Pregenerated sensors for WAS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031165Ensembl transcript IDs: ENSMUST00000033505.7
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACGGAGCAGAATCTAGATaGCAGAGTGAGTGTGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: HKARSKPKGTVRERNPNYGAESR*QSECGE Trigger: CTCTCCACACTCACTCTGCCATCTAGATTCTGCTCC...GTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| 3UTR-3UTR CAA 90 bp | GTAGACCAGGCTGGTCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCTTCTGTCCCCAACAGGTGAATaGGGAAGCTGCCAGCGGAGC | + |
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Preference number: 3 (lower is better) Translates to: VDQAGLELRNPPASASLLSPTGE*GSCQRS Trigger: GCTCCGCTGGCAGCTTCCCAATTCACCTGTTGGGGA...CAGAAGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGACCAGCCTGGTCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| 3UTR GCA 72 bp | CCAGGCTGGTCTCGAACTCAGAAATCCACCTGCCTCTaGCTCCCTTCTGCTGGAATTAAAGGCGTGCGCCAC | + |
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Preference number: 3 (lower is better) Translates to: PGWSRTQKSTCL*LPSAGIKGVRH Trigger: GTGGCGCACGCCTTTAATTCCAGCAGAAGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGACCAGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| 3UTR CCA 72 bp | GTGAATTGGGAAGCTGCCAGCGGAGCAGAATCTAGATaGCAGAGTGAGTGTGGAGAGGAACTGGCTTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: VNWEAASGAESR*QSECGEELACW Trigger: CCAGCAAGCCAGTTCCTCTCCACACTCACTCTGCCATCTAGATTCTGCTCCGCTGGCAGCTTCCCAATTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR GCA 90 bp | GTAGACCAGGCTGGTCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCTTCTGCTCGGCCCCCAGGCCTaGCTCCTACAGGGCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: VDQAGLELRNPPASASLLLGPQA*LLQGQG Trigger: GCCCTGGCCCTGTAGGAGGCAGGCCTGGGGGCCGAG...CAGAAGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGACCAGCCTGGTCTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | GTAGACCAGGCTGGTCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCTTCTGAGTGGCTGGAGGGGGTaGTGGAGGAGGACCCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VDQAGLELRNPPASASLLSGWRG*WRRTPS Trigger: CGAGGGGGTCCTCCTCCACCACCCCCTCCAGCCACT...CAGAAGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGACCAGCCTGGTCTAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | CAGGTGAATTGGGAAGCTGCCAGCGGAGCAGAATCTAGATGGCAGAGTGAGTGTATCTCCACCCGGGTGTaGGGGCACAGGTGGGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: QVNWEAASGAESRWQSECISTRV*GHRWEP Trigger: GGGCTCCCACCTGTGCCCCCACACCCGGGTGGAGAT...ACACTCACTCTGCCATCTAGATTCTGCTCCGCTGGCAGCTTCCCAATTCACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR GCA 90 bp | GTAGACCAGGCTGGTCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCTTCTGGAGCTTGGAGGTCTCTaGGTCAGTGAGCTGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VDQAGLELRNPPASASLLELGGL*VSELGL Trigger: GAGGCCCAGCTCACTGACGCAGAGACCTCCAAGCTC...CAGAAGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGACCAGCCTGGTCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | CAGGTGAATTGGGAAGCTGCCAGCGGAGCAGAATCTAGATGGCAGAGTGAGTGTACTCCCAGGGCAGGGTaGAGGTGGTGGTGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QVNWEAASGAESRWQSECTPRAG*RWWWWW Trigger: CCACCACCACCACCACCTCCACCCTGCCCTGGGAGT...ACACTCACTCTGCCATCTAGATTCTGCTCCGCTGGCAGCTTCCCAATTCACCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR TCA 90 bp | GTAGACCAGGCTGGTCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCTTCTGTCATCCTCGCCGGTCTaGTCCTCCCCTTCATCTGAG | + |
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Preference number: 4 (lower is better) Translates to: VDQAGLELRNPPASASLLSSSPV*SSPSSE Trigger: CTCAGATGAAGGGGAGGATCAGACCGGCGAGGATGA...CAGAAGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGACCAGCCTGGTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR TCA 90 bp | GTAGACCAGGCTGGTCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCTTCTGGGGGTCTTGTTCAGCTaGATTCCCTGCCGGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VDQAGLELRNPPASASLLGVLFS*IPCRIW Trigger: CCAAATCCGGCAGGGAATTCAGCTGAACAAGACCCC...CAGAAGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGACCAGCCTGGTCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR GCA 90 bp | CAGGTGAATTGGGAAGCTGCCAGCGGAGCAGAATCTAGATGGCAGAGTGAGTGTGGCCTCGCTGATTCCTaGCCTGGAGAACAAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QVNWEAASGAESRWQSECGLADS*PGEQAP Trigger: CGGAGCTTGTTCTCCAGGGCAGGAATCAGCGAGGCC...ACACTCACTCTGCCATCTAGATTCTGCTCCGCTGGCAGCTTCCCAATTCACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR GCA 90 bp | CAGGTGAATTGGGAAGCTGCCAGCGGAGCAGAATCTAGATGGCAGAGTGAGTGTTGTTCCATGGTCCAGTaGTCAGCTCCAGGGGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: QVNWEAASGAESRWQSECCSMVQ*SAPGGS Trigger: ACTGCCCCCTGGAGCTGAGCACTGGACCATGGAACA...ACACTCACTCTGCCATCTAGATTCTGCTCCGCTGGCAGCTTCCCAATTCACCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | ACACACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACCCCTCGGCCTGGTGGTaGGGGCCCTCGTGGTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: THKARSKPKGTVRERNPNPSAWW*GPSWCW Trigger: CCAACACCACGAGGGCCCCCACCACCAGGCCGAGGG...GTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | AGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACTCATTTAGGGGCTGGAGGGGGTGGTaGAGGAGGACCCCCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSKPKGTVRERNPNYSFRGWRGW*RRTPSA Trigger: GGCCGAGGGGGTCCTCCTCCACCACCCCCTCCAGCC...CCTAAATGAGTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR TCA 90 bp | GTAGACCAGGCTGGTCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCTTCTGGTGATGTCAGGGTTCTaGATGTCGACCGTCACAAGT | + |
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Preference number: 4 (lower is better) Translates to: VDQAGLELRNPPASASLLVMSGF*MSTVTS Trigger: ACTTGTGACGGTCGACATTCAGAACCCTGACATCAC...CAGAAGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGACCAGCCTGGTCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | CACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACGTTCTGCTGAACGGCTaGTCCCCCTCGGCCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HKARSKPKGTVRERNPNYVLLNG*SPSAPR Trigger: CCTGGGGGCCGAGGGGGACCAGCCGTTCAGCAGAAC...GTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | GTAGACCAGGCTGGTCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCTTCTGGGTCCTGGAGGAGGTTaGAAGGAATGTTCTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VDQAGLELRNPPASASLLGPGGG*KECSAE Trigger: TTCAGCAGAACATTCCTTCCAACCTCCTCCAGGACC...CAGAAGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGACCAGCCTGGTCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | ACACACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACGCATGGCGGCGGAGGTaGTGGGAGTGGCTCTTGGCG | + |
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Preference number: 4 (lower is better) Translates to: THKARSKPKGTVRERNPNAWRRR*WEWLLA Trigger: CGCCAAGAGCCACTCCCACCACCTCCGCCGCCATGC...GTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | AGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACTCATTTAGGACCCCCTCGGCCTGGTaGTGGGGGCCCTCGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSKPKGTVRERNPNYSFRTPSAW*WGPSWC Trigger: ACACCACGAGGGCCCCCACCACCAGGCCGAGGGGGT...CCTAAATGAGTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | ACACACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTGGTGGCGGTGCTGGTaGTCCCCCAGCTCCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: THKARSKPKGTVRERNPNWWRCW*SPSSRE Trigger: CTCCCTGGAGCTGGGGGACCACCAGCACCGCCACCA...GTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR TCA 90 bp | CAGGTGAATTGGGAAGCTGCCAGCGGAGCAGAATCTAGATGGCAGAGTGAGTGTAGAACGGGGTGGGAGTaGGATAAACCAGCTGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: QVNWEAASGAESRWQSECRTGWE*DKPAES Trigger: ACTCTCAGCTGGTTTATCTCACTCCCACCCCGTTCT...ACACTCACTCTGCCATCTAGATTCTGCTCCGCTGGCAGCTTCCCAATTCACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR TCA 90 bp | CAGGTGAATTGGGAAGCTGCCAGCGGAGCAGAATCTAGATGGCAGAGTGAGTGTCTCTTCTCTCCTCATTaGTTGGTGCTGGTGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: QVNWEAASGAESRWQSECLFSPH*LVLVVV Trigger: CACCACCACCAGCACCAATCAATGAGGAGAGAAGAG...ACACTCACTCTGCCATCTAGATTCTGCTCCGCTGGCAGCTTCCCAATTCACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR GCA 90 bp | ACACACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACCTCCTCCTCCTCCTCTaGATGGCGGCGGAGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: THKARSKPKGTVRERNPNLLLLL*MAAEVV Trigger: CACCACCTCCGCCGCCATGCAGAGGAGGAGGAGGAG...GTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR GCA 90 bp | AGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACTCATTTAGGTGGTGGTGGTGGCGGTaGTGGTGGTCCCCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RSKPKGTVRERNPNYSFRWWWWR*WWSPSS Trigger: GGAGCTGGGGGACCACCAGCACCGCCACCACCACCA...CCTAAATGAGTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | GTAGACCAGGCTGGTCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCTTCTGAGTCTCTGGTTTTCATaGTCCTGGAGGAGGTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: VDQAGLELRNPPASASLLSLWFS*SWRRLE Trigger: TTCCAACCTCCTCCAGGACCATGAAAACCAGAGACT...CAGAAGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGACCAGCCTGGTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | AGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACTCATTTAGGTGGCGGCGGAGGTGGTaGGAGTGGCTCTTGGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: RSKPKGTVRERNPNYSFRWRRRW*EWLLAP Trigger: AGGCGCCAAGAGCCACTCCCACCACCTCCGCCGCCA...CCTAAATGAGTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | ACACACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTCCTCCTCCTCTGCATaGCGGCGGAGGTGGTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: THKARSKPKGTVRERNPNSSSSA*RRRWWE Trigger: CTCCCACCACCTCCGCCGCCATGCAGAGGAGGAGGA...GTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | AGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACTCATTTAGGTGGTGGGGGCCCTCGTaGTGTTGGTGGAGGTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: RSKPKGTVRERNPNYSFRWWGPS*CWWRWG Trigger: GCCCCACCTCCACCAACACCACGAGGGCCCCCACCA...CCTAAATGAGTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | CACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACGTGTGGGGGCACAGGTaGGAGCCCTCCTCTTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: HKARSKPKGTVRERNPNYVWGHR*EPSSSL Trigger: GAGAGAAGAGGAGGGCTCCCACCTGTGCCCCCACAC...GTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | CACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACCGGAGGTGGTGGGAGTaGCTCTTGGCGCCTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: HKARSKPKGTVRERNPNYRRWWE*LLAPHL Trigger: GAGATGAGGCGCCAAGAGCCACTCCCACCACCTCCG...GTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | CACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACGGAGGTCTCAGAGGCTaGCCTCCTCCTCCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: HKARSKPKGTVRERNPNYGGLRG*PPPPPP Trigger: AGGAGGAGGAGGAGGAGGCCAGCCTCTGAGACCTCC...GTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | ACACACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACAGATCGTCCAGTGGCTaGAGGGGGTGGTGGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: THKARSKPKGTVRERNPNRSSSG*RGWWRR Trigger: CCTCCTCCACCACCCCCTCCAGCCACTGGACGATCT...GTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | ACACACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACGTCCAGATCGTCCAGTaGCTGGAGGGGGTGGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: THKARSKPKGTVRERNPNVQIVQ*LEGVVE Trigger: CTCCACCACCCCCTCCAGCCACTGGACGATCTGGAC...GTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | AGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACTCATTTAGGAGGGCAGGGTGGAGGTaGTGGTGGTGGTGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: RSKPKGTVRERNPNYSFRRAGWR*WWWWWW Trigger: CCACCACCACCACCACCACCACCTCCACCCTGCCCT...CCTAAATGAGTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR TCA 90 bp | ACACACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACAGGGGGCAGTGGACCTaGGCGACCCTTATTACTCCC | + |
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Preference number: 4 (lower is better) Translates to: THKARSKPKGTVRERNPNRGQWT*ATLITP Trigger: GGGAGTAATAAGGGTCGCTCAGGTCCACTGCCCCCT...GTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR GCA 90 bp | ACACACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTGGCGCCTCATCTCCTaGCGGACAGCCTCTAGACCT | + |
