Pregenerated sensors for WARS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004233Ensembl transcript IDs: ENSMUST00000004343.7, ENSMUST00000135960.8, ENSMUST00000145650.8, ENSMUST00000198044.2
Found 268 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTACTGCGCACCACCTCCTCCACCGAGAGGCCCGACACGGCCGCGTaGATCGCCACCATGTTGGAAACACCAGCTCTGCTGTCCGGCTCG | + |
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Preference number: 1 (lower is better) Translates to: LLRTTSSTERPDTAA*IATMLETPALLSGS Trigger: CGAGCCGGACAGCAGAGCTGGTGTTTCCAACATGGTGGCGATCCACGCGGCCGTGTCGGGCCTCTCGGTGGAGGAGGTGGTGCGCAGTAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
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| 3UTR GCA 90 bp | GTAGGAACCAGGAGTGCCCTGGTGCCACCGCATCAGAATGCCTTGTaGACAGCAGGCAGCTCTGCTGTCCCACCGCTTGTCTCGCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: VGTRSALVPPHQNAL*TAGSSAVPPLVSQE Trigger: CTCCTGCGAGACAAGCGGTGGGACAGCAGAGCTGCCTGCTGTGCACAAGGCATTCTGATGCGGTGGCACCAGGGCACTCCTGGTTCCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
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| 3UTR GCA 90 bp | TGTGTACTCATACCATGGCAGACAAGCGGAGGTCAGAGGACAACCTaGCAGTCAGTTTCTCCTTCCACCATGCTGGCCCTGTGGATTGAG | + |
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Preference number: 1 (lower is better) Translates to: CVLIPWQTSGGQRTT*QSVSPSTMLALWIE Trigger: CTCAATCCACAGGGCCAGCATGGTGGAAGGAGAAACTGACTGGCAGGTTGTCCTCTGACCTCCGCTTGTCTGCCATGGTATGAGTACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR TCA 90 bp | CCCTGTGGATTGAGCTCCAGCTATTCAGCTTGGCAGCAGGTACCTTaGGCCCGAGCCACCTTGCTAGCACAAGTCAAGTCATTCCAATAC | + |
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Preference number: 1 (lower is better) Translates to: PCGLSSSYSAWQQVP*ARATLLAQVKSFQY Trigger: GTATTGGAATGACTTGACTTGTGCTAGCAAGGTGGCTCGGGCTCAAGGTACCTGCTGCCAAGCTGAATAGCTGGAGCTCAATCCACAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR TCA 90 bp | CATGTTGGAAACACCAGCTCTGCTGTCCGGCTCGTAGGTGACCTCTaGCGTGAAGTCTGTCACAGCCTTGCGGAATTTCTGTACAATCTC | + |
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Preference number: 1 (lower is better) Translates to: HVGNTSSAVRLVGDL*REVCHSLAEFLYNL Trigger: GAGATTGTACAGAAATTCCGCAAGGCTGTGACAGACTTCACGTCAGAGGTCACCTACGAGCCGGACAGCAGAGCTGGTGTTTCCAACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
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| 3UTR CCA 90 bp | CGTGAAGTCTGTCACAGCCTTGCGGAATTTCTGTACAATCTCCTCTaGGCTGTCTGTTATTCGAACAGTGGCGAGTTTGTCAGGGTCCGA | + |
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Preference number: 1 (lower is better) Translates to: REVCHSLAEFLYNLL*AVCYSNSGEFVRVR Trigger: TCGGACCCTGACAAACTCGCCACTGTTCGAATAACAGACAGCCCAGAGGAGATTGTACAGAAATTCCGCAAGGCTGTGACAGACTTCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
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| 3UTR TCA 90 bp | GTGGTGGAAGGAGAGAACCGGACCCCACTAATCATCCTCCAACCGTaGCAGACACACCTTAGCATGATCTCACCCATTCAAACACATACA | + |
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Preference number: 1 (lower is better) Translates to: VVEGENRTPLIILQP*QTHLSMISPIQTHT Trigger: TGTATGTGTTTGAATGGGTGAGATCATGCTAAGGTGTGTCTGTCACGGTTGGAGGATGATTAGTGGGGTCCGGTTCTCTCCTTCCACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR TCA 90 bp | AGGGGCCGCCTCAAAAATGTGGGAAAGGCCAGTTTGTTCTTTCCTTaGGCTGACCCATCTTGGAATGTCATAGTTTATGGTTCCCAGACT | + |
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Preference number: 1 (lower is better) Translates to: RGRLKNVGKASLFFP*ADPSWNVIVYGSQT Trigger: AGTCTGGGAACCATAAACTATGACATTCCAAGATGGGTCAGCTCAAGGAAAGAACAAACTGGCCTTTCCCACATTTTTGAGGCGGCCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
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| 3UTR CCA 90 bp | GGAATCTACCACTTAAGAAGAGCTCTAACTTCGAGTTTTCTTTCTTaGCCTGAGTTCCTGGGCAGGGCCAACATACTGGCCAGTGAAAGA | + |
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Preference number: 1 (lower is better) Translates to: GIYHLRRALTSSFLS*PEFLGRANILASER Trigger: TCTTTCACTGGCCAGTATGTTGGCCCTGCCCAGGAACTCAGGCCAAGAAAGAAAACTCGAAGTTAGAGCTCTTCTTAAGTGGTAGATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
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| 3UTR GCA 90 bp | ACCTGTCTGCACAACACAGACAAAGTGCACCTGCACAGTAAATACTaGACAAGCAAGCACACGCCATGGCTCAGTAATTGTTCACGTTTT | + |
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Preference number: 1 (lower is better) Translates to: TCLHNTDKVHLHSKY*TSKHTPWLSNCSRF Trigger: AAAACGTGAACAATTACTGAGCCATGGCGTGTGCTTGCTTGTGCAGTATTTACTGTGCAGGTGCACTTTGTCTGTGTTGTGCAGACAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR CCA 90 bp | GGAATTTCTGTACAATCTCCTCTGGGCTGTCTGTTATTCGAACAGTaGCGAGTTTGTCAGGGTCCGATTTTGACATCTTGGAAGAAGGGT | + |
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Preference number: 1 (lower is better) Translates to: GISVQSPLGCLLFEQ*RVCQGPILTSWKKG Trigger: ACCCTTCTTCCAAGATGTCAAAATCGGACCCTGACAAACTCGCCACTGTTCGAATAACAGACAGCCCAGAGGAGATTGTACAGAAATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
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| 3UTR TCA 90 bp | GCTGTCTGTTATTCGAACAGTGGCGAGTTTGTCAGGGTCCGATTTTaGCATCTTGGAAGAAGGGTCTCGAAGAGATTTCACTTTCTTCAT | + |
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Preference number: 1 (lower is better) Translates to: AVCYSNSGEFVRVRF*HLGRRVSKRFHFLH Trigger: ATGAAGAAAGTGAAATCTCTTCGAGACCCTTCTTCCAAGATGTCAAAATCGGACCCTGACAAACTCGCCACTGTTCGAATAACAGACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
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| 3UTR GCA 90 bp | CATCATCATCACATGAGCTGCAAGAATGAACCTCTCTTTATGAACTaGAAATACCCACTGGATTCAGGATTGCAGCATAGGACCTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: HHHHMSCKNEPLFMN*KYPLDSGLQHRTCL Trigger: CAGACAGGTCCTATGCTGCAATCCTGAATCCAGTGGGTATTTGCAGTTCATAAAGAGAGGTTCATTCTTGCAGCTCATGTGATGATGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTAAGTCACAGTACAACGTTGAGGAGTTaGTTCTCTCCTTTATTTATCACATGGATCTCAGGGATTGAACTC | + |
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Preference number: 1 (lower is better) Translates to: VCVCVCVSHSTTLRS*FSPLFITWISGIEL Trigger: GAGTTCAATCCCTGAGATCCATGTGATAAATAAAGGAGAGAACCAACTCCTCAACGTTGTACTGTGACTTACACACACACACACACACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR TCA 90 bp | TTCTTAAGTGGTCCTTATCCATTTTCAATTTCTCAATCTCCTTCCTaGTTGGAGCAAATTTCTCAATCACAGCATCGGCCACTAGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: FLSGPYPFSISQSPS*LEQISQSQHRPLAA Trigger: AGCTGCTAGTGGCCGATGCTGTGATTGAGAAATTTGCTCCAATCAGGAAGGAGATTGAGAAATTGAAAATGGATAAGGACCACTTAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGCAGGCAGCTCTGCTGTCCCACCGCTTGTCTCGCAGGAGTGCATGGCAATCAAGAAAGCCTGCCCTaGGCCCCAGCCCGAGCCATT | + |
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Preference number: 2 (lower is better) Translates to: HSRQLCCPTACLAGVHGNQESLP*APARAI Trigger: AATGGCTCGGGCTGGGGCTCAGGGCAGGCTTTCTTG...ATTGCCATGCACTCCTGCGAGACAAGCGGTGGGACAGCAGAGCTGCCTGCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
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| 3UTR-3UTR GCA 90 bp | CACAGCAGGCAGCTCTGCTGTCCCACCGCTTGTCTCGCAGGAGTGCATGGCAATGTCTCCAAGAAAGCCTaGCCTGAGCCCCAGCCCGAG | + |
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Preference number: 2 (lower is better) Translates to: HSRQLCCPTACLAGVHGNVSKKA*PEPQPE Trigger: CTCGGGCTGGGGCTCAGGGCAGGCTTTCTTGGAGAC...ATTGCCATGCACTCCTGCGAGACAAGCGGTGGGACAGCAGAGCTGCCTGCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
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| 3UTR CAA 90 bp | CCTTCCACCATGCTGGCCCTGTGGATTGAGCTCCAGCTATTCAGCTaGGCAGCAGGTACCTTGAGCCCGAGCCACCTTGCTAGCACAAGT | + |
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Preference number: 2 (lower is better) Translates to: PSTMLALWIELQLFS*AAGTLSPSHLASTS Trigger: ACTTGTGCTAGCAAGGTGGCTCGGGCTCAAGGTACCTGCTGCCAAGCTGAATAGCTGGAGCTCAATCCACAGGGCCAGCATGGTGGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR CAA 90 bp | ATCAGAATGCCTTGTGCACAGCAGGCAGCTCTGCTGTCCCACCGCTaGTCTCGCAGGAGTGCATGGCAATTTGGTTCGCACGCAACGAAG | + |
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Preference number: 2 (lower is better) Translates to: IRMPCAQQAALLSHR*SRRSAWQFGSHATK Trigger: CTTCGTTGCGTGCGAACCAAATTGCCATGCACTCCTGCGAGACAAGCGGTGGGACAGCAGAGCTGCCTGCTGTGCACAAGGCATTCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGTGATTTCACAGAGCCTGAGGCAGGCTGAGACGGGAAGCTTCCCTTCACTGGGAGTGGAAGAGCTGTaGCTGCCTCAGGGATTGGAA | + |
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Preference number: 2 (lower is better) Translates to: SVISQSLRQAETGSFPSLGVEEL*LPQGLE Trigger: TTCCAATCCCTGAGGCAGGCACAGCTCTTCCACTCC...CAGTGAAGGGAAGCTTCCCGTCTCAGCCTGCCTCAGGCTCTGTGAAATCACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR-3UTR CCA 90 bp | CCACCGCATCAGAATGCCTTGTGCACAGCAGGCAGCTCTGCTGTCCCACCGCTTATAAAGCTTTGCGTGTaGCTGAGTTCTCGTGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: PPHQNALCTAGSSAVPPLIKLCV*LSSRVA Trigger: AGCCACACGAGAACTCAGCCACACGCAAAGCTTTAT...AAGCGGTGGGACAGCAGAGCTGCCTGCTGTGCACAAGGCATTCTGATGCGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTTTGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCATGCGCGGAGCCCTTTTCTGCTaGGCCATCTTGCTGGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: AFALSSDITHVLWHACMRGALFC*AILLAL Trigger: CAGGGCCAGCAAGATGGCTCAGCAGAAAAGGGCTCC...GCGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR-3UTR GCA 90 bp | CAATCCATCAAGGGGCCGCCTCAAAAATGTGGGAAAGGCCAGTTTGTTCTTTCCGTTTTGTGGCATGCATaGATGCGCACGTGCGCGCGC | + |
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Preference number: 2 (lower is better) Translates to: QSIKGPPQKCGKGQFVLSVLWHA*MRTCAR Trigger: GCGCGCGCACGTGCGCATGCATGCATGCCACAAAAC...GGAAAGAACAAACTGGCCTTTCCCACATTTTTGAGGCGGCCCCTTGATGGATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
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| 3UTR CAA 90 bp | GCCCTGTGGATTGAGCTCCAGCTATTCAGCTTGGCAGCAGGTACCTaGAGCCCGAGCCACCTTGCTAGCACAAGTCAAGTCATTCCAATA | + |
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Preference number: 2 (lower is better) Translates to: ALWIELQLFSLAAGT*SPSHLASTSQVIPI Trigger: TATTGGAATGACTTGACTTGTGCTAGCAAGGTGGCTCGGGCTCAAGGTACCTGCTGCCAAGCTGAATAGCTGGAGCTCAATCCACAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGGTACCTTGAGCCCGAGCCACCTTGCTAGCACAAGTCAAGTCATTCCAATAAGTGCAGTGACTGGCTaGCCTTGCTACAGAATCCCC | + |
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Preference number: 2 (lower is better) Translates to: AGTLSPSHLASTSQVIPISAVTG*PCYRIP Trigger: GGGGATTCTGTAGCAAGGTCAGCCAGTCACTGCACT...TATTGGAATGACTTGACTTGTGCTAGCAAGGTGGCTCGGGCTCAAGGTACCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
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| 3UTR-3UTR GCA 90 bp | CGTGCAGAGCTATACTCTGTGATTTCACAGAGCCTGAGGCAGGCTGAGACGGGACACTGGATTCAGGATTaGAGCATAGGACCTGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: RAELYSVISQSLRQAETGHWIQD*SIGPVC Trigger: GCAGACAGGTCCTATGCTGCAATCCTGAATCCAGTG...TCCCGTCTCAGCCTGCCTCAGGCTCTGTGAAATCACAGAGTATAGCTCTGCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCAGTCAGTTTCTCCTTCCACCATGCTGGCCCTGTGGATTGAGCTCCAGCTATGTGTGTCATTGAACTaGAGTGGAAGAGCTGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: CQSVSPSTMLALWIELQLCVSLN*SGRAVP Trigger: AGGCACAGCTCTTCCACTCCAGTTCAATGACACACA...TAGCTGGAGCTCAATCCACAGGGCCAGCATGGTGGAAGGAGAAACTGACTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGGCATCTCCAGCATGAATTTGGAAGTGAGGCCATGGGACCCATTTTTGGGGAGAGGTCCAAAACTTTaGCCCTCAGAGCTTTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: AGISSMNLEVRPWDPFLGRGPKL*PSELWE Trigger: CTCCCAAAGCTCTGAGGGCCAAAGTTTTGGACCTCT...CCCCAAAAATGGGTCCCATGGCCTCACTTCCAAATTCATGCTGGAGATGCCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR CAA 90 bp | CTGAGCCATCTTGCTGGCCCTGCAAAATCAATCTTGATACAGGCCTaGGGATGTAAGCCAGGACTGCCATTCGTTTCAGCTGTGAACATG | + |
