLHALVEAEEVHGV*LRPSPQLWSEVHSS Trigger: AGATGAGTGAACTTCTGACCAGAGCTGAGGAGAGGGTCTTAGTCAGACCCCATGAACCTCCTCCGCCTCCACCAATGCATGGAGCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS GCA 90 bp | GCGAAGCTGAATACCTTTTCGGATGGCTTCCAGCAGCACACTCCTTaGGTCACTGATTACAGGCAGGGTGGATGGATGGCGCTTTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AKLNTFSDGFQQHTP*VTDYRQGGWMALWL Trigger: GAGCCAAAGCGCCATCCATCCACCCTGCCTGTAATCAGTGACGCAAGGAGTGTGCTGCTGGAAGCCATCCGAAAAGGTATTCAGCTTCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTCTCCTGCTCCATGCATaGGTGGAGGCGGAGGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ARRLSYSIQSTSSNSESSLLLHA*VEAEEV Trigger: AACCTCCTCCGCCTCCACCAATGCATGGAGCAGGAG...AGATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS CCA 90 bp | TTTGCATCTCCTGCTCCATGCATTGGTGGAGGCGGAGGAGGTTCATaGGGTCTGACTAAGACCCTCTCCTCAGCTCTGGTCAGAAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FASPAPCIGGGGGGS*GLTKTLSSALVRSS Trigger: TGAACTTCTGACCAGAGCTGAGGAGAGGGTCTTAGTCAGACCCCATGAACCTCCTCCGCCTCCACCAATGCATGGAGCAGGAGATGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
||
| CDS CCA 90 bp | AGCAGCACACTCCTTGCGTCACTGATTACAGGCAGGGTGGATGGATaGCGCTTTGGCTCAGAGGCAGGTAGAACTTGTGATGGAGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SSTLLASLITGRVDG*RFGSEAGRTCDGGD Trigger: ATCTCCTCCATCACAAGTTCTACCTGCCTCTGAGCCAAAGCGCCATCCATCCACCCTGCCTGTAATCAGTGACGCAAGGAGTGTGCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CAA 90 bp | AGGGACATGTGCATTCAGCCTTGCAATACAGAGCAAGGCGGCTGTCTTACTCCACTGGTGGGGGAGGAGTaGAGGTCATTGAAGCTCTTA | + |
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Preference number: 5 (lower is better) Translates to: RDMCIQPCNTEQGGCLTPLVGEE*RSLKLL Trigger: TAAGAGCTTCAATGACCTCAACTCCTCCCCCACCAG...TGGAGTAAGACAGCCGCCTTGCTCTGTATTGCAAGGCTGAATGCACATGTCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CAA 90 bp | AGCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCCAATCCGCTCGTGTTTaGCTTCCTGTTCACGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: SKAAVLLHPVYFIELRVIQSARV*LPVHAA Trigger: AGCAGCGTGAACAGGAAGCAAAACACGAGCGGATTG...GATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CAA 90 bp | AGGGACATGTGCATTCAGCCTTGCAATACAGAGCAAGGCGGCTGTCTTACTCCACAATCCGCTCGTGTTTaGCTTCCTGTTCACGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: RDMCIQPCNTEQGGCLTPQSARV*LPVHAA Trigger: AGCAGCGTGAACAGGAAGCAAAACACGAGCGGATTG...TGGAGTAAGACAGCCGCCTTGCTCTGTATTGCAAGGCTGAATGCACATGTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS CCA 90 bp | CCACGTATGTCTGTGGCCTTGTCTCATAATGAGAGGCTGGGCCATTaGCAACTTCAATATGCTTGTGTAGGAGGTCAGCGTCATCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: PRMSVALSHNERLGH*QLQYACVGGQRHPQ Trigger: CTGAGGATGACGCTGACCTCCTACACAAGCATATTGAAGTTGCCAATGGCCCAGCCTCTCATTATGAGACAAGGCCACAGACATACGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CAA 90 bp | GCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTGAAAAGCTGCTGATCTaGAATTGTGGAGCTCCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ARRLSYSIQSTSSNSESSEKLLI*NCGAPE