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Preference number: 4 (lower is better) Translates to: THKARSKPKGTVRERNPNWRLIS*RTASRP Trigger: AGGTCTAGAGGCTGTCCGGCAGGAGATGAGGCGCCA...GTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | ACACACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACCCCCGCAGTGTTCCATaGTCCAGTGCTCAGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: THKARSKPKGTVRERNPNPRSVP*SSAQLQ Trigger: CTGGAGCTGAGCACTGGACCATGGAACACTGCGGGG...GTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | ACACACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTCTGCGTCAGTGAGCTaGGCCTCGCTGATTCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: THKARSKPKGTVRERNPNSASVS*ASLIPA Trigger: GGCAGGAATCAGCGAGGCCCAGCTCACTGACGCAGA...GTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | ACACACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACGAGTGGAGGAGGTGGTaGTCCAGATCGTCCAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: THKARSKPKGTVRERNPNEWRRW*SRSSSG Trigger: GCCACTGGACGATCTGGACCACCACCTCCTCCACTC...GTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR TCA 90 bp | CAGGTGAATTGGGAAGCTGCCAGCGGAGCAGAATCTAGATGGCAGAGTGAGTGTGGTATCGTGAACTTGTaGTGTCAGGGTTCTGAATGT | + |
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Preference number: 4 (lower is better) Translates to: QVNWEAASGAESRWQSECGIVNL*CQGSEC Trigger: ACATTCAGAACCCTGACATCACAAGTTCACGATACC...ACACTCACTCTGCCATCTAGATTCTGCTCCGCTGGCAGCTTCCCAATTCACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | AGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACTCATTTAGGAAGGCCCGGAAGGCCTaGGCTTCACTCTCATCCGCA | + |
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Preference number: 4 (lower is better) Translates to: RSKPKGTVRERNPNYSFRKARKA*ASLSSA Trigger: TGCGGATGAGAGTGAAGCCCAGGCCTTCCGGGCCTT...CCTAAATGAGTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | ACACACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACGCGTTTCTTATCAGTTaGGCCAGGGCCAGGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: THKARSKPKGTVRERNPNAFLIS*ARARCR Trigger: CCTGCACCTGGCCCTGGCCCAACTGATAAGAAACGC...GTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR CCA 90 bp | CACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACATTCCCTGCCGGATTTaGTCCAAAAGTGCACCCCGG | + |
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Preference number: 4 (lower is better) Translates to: HKARSKPKGTVRERNPNYIPCRI*SKSAPR Trigger: CCGGGGTGCACTTTTGGACCAAATCCGGCAGGGAAT...GTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR TCA 90 bp | CACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACGGCCATAAAGGCGGATaGAGTAGGACTTCTGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: HKARSKPKGTVRERNPNYGHKGG*SRTSEG Trigger: ACCCTCAGAAGTCCTACTTCATCCGCCTTTATGGCC...GTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS-3UTR GCA 90 bp | ACACACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTTTTGTATCTTCTCCTaGACCAAGGCCCGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: THKARSKPKGTVRERNPNFCIFS*TKARKA Trigger: GGCCTTCCGGGCCTTGGTGCAGGAGAAGATACAAAA...GTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS-3UTR CCA 90 bp | CACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACACATCAAATCCATTCTaGGGATCCCAGCCCACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HKARSKPKGTVRERNPNYTSNPF*GSQPTW Trigger: CCACGTGGGCTGGGATCCCCAGAATGGATTTGATGT...GTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS-3UTR TCA 90 bp | AGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACTCATTTAGGGAGCCCACGGTATCGTaGACTTGTGATGTCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RSKPKGTVRERNPNYSFREPTVS*TCDVRV Trigger: AACCCTGACATCACAAGTTCACGATACCGTGGGCTC...CCTAAATGAGTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS-3UTR GCA 90 bp | CACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACACTCTACTCCTCTTCTaGATGACATGCATCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HKARSKPKGTVRERNPNYTLLLF*MTCIRA Trigger: TGCCCTGATGCATGTCATGCAGAAGAGGAGTAGAGT...GTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS-3UTR CCA 90 bp | AGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACTCATTTAGGAGCTCAAAGAGTCTCTaGTTTTCATGGTCCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSKPKGTVRERNPNYSFRSSKSL*FSWSWR Trigger: CCTCCAGGACCATGAAAACCAGAGACTCTTTGAGCT...CCTAAATGAGTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS-3UTR GCA 90 bp | AGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACTCATTTAGGTTTGAATCCACTCGGTaGTCCGATATCAGCTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSKPKGTVRERNPNYSFRFESTR*SDISFA Trigger: AGCAAAGCTGATATCGGAGCACCGAGTGGATTCAAA...CCTAAATGAGTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS-3UTR CCA 90 bp | AGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACTCATTTAGGCCTTCATCTGAGGAATaGATGACTCTACTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSKPKGTVRERNPNYSFRPSSEE*MTLLLF