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Preference number: 2 (lower is better) Translates to: LSHLAGPAKSILIQA*GCKPGLPFVSAVNM Trigger: CATGTTCACAGCTGAAACGAATGGCAGTCCTGGCTTACATCCCAAGGCCTGTATCAAGATTGATTTTGCAGGGCCAGCAAGATGGCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR CAA 90 bp | AGCCCTTTTCTGCTGAGCCATCTTGCTGGCCCTGCAAAATCAATCTaGATACAGGCCTTGGGATGTAAGCCAGGACTGCCATTCGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: SPFLLSHLAGPAKSI*IQALGCKPGLPFVS Trigger: TGAAACGAATGGCAGTCCTGGCTTACATCCCAAGGCCTGTATCAAGATTGATTTTGCAGGGCCAGCAAGATGGCTCAGCAGAAAAGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGTGATTTCACAGAGCCTGAGGCAGGCTGAGACGGGAAGCTTCCCTTCACTGCAGACAAAGTGCACCTaGACAGTAAATACTGCACAA | + |
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Preference number: 2 (lower is better) Translates to: SVISQSLRQAETGSFPSLQTKCT*TVNTAQ Trigger: TTGTGCAGTATTTACTGTGCAGGTGCACTTTGTCTG...CAGTGAAGGGAAGCTTCCCGTCTCAGCCTGCCTCAGGCTCTGTGAAATCACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR-3UTR GCA 90 bp | TACAGGTGCATGCTAAAGCCAGAGATATCTGACCCCTTAGTGCTGGCATTTGCAGGTCAGAGGACAACCTaGCAGTCAGTTTCTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: YRCMLKPEISDPLVLAFAGQRTT*QSVSPS Trigger: GGAAGGAGAAACTGACTGGCAGGTTGTCCTCTGACC...TGCAAATGCCAGCACTAAGGGGTCAGATATCTCTGGCTTTAGCATGCACCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
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| 3UTR-3UTR GCA 90 bp | CAATCCATCAAGGGGCCGCCTCAAAAATGTGGGAAAGGCCAGTTTGTTCTTTCCGTGATGCTCTCAGACTaGAGACATCTCCCACTAAGG | + |
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Preference number: 2 (lower is better) Translates to: QSIKGPPQKCGKGQFVLSVMLSD*RHLPLR Trigger: CCTTAGTGGGAGATGTCTGCAGTCTGAGAGCATCAC...GGAAAGAACAAACTGGCCTTTCCCACATTTTTGAGGCGGCCCCTTGATGGATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGATTTCACAGAGCCTGAGGCAGGCTGAGACGGGAAGCTTCCCTTCACTGAAGTGTGACCAGAGGTaGCTGGATCCAGATTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: SVISQSLRQAETGSFPSLKCDQR*LDPDLK Trigger: TTTTAAATCTGGATCCAGCCACCTCTGGTCACACTT...CAGTGAAGGGAAGCTTCCCGTCTCAGCCTGCCTCAGGCTCTGTGAAATCACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTTTGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCATGCGCGTCACAGTACAACGTTaGGGAGTTGGTTCTCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: AFALSSDITHVLWHACMRVTVQR*GVGSLL Trigger: AAGGAGAGAACCAACTCCTCAACGTTGTACTGTGAC...GCGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTTGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCATGCGCAATCATCCTCCAACCGTaGCAGACACACCTTAGCATG | + |
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Preference number: 2 (lower is better) Translates to: LLHCPLTSHMFCGMHACAIILQP*QTHLSM Trigger: CATGCTAAGGTGTGTCTGTCACGGTTGGAGGATGAT...TGCGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTTGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCATGCGCACTTCGAGCTAGATCCTaGACTAGTTCCATGTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LLHCPLTSHMFCGMHACALRARS*TSSMCW Trigger: CCAGCACATGGAACTAGTTCAGGATCTAGCTCGAAG...TGCGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
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| 3UTR-3UTR GCA 90 bp | CAACTCTTACTTTCCCACTTAATTTTGGACCATTTTGAACCAGCAGAGGTGGGAGCCACCGCATCAGAATaGCTTGTGCACAGCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: QLLLSHLILDHFEPAEVGATASE*LVHSRQ Trigger: CTGCCTGCTGTGCACAAGGCATTCTGATGCGGTGGC...TCCCACCTCTGCTGGTTCAAAATGGTCCAAAATTAAGTGGGAAAGTAAGAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTTTGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCATGCGCACCCTGGAATCTACCTaGTGGAAGAAAGCCAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: AFALSSDITHVLWHACMRTLEST*WKKASF Trigger: AAAGCTGGCTTTCTTCCACCAGGTAGATTCCAGGGT...GCGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTTTGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCATGCGCCCTGAGTTTGAACCCTaGAATCTACCTGGTGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: AFALSSDITHVLWHACMRPEFEP*NLPGGR Trigger: TCTTCCACCAGGTAGATTCCAGGGTTCAAACTCAGG...GCGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR CAA 90 bp | CTGAGTTTGAACCCTGGAATCTACCTGGTGGAAGAAAGCCAGCTTTaGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCA | + |
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Preference number: 2 (lower is better) Translates to: LSLNPGIYLVEESQL*HCPLTSHMFCGMHA Trigger: TGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAGCTGGCTTTCTTCCACCAGGTAGATTCCAGGGTTCAAACTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR CAA 90 bp | TGTACAATCTCCTCTGGGCTGTCTGTTATTCGAACAGTGGCGAGTTaGTCAGGGTCCGATTTTGACATCTTGGAAGAAGGGTCTCGAAGA | + |
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Preference number: 2 (lower is better) Translates to: CTISSGLSVIRTVAS*SGSDFDILEEGSRR Trigger: TCTTCGAGACCCTTCTTCCAAGATGTCAAAATCGGACCCTGACAAACTCGCCACTGTTCGAATAACAGACAGCCCAGAGGAGATTGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTTTGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCATGCGCGGAACGTTGCTCAATTaGCAGCAGTCATCAAATGCA | + |
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Preference number: 2 (lower is better) Translates to: AFALSSDITHVLWHACMRGTLLN*QQSSNA Trigger: TGCATTTGATGACTGCTGTCAATTGAGCAACGTTCC...GCGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| 3UTR-3UTR TCA 90 bp | TACAGGTGCATGCTAAAGCCAGAGATATCTGACCCCTTAGTGCTGGCATTTGCAGTCACAGTACAACGTTaGGGAGTTGGTTCTCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: YRCMLKPEISDPLVLAFAVTVQR*GVGSLL Trigger: AAGGAGAGAACCAACTCCTCAACGTTGTACTGTGAC...TGCAAATGCCAGCACTAAGGGGTCAGATATCTCTGGCTTTAGCATGCACCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
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| 3UTR-3UTR GCA 90 bp | TTTCCCGAACCTAGTTGGTGTTTTAATCTGGACTCTGGGATACAGTGTCTCCTATGGAAGAGCTGTGCCTaGCTCAGGGATTGGAACGTT | + |
|
Preference number: 2 (lower is better) Translates to: FPEPSWCFNLDSGIQCLLWKSCA*LRDWNV Trigger: AACGTTCCAATCCCTGAGGCAGGCACAGCTCTTCCA...TAGGAGACACTGTATCCCAGAGTCCAGATTAAAACACCAACTAGGTTCGGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAGGCATCTCCAGCATGAATTTGGAAGTGAGGCCATGGGACCCATTTTTGGGGACAACACAGACAAAGTaGACCTGCACAGTAAATACT | + |
|
Preference number: 2 (lower is better) Translates to: AGISSMNLEVRPWDPFLGTTQTK*TCTVNT Trigger: AGTATTTACTGTGCAGGTGCACTTTGTCTGTGTTGT...CCCCAAAAATGGGTCCCATGGCCTCACTTCCAAATTCATGCTGGAGATGCCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR GCA 90 bp | TACAGGTGCATGCTAAAGCCAGAGATATCTGACCCCTTAGTGCTGGCATTTGCAGTGTGGGTAGTCCTGTaGATTTCATTGTGGTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: YRCMLKPEISDPLVLAFAVWVVL*ISLWCV Trigger: CACACACCACAATGAAATGCACAGGACTACCCACAC...TGCAAATGCCAGCACTAAGGGGTCAGATATCTCTGGCTTTAGCATGCACCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| 3UTR-3UTR CCA 90 bp | AGTCTGTCACAGCCTTGCGGAATTTCTGTACAATCTCCTCTGGGCTGTCTGTTATGTGTGTCATTGAACTaGAGTGGAAGAGCTGTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SLSQPCGISVQSPLGCLLCVSLN*SGRAVP Trigger: AGGCACAGCTCTTCCACTCCAGTTCAATGACACACA...TAACAGACAGCCCAGAGGAGATTGTACAGAAATTCCGCAAGGCTGTGACAGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTAGTCCTGTGCATTTCATTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGAGCCATCTTGCTaGCCCTGCAAAATCAATCTT | + |
|
Preference number: 2 (lower is better) Translates to: GSPVHFIVVCVCVCVCVCAEPSC*PCKINL Trigger: AAGATTGATTTTGCAGGGCCAGCAAGATGGCTCAGC...ACACACACACACACACACACACACACACACCACAATGAAATGCACAGGACTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR CAA 90 bp | CCCACCAACTTCTTCACCTCCTCGAACACAGGAGAGGCCAATTCTTaGGCTTTTGCAGATCCAACAAGTAAAACCTTTCTTAAGTGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: PTNFFTSSNTGEANS*AFADPTSKTFLKWS Trigger: GGACCACTTAAGAAAGGTTTTACTTGTTGGATCTGCAAAAGCCAAAGAATTGGCCTCTCCTGTGTTCGAGGAGGTGAAGAAGTTGGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTCCCGAACCTAGTTGGTGTTTTAATCTGGACTCTGGGATACAGTGTCTCCTAATCATCCTCCAACCGTaGCAGACACACCTTAGCATG | + |
|
Preference number: 2 (lower is better) Translates to: FPEPSWCFNLDSGIQCLLIILQP*QTHLSM Trigger: CATGCTAAGGTGTGTCTGTCACGGTTGGAGGATGAT...TAGGAGACACTGTATCCCAGAGTCCAGATTAAAACACCAACTAGGTTCGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR TCA 90 bp | CAATCCATCAAGGGGCCGCCTCAAAAATGTGGGAAAGGCCAGTTTGTTCTTTCCTTTTGCACTGTCCTCTaGCATCACACATGTTTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: QSIKGPPQKCGKGQFVLSFCTVL*HHTCFV Trigger: CACAAAACATGTGTGATGTCAGAGGACAGTGCAAAA...GGAAAGAACAAACTGGCCTTTCCCACATTTTTGAGGCGGCCCCTTGATGGATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| 3UTR-3UTR GCA 90 bp | TTTCCCGAACCTAGTTGGTGTTTTAATCTGGACTCTGGGATACAGTGTCTCCTACACTGGATTCAGGATTaGAGCATAGGACCTGTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: FPEPSWCFNLDSGIQCLLHWIQD*SIGPVC Trigger: GCAGACAGGTCCTATGCTGCAATCCTGAATCCAGTG...TAGGAGACACTGTATCCCAGAGTCCAGATTAAAACACCAACTAGGTTCGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCCTCAGAGCTTTGGGAGAAGTCTTAAAAAGCACCAGTCTTGGAAGCAGGGGACCTCTCTTTATGAACTaGAAATACCCACTGGATTCA | + |
|
Preference number: 2 (lower is better) Translates to: ALRALGEVLKSTSLGSRGPLFMN*KYPLDS Trigger: TGAATCCAGTGGGTATTTGCAGTTCATAAAGAGAGG...TCCCCTGCTTCCAAGACTGGTGCTTTTTAAGACTTCTCCCAAAGCTCTGAGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTTGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCATGCGCACTGCAAATACCCACTaGATTCAGGATTGCAGCATA | + |
|
Preference number: 2 (lower is better) Translates to: AFALSSDITHVLWHACMRTANTH*IQDCSI Trigger: TATGCTGCAATCCTGAATCCAGTGGGTATTTGCAGT...GCGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCCGAACCTAGTTGGTGTTTTAATCTGGACTCTGGGATACAGTGTCTCCTAAGAGGTCCAAAACTTTaGCCCTCAGAGCTTTGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: FPEPSWCFNLDSGIQCLLRGPKL*PSELWE Trigger: CTCCCAAAGCTCTGAGGGCCAAAGTTTTGGACCTCT...TAGGAGACACTGTATCCCAGAGTCCAGATTAAAACACCAACTAGGTTCGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTTTGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCATGCGCACTGTACAATCTCCTCTaGGCTGTCTGTTATTCGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LLHCPLTSHMFCGMHACALYNLL*AVCYSN Trigger: GTTCGAATAACAGACAGCCCAGAGGAGATTGTACAG...TGCGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR CAA 90 bp | GGCTGTCTGTTATTCGAACAGTGGCGAGTTTGTCAGGGTCCGATTTaGACATCTTGGAAGAAGGGTCTCGAAGAGATTTCACTTTCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: GCLLFEQWRVCQGPI*TSWKKGLEEISLSS Trigger: TGAAGAAAGTGAAATCTCTTCGAGACCCTTCTTCCAAGATGTCAAAATCGGACCCTGACAAACTCGCCACTGTTCGAATAACAGACAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTAGTCCTGTGCATTTCATTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGCAAAATCAATCTTaGTACAGGCCTTGGGATGTA | + |
|
Preference number: 2 (lower is better) Translates to: GSPVHFIVVCVCVCVCVCLQNQS*YRPWDV Trigger: TACATCCCAAGGCCTGTATCAAGATTGATTTTGCAG...ACACACACACACACACACACACACACACACCACAATGAAATGCACAGGACTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTGCTTCTTATTTACTTAGTGACACTGTACAGCTAATTCCATGTTCTACCCCTCTCGTAGGTGACCTCTaGCGTGAAGTCTGTCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: LASYLLSDTVQLIPCSTPLVGDL*REVCHS Trigger: GCTGTGACAGACTTCACGTCAGAGGTCACCTACGAG...AGGGGTAGAACATGGAATTAGCTGTACAGTGTCACTAAGTAAATAAGAAGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTAAGTCACAGTACAACGTTGAGGAGTTGGTTCTCTCCTTTATTTATCACAGGAGTGGAAGAGCTGTaGCTGCCTCAGGGATTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: CVSHSTTLRSWFSPLFITGVEEL*LPQGLE Trigger: TTCCAATCCCTGAGGCAGGCACAGCTCTTCCACTCC...TGTGATAAATAAAGGAGAGAACCAACTCCTCAACGTTGTACTGTGACTTACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTTTTGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCATGCGCCCTCTCTTTATGAACTaGAAATACCCACTGGATTCA | + |
|
Preference number: 2 (lower is better) Translates to: AFALSSDITHVLWHACMRPLFMN*KYPLDS Trigger: TGAATCCAGTGGGTATTTGCAGTTCATAAAGAGAGG...GCGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTAGTCCTGTGCATTTCATTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCATCTTGCTGGCCCTaGAAAATCAATCTTGATACA | + |
|