Trigger: TTCCGGAGCTCCACAATTCAAGATCAGCAGCTTTTC...AGATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CAA 90 bp | AGCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTGTCATGAGGTGCTCTaGGCACTTTCTCTGGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: SKAAVLLHPVYFIELRVICHEVL*ALSLVH Trigger: ATGAACCAGAGAAAGTGCCAAGAGCACCTCATGACA...GATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CAA 90 bp | GCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTGCAACTTCAATATGCTaGTGTAGGAGGTCAGCGTCA | + |
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Preference number: 5 (lower is better) Translates to: ARRLSYSIQSTSSNSESSATSIC*CRRSAS Trigger: TGACGCTGACCTCCTACACAAGCATATTGAAGTTGC...AGATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CAA 90 bp | GGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTTCCAAGTCTGGTGGGGGAGGAGTaGAGGTCATTGAAGCTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: GCLTPSSLLHRTPSHLPSLVGEE*RSLKLL Trigger: TAAGAGCTTCAATGACCTCAACTCCTCCCCCACCAG...ACTTGGAAGATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CAA 90 bp | AGGGACATGTGCATTCAGCCTTGCAATACAGAGCAAGGCGGCTGTCTTACTCCATTTGCCAGGGAAATGTaGGTTACACATTCCAGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RDMCIQPCNTEQGGCLTPFAREM*VTHSSS Trigger: CGAACTGGAATGTGTAACCAACATTTCCCTGGCAAA...TGGAGTAAGACAGCCGCCTTGCTCTGTATTGCAAGGCTGAATGCACATGTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS CCA 90 bp | ATTGAGAGGCGGAGGTTGCTCACACACATCGTATGTTTCTTGCAATaGAATAGGCAACGTCTTGCGGTCGAAAAGCTGCTGATCTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: IERRRLLTHIVCFLQ*NRQRLAVEKLLILN Trigger: ATTCAAGATCAGCAGCTTTTCGACCGCAAGACGTTGCCTATTCCATTGCAAGAAACATACGATGTGTGTGAGCAACCTCCGCCTCTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CAA 90 bp | GGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTTCCAAGTTTTGCCAGGGAAATGTaGGTTACACATTCCAGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: GCLTPSSLLHRTPSHLPSFAREM*VTHSSS Trigger: CGAACTGGAATGTGTAACCAACATTTCCCTGGCAAA...ACTTGGAAGATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CAA 90 bp | GCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTTCTCATCGTTATATCTaGCAAAGACAGTTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ARRLSYSIQSTSSNSESSSHRYI*QRQFFL Trigger: GAGGAAGAACTGTCTTTGCAAGATATAACGATGAGA...AGATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CAA 90 bp | CCTTGCAATACAGAGCAAGGCGGCTGTCTTACTCCATCCAGTCTACTTCATCGACACATCGTATGTTTCTaGCAATGGAATAGGCAACGT | + |
|