Trigger: GAAGAGGAGTAGAGTCATCCATTCCTCAGATGAAGG...CCTAAATGAGTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS CCA 90 bp | GGCGGGCCCACTCCCAGGGCAGGGTGGAGGTGGTGGTGGTGGTGGTaGTGGTGGCGGTGCTGGTGGTCCCCCAGCTCCAGGGAGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGPTPRAGWRWWWWW*WWRCWWSPSSREWR Trigger: CCTCCACTCCCTGGAGCTGGGGGACCACCAGCACCGCCACCACCACCACCACCACCACCACCTCCACCCTGCCCTGGGAGTGGGCCCGCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS CCA 90 bp | TGGTGGTGGTGGTGGCGGTGCTGGTGGTCCCCCAGCTCCAGGGAGTaGAGGAGGTGGTGGTCCAGATCGTCCAGTGGCTGGAGGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WWWWWRCWWSPSSRE*RRWWSRSSSGWRGW Trigger: CCACCCCCTCCAGCCACTGGACGATCTGGACCACCACCTCCTCCACTCCCTGGAGCTGGGGGACCACCAGCACCGCCACCACCACCACCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS CCA 90 bp | TCCTCCTCCTCCTCCTCCTCCTCCTCCTCTGCATGGCGGCGGAGGTaGTGGGAGTGGCTCTTGGCGCCTCATCTCCTGCCGGACAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSSSSSSAWRRR*WEWLLAPHLLPDSL Trigger: GAGGCTGTCCGGCAGGAGATGAGGCGCCAAGAGCCACTCCCACCACCTCCGCCGCCATGCAGAGGAGGAGGAGGAGGAGGAGGAGGAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS GCA 90 bp | CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTaGATGGCGGCGGAGGTGGTGGGAGTGGCTCTTGGCGCCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLLLLLLLLLLLLL*MAAEVVGVALGASS Trigger: AGATGAGGCGCCAAGAGCCACTCCCACCACCTCCGCCGCCATGCAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS-3UTR CAA 90 bp | GTAGACCAGGCTGGTCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCTTCTGTGGTGGGAGTGGCTCTaGGCGCCTCATCTCCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: VDQAGLELRNPPASASLLWWEWL*APHLLP Trigger: CGGCAGGAGATGAGGCGCCAAGAGCCACTCCCACCA...CAGAAGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGACCAGCCTGGTCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS GCA 90 bp | AGCCCCGCAGTGTTCCATGGTCCAGTGCTCAGCTCCAGGGGGCAGTaGCAGGTAGAGCTGAACAACTGTGGTAGCCAGTGTCCAGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: SPAVFHGPVLSSRGQ*QVELNNCGSQCPAF Trigger: AAATGCTGGACACTGGCTACCACAGTTGTTCAGCTCTACCTGGCACTGCCCCCTGGAGCTGAGCACTGGACCATGGAACACTGCGGGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS GCA 90 bp | TTCTGCATGACATGCATCAGGGCACCTACTAGGCCTTCTGACTGCTaGGCGGGTGGTTGCTGTACTGAGTTCTCTAGAGCTCCAGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FCMTCIRAPTRPSDC*AGGCCTEFSRAPGV Trigger: GACCCCTGGAGCTCTAGAGAACTCAGTACAGCAACCACCCGCGCAGCAGTCAGAAGGCCTAGTAGGTGCCCTGATGCATGTCATGCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS GCA 90 bp | CTCTTCTGCATGACATGCATCAGGGCACCTACTAGGCCTTCTGACTaGTGCGCGGGTGGTTGCTGTACTGAGTTCTCTAGAGCTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LFCMTCIRAPTRPSD*CAGGCCTEFSRAPG Trigger: CCCTGGAGCTCTAGAGAACTCAGTACAGCAACCACCCGCGCAGCAGTCAGAAGGCCTAGTAGGTGCCCTGATGCATGTCATGCAGAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS-3UTR CAA 90 bp | ACACACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACGGGGCCCTCGTGGTGTaGGTGGAGGTGGGGCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: THKARSKPKGTVRERNPNGALVV*VEVGHP Trigger: GGGGTGCCCCACCTCCACCAACACCACGAGGGCCCC...GTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS GCA 90 bp | CCTTCATCTGAGGAATGGATGACTCTACTCCTCTTCTGCATGACATaGATCAGGGCACCTACTAGGCCTTCTGACTGCTGCGCGGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PSSEEWMTLLLFCMT*IRAPTRPSDCCAGG Trigger: ACCACCCGCGCAGCAGTCAGAAGGCCTAGTAGGTGCCCTGATGCATGTCATGCAGAAGAGGAGTAGAGTCATCCATTCCTCAGATGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS-3UTR CAA 90 bp | CAGGTGAATTGGGAAGCTGCCAGCGGAGCAGAATCTAGATGGCAGAGTGAGTGTAATTCCCTGCCGGATTaGGTCCAAAAGTGCACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QVNWEAASGAESRWQSECNSLPD*VQKCTP Trigger: CGGGGTGCACTTTTGGACCAAATCCGGCAGGGAATT...ACACTCACTCTGCCATCTAGATTCTGCTCCGCTGGCAGCTTCCCAATTCACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS TCA 90 bp | CTTGACAGTCATCTCCAGCAAAAGTGTGGAAGAACGGGGTGGGAGTaGGATAAACCAGCTGAGAGTACAGCTCCTGTTCCCAGAGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LDSHLQQKCGRTGWE*DKPAESTAPVPRVA Trigger: GGCTACTCTGGGAACAGGAGCTGTACTCTCAGCTGGTTTATCTCACTCCCACCCCGTTCTTCCACACTTTTGCTGGAGATGACTGTCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS-3UTR CAA 90 bp | CAGGTGAATTGGGAAGCTGCCAGCGGAGCAGAATCTAGATGGCAGAGTGAGTGTCCTCTGATTCCTTTTTaGTATCTTCTCCTGCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: QVNWEAASGAESRWQSECPLIPF*YLLLHQ Trigger: TTGGTGCAGGAGAAGATACAAAAAAGGAATCAGAGG...ACACTCACTCTGCCATCTAGATTCTGCTCCGCTGGCAGCTTCCCAATTCACCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS-3UTR CAA 90 bp | AGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACTCATTTAGGAGCGTTTCTTATCAGTaGGGCCAGGGCCAGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RSKPKGTVRERNPNYSFRSVSYQ*GQGQVQ Trigger: CTGCACCTGGCCCTGGCCCAACTGATAAGAAACGCT...CCTAAATGAGTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS-3UTR CAA 90 bp | AGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACTCATTTAGGACGTGGCTGACATGTTaGAATCCACTCGGTGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: RSKPKGTVRERNPNYSFRTWLTC*NPLGAP Trigger: CGGAGCACCGAGTGGATTCAAACATGTCAGCCACGT...CCTAAATGAGTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS-3UTR CAA 90 bp | ACACACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACGCTCCGATATCAGCTTaGCTGATCTTCTTTTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: THKARSKPKGTVRERNPNAPISA*LIFFFP Trigger: AGGGAAAAAGAAGATCAGCAAAGCTGATATCGGAGC...GTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS-3UTR CAA 90 bp | ACACACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACAGATCCGGGTCTAGGTaGTTCACATCAAATCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: THKARSKPKGTVRERNPNRSGSR*FTSNPF Trigger: GAATGGATTTGATGTGAACAACCTAGACCCGGATCT...GTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS-3UTR CAA 90 bp | CACAAAGCAAGATCAAAGCCAAAAGGGACTGTGAGGGAAAGAAACCCAAACTACAAAGTTCAGTCCTACTaGACAGTCATCTCCAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HKARSKPKGTVRERNPNYKVQSY*TVISSK Trigger: TTTGCTGGAGATGACTGTCAAGTAGGACTGAACTTT...GTAGTTTGGGTTTCTTTCCCTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS CCA 72 bp | GAGCGGGGGAGGGGCGGGCCCACTCCCAGGGCAGGGTaGAGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ERGRGGPTPRAG*RWWWWWWWWRC Trigger: GCACCGCCACCACCACCACCACCACCACCACCTCCACCCTGCCCTGGGAGTGGGCCCGCCCCTCCCCCGCTC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS CCA 72 bp | GGCGGGCCCACTCCCAGGGCAGGGTGGAGGTGGTGGTaGTGGTGGTGGTGGTGGCGGTGCTGGTGGTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GGPTPRAGWRWW*WWWWWRCWWSP Trigger: GGGGGACCACCAGCACCGCCACCACCACCACCACCACCACCACCTCCACCCTGCCCTGGGAGTGGGCCCGCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS CCA 72 bp | GGGAGGGGCGGGCCCACTCCCAGGGCAGGGTGGAGGTaGTGGTGGTGGTGGTGGTGGTGGCGGTGCTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GRGGPTPRAGWR*WWWWWWWRCWW Trigger: CCACCAGCACCGCCACCACCACCACCACCACCACCACCTCCACCCTGCCCTGGGAGTGGGCCCGCCCCTCCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS CCA 72 bp | GGGCCCACTCCCAGGGCAGGGTGGAGGTGGTGGTGGTaGTGGTGGTGGTGGCGGTGCTGGTGGTCCCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GPTPRAGWRWWW*WWWWRCWWSPS Trigger: GCTGGGGGACCACCAGCACCGCCACCACCACCACCACCACCACCACCTCCACCCTGCCCTGGGAGTGGGCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS CCA 72 bp | AGGGGCGGGCCCACTCCCAGGGCAGGGTGGAGGTGGTaGTGGTGGTGGTGGTGGTGGCGGTGCTGGTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RGGPTPRAGWRW*WWWWWWRCWWS Trigger: GGACCACCAGCACCGCCACCACCACCACCACCACCACCACCTCCACCCTGCCCTGGGAGTGGGCCCGCCCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS CCA 72 bp | CCCACTCCCAGGGCAGGGTGGAGGTGGTGGTGGTGGTaGTGGTGGTGGCGGTGCTGGTGGTCCCCCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PTPRAGWRWWWW*WWWRCWWSPSS Trigger: GGAGCTGGGGGACCACCAGCACCGCCACCACCACCACCACCACCACCACCTCCACCCTGCCCTGGGAGTGGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS CCA 72 bp | AGGTGGTGGTCCAGATCGTCCAGTGGCTGGAGGGGGTaGTGGAGGAGGACCCCCTCGGCCTGGTGGTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RWWSRSSSGWRG*WRRTPSAWWWG Trigger: CCCCCACCACCAGGCCGAGGGGGTCCTCCTCCACCACCCCCTCCAGCCACTGGACGATCTGGACCACCACCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS CCA 72 bp | AGGGCAGGGTGGAGGTGGTGGTGGTGGTGGTGGTGGTaGCGGTGCTGGTGGTCCCCCAGCTCCAGGGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RAGWRWWWWWWW*RCWWSPSSREW Trigger: CCACTCCCTGGAGCTGGGGGACCACCAGCACCGCCACCACCACCACCACCACCACCACCTCCACCCTGCCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS GCA 72 bp | CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTaGATGGCGGCGGAGGTGGTGGGAGTGGCTCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLLLLLLLLLLL*MAAEVVGVALG Trigger: GCCAAGAGCCACTCCCACCACCTCCGCCGCCATGCAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS CCA 72 bp | TCCTCCTCCTCTGCATGGCGGCGGAGGTGGTGGGAGTaGCTCTTGGCGCCTCATCTCCTGCCGGACAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSAWRRRWWE*LLAPHLLPDSL Trigger: GAGGCTGTCCGGCAGGAGATGAGGCGCCAAGAGCCACTCCCACCACCTCCGCCGCCATGCAGAGGAGGAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS CCA 72 bp | TCCTCCTCCTCCTCCTCTGCATGGCGGCGGAGGTGGTaGGAGTGGCTCTTGGCGCCTCATCTCCTGCCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSSAWRRRW*EWLLAPHLLPD Trigger: GTCCGGCAGGAGATGAGGCGCCAAGAGCCACTCCCACCACCTCCGCCGCCATGCAGAGGAGGAGGAGGAGGA 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS CCA 72 bp | TCCTCCTCCTCCTCCTCCTCTGCATGGCGGCGGAGGTaGTGGGAGTGGCTCTTGGCGCCTCATCTCCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSSSAWRRR*WEWLLAPHLLP Trigger: CGGCAGGAGATGAGGCGCCAAGAGCCACTCCCACCACCTCCGCCGCCATGCAGAGGAGGAGGAGGAGGAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS CCA 72 bp | TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTGCATaGCGGCGGAGGTGGTGGGAGTGGCTCTTGGCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSSSSSSSA*RRRWWEWLLAP Trigger: AGGCGCCAAGAGCCACTCCCACCACCTCCGCCGCCATGCAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS GCA 72 bp | GGAGGTGGTGGGAGTGGCTCTTGGCGCCTCATCTCCTaGCGGACAGCCTCTAGACCTCCCTGGTCCTCAATA | + |
|
Preference number: 6 (lower is better) Translates to: GGGGSGSWRLIS*RTASRPPWSSI Trigger: TATTGAGGACCAGGGAGGTCTAGAGGCTGTCCGGCAGGAGATGAGGCGCCAAGAGCCACTCCCACCACCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS CCA 72 bp | TATCCTTCACGAAGCACACAGCCCCGCAGTGTTCCATaGTCCAGTGCTCAGCTCCAGGGGGCAGTGCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: YPSRSTQPRSVP*SSAQLQGAVPG Trigger: ACCTGGCACTGCCCCCTGGAGCTGAGCACTGGACCATGGAACACTGCGGGGCTGTGTGCTTCGTGAAGGATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS TCA 72 bp | TGGGCCAGGGCCAGGTGCAGGGAGCCCACGGTATCGTaGACTTGTGATGTCAGGGTTCTGAATGTCGACCGT | + |
|
Preference number: 6 (lower is better) Translates to: WARARCREPTVS*TCDVRVLNVDR Trigger: ACGGTCGACATTCAGAACCCTGACATCACAAGTTCACGATACCGTGGGCTCCCTGCACCTGGCCCTGGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS GCA 72 bp | ACATGCATCAGGGCACCTACTAGGCCTTCTGACTGCTaGGCGGGTGGTTGCTGTACTGAGTTCTCTAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TCIRAPTRPSDC*AGGCCTEFSRA Trigger: AGCTCTAGAGAACTCAGTACAGCAACCACCCGCGCAGCAGTCAGAAGGCCTAGTAGGTGCCCTGATGCATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS GCA 72 bp | GTCCTCAATAAAATCGTAGATGAGCTTGGAGGTCTCTaGGTCAGTGAGCTGGGCCTCGCTGATTCCTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: VLNKIVDELGGL*VSELGLADSCP Trigger: AGGGCAGGAATCAGCGAGGCCCAGCTCACTGACGCAGAGACCTCCAAGCTCATCTACGATTTTATTGAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS GCA 72 bp | ATGACATGCATCAGGGCACCTACTAGGCCTTCTGACTaGTGCGCGGGTGGTTGCTGTACTGAGTTCTCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: MTCIRAPTRPSD*CAGGCCTEFSR Trigger: TCTAGAGAACTCAGTACAGCAACCACCCGCGCAGCAGTCAGAAGGCCTAGTAGGTGCCCTGATGCATGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS CAA 72 bp | CTGGCGTCTTTCTCCGCTTTGCCTCTGATTCCTTTTTaGTATCTTCTCCTGCACCAAGGCCCGGAAGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LASFSALPLIPF*YLLLHQGPEGL Trigger: CAGGCCTTCCGGGCCTTGGTGCAGGAGAAGATACAAAAAAGGAATCAGAGGCAAAGCGGAGAAAGACGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS TCA 72 bp | AGAGTAGCCGACCAGCCTGTAGGCCATAAAGGCGGATaGAGTAGGACTTCTGAGGGTTATCCTTCACGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: RVADQPVGHKGG*SRTSEGYPSRS Trigger: GCTTCGTGAAGGATAACCCTCAGAAGTCCTACTTCATCCGCCTTTATGGCCTACAGGCTGGTCGGCTACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS TCA 72 bp | CATCTCCAGCAAAAGTGTGGAAGAACGGGGTGGGAGTaGGATAAACCAGCTGAGAGTACAGCTCCTGTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: HLQQKCGRTGWE*DKPAESTAPVP Trigger: GGGAACAGGAGCTGTACTCTCAGCTGGTTTATCTCACTCCCACCCCGTTCTTCCACACTTTTGCTGGAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS TCA 72 bp | ACTGAGTTCTCTAGAGCTCCAGGGGTCTTGTTCAGCTaGATTCCCTGCCGGATTTGGTCCAAAAGTGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: TEFSRAPGVLFS*IPCRIWSKSAP Trigger: GGGTGCACTTTTGGACCAAATCCGGCAGGGAATTCAGCTGAACAAGACCCCTGGAGCTCTAGAGAACTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS CCA 72 bp | TTTTGTATCTTCTCCTGCACCAAGGCCCGGAAGGCCTaGGCTTCACTCTCATCCGCAAAGTTCAGTCCTACT | + |