Preference number: 2 (lower is better) Translates to: GSPVHFIVVCVCVCVCVCPSCWP*KINLDT Trigger: TGTATCAAGATTGATTTTGCAGGGCCAGCAAGATGG...ACACACACACACACACACACACACACACACCACAATGAAATGCACAGGACTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGTACCTTGAGCCCGAGCCACCTTGCTAGCACAAGTCAAGTCATTCCAATAAATCTCCTTCCTGATTaGAGCAAATTTCTCAATCAC | + |
|
Preference number: 2 (lower is better) Translates to: AGTLSPSHLASTSQVIPINLLPD*SKFLNH Trigger: GTGATTGAGAAATTTGCTCCAATCAGGAAGGAGATT...TATTGGAATGACTTGACTTGTGCTAGCAAGGTGGCTCGGGCTCAAGGTACCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR CAA 90 bp | GTTATTCGAACAGTGGCGAGTTTGTCAGGGTCCGATTTTGACATCTaGGAAGAAGGGTCTCGAAGAGATTTCACTTTCTTCATGGATGTG | + |
|
Preference number: 2 (lower is better) Translates to: VIRTVASLSGSDFDI*EEGSRRDFTFFMDV Trigger: CACATCCATGAAGAAAGTGAAATCTCTTCGAGACCCTTCTTCCAAGATGTCAAAATCGGACCCTGACAAACTCGCCACTGTTCGAATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTTTGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCATGCGCACATCATCACATGAGCTaGAAGAATGAACCTCTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LLHCPLTSHMFCGMHACAHHHMS*KNEPLF Trigger: AAAGAGAGGTTCATTCTTGCAGCTCATGTGATGATG...TGCGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR CAA 90 bp | GGGTCTCGAAGAGATTTCACTTTCTTCATGGATGTGAGAATGGACTaGGGCAATGGAAAGAACTCCCCATACTTTTGGTTGAAACTTCGA | + |
|
Preference number: 2 (lower is better) Translates to: GSRRDFTFFMDVRMD*GNGKNSPYFWLKLR Trigger: TCGAAGTTTCAACCAAAAGTATGGGGAGTTCTTTCCATTGCCCAAGTCCATTCTCACATCCATGAAGAAAGTGAAATCTCTTCGAGACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR CAA 90 bp | ACTTCTTCACCTCCTCGAACACAGGAGAGGCCAATTCTTTGGCTTTaGCAGATCCAACAAGTAAAACCTTTCTTAAGTGGTCCTTATCCA | + |
|
Preference number: 2 (lower is better) Translates to: TSSPPRTQERPILWL*QIQQVKPFLSGPYP Trigger: TGGATAAGGACCACTTAAGAAAGGTTTTACTTGTTGGATCTGCAAAAGCCAAAGAATTGGCCTCTCCTGTGTTCGAGGAGGTGAAGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCCGAACCTAGTTGGTGTTTTAATCTGGACTCTGGGATACAGTGTCTCCTAACTGCAAATACCCACTaGATTCAGGATTGCAGCATA | + |
|
Preference number: 2 (lower is better) Translates to: FPEPSWCFNLDSGIQCLLTANTH*IQDCSI Trigger: TATGCTGCAATCCTGAATCCAGTGGGTATTTGCAGT...TAGGAGACACTGTATCCCAGAGTCCAGATTAAAACACCAACTAGGTTCGGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR CCA 90 bp | TACAGGTGCATGCTAAAGCCAGAGATATCTGACCCCTTAGTGCTGGCATTTGCACCTTTATTTATCACATaGATCTCAGGGATTGAACTC | + |
|
Preference number: 2 (lower is better) Translates to: YRCMLKPEISDPLVLAFAPLFIT*ISGIEL Trigger: GAGTTCAATCCCTGAGATCCATGTGATAAATAAAGG...TGCAAATGCCAGCACTAAGGGGTCAGATATCTCTGGCTTTAGCATGCACCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTAAGTCACAGTACAACGTTGAGGAGTTGGTTCTCTCCTTTATTTATCACATCTGCTGAGCCATCTTaGTGGCCCTGCAAAATCAAT | + |
|
Preference number: 2 (lower is better) Translates to: CVSHSTTLRSWFSPLFITSAEPS*WPCKIN Trigger: ATTGATTTTGCAGGGCCAGCAAGATGGCTCAGCAGA...TGTGATAAATAAAGGAGAGAACCAACTCCTCAACGTTGTACTGTGACTTACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTGTAAGTCACAGTACAACGTTGAGGAGTTGGTTCTCTCCTTTATTTATCACAATGAACCTCTCTTTATaGACTGCAAATACCCACTGG | + |
|
Preference number: 2 (lower is better) Translates to: CVSHSTTLRSWFSPLFITMNLSL*TANTHW Trigger: CCAGTGGGTATTTGCAGTTCATAAAGAGAGGTTCAT...TGTGATAAATAAAGGAGAGAACCAACTCCTCAACGTTGTACTGTGACTTACACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTGTAAGTCACAGTACAACGTTGAGGAGTTGGTTCTCTCCTTTATTTATCACACATGAGCTGCAAGAATaGACCTCTCTTTATGAACTG | + |
|
Preference number: 2 (lower is better) Translates to: CVSHSTTLRSWFSPLFITHELQE*TSLYEL Trigger: CAGTTCATAAAGAGAGGTTCATTCTTGCAGCTCATG...TGTGATAAATAAAGGAGAGAACCAACTCCTCAACGTTGTACTGTGACTTACACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTAAGTCACAGTACAACGTTGAGGAGTTGGTTCTCTCCTTTATTTATCACACTAGGCCTTCACTCTTaGACTTGCTTCTTATTTACT | + |
|
Preference number: 2 (lower is better) Translates to: CVSHSTTLRSWFSPLFITLGLHS*TCFLFT Trigger: AGTAAATAAGAAGCAAGTCCAAGAGTGAAGGCCTAG...TGTGATAAATAAAGGAGAGAACCAACTCCTCAACGTTGTACTGTGACTTACACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR CCA 72 bp | ACCACCTCCTCCACCGAGAGGCCCGACACGGCCGCGTaGATCGCCACCATGTTGGAAACACCAGCTCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TTSSTERPDTAA*IATMLETPALL Trigger: CAGCAGAGCTGGTGTTTCCAACATGGTGGCGATCCACGCGGCCGTGTCGGGCCTCTCGGTGGAGGAGGTGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR TCA 72 bp | GATAAAGCTTTGCGTGTGGCTGAGTTCTCGTGTGGCTaGGTTCTCAGGCTCCTTCAGGTCCGAGGCACCGGG | + |
|
Preference number: 3 (lower is better) Translates to: DKALRVAEFSCG*VLRLLQVRGTG Trigger: CCCGGTGCCTCGGACCTGAAGGAGCCTGAGAACTCAGCCACACGAGAACTCAGCCACACGCAAAGCTTTATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACCGCATCAGAATGCCTTGTGCACAGCAGGCAGCTCTGCTGTCCCACCGCTTAGAAAGGAATCCTCTTaGTTCCAGGGGAGCAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: PPHQNALCTAGSSAVPPLRKESS*FQGSSN Trigger: GTTGCTGCTCCCCTGGAACAAAGAGGATTCCTTTCT...AAGCGGTGGGACAGCAGAGCTGCCTGCTGTGCACAAGGCATTCTGATGCGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTTGTGCACAGCAGGCAGCTCTGCTGTCCCACCGCTTGTCTCGCAGGAGTGCAGGAGAGTCCTCTAGATaGAGACACAGACAGAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PCAQQAALLSHRLSRRSAGESSR*RHRQKG Trigger: TCCTTTCTGTCTGTGTCTCAATCTAGAGGACTCTCC...TGCACTCCTGCGAGACAAGCGGTGGGACAGCAGAGCTGCCTGCTGTGCACAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| 3UTR CCA 72 bp | TGTGCTGGACTTGATCCTCCCCGACAGGAACGTGTGTaGACCTGTGATTCCAGCACTCAGGAGCCTGAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: CAGLDPPRQERV*TCDSSTQEPED Trigger: ATCCTCAGGCTCCTGAGTGCTGGAATCACAGGTCCACACACGTTCCTGTCGGGGAGGATCAAGTCCAGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTGATTTCACAGAGCCTGAGGCAGGCTGAGACGGGAAGCTTCCCTTCACTGTTCCATGTGCTGGACTaGATCCTCCCCGACAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SVISQSLRQAETGSFPSLFHVLD*ILPDRN Trigger: GTTCCTGTCGGGGAGGATCAAGTCCAGCACATGGAA...CAGTGAAGGGAAGCTTCCCGTCTCAGCCTGCCTCAGGCTCTGTGAAATCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR TCA 72 bp | AACACCAGCTCTGCTGTCCGGCTCGTAGGTGACCTCTaGCGTGAAGTCTGTCACAGCCTTGCGGAATTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: NTSSAVRLVGDL*REVCHSLAEFL Trigger: CAGAAATTCCGCAAGGCTGTGACAGACTTCACGTCAGAGGTCACCTACGAGCCGGACAGCAGAGCTGGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR TCA 72 bp | TTGAGCTCCAGCTATTCAGCTTGGCAGCAGGTACCTTaGGCCCGAGCCACCTTGCTAGCACAAGTCAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LSSSYSAWQQVP*ARATLLAQVKS Trigger: TGACTTGACTTGTGCTAGCAAGGTGGCTCGGGCTCAAGGTACCTGCTGCCAAGCTGAATAGCTGGAGCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR TCA 72 bp | GTCAGTTTCTCCTTCCACCATGCTGGCCCTGTGGATTaGGCTCCAGCTATTCAGCTTGGCAGCAGGTACCTT | + |
|
Preference number: 3 (lower is better) Translates to: VSFSFHHAGPVD*APAIQLGSRYL Trigger: AAGGTACCTGCTGCCAAGCTGAATAGCTGGAGCTCAATCCACAGGGCCAGCATGGTGGAAGGAGAAACTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR GCA 72 bp | AGAGGACAACCTGCCAGTCAGTTTCTCCTTCCACCATaGTGGCCCTGTGGATTGAGCTCCAGCTATTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RGQPASQFLLPP*WPCGLSSSYSA Trigger: AGCTGAATAGCTGGAGCTCAATCCACAGGGCCAGCATGGTGGAAGGAGAAACTGACTGGCAGGTTGTCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR TCA 72 bp | GCTATACTCTGTGATTTCACAGAGCCTGAGGCAGGCTaGGACGGGAAGCTTCCCTTCACTGGAAACGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: AILCDFTEPEAG*DGKLPFTGNVR Trigger: TCTGACGTTTCCAGTGAAGGGAAGCTTCCCGTCTCAGCCTGCCTCAGGCTCTGTGAAATCACAGAGTATAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTTGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCATGCGCCCACTGGATTCAGGATaGCAGCATAGGACCTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AFALSSDITHVLWHACMRPLDSG*QHRTCL Trigger: CAGACAGGTCCTATGCTGCAATCCTGAATCCAGTGG...GCGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR TCA 72 bp | CAGGAGAAAGCCCAGGGGCAGAGATTTCCAGCTCCTTaGCTCATTAGGAGAGTTTCCGTGGATCAAGCATGT | + |
|
Preference number: 3 (lower is better) Translates to: QEKAQGQRFPAP*LIRRVSVDQAC Trigger: ACATGCTTGATCCACGGAAACTCTCCTAATGAGTCAAGGAGCTGGAAATCTCTGCCCCTGGGCTTTCTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| 3UTR CCA 72 bp | GAACTGGAGTGGAAGAGCTGTGCCTGCCTCAGGGATTaGAACGTTGCTCAATTGACAGCAGTCATCAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: ELEWKSCACLRD*NVAQLTAVIKC Trigger: GCATTTGATGACTGCTGTCAATTGAGCAACGTTCCAATCCCTGAGGCAGGCACAGCTCTTCCACTCCAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGTACCTTGAGCCCGAGCCACCTTGCTAGCACAAGTCAAGTCATTCCAATATTGGCCCTCAGAGCTTaGGGAGAAGTCTTAAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: AGTLSPSHLASTSQVIPILALRA*GEVLKS Trigger: GCTTTTTAAGACTTCTCCCAAAGCTCTGAGGGCCAA...TATTGGAATGACTTGACTTGTGCTAGCAAGGTGGCTCGGGCTCAAGGTACCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR CAA 90 bp | CAATCCATCAAGGGGCCGCCTCAAAAATGTGGGAAAGGCCAGTTTGTTCTTTCCATCTCCAGCATGAATTaGGAAGTGAGGCCATGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: QSIKGPPQKCGKGQFVLSISSMN*EVRPWD Trigger: GTCCCATGGCCTCACTTCCAAATTCATGCTGGAGAT...GGAAAGAACAAACTGGCCTTTCCCACATTTTTGAGGCGGCCCCTTGATGGATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTTGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCATGCGCATCTCCAGCATGAATTaGGAAGTGAGGCCATGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: AFALSSDITHVLWHACMRISSMN*EVRPWD Trigger: GTCCCATGGCCTCACTTCCAAATTCATGCTGGAGAT...GCGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR TCA 72 bp | ACCTGGTGGAAGAAAGCCAGCTTTTGCACTGTCCTCTaGCATCACACATGTTTTGTGGCATGCATGCATGCG | + |
|
Preference number: 3 (lower is better) Translates to: TWWKKASFCTVL*HHTCFVACMHA Trigger: CGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAGCTGGCTTTCTTCCACCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR CCA 72 bp | CACTTAAGAAGAGCTCTAACTTCGAGTTTTCTTTCTTaGCCTGAGTTCCTGGGCAGGGCCAACATACTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: HLRRALTSSFLS*PEFLGRANILA Trigger: GGCCAGTATGTTGGCCCTGCCCAGGAACTCAGGCCAAGAAAGAAAACTCGAAGTTAGAGCTCTTCTTAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGTACCTTGAGCCCGAGCCACCTTGCTAGCACAAGTCAAGTCATTCCAATATGGAACGTTGCTCAATaGACAGCAGTCATCAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: AGTLSPSHLASTSQVIPIWNVAQ*TAVIKC Trigger: GCATTTGATGACTGCTGTCAATTGAGCAACGTTCCA...TATTGGAATGACTTGACTTGTGCTAGCAAGGTGGCTCGGGCTCAAGGTACCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGAGAGTCCTCTAGATTGAGACACAGACAGAAAGGAATCCTCTTTGTTCCAGGGAGCAGCAACTGCTaGGGGAGTGAAGGGGAATTA | + |
|
Preference number: 3 (lower is better) Translates to: SGESSRLRHRQKGILFVPGSSNC*GSEGEL Trigger: TAATTCCCCTTCACTCCCCAAGCAGTTGCTGCTCCC...TGGAACAAAGAGGATTCCTTTCTGTCTGTGTCTCAATCTAGAGGACTCTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| 3UTR GCA 72 bp | ATAGGACCTGTCTGCACAACACAGACAAAGTGCACCTaGACAGTAAATACTGCACAAGCAAGCACACGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: IGPVCTTQTKCT*TVNTAQASTRH Trigger: ATGGCGTGTGCTTGCTTGTGCAGTATTTACTGTGCAGGTGCACTTTGTCTGTGTTGTGCAGACAGGTCCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR CCA 72 bp | GTACAATCTCCTCTGGGCTGTCTGTTATTCGAACAGTaGCGAGTTTGTCAGGGTCCGATTTTGACATCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: VQSPLGCLLFEQ*RVCQGPILTSW Trigger: CCAAGATGTCAAAATCGGACCCTGACAAACTCGCCACTGTTCGAATAACAGACAGCCCAGAGGAGATTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR CCA 72 bp | TGTCACAGCCTTGCGGAATTTCTGTACAATCTCCTCTaGGCTGTCTGTTATTCGAACAGTGGCGAGTTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: CHSLAEFLYNLL*AVCYSNSGEFV Trigger: GACAAACTCGCCACTGTTCGAATAACAGACAGCCCAGAGGAGATTGTACAGAAATTCCGCAAGGCTGTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTTGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCATGCGCCCCATTTTTGGGGTTTaGAAAGGTAAGTGTGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: AFALSSDITHVLWHACMRPIFGV*KGKCDQ Trigger: CTGGTCACACTTACCTTTCAAAACCCCAAAAATGGG...GCGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAGGTGCATGCTAAAGCCAGAGATATCTGACCCCTTAGTGCTGGCATTTGCAGTCCTGTGCATTTCATaGTGGTGTGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: YRCMLKPEISDPLVLAFAVLCIS*WCVCVC Trigger: ACACACACACACACACCACAATGAAATGCACAGGAC...TGCAAATGCCAGCACTAAGGGGTCAGATATCTCTGGCTTTAGCATGCACCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| 3UTR-3UTR CAA 90 bp | CTTTTGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCATGCGCAGATGTGAGAATGGACTaGGGCAATGGAAAGAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: LLHCPLTSHMFCGMHACADVRMD*GNGKNS Trigger: GGAGTTCTTTCCATTGCCCAAGTCCATTCTCACATC...TGCGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCCTCAGAGCTTTGGGAGAAGTCTTAAAAAGCACCAGTCTTGGAAGCAGGGGACCTTCACTCTTGGACTaGCTTCTTATTTACTTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ALRALGEVLKSTSLGSRGPSLLD*LLIYLV Trigger: CACTAAGTAAATAAGAAGCAAGTCCAAGAGTGAAGG...TCCCCTGCTTCCAAGACTGGTGCTTTTTAAGACTTCTCCCAAAGCTCTGAGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR TCA 72 bp | ATGACCACTGGAAGAGCAGCTAATGCTCTTAACCCCTaGGCCATCTCTTCAGCCCACTCTCTTTTGTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: MTTGRAANALNP*AISSAHSLLFL Trigger: TAGAAACAAAAGAGAGTGGGCTGAAGAGATGGCTCAGGGGTTAAGAGCATTAGCTGCTCTTCCAGTGGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| 3UTR TCA 72 bp | CCAGAAGAGGGCATCAGATTCCATTACAGATGGTTGTaGGCCACCATGTGGTTGCTAGGAATTGAACTCATG | + |