Preference number: 5 (lower is better) Translates to: PCNTEQGGCLTPSSLLHRHIVCF*QWNRQR Trigger: ACGTTGCCTATTCCATTGCAAGAAACATACGATGTG...TCGATGAAGTAGACTGGATGGAGTAAGACAGCCGCCTTGCTCTGTATTGCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS GCA 90 bp | GGATCAAGCTGTGTGACACTAACAGACAATCGGTCCACGCGCTCTTaGAACGAGTTAACTCTGAAGGAAAAACTGTGTGCTTCATTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GSSCVTLTDNRSTRS*NELTLKEKLCASLN Trigger: ATTCAATGAAGCACACAGTTTTTCCTTCAGAGTTAACTCGTTGCAAGAGCGCGTGGACCGATTGTCTGTTAGTGTCACACAGCTTGATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CAA 90 bp | TTCCCAGACACAGCTGCCTTCAAGATTCCAGTCTCAGTTGCGTTCTTCAAATTTTGTCATGAGGTGCTCTaGGCACTTTCTCTGGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FPDTAAFKIPVSVAFFKFCHEVL*ALSLVH Trigger: ATGAACCAGAGAAAGTGCCAAGAGCACCTCATGACA...AAATTTGAAGAACGCAACTGAGACTGGAATCTTGAAGGCAGCTGTGTCTGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CAA 90 bp | CCATCCAGTCTACTTCATCGAACTCCGAGTCATCTTCCAAGTCACTGTGGCTTTTCTCATCGTTATATCTaGCAAAGACAGTTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PSSLLHRTPSHLPSHCGFSHRYI*QRQFFL Trigger: GAGGAAGAACTGTCTTTGCAAGATATAACGATGAGA...AAAGCCACAGTGACTTGGAAGATGACTCGGAGTTCGATGAAGTAGACTGGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CAA 90 bp | GGCTGTCTTACTCCATCCAGTCTACTTCATCGAACTCCGAGTCATCTTCCAAGTCTTGTCCTCTGTATCTaGCAACATCTTTTCTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GCLTPSSLLHRTPSHLPSLVLCI*QHLFFP Trigger: TGGAAAGAAAAGATGTTGCAAGATACAGAGGACAAG...ACTTGGAAGATGACTCGGAGTTCGATGAAGTAGACTGGATGGAGTAAGACAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS-3UTR CAA 90 bp | TTCCCAGACACAGCTGCCTTCAAGATTCCAGTCTCAGTTGCGTTCTTCAAATTTCACATCGTATGTTTCTaGCAATGGAATAGGCAACGT | + |
|
Preference number: 5 (lower is better) Translates to: FPDTAAFKIPVSVAFFKFHIVCF*QWNRQR Trigger: ACGTTGCCTATTCCATTGCAAGAAACATACGATGTG...AAATTTGAAGAACGCAACTGAGACTGGAATCTTGAAGGCAGCTGTGTCTGGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS CCA 72 bp | GGGTGGAGGCAGCCCCTGCACTTCACCTTGCGGGAGTaGGTGAACTGGCACAGTCTCGCATACTGGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GWRQPLHFTLRE*VNWHSLAYWGS Trigger: GCTGCCCCAGTATGCGAGACTGTGCCAGTTCACCCACTCCCGCAAGGTGAAGTGCAGGGGCTGCCTCCACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS TCA 72 bp | GGAGGCAGCCCCTGCACTTCACCTTGCGGGAGTGGGTaGACTGGCACAGTCTCGCATACTGGGGCAGCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: GGSPCTSPCGSG*TGTVSHTGAAR Trigger: TCGAGCTGCCCCAGTATGCGAGACTGTGCCAGTTCACCCACTCCCGCAAGGTGAAGTGCAGGGGCTGCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS CCA 72 bp | TTGCGGGAGTGGGTGAACTGGCACAGTCTCGCATACTaGGGCAGCTCGAGCTACTGGGGGAGAGGGCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LREWVNWHSLAY*GSSSYWGRGLH Trigger: GTGCAGCCCTCTCCCCCAGTAGCTCGAGCTGCCCCAGTATGCGAGACTGTGCCAGTTCACCCACTCCCGCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS CCA 72 bp | CAGCCCCTGCACTTCACCTTGCGGGAGTGGGTGAACTaGCACAGTCTCGCATACTGGGGCAGCTCGAGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: QPLHFTLREWVN*HSLAYWGSSSY Trigger: GTAGCTCGAGCTGCCCCAGTATGCGAGACTGTGCCAGTTCACCCACTCCCGCAAGGTGAAGTGCAGGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS GCA 72 bp | GGCCAGCTTCTGCCATTCCCGCCGCCTGTCATGAGGTaGTCTTGGCACTTTCTCTGGTTCATGAGGACGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GQLLPFPPPVMR*SWHFLWFMRTV