|
Preference number: 6 (lower is better) Translates to: FCIFSCTKARKA*ASLSSAKFSPT Trigger: AGTAGGACTGAACTTTGCGGATGAGAGTGAAGCCCAGGCCTTCCGGGCCTTGGTGCAGGAGAAGATACAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS TCA 72 bp | TGCTCCGATATCAGCTTTGCTGATCTTCTTTTTCCCTaGGCGTTTCTTATCAGTTGGGCCAGGGCCAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: CSDISFADLLFP*AFLISWARARC Trigger: GCACCTGGCCCTGGCCCAACTGATAAGAAACGCTCAGGGAAAAAGAAGATCAGCAAAGCTGATATCGGAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
||
| CDS GCA 72 bp | CCAGCCCACGTGGCTGACATGTTTGAATCCACTCGGTaGTCCGATATCAGCTTTGCTGATCTTCTTTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: PAHVADMFESTR*SDISFADLLFP Trigger: GGGAAAAAGAAGATCAGCAAAGCTGATATCGGAGCACCGAGTGGATTCAAACATGTCAGCCACGTGGGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS CCA 72 bp | TTCACATCAAATCCATTCTGGGGATCCCAGCCCACGTaGCTGACATGTTTGAATCCACTCGGTGCTCCGATA | + |
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Preference number: 6 (lower is better) Translates to: FTSNPFWGSQPT*LTCLNPLGAPI Trigger: TATCGGAGCACCGAGTGGATTCAAACATGTCAGCCACGTGGGCTGGGATCCCCAGAATGGATTTGATGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS TCA 72 bp | TGGGCTTCACTCTCATCCGCAAAGTTCAGTCCTACTTaGCAGTCATCTCCAGCAAAAGTGTGGAAGAACGGG | + |
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Preference number: 6 (lower is better) Translates to: WASLSSAKFSPT*QSSPAKVWKNG Trigger: CCCGTTCTTCCACACTTTTGCTGGAGATGACTGTCAAGTAGGACTGAACTTTGCGGATGAGAGTGAAGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS TCA 72 bp | AGCCCACGGTATCGTGAACTTGTGATGTCAGGGTTCTaGATGTCGACCGTCACAAGTCCTAGAGATAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SPRYRELVMSGF*MSTVTSPRDSG Trigger: TCCACTATCTCTAGGACTTGTGACGGTCGACATTCAGAACCCTGACATCACAAGTTCACGATACCGTGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS TCA 72 bp | TCATCCCATTCATCATCCTCTTCATCCTCGCCGGTCTaGTCCTCCCCTTCATCTGAGGAATGGATGACTCTA | + |
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Preference number: 6 (lower is better) Translates to: SSHSSSSSSSPV*SSPSSEEWMTL Trigger: TAGAGTCATCCATTCCTCAGATGAAGGGGAGGATCAGACCGGCGAGGATGAAGAGGATGATGAATGGGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS CCA 72 bp | GTCCAGCATTTTCGGCCAAGAAGCTCAAAGAGTCTCTaGTTTTCATGGTCCTGGAGGAGGTTGGAAGGAATG | + |
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Preference number: 6 (lower is better) Translates to: VQHFRPRSSKSL*FSWSWRRLEGM Trigger: CATTCCTTCCAACCTCCTCCAGGACCATGAAAACCAGAGACTCTTTGAGCTTCTTGGCCGAAAATGCTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS CCA 72 bp | AGATCCGGGTCTAGGTTGTTCACATCAAATCCATTCTaGGGATCCCAGCCCACGTGGCTGACATGTTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: RSGSRLFTSNPF*GSQPTWLTCLN Trigger: ATTCAAACATGTCAGCCACGTGGGCTGGGATCCCCAGAATGGATTTGATGTGAACAACCTAGACCCGGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS CAA 72 bp | CTGGGCTTCACTCTCATCCGCAAAGTTCAGTCCTACTaGACAGTCATCTCCAGCAAAAGTGTGGAAGAACGG | + |
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Preference number: 6 (lower is better) Translates to: LGFTLIRKVQSY*TVISSKSVEER Trigger: CCGTTCTTCCACACTTTTGCTGGAGATGACTGTCAAGTAGGACTGAACTTTGCGGATGAGAGTGAAGCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS CAA 90 bp | ACGTGGCTGACATGTTTGAATCCACTCGGTGCTCCGATATCAGCTTaGCTGATCTTCTTTTTCCCTGAGCGTTTCTTATCAGTTGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: TWLTCLNPLGAPISA*LIFFFPERFLSVGP Trigger: TGGCCCAACTGATAAGAAACGCTCAGGGAAAAAGAAGATCAGCAAAGCTGATATCGGAGCACCGAGTGGATTCAAACATGTCAGCCACGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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| CDS CAA 72 bp | ACATGTTTGAATCCACTCGGTGCTCCGATATCAGCTTaGCTGATCTTCTTTTTCCCTGAGCGTTTCTTATCA | + |
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Preference number: 6 (lower is better) Translates to: TCLNPLGAPISA*LIFFFPERFLS Trigger: TGATAAGAAACGCTCAGGGAAAAAGAAGATCAGCAAAGCTGATATCGGAGCACCGAGTGGATTCAAACATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033505.7 |
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