|
Preference number: 3 (lower is better) Translates to: PEEGIRFHYRWL*ATMWLLGIELM Trigger: CATGAGTTCAATTCCTAGCAACCACATGGTGGCTCACAACCATCTGTAATGGAATCTGATGCCCTCTTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| 3UTR TCA 72 bp | CCAACTCTTACTTTCCCACTTAATTTTGGACCATTTTaGACCAGCAGAGGTGGGACAGGCTCACACCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PTLTFPLNFGPF*TSRGGTGSHPL Trigger: CAAAGGGTGTGAGCCTGTCCCACCTCTGCTGGTTCAAAATGGTCCAAAATTAAGTGGGAAAGTAAGAGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| 3UTR GCA 72 bp | CACAACACAGACAAAGTGCACCTGCACAGTAAATACTaGACAAGCAAGCACACGCCATGGCTCAGTAATTGT | + |
|
Preference number: 3 (lower is better) Translates to: HNTDKVHLHSKY*TSKHTPWLSNC Trigger: ACAATTACTGAGCCATGGCGTGTGCTTGCTTGTGCAGTATTTACTGTGCAGGTGCACTTTGTCTGTGTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAGGTGCATGCTAAAGCCAGAGATATCTGACCCCTTAGTGCTGGCATTTGCATCAGCCCACTCTCTTTaGTTTCTATGTGTCCTATTG | + |
|
Preference number: 3 (lower is better) Translates to: YRCMLKPEISDPLVLAFASAHSL*FLCVLL Trigger: CAATAGGACACATAGAAACAAAAGAGAGTGGGCTGA...TGCAAATGCCAGCACTAAGGGGTCAGATATCTCTGGCTTTAGCATGCACCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| 3UTR TCA 72 bp | TCCCTGTCCAGTCTCTTGGCTCTGAATTCCTTGAACTaGCTATGCACCACTGACAAGTTAGCCTTTAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SLSSLLALNSLN*LCTTDKLAFKS Trigger: AGACTTAAAGGCTAACTTGTCAGTGGTGCATAGTCAGTTCAAGGAATTCAGAGCCAAGAGACTGGACAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| 3UTR TCA 72 bp | TATTCGAACAGTGGCGAGTTTGTCAGGGTCCGATTTTaGCATCTTGGAAGAAGGGTCTCGAAGAGATTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: YSNSGEFVRVRF*HLGRRVSKRFH Trigger: GTGAAATCTCTTCGAGACCCTTCTTCCAAGATGTCAAAATCGGACCCTGACAAACTCGCCACTGTTCGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR CCA 72 bp | CTGCACAGTAAATACTGCACAAGCAAGCACACGCCATaGCTCAGTAATTGTTCACGTTTTCGGGAATACTTC | + |
|
Preference number: 3 (lower is better) Translates to: LHSKYCTSKHTP*LSNCSRFREYF Trigger: GAAGTATTCCCGAAAACGTGAACAATTACTGAGCCATGGCGTGTGCTTGCTTGTGCAGTATTTACTGTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR CCA 72 bp | CAGTGGCGAGTTTGTCAGGGTCCGATTTTGACATCTTaGAAGAAGGGTCTCGAAGAGATTTCACTTTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: QWRVCQGPILTS*KKGLEEISLSS Trigger: TGAAGAAAGTGAAATCTCTTCGAGACCCTTCTTCCAAGATGTCAAAATCGGACCCTGACAAACTCGCCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR GCA 72 bp | CACATGAGCTGCAAGAATGAACCTCTCTTTATGAACTaGAAATACCCACTGGATTCAGGATTGCAGCATAGG | + |
|
Preference number: 3 (lower is better) Translates to: HMSCKNEPLFMN*KYPLDSGLQHR Trigger: CCTATGCTGCAATCCTGAATCCAGTGGGTATTTGCAGTTCATAAAGAGAGGTTCATTCTTGCAGCTCATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR CCA 72 bp | TGTACCCTTTTCCCGAACCTAGTTGGTGTTTTAATCTaGACTCTGGGATACAGTGTCTCCTACTTCCAATTC | + |
|
Preference number: 3 (lower is better) Translates to: CTLFPNLVGVLI*TLGYSVSYFQF Trigger: GAATTGGAAGTAGGAGACACTGTATCCCAGAGTCCAGATTAAAACACCAACTAGGTTCGGGAAAAGGGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAGGTGCATGCTAAAGCCAGAGATATCTGACCCCTTAGTGCTGGCATTTGCAGATCATCACACTCAATaGAATTTGGACAGGCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: YRCMLKPEISDPLVLAFADHHTQ*NLDRLK Trigger: TTTTAGCCTGTCCAAATTCAATTGAGTGTGATGATC...TGCAAATGCCAGCACTAAGGGGTCAGATATCTCTGGCTTTAGCATGCACCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTGTCACAGCCTTGCGGAATTTCTGTACAATCTCCTCTGGGCTGTCTGTTAGATCATCACACTCAATaGAATTTGGACAGGCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLSQPCGISVQSPLGCLLDHHTQ*NLDRLK Trigger: TTTTAGCCTGTCCAAATTCAATTGAGTGTGATGATC...TAACAGACAGCCCAGAGGAGATTGTACAGAAATTCCGCAAGGCTGTGACAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR TCA 72 bp | AAATGTGGGAAAGGCCAGTTTGTTCTTTCCTTGAGCTaGCCCATCTTGGAATGTCATAGTTTATGGTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: KCGKGQFVLSLS*PILECHSLWFP Trigger: TGGGAACCATAAACTATGACATTCCAAGATGGGTCAGCTCAAGGAAAGAACAAACTGGCCTTTCCCACATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| 3UTR TCA 72 bp | ACTTGGGCAATGGAAAGAACTCCCCATACTTTTGGTTaGAACTTCGAGCTAGATCCTGAACTAGTTCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: TWAMERTPHTFG*NFELDPELVPC Trigger: ACATGGAACTAGTTCAGGATCTAGCTCGAAGTTTCAACCAAAAGTATGGGGAGTTCTTTCCATTGCCCAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR CCA 72 bp | TGTGTGTGTGTAAGTCACAGTACAACGTTGAGGAGTTaGTTCTCTCCTTTATTTATCACATGGATCTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: CVCVSHSTTLRS*FSPLFITWISG Trigger: CCCTGAGATCCATGTGATAAATAAAGGAGAGAACCAACTCCTCAACGTTGTACTGTGACTTACACACACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCCGAACCTAGTTGGTGTTTTAATCTGGACTCTGGGATACAGTGTCTCCTACACACTCAATTGAATTaGGACAGGCTAAAATCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FPEPSWCFNLDSGIQCLLHTQLN*DRLKSV Trigger: CACAGATTTTAGCCTGTCCAAATTCAATTGAGTGTG...TAGGAGACACTGTATCCCAGAGTCCAGATTAAAACACCAACTAGGTTCGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR TCA 72 bp | CAGGAACACAGGCCCTGTATAATAAATAGATGGAACTaGAGCAATATAATGCTCTCCAATGACCTCCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: QEHRPCIINRWN*SNIMLSNDLLD Trigger: ATCCAGGAGGTCATTGGAGAGCATTATATTGCTTCAGTTCCATCTATTTATTATACAGGGCCTGTGTTCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR TCA 72 bp | GTTCTCTCCTTTATTTATCACATGGATCTCAGGGATTaGACTCACATAGTCAGGCTTGCTTCACAAAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VLSFIYHMDLRD*THIVRLASQKE Trigger: CTCCTTTTGTGAAGCAAGCCTGACTATGTGAGTTCAATCCCTGAGATCCATGTGATAAATAAAGGAGAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR TCA 72 bp | CTCAAAAATGTGGGAAAGGCCAGTTTGTTCTTTCCTTaGGCTGACCCATCTTGGAATGTCATAGTTTATGGT | + |
|
Preference number: 3 (lower is better) Translates to: LKNVGKASLFFP*ADPSWNVIVYG Trigger: ACCATAAACTATGACATTCCAAGATGGGTCAGCTCAAGGAAAGAACAAACTGGCCTTTCCCACATTTTTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| 3UTR TCA 72 bp | GGTCCTTATCCATTTTCAATTTCTCAATCTCCTTCCTaGTTGGAGCAAATTTCTCAATCACAGCATCGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GPYPFSISQSPS*LEQISQSQHRP Trigger: TGGCCGATGCTGTGATTGAGAAATTTGCTCCAATCAGGAAGGAGATTGAGAAATTGAAAATGGATAAGGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTAAGTCACAGTACAACGTTGAGGAGTTGGTTCTCTCCTTTATTTATCACATCCGATTTTGACATCTaGGAAGAAGGGTCTCGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: CVSHSTTLRSWFSPLFITSDFDI*EEGSRR Trigger: TCTTCGAGACCCTTCTTCCAAGATGTCAAAATCGGA...TGTGATAAATAAAGGAGAGAACCAACTCCTCAACGTTGTACTGTGACTTACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTAAGTCACAGTACAACGTTGAGGAGTTGGTTCTCTCCTTTATTTATCACATACAACGTTGAGGAGTaGGTTCTCTCCTTTATTTAT | + |
|
Preference number: 3 (lower is better) Translates to: CVSHSTTLRSWFSPLFITYNVEE*VLSFIY Trigger: ATAAATAAAGGAGAGAACCAACTCCTCAACGTTGTA...TGTGATAAATAAAGGAGAGAACCAACTCCTCAACGTTGTACTGTGACTTACACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS-3UTR TCA 90 bp | AGAATGCCTTGTGCACAGCAGGCAGCTCTGCTGTCCCACCGCTTGTCTCGCAGGTGTGAAGTGCCCGGATaGAGCGCCAGCACTCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: RMPCAQQAALLSHRLSRRCEVPG*SASTHG Trigger: CCCGTGAGTGCTGGCGCTTCATCCGGGCACTTCACA...CCTGCGAGACAAGCGGTGGGACAGCAGAGCTGCCTGCTGTGCACAAGGCATTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGTGCACAGCAGGCAGCTCTGCTGTCCCACCGCTTGTCTCGCAGGAGTGCATCCAGGATGCTCTGCTaGAGGACGGTGGGGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PCAQQAALLSHRLSRRSASRMLC*RTVGSW Trigger: CCAAGACCCCACCGTCCTCCAGCAGAGCATCCTGGA...TGCACTCCTGCGAGACAAGCGGTGGGACAGCAGAGCTGCCTGCTGTGCACAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| CDS-3UTR GCA 90 bp | GCACAGCAGGCAGCTCTGCTGTCCCACCGCTTGTCTCGCAGGAGTGCATGGCAACTGGGGAGCCAGAGTTaGTGCGGGTCCTTTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AQQAALLSHRLSRRSAWQLGSQS*CGSFVK Trigger: CTTCACAAAGGACCCGCAGCAACTCTGGCTCCCCAG...TTGCCATGCACTCCTGCGAGACAAGCGGTGGGACAGCAGAGCTGCCTGCTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| 3UTR CAA 72 bp | CCTTGTGCACAGCAGGCAGCTCTGCTGTCCCACCGCTaGTCTCGCAGGAGTGCATGGCAATTTGGTTCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PCAQQAALLSHR*SRRSAWQFGSH Trigger: GTGCGAACCAAATTGCCATGCACTCCTGCGAGACAAGCGGTGGGACAGCAGAGCTGCCTGCTGTGCACAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| CDS-3UTR TCA 90 bp | CGTGCAGAGCTATACTCTGTGATTTCACAGAGCCTGAGGCAGGCTGAGACGGGAGCTGCGGGTCCTTTGTaGAGTGCCCGGATGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RAELYSVISQSLRQAETGAAGPL*SARMKR Trigger: GCGCTTCATCCGGGCACTTCACAAAGGACCCGCAGC...TCCCGTCTCAGCCTGCCTCAGGCTCTGTGAAATCACAGAGTATAGCTCTGCACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS-3UTR GCA 90 bp | GGTGTGGACTTGATCTCTATGTCTCCAAGAAAGCCTGCCCTGAGCCCCAGCCCGATGTCCAGGATGCTCTaGTGGAGGACGGTGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVDLISMSPRKPALSPSPMSRML*WRTVGS Trigger: AGACCCCACCGTCCTCCAGCAGAGCATCCTGGACAT...CGGGCTGGGGCTCAGGGCAGGCTTTCTTGGAGACATAGAGATCAAGTCCACACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| CDS-3UTR GCA 90 bp | GCACAGCAGGCAGCTCTGCTGTCCCACCGCTTGTCTCGCAGGAGTGCATGGCAAGCACAGGATGTCTGCTaGCTGGAGTACAGGGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: AQQAALLSHRLSRRSAWQAQDVC*LEYRVC Trigger: ACATACCCTGTACTCCAGGCAGCAGACATCCTGTGC...TTGCCATGCACTCCTGCGAGACAAGCGGTGGGACAGCAGAGCTGCCTGCTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGCATCTCCAGCATGAATTTGGAAGTGAGGCCATGGGACCCATTTTTGGGGTGTGAAGTGCCCGGATaGAGCGCCAGCACTCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGISSMNLEVRPWDPFLGCEVPG*SASTHG Trigger: CCCGTGAGTGCTGGCGCTTCATCCGGGCACTTCACA...CCCCAAAAATGGGTCCCATGGCCTCACTTCCAAATTCATGCTGGAGATGCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGTGCACAGCAGGCAGCTCTGCTGTCCCACCGCTTGTCTCGCAGGAGTGCAAGGATTCCTGTAGGCTaGATGCCAGAAAACACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PCAQQAALLSHRLSRRSARIPVG*MPENTR Trigger: GCGAGTGTTTTCTGGCATTCAGCCTACAGGAATCCT...TGCACTCCTGCGAGACAAGCGGTGGGACAGCAGAGCTGCCTGCTGTGCACAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| CDS-3UTR GCA 90 bp | TTCGGCGGTGTGGACTTGATCTCTATGTCTCCAAGAAAGCCTGCCCTGAGCCCCGGGTCCTTTGTGAAGTaGCCGGATGAAGCGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FGGVDLISMSPRKPALSPGSFVK*PDEAPA Trigger: TGCTGGCGCTTCATCCGGGCACTTCACAAAGGACCC...GGGGCTCAGGGCAGGCTTTCTTGGAGACATAGAGATCAAGTCCACACCGCCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| CDS-3UTR GCA 90 bp | CGTGCAGAGCTATACTCTGTGATTTCACAGAGCCTGAGGCAGGCTGAGACGGGATGCAGTGTCCAAGCCTaGGCTACTGCGCACCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: RAELYSVISQSLRQAETGCSVQA*ATAHHL Trigger: GAGGTGGTGCGCAGTAGCGCAGGCTTGGACACTGCA...TCCCGTCTCAGCCTGCCTCAGGCTCTGTGAAATCACAGAGTATAGCTCTGCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| CDS-3UTR GCA 90 bp | TCTGTGATTTCACAGAGCCTGAGGCAGGCTGAGACGGGAAGCTTCCCTTCACTGCTGGGGAGCCAGAGTTaGTGCGGGTCCTTTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVISQSLRQAETGSFPSLLGSQS*CGSFVK Trigger: CTTCACAAAGGACCCGCAGCAACTCTGGCTCCCCAG...CAGTGAAGGGAAGCTTCCCGTCTCAGCCTGCCTCAGGCTCTGTGAAATCACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS-3UTR TCA 90 bp | GTGAAGTCTGTCACAGCCTTGCGGAATTTCTGTACAATCTCCTCTGGGCTGTCTTGTGAAGTGCCCGGATaGAGCGCCAGCACTCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: VKSVTALRNFCTISSGLSCEVPG*SASTHG Trigger: CCCGTGAGTGCTGGCGCTTCATCCGGGCACTTCACA...AGACAGCCCAGAGGAGATTGTACAGAAATTCCGCAAGGCTGTGACAGACTTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135960.8 ENSMUST00000198044.