Trigger: GACCGTCCTCATGAACCAGAGAAAGTGCCAAGAGCACCTCATGACAGGCGGCGGGAATGGCAGAAGCTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS CCA 72 bp | CCTGCTCCATGCATTGGTGGAGGCGGAGGAGGTTCATaGGGTCTGACTAAGACCCTCTCCTCAGCTCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PAPCIGGGGGGS*GLTKTLSSALV Trigger: GACCAGAGCTGAGGAGAGGGTCTTAGTCAGACCCCATGAACCTCCTCCGCCTCCACCAATGCATGGAGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS CCA 72 bp | ACTTGTGATGGAGGAGATGGAGGCATTAATGGAGCATaGGGACCCGGGGCAGTAGATGGTGCTGGATGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: TCDGGDGGINGA*GPGAVDGAGWS Trigger: GCTCCATCCAGCACCATCTACTGCCCCGGGTCCCCATGCTCCATTAATGCCTCCATCTCCTCCATCACAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS CAA 72 bp | GCTTCTGCCATTCCCGCCGCCTGTCATGAGGTGCTCTaGGCACTTTCTCTGGTTCATGAGGACGGTCTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: ASAIPAACHEVL*ALSLVHEDGLD Trigger: ATCTAGACCGTCCTCATGAACCAGAGAAAGTGCCAAGAGCACCTCATGACAGGCGGCGGGAATGGCAGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS GCA 72 bp | AATACCTTTTCGGATGGCTTCCAGCAGCACACTCCTTaGGTCACTGATTACAGGCAGGGTGGATGGATGGCG | + |
|
Preference number: 6 (lower is better) Translates to: NTFSDGFQQHTP*VTDYRQGGWMA Trigger: CGCCATCCATCCACCCTGCCTGTAATCAGTGACGCAAGGAGTGTGCTGCTGGAAGCCATCCGAAAAGGTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS CCA 72 bp | CTCCTTGCGTCACTGATTACAGGCAGGGTGGATGGATaGCGCTTTGGCTCAGAGGCAGGTAGAACTTGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: LLASLITGRVDG*RFGSEAGRTCD Trigger: ATCACAAGTTCTACCTGCCTCTGAGCCAAAGCGCCATCCATCCACCCTGCCTGTAATCAGTGACGCAAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS TCA 72 bp | GCTTCCTGTTCACGCTGCTCTTCCACTTTGCGAAGCTaGATACCTTTTCGGATGGCTTCCAGCAGCACACTC | + |
|
Preference number: 6 (lower is better) Translates to: ASCSRCSSTLRS*IPFRMASSSTL Trigger: GAGTGTGCTGCTGGAAGCCATCCGAAAAGGTATTCAGCTTCGCAAAGTGGAAGAGCAGCGTGAACAGGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS GCA 72 bp | GATGGTGGCCACGTCGTTTTCAATCCGCTCGTGTTTTaGTTCCTGTTCACGCTGCTCTTCCACTTTGCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: DGGHVVFNPLVF*FLFTLLFHFAK Trigger: CTTCGCAAAGTGGAAGAGCAGCGTGAACAGGAAGCAAAACACGAGCGGATTGAAAACGACGTGGCCACCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS GCA 72 bp | AGAGGCGGAGGTTGCTCACACACATCGTATGTTTCTTaGAATGGAATAGGCAACGTCTTGCGGTCGAAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: RGGGCSHTSYVS*NGIGNVLRSKS Trigger: GCTTTTCGACCGCAAGACGTTGCCTATTCCATTGCAAGAAACATACGATGTGTGTGAGCAACCTCCGCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS CAA 72 bp | GAGAGGCGGAGGTTGCTCACACACATCGTATGTTTCTaGCAATGGAATAGGCAACGTCTTGCGGTCGAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: ERRRLLTHIVCF*QWNRQRLAVEK Trigger: CTTTTCGACCGCAAGACGTTGCCTATTCCATTGCAAGAAACATACGATGTGTGTGAGCAACCTCCGCCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS CAA 90 bp | GAGGATATTGAGAGGCGGAGGTTGCTCACACACATCGTATGTTTCTaGCAATGGAATAGGCAACGTCTTGCGGTCGAAAAGCTGCTGATC | + |