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCAGAGGTGGGACAGGCTCACACCCTTTGTGGTGTCCGGTCATTAAAGTTACAGTCATGTCCAGGATaGTCTGCTGGAGGACGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PAEVGQAHTLCGVRSLKLQSCPG*SAGGRW Trigger: CCACCGTCCTCCAGCAGAGCATCCTGGACATGACTG...TAACTTTAATGACCGGACACCACAAAGGGTGTGAGCCTGTCCCACCTCTGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| CDS-3UTR GCA 90 bp | GTTCGGCGGTGTGGACTTGATCTCTATGTCTCCAAGAAAGCCTGCCCTGAGCCCGTAGCACAGGATGTCTaGTGCCTGGAGTACAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VRRCGLDLYVSKKACPEPVAQDV*CLEYRV Trigger: TACCCTGTACTCCAGGCAGCAGACATCCTGTGCTAC...GGGCTCAGGGCAGGCTTTCTTGGAGACATAGAGATCAAGTCCACACCGCCGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGTACCTTGAGCCCGAGCCACCTTGCTAGCACAAGTCAAGTCATTCCAATAAGGACGGTGGGGTCTTaGGGGACAGTGATGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGTLSPSHLASTSQVIPIRTVGS*GTVMEW Trigger: CCACTCCATCACTGTCCCCCAAGACCCCACCGTCCT...TATTGGAATGACTTGACTTGTGCTAGCAAGGTGGCTCGGGCTCAAGGTACCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS-3UTR CCA 90 bp | GCGGAATTTCTGTACAATCTCCTCTGGGCTGTCTGTTATTCGAACAGTGGCGAGTCCAGGATGCTCTGCTaGAGGACGGTGGGGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AEFLYNLLWAVCYSNSGESRMLC*RTVGSW Trigger: CCAAGACCCCACCGTCCTCCAGCAGAGCATCCTGGA...CTCGCCACTGTTCGAATAACAGACAGCCCAGAGGAGATTGTACAGAAATTCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR CAA 72 bp | GCCAACATACTGGCCAGTGAAAGACTGGTAGGTGGATaGTCCCAGAACGCTAGACCTAGGTGGGAAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ANILASERLVGG*SQNARPRWEVE Trigger: CTCCACTTCCCACCTAGGTCTAGCGTTCTGGGACAATCCACCTACCAGTCTTTCACTGGCCAGTATGTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| CDS-3UTR TCA 90 bp | TACAGGTGCATGCTAAAGCCAGAGATATCTGACCCCTTAGTGCTGGCATTTGCAGGTCTTGGGGGACAGTaGTGGAGTGGAGGTCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: YRCMLKPEISDPLVLAFAGLGGQ*WSGGPR Trigger: TCGTGGACCTCCACTCCATCACTGTCCCCCAAGACC...TGCAAATGCCAGCACTAAGGGGTCAGATATCTCTGGCTTTAGCATGCACCTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| CDS-3UTR TCA 90 bp | GGTAGTCCTGTGCATTTCATTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTCTTGGGGGACAGTaGTGGAGTGGAGGTCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: GSPVHFIVVCVCVCVCVCGLGGQ*WSGGPR Trigger: TCGTGGACCTCCACTCCATCACTGTCCCCCAAGACC...ACACACACACACACACACACACACACACACCACAATGAAATGCACAGGACTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS-3UTR TCA 90 bp | GTAGGTGGATTGTCCCAGAACGCTAGACCTAGGTGGGAAGTGGAGTCTGGACTCGTCTCACCATGCAGGTaGGGATCCAACTTAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VGGLSQNARPRWEVESGLVSPCR*GSNLTE Trigger: CTCAGTTAAGTTGGATCCTCACCTGCATGGTGAGAC...GAGTCCAGACTCCACTTCCCACCTAGGTCTAGCGTTCTGGGACAATCCACCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| CDS-3UTR TCA 90 bp | TGCCAGTCAGTTTCTCCTTCCACCATGCTGGCCCTGTGGATTGAGCTCCAGCTAGTCAGGGTCCGATTTTaGCATCTTGGAAGAAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CQSVSPSTMLALWIELQLVRVRF*HLGRRV Trigger: GACCCTTCTTCCAAGATGTCAAAATCGGACCCTGAC...TAGCTGGAGCTCAATCCACAGGGCCAGCATGGTGGAAGGAGAAACTGACTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| CDS-3UTR GCA 90 bp | CAATCCATCAAGGGGCCGCCTCAAAAATGTGGGAAAGGCCAGTTTGTTCTTTCCGGGTCCTTTGTGAAGTaGCCGGATGAAGCGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSIKGPPQKCGKGQFVLSGSFVK*PDEAPA Trigger: TGCTGGCGCTTCATCCGGGCACTTCACAAAGGACCC...GGAAAGAACAAACTGGCCTTTCCCACATTTTTGAGGCGGCCCCTTGATGGATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| CDS-3UTR GCA 90 bp | GAAGTCTGTCACAGCCTTGCGGAATTTCTGTACAATCTCCTCTGGGCTGTCTGTGGGTCCTTTGTGAAGTaGCCGGATGAAGCGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EVCHSLAEFLYNLLWAVCGSFVK*PDEAPA Trigger: TGCTGGCGCTTCATCCGGGCACTTCACAAAGGACCC...ACAGACAGCCCAGAGGAGATTGTACAGAAATTCCGCAAGGCTGTGACAGACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135960.8 ENSMUST00000198044.2 |
||
| CDS-3UTR GCA 90 bp | GTGAAGTCTGTCACAGCCTTGCGGAATTTCTGTACAATCTCCTCTGGGCTGTCTCTGGGGAGCCAGAGTTaGTGCGGGTCCTTTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VKSVTALRNFCTISSGLSLGSQS*CGSFVK Trigger: CTTCACAAAGGACCCGCAGCAACTCTGGCTCCCCAG...AGACAGCCCAGAGGAGATTGTACAGAAATTCCGCAAGGCTGTGACAGACTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135960.8 ENSMUST00000198044.2 |
||
| CDS-3UTR GCA 90 bp | CAATCCATCAAGGGGCCGCCTCAAAAATGTGGGAAAGGCCAGTTTGTTCTTTCCATGTCCAGGATGCTCTaGTGGAGGACGGTGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSIKGPPQKCGKGQFVLSMSRML*WRTVGS Trigger: AGACCCCACCGTCCTCCAGCAGAGCATCCTGGACAT...GGAAAGAACAAACTGGCCTTTCCCACATTTTTGAGGCGGCCCCTTGATGGATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| CDS-3UTR GCA 90 bp | GTGAAGTCTGTCACAGCCTTGCGGAATTTCTGTACAATCTCCTCTGGGCTGTCTATGTCCAGGATGCTCTaGTGGAGGACGGTGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VKSVTALRNFCTISSGLSMSRML*WRTVGS Trigger: AGACCCCACCGTCCTCCAGCAGAGCATCCTGGACAT...AGACAGCCCAGAGGAGATTGTACAGAAATTCCGCAAGGCTGTGACAGACTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR CAA 72 bp | CTGCTGAGCCATCTTGCTGGCCCTGCAAAATCAATCTaGATACAGGCCTTGGGATGTAAGCCAGGACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSHLAGPAKSI*IQALGCKPGLP Trigger: TGGCAGTCCTGGCTTACATCCCAAGGCCTGTATCAAGATTGATTTTGCAGGGCCAGCAAGATGGCTCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGCATCTCCAGCATGAATTTGGAAGTGAGGCCATGGGACCCATTTTTGGGGAGGATTCCTGTAGGCTaGATGCCAGAAAACACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: AGISSMNLEVRPWDPFLGRIPVG*MPENTR Trigger: GCGAGTGTTTTCTGGCATTCAGCCTACAGGAATCCT...CCCCAAAAATGGGTCCCATGGCCTCACTTCCAAATTCATGCTGGAGATGCCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCATGCGCATCCATGTGCTGGACTTaGTCCTCCCCGACAGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: LLHCPLTSHMFCGMHACASMCWT*SSPTGT Trigger: CGTTCCTGTCGGGGAGGATCAAGTCCAGCACATGGA...TGCGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| CDS-3UTR GCA 90 bp | CCTTGCGGAATTTCTGTACAATCTCCTCTGGGCTGTCTGTTATTCGAACAGTGGGGGTCCTTTGTGAAGTaGCCGGATGAAGCGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PCGISVQSPLGCLLFEQWGSFVK*PDEAPA Trigger: TGCTGGCGCTTCATCCGGGCACTTCACAAAGGACCC...CCACTGTTCGAATAACAGACAGCCCAGAGGAGATTGTACAGAAATTCCGCAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135960.8 ENSMUST00000198044.2 |
||
| CDS-3UTR GCA 90 bp | TACAGGTGCATGCTAAAGCCAGAGATATCTGACCCCTTAGTGCTGGCATTTGCACAGTCATGTCCAGGATaGTCTGCTGGAGGACGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YRCMLKPEISDPLVLAFAQSCPG*SAGGRW Trigger: CCACCGTCCTCCAGCAGAGCATCCTGGACATGACTG...TGCAAATGCCAGCACTAAGGGGTCAGATATCTCTGGCTTTAGCATGCACCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| CDS-3UTR GCA 90 bp | AGAATGCCTTGTGCACAGCAGGCAGCTCTGCTGTCCCACCGCTTGTCTCGCAGGTCAGACACCTTAGACTaGTGGAAAAGGATACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RMPCAQQAALLSHRLSRRSDTLD*WKRILF Trigger: GAAAAGTATCCTTTTCCAGCAGTCTAAGGTGTCTGA...CCTGCGAGACAAGCGGTGGGACAGCAGAGCTGCCTGCTGTGCACAAGGCATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTCACAGCCTTGCGGAATTTCTGTACAATCTCCTCTGGGCTGTCTGTTATTAGGACGGTGGGGTCTTaGGGGACAGTGATGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVTALRNFCTISSGLSVIRTVGS*GTVMEW Trigger: CCACTCCATCACTGTCCCCCAAGACCCCACCGTCCT...AATAACAGACAGCCCAGAGGAGATTGTACAGAAATTCCGCAAGGCTGTGACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCAAGCACACGCCATGGCTCAGTAATTGTTCACGTTTTCGGGAATACTTCATCCAGGATGCTCTGCTaGAGGACGGTGGGGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QASTRHGSVIVHVFGNTSSRMLC*RTVGSW Trigger: CCAAGACCCCACCGTCCTCCAGCAGAGCATCCTGGA...TGAAGTATTCCCGAAAACGTGAACAATTACTGAGCCATGGCGTGTGCTTGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCGGAATTTCTGTACAATCTCCTCTGGGCTGTCTGTTATTCGAACAGTGGCGTGTGTTCAGACACCTaGGGAGCCAGAGTTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LAEFLYNLLWAVCYSNSGVCSDT*GARVAA Trigger: CGCAGCAACTCTGGCTCCCCAGGTGTCTGAACACAC...GCCACTGTTCGAATAACAGACAGCCCAGAGGAGATTGTACAGAAATTCCGCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198044.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGTACCTTGAGCCCGAGCCACCTTGCTAGCACAAGTCAAGTCATTCCAATAAGGATTCCTGTAGGCTaGATGCCAGAAAACACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: AGTLSPSHLASTSQVIPIRIPVG*MPENTR Trigger: GCGAGTGTTTTCTGGCATTCAGCCTACAGGAATCCT...TATTGGAATGACTTGACTTGTGCTAGCAAGGTGGCTCGGGCTCAAGGTACCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS-3UTR CCA 90 bp | TCACAGCCTTGCGGAATTTCTGTACAATCTCCTCTGGGCTGTCTGTTATTCGAATCTCCACTCTCCTTCTaGGGAGCCAGAGTTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SQPCGISVQSPLGCLLFESPLSF*GARVAA Trigger: CGCAGCAACTCTGGCTCCCCAGAAGGAGAGTGGAGA...TTCGAATAACAGACAGCCCAGAGGAGATTGTACAGAAATTCCGCAAGGCTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGATTGAGACACAGACAGAAAGGAATCCTCTTTGTTCCAGGGGAGCAGCAATCTCCACTCTCCTTCTaGGGAGCCAGAGTTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SRLRHRQKGILFVPGEQQSPLSF*GARVAA Trigger: CGCAGCAACTCTGGCTCCCCAGAAGGAGAGTGGAGA...TTGCTGCTCCCCTGGAACAAAGAGGATTCCTTTCTGTCTGTGTCTCAATCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGGCTGAGTTCTCGTGTGGCTGAGTTCTCAGGCTCCTTCAGGTCCGAGGCAGACACCTTAGACTGCTaGAAAAGGATACTTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VWLSSRVAEFSGSFRSEADTLDC*KRILFS Trigger: AGAGAAAAGTATCCTTTTCCAGCAGTCTAAGGTGTC...TGCCTCGGACCTGAAGGAGCCTGAGAACTCAGCCACACGAGAACTCAGCCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGCATCTCCAGCATGAATTTGGAAGTGAGGCCATGGGACCCATTTTTGGGGGCCTTTGCCTTCCACTaGTGTAAATGCTGCAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: AGISSMNLEVRPWDPFLGAFAFH*CKCCNR Trigger: TCGATTGCAGCATTTACACCAGTGGAAGGCAAAGGC...CCCCAAAAATGGGTCCCATGGCCTCACTTCCAAATTCATGCTGGAGATGCCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR CAA 72 bp | TCTTCAGCCTCCAGAATGCTGGGATGCTATGCCTTTTaGGTGACTCAAGCAGGCTCGCCTTTTCTAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSASRMLGCYAF*VTQAGSPFLSP Trigger: TGGGCTTAGAAAAGGCGAGCCTGCTTGAGTCACCAAAAAGGCATAGCATCCCAGCATTCTGGAGGCTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| CDS-3UTR TCA 90 bp | TCCGATTTTGACATCTTGGAAGAAGGGTCTCGAAGAGATTTCACTTTCTTCATGTGTGAAGTGCCCGGATaGAGCGCCAGCACTCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: SDFDILEEGSRRDFTFFMCEVPG*SASTHG Trigger: CCCGTGAGTGCTGGCGCTTCATCCGGGCACTTCACA...CATGAAGAAAGTGAAATCTCTTCGAGACCCTTCTTCCAAGATGTCAAAATCGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| CDS-3UTR TCA 90 bp | CAACTCTTACTTTCCCACTTAATTTTGGACCATTTTGAACCAGCAGAGGTGGGAGGTCTTGGGGGACAGTaGTGGAGTGGAGGTCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: QLLLSHLILDHFEPAEVGGLGGQ*WSGGPR Trigger: TCGTGGACCTCCACTCCATCACTGTCCCCCAAGACC...TCCCACCTCTGCTGGTTCAAAATGGTCCAAAATTAAGTGGGAAAGTAAGAGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| CDS-3UTR TCA 90 bp | GCTTTTGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCATGCGCCTTCGAGCTAGATCCTaGACTAGTTCCATGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AFALSSDITHVLWHACMRLRARS*TSSMCW Trigger: CCAGCACATGGAACTAGTTCAGGATCTAGCTCGAAG...GCGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| CDS-3UTR GCA 90 bp | CTTTTGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCATGCGCAGCACAGGATGTCTGCTaGCTGGAGTACAGGGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: LLHCPLTSHMFCGMHACAAQDVC*LEYRVC Trigger: ACATACCCTGTACTCCAGGCAGCAGACATCCTGTGC...TGCGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCACAGCCTTGCGGAATTTCTGTACAATCTCCTCTGGGCTGTCTGTTATTCGCACAGGATGTCTGCTaGCTGGAGTACAGGGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: LSQPCGISVQSPLGCLLFAQDVC*LEYRVC Trigger: ACATACCCTGTACTCCAGGCAGCAGACATCCTGTGC...GAATAACAGACAGCCCAGAGGAGATTGTACAGAAATTCCGCAAGGCTGTGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135960.8 ENSMUST00000198044.2 |
||
| CDS-3UTR GCA 90 bp | CCTTGCGGAATTTCTGTACAATCTCCTCTGGGCTGTCTGTTATTCGAACAGTGGGTAGCACAGGATGTCTaGTGCCTGGAGTACAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PCGISVQSPLGCLLFEQWVAQDV*CLEYRV Trigger: TACCCTGTACTCCAGGCAGCAGACATCCTGTGCTAC...CCACTGTTCGAATAACAGACAGCCCAGAGGAGATTGTACAGAAATTCCGCAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135960.8 ENSMUST00000198044.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCCGAACCTAGTTGGTGTTTTAATCTGGACTCTGGGATACAGTGTCTCCTATCTCCACTCTCCTTCTaGGGAGCCAGAGTTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: FPEPSWCFNLDSGIQCLLSPLSF*GARVAA Trigger: CGCAGCAACTCTGGCTCCCCAGAAGGAGAGTGGAGA...TAGGAGACACTGTATCCCAGAGTCCAGATTAAAACACCAACTAGGTTCGGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR CAA 72 bp | TCCTCTGGGCTGTCTGTTATTCGAACAGTGGCGAGTTaGTCAGGGTCCGATTTTGACATCTTGGAAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSGLSVIRTVAS*SGSDFDILEEG Trigger: CCCTTCTTCCAAGATGTCAAAATCGGACCCTGACAAACTCGCCACTGTTCGAATAACAGACAGCCCAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCATGCGCAGTCTCACCATGCAGGTaGGGATCCAACTTAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLHCPLTSHMFCGMHACAVSPCR*GSNLTE Trigger: CTCAGTTAAGTTGGATCCTCACCTGCATGGTGAGAC...TGCGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCCGAACCTAGTTGGTGTTTTAATCTGGACTCTGGGATACAGTGTCTCCTACTCGTAGGTGACCTCTaGCGTGAAGTCTGTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: FPEPSWCFNLDSGIQCLLLVGDL*REVCHS Trigger: GCTGTGACAGACTTCACGTCAGAGGTCACCTACGAG...TAGGAGACACTGTATCCCAGAGTCCAGATTAAAACACCAACTAGGTTCGGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| CDS-3UTR GCA 90 bp | TGCCAGTCAGTTTCTCCTTCCACCATGCTGGCCCTGTGGATTGAGCTCCAGCTATCAGACACCTTAGACTaGTGGAAAAGGATACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CQSVSPSTMLALWIELQLSDTLD*WKRILF Trigger: GAAAAGTATCCTTTTCCAGCAGTCTAAGGTGTCTGA...TAGCTGGAGCTCAATCCACAGGGCCAGCATGGTGGAAGGAGAAACTGACTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS-3UTR GCA 90 bp | GGAATTTCTGTACAATCTCCTCTGGGCTGTCTGTTATTCGAACAGTGGCGAGTTGCACAGGATGTCTGCTaGCTGGAGTACAGGGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: GISVQSPLGCLLFEQWRVAQDVC*LEYRVC Trigger: ACATACCCTGTACTCCAGGCAGCAGACATCCTGTGC...AACTCGCCACTGTTCGAATAACAGACAGCCCAGAGGAGATTGTACAGAAATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135960.8 ENSMUST00000198044.2 |
||
| CDS-3UTR GCA 90 bp | TCACAGCCTTGCGGAATTTCTGTACAATCTCCTCTGGGCTGTCTGTTATTCGAAGTAGCACAGGATGTCTaGTGCCTGGAGTACAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SQPCGISVQSPLGCLLFEVAQDV*CLEYRV Trigger: TACCCTGTACTCCAGGCAGCAGACATCCTGTGCTAC...TTCGAATAACAGACAGCCCAGAGGAGATTGTACAGAAATTCCGCAAGGCTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135960.8 ENSMUST00000198044.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCAGAGGTGGGACAGGCTCACACCCTTTGTGGTGTCCGGTCATTAAAGTTAAAGGATACTTTTCTCTaGGTTTATGCCACAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PAEVGQAHTLCGVRSLKLKDTFL*VYATGK Trigger: CTTGCCTGTGGCATAAACCCAGAGAAAAGTATCCTT...TAACTTTAATGACCGGACACCACAAAGGGTGTGAGCCTGTCCCACCTCTGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| CDS-3UTR CCA 90 bp | TGCCAGTCAGTTTCTCCTTCCACCATGCTGGCCCTGTGGATTGAGCTCCAGCTAGACACCTTAGACTGCTaGAAAAGGATACTTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CQSVSPSTMLALWIELQLDTLDC*KRILFS Trigger: AGAGAAAAGTATCCTTTTCCAGCAGTCTAAGGTGTC...TAGCTGGAGCTCAATCCACAGGGCCAGCATGGTGGAAGGAGAAACTGACTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR CAA 72 bp | AACCCTGGAATCTACCTGGTGGAAGAAAGCCAGCTTTaGCACTGTCCTCTGACATCACACATGTTTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NPGIYLVEESQL*HCPLTSHMFCG Trigger: GCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAGCTGGCTTTCTTCCACCAGGTAGATTCCAGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS-3UTR TCA 90 bp | CAAGCAAGCACACGCCATGGCTCAGTAATTGTTCACGTTTTCGGGAATACTTCAGTCTCACCATGCAGGTaGGGATCCAACTTAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QASTRHGSVIVHVFGNTSVSPCR*GSNLTE Trigger: CTCAGTTAAGTTGGATCCTCACCTGCATGGTGAGAC...TGAAGTATTCCCGAAAACGTGAACAATTACTGAGCCATGGCGTGTGCTTGCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS-3UTR GCA 90 bp | GGTTCTCTCCTTTATTTATCACATGGATCTCAGGGATTGAACTCACATAGTCAGGGGAGCCAGAGTTGCTaGGGGTCCTTTGTGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSLLYLSHGSQGLNSHSQGSQSC*GSFVKC Trigger: GCACTTCACAAAGGACCCGCAGCAACTCTGGCTCCC...CTGACTATGTGAGTTCAATCCCTGAGATCCATGTGATAAATAAAGGAGAGAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS-3UTR GCA 90 bp | TCCGATTTTGACATCTTGGAAGAAGGGTCTCGAAGAGATTTCACTTTCTTCATGCAGTCATGTCCAGGATaGTCTGCTGGAGGACGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SDFDILEEGSRRDFTFFMQSCPG*SAGGRW Trigger: CCACCGTCCTCCAGCAGAGCATCCTGGACATGACTG...CATGAAGAAAGTGAAATCTCTTCGAGACCCTTCTTCCAAGATGTCAAAATCGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCCGAACCTAGTTGGTGTTTTAATCTGGACTCTGGGATACAGTGTCTCCTAGTAGCACAGGATGTCTaGTGCCTGGAGTACAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FPEPSWCFNLDSGIQCLLVAQDV*CLEYRV Trigger: TACCCTGTACTCCAGGCAGCAGACATCCTGTGCTAC...TAGGAGACACTGTATCCCAGAGTCCAGATTAAAACACCAACTAGGTTCGGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGTACCTTGAGCCCGAGCCACCTTGCTAGCACAAGTCAAGTCATTCCAATAAAGGATACTTTTCTCTaGGTTTATGCCACAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGTLSPSHLASTSQVIPIKDTFL*VYATGK Trigger: CTTGCCTGTGGCATAAACCCAGAGAAAAGTATCCTT...TATTGGAATGACTTGACTTGTGCTAGCAAGGTGGCTCGGGCTCAAGGTACCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCTGTCACAGCCTTGCGGAATTTCTGTACAATCTCCTCTGGGCTGTCTGTTGCCTTTGCCTTCCACTaGTGTAAATGCTGCAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: KSVTALRNFCTISSGLSVAFAFH*CKCCNR Trigger: TCGATTGCAGCATTTACACCAGTGGAAGGCAAAGGC...AACAGACAGCCCAGAGGAGATTGTACAGAAATTCCGCAAGGCTGTGACAGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135960.8 ENSMUST00000198044.2 |
||
| CDS-3UTR CCA 90 bp | GTGAAGTCTGTCACAGCCTTGCGGAATTTCTGTACAATCTCCTCTGGGCTGTCTCCGATTTTGACATCTTaGAAGAAGGGTCTCGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VKSVTALRNFCTISSGLSPILTS*KKGLEE Trigger: CTCTTCGAGACCCTTCTTCCAAGATGTCAAAATCGG...AGACAGCCCAGAGGAGATTGTACAGAAATTCCGCAAGGCTGTGACAGACTTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198044.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCCGAACCTAGTTGGTGTTTTAATCTGGACTCTGGGATACAGTGTCTCCTAGGATCGCCACCATGTTaGAAACACCAGCTCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FPEPSWCFNLDSGIQCLLGSPPC*KHQLCC Trigger: ACAGCAGAGCTGGTGTTTCCAACATGGTGGCGATCC...TAGGAGACACTGTATCCCAGAGTCCAGATTAAAACACCAACTAGGTTCGGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| CDS-3UTR CCA 90 bp | GCCCTCAGAGCTTTGGGAGAAGTCTTAAAAAGCACCAGTCTTGGAAGCAGGGGAGAGAGGCCAATTCTTTaGCTTTTGCAGATCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: ALRALGEVLKSTSLGSRGERPIL*LLQIQQ Trigger: TTGTTGGATCTGCAAAAGCCAAAGAATTGGCCTCTC...TCCCCTGCTTCCAAGACTGGTGCTTTTTAAGACTTCTCCCAAAGCTCTGAGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| CDS-3UTR TCA 90 bp | AATTTCTGTACAATCTCCTCTGGGCTGTCTGTTATTCGAACAGTGGCGAGTTTGGTCTCACCATGCAGGTaGGGATCCAACTTAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NFCTISSGLSVIRTVASLVSPCR*GSNLTE Trigger: CTCAGTTAAGTTGGATCCTCACCTGCATGGTGAGAC...CAAACTCGCCACTGTTCGAATAACAGACAGCCCAGAGGAGATTGTACAGAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135960.8 ENSMUST00000198044.2 |
||
| CDS-3UTR GCA 90 bp | TGTGTAAGTCACAGTACAACGTTGAGGAGTTGGTTCTCTCCTTTATTTATCACACTGGGGAGCCAGAGTTaGTGCGGGTCCTTTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CVSHSTTLRSWFSPLFITLGSQS*CGSFVK Trigger: CTTCACAAAGGACCCGCAGCAACTCTGGCTCCCCAG...TGTGATAAATAAAGGAGAGAACCAACTCCTCAACGTTGTACTGTGACTTACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTTGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCATGCGCAAGGATACTTTTCTCTaGGTTTATGCCACAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AFALSSDITHVLWHACMRKDTFL*VYATGK Trigger: CTTGCCTGTGGCATAAACCCAGAGAAAAGTATCCTT...GCGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS-3UTR CCA 90 bp | TGCACCTGCACAGTAAATACTGCACAAGCAAGCACACGCCATGGCTCAGTAATTCCGATTTTGACATCTTaGAAGAAGGGTCTCGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CTCTVNTAQASTRHGSVIPILTS*KKGLEE Trigger: CTCTTCGAGACCCTTCTTCCAAGATGTCAAAATCGG...AATTACTGAGCCATGGCGTGTGCTTGCTTGTGCAGTATTTACTGTGCAGGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| 3UTR CAA 72 bp | ACCAGTCTTGGAAGCAGGGGAGCTAGGCCTTCACTCTaGGACTTGCTTCTTATTTACTTAGTGACACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TSLGSRGARPSL*DLLLIYLVTLY Trigger: GTACAGTGTCACTAAGTAAATAAGAAGCAAGTCCAAGAGTGAAGGCCTAGCTCCCCTGCTTCCAAGACTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS-3UTR TCA 90 bp | CAACTCTTACTTTCCCACTTAATTTTGGACCATTTTGAACCAGCAGAGGTGGGACAGATGAAGAGGGGCTaGGATCTTGCATACGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QLLLSHLILDHFEPAEVGQMKRG*DLAYVS Trigger: TGAGACGTATGCAAGATCTCAGCCCCTCTTCATCTG...TCCCACCTCTGCTGGTTCAAAATGGTCCAAAATTAAGTGGGAAAGTAAGAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| CDS-3UTR CCA 90 bp | TGCACCTGCACAGTAAATACTGCACAAGCAAGCACACGCCATGGCTCAGTAATTAATGGACTTGGGCAATaGAAAGAACTCCCCATACTT | + |
|
Preference number: 4 (lower is better) Translates to: CTCTVNTAQASTRHGSVINGLGQ*KELPIL Trigger: AAGTATGGGGAGTTCTTTCCATTGCCCAAGTCCATT...AATTACTGAGCCATGGCGTGTGCTTGCTTGTGCAGTATTTACTGTGCAGGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| CDS-3UTR CCA 90 bp | GCCCTCAGAGCTTTGGGAGAAGTCTTAAAAAGCACCAGTCTTGGAAGCAGGGGAAATCTCCTTCCTGATTaGAGCAAATTTCTCAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALRALGEVLKSTSLGSRGNLLPD*SKFLNH Trigger: GTGATTGAGAAATTTGCTCCAATCAGGAAGGAGATT...TCCCCTGCTTCCAAGACTGGTGCTTTTTAAGACTTCTCCCAAAGCTCTGAGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| 3UTR CAA 72 bp | ACAGTGGCGAGTTTGTCAGGGTCCGATTTTGACATCTaGGAAGAAGGGTCTCGAAGAGATTTCACTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVASLSGSDFDI*EEGSRRDFTFF Trigger: GAAGAAAGTGAAATCTCTTCGAGACCCTTCTTCCAAGATGTCAAAATCGGACCCTGACAAACTCGCCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCACAGCCTTGCGGAATTTCTGTACAATCTCCTCTGGGCTGTCTGTTATTCGACACCTTAGACTGCTaGAAAAGGATACTTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSQPCGISVQSPLGCLLFDTLDC*KRILFS Trigger: AGAGAAAAGTATCCTTTTCCAGCAGTCTAAGGTGTC...GAATAACAGACAGCCCAGAGGAGATTGTACAGAAATTCCGCAAGGCTGTGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| CDS-3UTR CCA 90 bp | TACAGGTGCATGCTAAAGCCAGAGATATCTGACCCCTTAGTGCTGGCATTTGCAAACTCCCCATACTTTTaGTTGAAACTTCGAGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: YRCMLKPEISDPLVLAFANSPYF*LKLRAR Trigger: TCTAGCTCGAAGTTTCAACCAAAAGTATGGGGAGTT...TGCAAATGCCAGCACTAAGGGGTCAGATATCTCTGGCTTTAGCATGCACCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| 3UTR CAA 72 bp | CTCTTTATGAACTGCAAATACCCACTGGATTCAGGATaGCAGCATAGGACCTGTCTGCACAACACAGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LFMNCKYPLDSG*QHRTCLHNTDK Trigger: TTTGTCTGTGTTGTGCAGACAGGTCCTATGCTGCAATCCTGAATCCAGTGGGTATTTGCAGTTCATAAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR CAA 72 bp | TTATTCGAACAGTGGCGAGTTTGTCAGGGTCCGATTTaGACATCTTGGAAGAAGGGTCTCGAAGAGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFEQWRVCQGPI*TSWKKGLEEIS Trigger: TGAAATCTCTTCGAGACCCTTCTTCCAAGATGTCAAAATCGGACCCTGACAAACTCGCCACTGTTCGAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| 3UTR CAA 72 bp | CCTCCTCGAACACAGGAGAGGCCAATTCTTTGGCTTTaGCAGATCCAACAAGTAAAACCTTTCTTAAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPRTQERPILWL*QIQQVKPFLSG Trigger: ACCACTTAAGAAAGGTTTTACTTGTTGGATCTGCAAAAGCCAAAGAATTGGCCTCTCCTGTGTTCGAGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCTTCTTATTTACTTAGTGACACTGTACAGCTAATTCCATGTTCTACCCCTCTGTTATTCGAACAGTaGCGAGTTTGTCAGGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LASYLLSDTVQLIPCSTPLLFEQ*RVCQGP Trigger: CGGACCCTGACAAACTCGCCACTGTTCGAATAACAG...AGGGGTAGAACATGGAATTAGCTGTACAGTGTCACTAAGTAAATAAGAAGCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| 3UTR CAA 72 bp | TCATCAAATGCAGCTGATCATCACACTCAATTGAATTaGGACAGGCTAAAATCTGTGGGAGGAAAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSNAADHHTQLN*DRLKSVGGKLP Trigger: AGGCAGCTTTCCTCCCACAGATTTTAGCCTGTCCAAATTCAATTGAGTGTGATGATCAGCTGCATTTGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR CAA 72 bp | GTGTGTGTGTGTAAGTCACAGTACAACGTTGAGGAGTaGGTTCTCTCCTTTATTTATCACATGGATCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCKSQYNVEE*VLSFIYHMDLR Trigger: CCTGAGATCCATGTGATAAATAAAGGAGAGAACCAACTCCTCAACGTTGTACTGTGACTTACACACACACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR CAA 72 bp | GTGTGTGTGTGTGTGTGTGTAAGTCACAGTACAACGTaGAGGAGTTGGTTCTCTCCTTTATTTATCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVSHSTT*RSWFSPLFITW Trigger: CCATGTGATAAATAAAGGAGAGAACCAACTCCTCAACGTTGTACTGTGACTTACACACACACACACACACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| 3UTR CAA 72 bp | GGTTCTCTCCTTTATTTATCACATGGATCTCAGGGATaGAACTCACATAGTCAGGCTTGCTTCACAAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSLLYLSHGSQG*NSHSQACFTKG Trigger: TCCTTTTGTGAAGCAAGCCTGACTATGTGAGTTCAATCCCTGAGATCCATGTGATAAATAAAGGAGAGAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCTTCTTATTTACTTAGTGACACTGTACAGCTAATTCCATGTTCTACCCCTCTGTACAATCTCCTCTaGGCTGTCTGTTATTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LASYLLSDTVQLIPCSTPLYNLL*AVCYSN Trigger: GTTCGAATAACAGACAGCCCAGAGGAGATTGTACAG...AGGGGTAGAACATGGAATTAGCTGTACAGTGTCACTAAGTAAATAAGAAGCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| CDS-3UTR CCA 90 bp | TTAATCAGGAATCTACCACTTAAGAAGAGCTCTAACTTCGAGTTTTCTTTCTTGGCCTTTGCCTTCCACTaGTGTAAATGCTGCAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: LIRNLPLKKSSNFEFSFLAFAFH*CKCCNR Trigger: TCGATTGCAGCATTTACACCAGTGGAAGGCAAAGGC...CAAGAAAGAAAACTCGAAGTTAGAGCTCTTCTTAAGTGGTAGATTCCTGATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| 3UTR CAA 72 bp | AGATTGGACACTGAGTCAGTAAATGAAGACTTATCCTaGTCAATGTTAGCAGGTCCTAACCAATCCATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLDTESVNEDLS*SMLAGPNQSIK Trigger: CTTGATGGATTGGTTAGGACCTGCTAACATTGACAAGGATAAGTCTTCATTTACTGACTCAGTGTCCAATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| CDS-3UTR GCA 90 bp | TGTGTAAGTCACAGTACAACGTTGAGGAGTTGGTTCTCTCCTTTATTTATCACATCAGACACCTTAGACTaGTGGAAAAGGATACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CVSHSTTLRSWFSPLFITSDTLD*WKRILF Trigger: GAAAAGTATCCTTTTCCAGCAGTCTAAGGTGTCTGA...TGTGATAAATAAAGGAGAGAACCAACTCCTCAACGTTGTACTGTGACTTACACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
||
| CDS TCA 90 bp | CCTGGGGAGCCAGAGTTGCTGCGGGTCCTTTGTGAAGTGCCCGGATaGAGCGCCAGCACTCACGGGCCTTCCGCACAGAGAACAGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PGEPELLRVLCEVPG*SASTHGPSAQRTAP Trigger: TGGCGCTGTTCTCTGTGCGGAAGGCCCGTGAGTGCTGGCGCTTCATCCGGGCACTTCACAAAGGACCCGCAGCAACTCTGGCTCCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198044.2 |
||
| CDS TCA 90 bp | TCTGGGGAGCCAGAGTTGCTGCGGGTCCTTTGTGAAGTGCCCGGATaGAGCGCCAGCACTCACGGGCCTTCCGCACAGAGAACAGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGEPELLRVLCEVPG*SASTHGPSAQRTAP Trigger: TGGCGCTGTTCTCTGTGCGGAAGGCCCGTGAGTGCTGGCGCTTCATCCGGGCACTTCACAAAGGACCCGCAGCAACTCTGGCTCCCCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 |
||
| CDS-3UTR CAA 90 bp | AGAATGCCTTGTGCACAGCAGGCAGCTCTGCTGTCCCACCGCTTGTCTCGCAGGGAGGACGGTGGGGTCTaGGGGGACAGTGATGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RMPCAQQAALLSHRLSRREDGGV*GDSDGV Trigger: CACTCCATCACTGTCCCCCAAGACCCCACCGTCCTC...CCTGCGAGACAAGCGGTGGGACAGCAGAGCTGCCTGCTGTGCACAAGGCATTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145650.8 |
||
| CDS GCA 90 bp | ACTCTCCTTCTGGGGAGCCAGAGTTGCTGCGGGTCCTTTGTGAAGTaGCCGGATGAAGCGCCAGCACTCACGGGCCTTCCGCACAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TLLLGSQSCCGSFVK*PDEAPALTGLPHRE Trigger: TTCTCTGTGCGGAAGGCCCGTGAGTGCTGGCGCTTCATCCGGGCACTTCACAAAGGACCCGCAGCAACTCTGGCTCCCCAGAAGGAGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 |
||
| CDS GCA 90 bp | TTCAGACACCTGGGGAGCCAGAGTTGCTGCGGGTCCTTTGTGAAGTaGCCGGATGAAGCGCCAGCACTCACGGGCCTTCCGCACAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FRHLGSQSCCGSFVK*PDEAPALTGLPHRE Trigger: TTCTCTGTGCGGAAGGCCCGTGAGTGCTGGCGCTTCATCCGGGCACTTCACAAAGGACCCGCAGCAACTCTGGCTCCCCAGGTGTCTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198044.2 |
||
| CDS GCA 90 bp | GCCAGAAAACACTCGCTCTCCACTCTCCTTCTGGGGAGCCAGAGTTaGTGCGGGTCCTTTGTGAAGTGCCCGGATGAAGCGCCAGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: ARKHSLSTLLLGSQS*CGSFVKCPDEAPAL Trigger: GAGTGCTGGCGCTTCATCCGGGCACTTCACAAAGGACCCGCAGCAACTCTGGCTCCCCAGAAGGAGAGTGGAGAGCGAGTGTTTTCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 |
||
| CDS GCA 90 bp | TTTATGCCACAGGCAAGAAGCACAGCAGTCATGTCCAGGATGCTCTaGTGGAGGACGGTGGGGTCTTGGGGGACAGTGATGGAGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FMPQARSTAVMSRML*WRTVGSWGTVMEWR Trigger: CCTCCACTCCATCACTGTCCCCCAAGACCCCACCGTCCTCCAGCAGAGCATCCTGGACATGACTGCTGTGCTTCTTGCCTGTGGCATAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 |
||
| CDS GCA 90 bp | CTCCCCGACAGGAACGTGTGTGGACTTGTAGCACAGGATGTCTGCTaGCTGGAGTACAGGGTATGTGAGCAGGCCTACGGTCCCATCATG | + |
|
Preference number: 5 (lower is better) Translates to: LPDRNVCGLVAQDVC*LEYRVCEQAYGPIM Trigger: CATGATGGGACCGTAGGCCTGCTCACATACCCTGTACTCCAGGCAGCAGACATCCTGTGCTACAAGTCCACACACGTTCCTGTCGGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| CDS GCA 90 bp | GCTGCCTGGAGTACAGGGTATGTGAGCAGGCCTACGGTCCCATCATaGTTCTGCTTCGCAGCCTTTGCCTTCCACTGGTGTAAATGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AAWSTGYVSRPTVPS*FCFAAFAFHWCKCC Trigger: GCAGCATTTACACCAGTGGAAGGCAAAGGCTGCGAAGCAGAAGCATGATGGGACCGTAGGCCTGCTCACATACCCTGTACTCCAGGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 ENSMUST00000198044.2 |
||
| CDS CCA 90 bp | ACAGCAGTCATGTCCAGGATGCTCTGCTGGAGGACGGTGGGGTCTTaGGGGACAGTGATGGAGTGGAGGTCCACGATGCTGTATATCACT | + |
|
Preference number: 5 (lower is better) Translates to: TAVMSRMLCWRTVGS*GTVMEWRSTMLYIT Trigger: AGTGATATACAGCATCGTGGACCTCCACTCCATCACTGTCCCCCAAGACCCCACCGTCCTCCAGCAGAGCATCCTGGACATGACTGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 |
||
| CDS TCA 90 bp | TGGACTTGTAGCACAGGATGTCTGCTGCCTGGAGTACAGGGTATGTaGGCAGGCCTACGGTCCCATCATGCTTCTGCTTCGCAGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: WTCSTGCLLPGVQGM*AGLRSHHASASQPL Trigger: CAAAGGCTGCGAAGCAGAAGCATGATGGGACCGTAGGCCTGCTCACATACCCTGTACTCCAGGCAGCAGACATCCTGTGCTACAAGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
||
| CDS TCA 90 bp | AGACCTTGTAGCACAGGATGTCTGCTGCCTGGAGTACAGGGTATGTaGGCAGGCCTACGGTCCCATCATGCTTCTGCTTCGCAGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RPCSTGCLLPGVQGM*AGLRSHHASASQPL Trigger: CAAAGGCTGCGAAGCAGAAGCATGATGGGACCGTAGGCCTGCTCACATACCCTGTACTCCAGGCAGCAGACATCCTGTGCTACAAGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
||
| CDS TCA 90 bp | TGCAATCGAGGCAGTCTCACCATGCAGGTGAGGATCCAACTTAACTaGGTGTGTTCAGACACCTGGGGAGCCAGAGTTGCTGCGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CNRGSLTMQVRIQLN*VCSDTWGARVAAGP Trigger: AGGACCCGCAGCAACTCTGGCTCCCCAGGTGTCTGAACACACTCAGTTAAGTTGGATCCTCACCTGCATGGTGAGACTGCCTCGATTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198044.2 |
||
| CDS TCA 90 bp | GGATGTTGTAGCACAGGATGTCTGCTGCCTGGAGTACAGGGTATGTaGGCAGGCCTACGGTCCCATCATGCTTCTGCTTCGCAGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GCCSTGCLLPGVQGM*AGLRSHHASASQPL Trigger: CAAAGGCTGCGAAGCAGAAGCATGATGGGACCGTAGGCCTGCTCACATACCCTGTACTCCAGGCAGCAGACATCCTGTGCTACAACATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198044.2 |
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| CDS CCA 90 bp | CCTACGGTCCCATCATGCTTCTGCTTCGCAGCCTTTGCCTTCCACTaGTGTAAATGCTGCAATCGAGGCAGTCTCACCATGCAGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: PTVPSCFCFAAFAFH*CKCCNRGSLTMQVR Trigger: CCTCACCTGCATGGTGAGACTGCCTCGATTGCAGCATTTACACCAGTGGAAGGCAAAGGCTGCGAAGCAGAAGCATGATGGGACCGTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 ENSMUST00000198044.2 |
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| CDS TCA 90 bp | TGTCCAGGATGCTCTGCTGGAGGACGGTGGGGTCTTGGGGGACAGTaGTGGAGTGGAGGTCCACGATGCTGTATATCACTGTGTCATATT | + |
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Preference number: 5 (lower is better) Translates to: CPGCSAGGRWGLGGQ*WSGGPRCCISLCHI Trigger: AATATGACACAGTGATATACAGCATCGTGGACCTCCACTCCATCACTGTCCCCCAAGACCCCACCGTCCTCCAGCAGAGCATCCTGGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 |
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| CDS CCA 90 bp | ATGCTCTGCTGGAGGACGGTGGGGTCTTGGGGGACAGTGATGGAGTaGAGGTCCACGATGCTGTATATCACTGTGTCATATTCCTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: MLCWRTVGSWGTVME*RSTMLYITVSYSSC Trigger: ACAGGAGGAATATGACACAGTGATATACAGCATCGTGGACCTCCACTCCATCACTGTCCCCCAAGACCCCACCGTCCTCCAGCAGAGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 |
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| CDS GCA 90 bp | TGGAGTACAGGGTATGTGAGCAGGCCTACGGTCCCATCATGCTTCTaGTTCGCAGCCTTTGCCTTCCACTGGTGTAAATGCTGCAATCGA | + |
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Preference number: 5 (lower is better) Translates to: WSTGYVSRPTVPSCF*FAAFAFHWCKCCNR Trigger: TCGATTGCAGCATTTACACCAGTGGAAGGCAAAGGCTGCGAAGCAGAAGCATGATGGGACCGTAGGCCTGCTCACATACCCTGTACTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 ENSMUST00000198044.2 |
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| CDS TCA 90 bp | TCCACTGGTGTAAATGCTGCAATCGAGGCAGTCTCACCATGCAGGTaGGGATCCAACTTAACTGAGTGTGTTCAGACACCTGGGGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: STGVNAAIEAVSPCR*GSNLTECVQTPGEP Trigger: TGGCTCCCCAGGTGTCTGAACACACTCAGTTAAGTTGGATCCTCACCTGCATGGTGAGACTGCCTCGATTGCAGCATTTACACCAGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198044.2 |
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| CDS-3UTR CAA 90 bp | TTTCCCGAACCTAGTTGGTGTTTTAATCTGGACTCTGGGATACAGTGTCTCCTAGAGGACGGTGGGGTCTaGGGGGACAGTGATGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: FPEPSWCFNLDSGIQCLLEDGGV*GDSDGV Trigger: CACTCCATCACTGTCCCCCAAGACCCCACCGTCCTC...TAGGAGACACTGTATCCCAGAGTCCAGATTAAAACACCAACTAGGTTCGGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| CDS-3UTR CAA 90 bp | AATTTCTGTACAATCTCCTCTGGGCTGTCTGTTATTCGAACAGTGGCGAGTTTGGAGGACGGTGGGGTCTaGGGGGACAGTGATGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: NFCTISSGLSVIRTVASLEDGGV*GDSDGV Trigger: CACTCCATCACTGTCCCCCAAGACCCCACCGTCCTC...CAAACTCGCCACTGTTCGAATAACAGACAGCCCAGAGGAGATTGTACAGAAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135960.8 |
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| CDS-3UTR CAA 90 bp | GCTTTTGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCATGCGCTTCCATGTGCTGGACTaGATCCTCCCCGACAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: AFALSSDITHVLWHACMRFHVLD*ILPDRN Trigger: GTTCCTGTCGGGGAGGATCAAGTCCAGCACATGGAA...GCGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
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| CDS GCA 90 bp | TCATGCTTCTGCTTCGCAGCCTTTGCCTTCCACTGGTGTAAATGCTaGAATCGAGGCAGTCTCACCATGCAGGTGAGGATCCAACTTAAC | + |
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Preference number: 5 (lower is better) Translates to: SCFCFAAFAFHWCKC*NRGSLTMQVRIQLN Trigger: GTTAAGTTGGATCCTCACCTGCATGGTGAGACTGCCTCGATTGCAGCATTTACACCAGTGGAAGGCAAAGGCTGCGAAGCAGAAGCATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 ENSMUST00000198044.2 |
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| CDS GCA 90 bp | CGAAGAGATTTCACTTTCTTCATGGATGTTGTAGCACAGGATGTCTaGTGCCTGGAGTACAGGGTATGTGAGCAGGCCTACGGTCCCATC | + |
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Preference number: 5 (lower is better) Translates to: RRDFTFFMDVVAQDV*CLEYRVCEQAYGPI Trigger: GATGGGACCGTAGGCCTGCTCACATACCCTGTACTCCAGGCAGCAGACATCCTGTGCTACAACATCCATGAAGAAAGTGAAATCTCTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198044.2 |
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| CDS-3UTR CAA 90 bp | GCAGGCATCTCCAGCATGAATTTGGAAGTGAGGCCATGGGACCCATTTTTGGGGGATGTGAGAATGGACTaGGGCAATGGAAAGAACTCC | + |