|
Preference number: 6 (lower is better) Translates to: EDIERRRLLTHIVCF*QWNRQRLAVEKLLI Trigger: GATCAGCAGCTTTTCGACCGCAAGACGTTGCCTATTCCATTGCAAGAAACATACGATGTGTGTGAGCAACCTCCGCCTCTCAATATCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS CAA 72 bp | CTGTGTGACACTAACAGACAATCGGTCCACGCGCTCTaGCAACGAGTTAACTCTGAAGGAAAAACTGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LCDTNRQSVHAL*QRVNSEGKTVC Trigger: GCACACAGTTTTTCCTTCAGAGTTAACTCGTTGCAAGAGCGCGTGGACCGATTGTCTGTTAGTGTCACACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS CAA 72 bp | AATAGGCAACGTCTTGCGGTCGAAAAGCTGCTGATCTaGAATTGTGGAGCTCCGGAAAGCCTTTCTCATCGT | + |
|
Preference number: 6 (lower is better) Translates to: NRQRLAVEKLLI*NCGAPESLSHR Trigger: ACGATGAGAAAGGCTTTCCGGAGCTCCACAATTCAAGATCAGCAGCTTTTCGACCGCAAGACGTTGCCTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS GCA 72 bp | TGTGTGACACTAACAGACAATCGGTCCACGCGCTCTTaGAACGAGTTAACTCTGAAGGAAAAACTGTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: CVTLTDNRSTRS*NELTLKEKLCA Trigger: AGCACACAGTTTTTCCTTCAGAGTTAACTCGTTGCAAGAGCGCGTGGACCGATTGTCTGTTAGTGTCACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS CAA 72 bp | GCAACGTCTTGCGGTCGAAAAGCTGCTGATCTTGAATaGTGGAGCTCCGGAAAGCCTTTCTCATCGTTATAT | + |
|
Preference number: 6 (lower is better) Translates to: ATSCGRKAADLE*WSSGKPFSSLY Trigger: ATATAACGATGAGAAAGGCTTTCCGGAGCTCCACAATTCAAGATCAGCAGCTTTTCGACCGCAAGACGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS CAA 90 bp | AGGATCAAGCTGTGTGACACTAACAGACAATCGGTCCACGCGCTCTaGCAACGAGTTAACTCTGAAGGAAAAACTGTGTGCTTCATTGAA | + |
|
Preference number: 6 (lower is better) Translates to: RIKLCDTNRQSVHAL*QRVNSEGKTVCFIE Trigger: TTCAATGAAGCACACAGTTTTTCCTTCAGAGTTAACTCGTTGCAAGAGCGCGTGGACCGATTGTCTGTTAGTGTCACACAGCTTGATCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS CAA 90 bp | TTGCAATGGAATAGGCAACGTCTTGCGGTCGAAAAGCTGCTGATCTaGAATTGTGGAGCTCCGGAAAGCCTTTCTCATCGTTATATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LQWNRQRLAVEKLLI*NCGAPESLSHRYIL Trigger: CAAGATATAACGATGAGAAAGGCTTTCCGGAGCTCCACAATTCAAGATCAGCAGCTTTTCGACCGCAAGACGTTGCCTATTCCATTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS CCA 72 bp | ACGTCTTGCGGTCGAAAAGCTGCTGATCTTGAATTGTaGAGCTCCGGAAAGCCTTTCTCATCGTTATATCTT | + |
|
Preference number: 6 (lower is better) Translates to: TSCGRKAADLEL*SSGKPFSSLYL Trigger: AAGATATAACGATGAGAAAGGCTTTCCGGAGCTCCACAATTCAAGATCAGCAGCTTTTCGACCGCAAGACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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| CDS CAA 72 bp | TGTGGAGCTCCGGAAAGCCTTTCTCATCGTTATATCTaGCAAAGACAGTTCTTCCTCCTTAGGATCAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CGAPESLSHRYI*QRQFFLLRIKL Trigger: CAGCTTGATCCTAAGGAGGAAGAACTGTCTTTGCAAGATATAACGATGAGAAAGGCTTTCCGGAGCTCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019975.14 ENSMUST00000105509.2 |
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