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Preference number: 5 (lower is better) Translates to: AGISSMNLEVRPWDPFLGDVRMD*GNGKNS Trigger: GGAGTTCTTTCCATTGCCCAAGTCCATTCTCACATC...CCCCAAAAATGGGTCCCATGGCCTCACTTCCAAATTCATGCTGGAGATGCCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
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| CDS-3UTR CAA 90 bp | TGCCAGTCAGTTTCTCCTTCCACCATGCTGGCCCTGTGGATTGAGCTCCAGCTATCCGATTTTGACATCTaGGAAGAAGGGTCTCGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CQSVSPSTMLALWIELQLSDFDI*EEGSRR Trigger: TCTTCGAGACCCTTCTTCCAAGATGTCAAAATCGGA...TAGCTGGAGCTCAATCCACAGGGCCAGCATGGTGGAAGGAGAAACTGACTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
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| CDS GCA 90 bp | AGAGATTTCACTTTCTTCATGGATGTTGTAGCACAGGATGTCTGCTaGCTGGAGTACAGGGTATGTGAGCAGGCCTACGGTCCCATCATG | + |
|
Preference number: 5 (lower is better) Translates to: RDFTFFMDVVAQDVC*LEYRVCEQAYGPIM Trigger: CATGATGGGACCGTAGGCCTGCTCACATACCCTGTACTCCAGGCAGCAGACATCCTGTGCTACAACATCCATGAAGAAAGTGAAATCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198044.2 |
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| CDS-3UTR CAA 90 bp | CAAGCAAGCACACGCCATGGCTCAGTAATTGTTCACGTTTTCGGGAATACTTCATGGATCGCCACCATGTaGGAAACACCAGCTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QASTRHGSVIVHVFGNTSWIATM*ETPALL Trigger: CAGCAGAGCTGGTGTTTCCAACATGGTGGCGATCCA...TGAAGTATTCCCGAAAACGTGAACAATTACTGAGCCATGGCGTGTGCTTGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
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| CDS-3UTR CAA 90 bp | CCTTGCGGAATTTCTGTACAATCTCCTCTGGGCTGTCTGTTATTCGAACAGTGGTCTGCTTCGCAGCCTTaGCCTTCCACTGGTGTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PCGISVQSPLGCLLFEQWSASQP*PSTGVN Trigger: ATTTACACCAGTGGAAGGCAAAGGCTGCGAAGCAGA...CCACTGTTCGAATAACAGACAGCCCAGAGGAGATTGTACAGAAATTCCGCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135960.8 ENSMUST00000198044.2 |
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| CDS-3UTR CAA 90 bp | CAAGCAAGCACACGCCATGGCTCAGTAATTGTTCACGTTTTCGGGAATACTTCATCTGCTTCGCAGCCTTaGCCTTCCACTGGTGTAAAT | + |
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Preference number: 5 (lower is better) Translates to: QASTRHGSVIVHVFGNTSSASQP*PSTGVN Trigger: ATTTACACCAGTGGAAGGCAAAGGCTGCGAAGCAGA...TGAAGTATTCCCGAAAACGTGAACAATTACTGAGCCATGGCGTGTGCTTGCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 |
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| CDS-3UTR CAA 90 bp | TACAGGTGCATGCTAAAGCCAGAGATATCTGACCCCTTAGTGCTGGCATTTGCAGGAGAGGCCAATTCTTaGGCTTTTGCAGATCCAACA | + |
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Preference number: 5 (lower is better) Translates to: YRCMLKPEISDPLVLAFAGEANS*AFADPT Trigger: TGTTGGATCTGCAAAAGCCAAAGAATTGGCCTCTCC...TGCAAATGCCAGCACTAAGGGGTCAGATATCTCTGGCTTTAGCATGCACCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
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| CDS TCA 90 bp | TGCAATCGAGGCAGTCTCACCATGCAGGTGAGGATCCAACTTAACTaGGTGTGTTCAGACACCTTAGACTGCTGGAAAAGGATACTTTTC | + |
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Preference number: 5 (lower is better) Translates to: CNRGSLTMQVRIQLN*VCSDTLDCWKRILF Trigger: GAAAAGTATCCTTTTCCAGCAGTCTAAGGTGTCTGAACACACTCAGTTAAGTTGGATCCTCACCTGCATGGTGAGACTGCCTCGATTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 |
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| CDS CCA 90 bp | AGTGTGTTCAGACACCTTAGACTGCTGGAAAAGGATACTTTTCTCTaGGTTTATGCCACAGGCAAGAAGCACAGCAGTCATGTCCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: SVFRHLRLLEKDTFL*VYATGKKHSSHVQD Trigger: ATCCTGGACATGACTGCTGTGCTTCTTGCCTGTGGCATAAACCCAGAGAAAAGTATCCTTTTCCAGCAGTCTAAGGTGTCTGAACACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 |
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| CDS-3UTR CAA 90 bp | CGGAATTTCTGTACAATCTCCTCTGGGCTGTCTGTTATTCGAACAGTGGCGAGTTCCGATTTTGACATCTaGGAAGAAGGGTCTCGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RNFCTISSGLSVIRTVASSDFDI*EEGSRR Trigger: TCTTCGAGACCCTTCTTCCAAGATGTCAAAATCGGA...ACTCGCCACTGTTCGAATAACAGACAGCCCAGAGGAGATTGTACAGAAATTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198044.2 |
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| CDS-3UTR CAA 90 bp | GGTAGTCCTGTGCATTTCATTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGTCTGTCACAGCCTaGCGGAATTTCTGTACAATC | + |
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Preference number: 5 (lower is better) Translates to: GSPVHFIVVCVCVCVCVCKSVTA*RNFCTI Trigger: GATTGTACAGAAATTCCGCAAGGCTGTGACAGACTT...ACACACACACACACACACACACACACACACCACAATGAAATGCACAGGACTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
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| CDS-3UTR CAA 90 bp | CTTTTGCACTGTCCTCTGACATCACACATGTTTTGTGGCATGCATGCATGCGCACCAATTCTTTGGCTTTaGCAGATCCAACAAGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLHCPLTSHMFCGMHACAPILWL*QIQQVK Trigger: TTTTACTTGTTGGATCTGCAAAAGCCAAAGAATTGG...TGCGCATGCATGCATGCCACAAAACATGTGTGATGTCAGAGGACAGTGCAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
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| CDS-3UTR CAA 90 bp | GGTTCTCTCCTTTATTTATCACATGGATCTCAGGGATTGAACTCACATAGTCAGTCCCCATACTTTTGGTaGAAACTTCGAGCTAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: GSLLYLSHGSQGLNSHSQSPYFW*KLRARS Trigger: GGATCTAGCTCGAAGTTTCAACCAAAAGTATGGGGA...CTGACTATGTGAGTTCAATCCCTGAGATCCATGTGATAAATAAAGGAGAGAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
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| CDS GCA 72 bp | CTGGGGAGCCAGAGTTGCTGCGGGTCCTTTGTGAAGTaGCCGGATGAAGCGCCAGCACTCACGGGCCTTCCG | + |
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Preference number: 6 (lower is better) Translates to: LGSQSCCGSFVK*PDEAPALTGLP Trigger: CGGAAGGCCCGTGAGTGCTGGCGCTTCATCCGGGCACTTCACAAAGGACCCGCAGCAACTCTGGCTCCCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 ENSMUST00000198044.2 |
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| CDS TCA 72 bp | CCAGAGTTGCTGCGGGTCCTTTGTGAAGTGCCCGGATaGAGCGCCAGCACTCACGGGCCTTCCGCACAGAGA | + |
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Preference number: 6 (lower is better) Translates to: PELLRVLCEVPG*SASTHGPSAQR Trigger: TCTCTGTGCGGAAGGCCCGTGAGTGCTGGCGCTTCATCCGGGCACTTCACAAAGGACCCGCAGCAACTCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 ENSMUST00000198044.2 |
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| CDS GCA 72 bp | TGCCACAGGCAAGAAGCACAGCAGTCATGTCCAGGATaGTCTGCTGGAGGACGGTGGGGTCTTGGGGGACAG | + |
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Preference number: 6 (lower is better) Translates to: CHRQEAQQSCPG*SAGGRWGLGGQ Trigger: CTGTCCCCCAAGACCCCACCGTCCTCCAGCAGAGCATCCTGGACATGACTGCTGTGCTTCTTGCCTGTGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 |
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| CDS CAA 90 bp | CACAGCAGTCATGTCCAGGATGCTCTGCTGGAGGACGGTGGGGTCTaGGGGGACAGTGATGGAGTGGAGGTCCACGATGCTGTATATCAC | + |
|
Preference number: 6 (lower is better) Translates to: HSSHVQDALLEDGGV*GDSDGVEVHDAVYH Trigger: GTGATATACAGCATCGTGGACCTCCACTCCATCACTGTCCCCCAAGACCCCACCGTCCTCCAGCAGAGCATCCTGGACATGACTGCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 |
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| CDS GCA 72 bp | GGGTATGTGAGCAGGCCTACGGTCCCATCATGCTTCTaGTTCGCAGCCTTTGCCTTCCACTGGTGTAAATGC | + |
|
Preference number: 6 (lower is better) Translates to: GYVSRPTVPSCF*FAAFAFHWCKC Trigger: GCATTTACACCAGTGGAAGGCAAAGGCTGCGAAGCAGAAGCATGATGGGACCGTAGGCCTGCTCACATACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 ENSMUST00000198044.2 |
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| CDS GCA 72 bp | AGGAACGTGTGTGGACTTGTAGCACAGGATGTCTGCTaGCTGGAGTACAGGGTATGTGAGCAGGCCTACGGT | + |
|
Preference number: 6 (lower is better) Translates to: RNVCGLVAQDVC*LEYRVCEQAYG Trigger: ACCGTAGGCCTGCTCACATACCCTGTACTCCAGGCAGCAGACATCCTGTGCTACAAGTCCACACACGTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
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| CDS GCA 72 bp | GACAGGAACGTGTGTGGACTTGTAGCACAGGATGTCTaGTGCCTGGAGTACAGGGTATGTGAGCAGGCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: DRNVCGLVAQDV*CLEYRVCEQAY Trigger: GTAGGCCTGCTCACATACCCTGTACTCCAGGCAGCAGACATCCTGTGCTACAAGTCCACACACGTTCCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004343.7 |
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| CDS CAA 72 bp | GGCCTACGGTCCCATCATGCTTCTGCTTCGCAGCCTTaGCCTTCCACTGGTGTAAATGCTGCAATCGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GLRSHHASASQP*PSTGVNAAIEA Trigger: TGCCTCGATTGCAGCATTTACACCAGTGGAAGGCAAAGGCTGCGAAGCAGAAGCATGATGGGACCGTAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 ENSMUST00000198044.2 |
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| CDS TCA 72 bp | GGCAGTCTCACCATGCAGGTGAGGATCCAACTTAACTaGGTGTGTTCAGACACCTGGGGAGCCAGAGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GSLTMQVRIQLN*VCSDTWGARVA Trigger: AGCAACTCTGGCTCCCCAGGTGTCTGAACACACTCAGTTAAGTTGGATCCTCACCTGCATGGTGAGACTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198044.2 |
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| CDS GCA 72 bp | TGCTTCGCAGCCTTTGCCTTCCACTGGTGTAAATGCTaGAATCGAGGCAGTCTCACCATGCAGGTGAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: CFAAFAFHWCKC*NRGSLTMQVRI Trigger: GATCCTCACCTGCATGGTGAGACTGCCTCGATTGCAGCATTTACACCAGTGGAAGGCAAAGGCTGCGAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 ENSMUST00000198044.2 |
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| CDS GCA 72 bp | TTCTGCTTCGCAGCCTTTGCCTTCCACTGGTGTAAATaGTGCAATCGAGGCAGTCTCACCATGCAGGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: FCFAAFAFHWCK*CNRGSLTMQVR Trigger: CCTCACCTGCATGGTGAGACTGCCTCGATTGCAGCATTTACACCAGTGGAAGGCAAAGGCTGCGAAGCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 ENSMUST00000198044.2 |
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| CDS GCA 72 bp | ACTTTCTTCATGGATGTTGTAGCACAGGATGTCTGCTaGCTGGAGTACAGGGTATGTGAGCAGGCCTACGGT | + |
|
Preference number: 6 (lower is better) Translates to: TFFMDVVAQDVC*LEYRVCEQAYG Trigger: ACCGTAGGCCTGCTCACATACCCTGTACTCCAGGCAGCAGACATCCTGTGCTACAACATCCATGAAGAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198044.2 |
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| CDS TCA 72 bp | GGCAGTCTCACCATGCAGGTGAGGATCCAACTTAACTaGGTGTGTTCAGACACCTTAGACTGCTGGAAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSLTMQVRIQLN*VCSDTLDCWKR Trigger: CCTTTTCCAGCAGTCTAAGGTGTCTGAACACACTCAGTTAAGTTGGATCCTCACCTGCATGGTGAGACTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 |
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| CDS GCA 72 bp | TTCACTTTCTTCATGGATGTTGTAGCACAGGATGTCTaGTGCCTGGAGTACAGGGTATGTGAGCAGGCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: FTFFMDVVAQDV*CLEYRVCEQAY Trigger: GTAGGCCTGCTCACATACCCTGTACTCCAGGCAGCAGACATCCTGTGCTACAACATCCATGAAGAAAGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198044.2 |
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| CDS TCA 72 bp | GTAAATGCTGCAATCGAGGCAGTCTCACCATGCAGGTaGGGATCCAACTTAACTGAGTGTGTTCAGACACCT | + |
|
Preference number: 6 (lower is better) Translates to: VNAAIEAVSPCR*GSNLTECVQTP Trigger: AGGTGTCTGAACACACTCAGTTAAGTTGGATCCTCACCTGCATGGTGAGACTGCCTCGATTGCAGCATTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 ENSMUST00000198044.2 |
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| CDS CCA 72 bp | AGACACCTTAGACTGCTGGAAAAGGATACTTTTCTCTaGGTTTATGCCACAGGCAAGAAGCACAGCAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: RHLRLLEKDTFL*VYATGKKHSSH Trigger: ATGACTGCTGTGCTTCTTGCCTGTGGCATAAACCCAGAGAAAAGTATCCTTTTCCAGCAGTCTAAGGTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004343.7 ENSMUST00000135960.8 ENSMUST00000145650.8 |
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