RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for WAC (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024283

Ensembl transcript IDs: ENSMUST00000074919.11, ENSMUST00000092112.11, ENSMUST00000165854.8, ENSMUST00000166062.8, ENSMUST00000167020.8, ENSMUST00000167542.2, ENSMUST00000168446.8, ENSMUST00000169010.8, ENSMUST00000170854.2, ENSMUST00000171042.8, ENSMUST00000171486.8, ENSMUST00000172018.8

Found 370 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTTCCCCTCCCACAACCATGTTCATTGGGCCACTTCCTTGTATTTaGGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCT +
Preference number: 1 (lower is better)
Translates to: LSPPTTMFIGPLPCI*AVNVLSAHLPSSTS
Trigger: AGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATACAAGGAAGTGGCCCAATGAACATGGTTGTGGGAGGGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
3UTR TCA 90 bp GCTGACAACAGAAATAACTTATGCAACTCACAAGTCAGCTTCTCATaGCCAGGAAATGGTGTCTTCTTACAGTACAAACCTGTAGCCCTT +
Preference number: 1 (lower is better)
Translates to: ADNRNNLCNSQVSFS*PGNGVFLQYKPVAL
Trigger: AAGGGCTACAGGTTTGTACTGTAAGAAGACACCATTTCCTGGTCATGAGAAGCTGACTTGTGAGTTGCATAAGTTATTTCTGTTGTCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167020.8
3UTR GCA 90 bp AAGCACTTGAGAGTAACAAGGGGAAGTCAACTCCCTATAAGCCTGTaGTTCAGCAAACACCAATACTATCTTTTCAGATTTATTAAACTT +
Preference number: 1 (lower is better)
Translates to: KHLRVTRGSQLPISL*FSKHQYYLFRFIKL
Trigger: AAGTTTAATAAATCTGAAAAGATAGTATTGGTGTTTGCTGAAGCACAGGCTTATAGGGAGTTGACTTCCCCTTGTTACTCTCAAGTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000167020.8
3UTR CCA 90 bp TTTCTATTTTCAAATTCCTTAAACTTGGTTACCTGTTCAGATTCATaGCACCTAAAGATAACCCAGGATACTGAGCCTGCTCTAACAGAT +
Preference number: 1 (lower is better)
Translates to: FLFSNSLNLVTCSDS*HLKITQDTEPALTD
Trigger: ATCTGTTAGAGCAGGCTCAGTATCCTGGGTTATCTTTAGGTGCCATGAATCTGAACAGGTAACCAAGTTTAAGGAATTTGAAAATAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167020.8
3UTR TCA 90 bp CACATGGCTTCCCATGGCTTCACTCTACAAAACATATTTACAACGTaGAGATACATCTACAAGAAATCTACATTTCAAGGGTTTTACAAA +
Preference number: 1 (lower is better)
Translates to: HMASHGFTLQNIFTT*RYIYKKSTFQGFYK
Trigger: TTTGTAAAACCCTTGAAATGTAGATTTCTTGTAGATGTATCTTCACGTTGTAAATATGTTTTGTAGAGTGAAGCCATGGGAAGCCATGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
3UTR-3UTR CCA 90 bp AGCAGCACTGCTCTTGATCAGGTGCAAGTGCTGATCAGTTGTCTCATGATATTTAAGCTCTGTTACACATaGCTTCCCATGGCTTCACTC +
Preference number: 2 (lower is better)
Translates to: SSTALDQVQVLISCLMIFKLCYT*LPMASL
Trigger: GAGTGAAGCCATGGGAAGCCATGTGTAACAGAGCTT...AAATATCATGAGACAACTGATCAGCACTTGCACCTGATCAAGAGCAGTGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
3UTR-3UTR CCA 90 bp TATTTGTACACTGCTCATAAGGTTCAAAATCGTATCCTCAGACACAGATCACCTAAGCTCTGTTACACATaGCTTCCCATGGCTTCACTC +
Preference number: 2 (lower is better)
Translates to: YLYTAHKVQNRILRHRSPKLCYT*LPMASL
Trigger: GAGTGAAGCCATGGGAAGCCATGTGTAACAGAGCTT...AGGTGATCTGTGTCTGAGGATACGATTTTGAACCTTATGAGCAGTGTACAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
3UTR-3UTR CCA 90 bp GAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGTCCATTACCTGGCGCTTGCACTaGATTTTTGAAAATGCAAGA +
Preference number: 2 (lower is better)
Translates to: EQLMYFQHTCPAVLLKSITWRLH*IFENAR
Trigger: TCTTGCATTTTCAAAAATCCAGTGCAAGCGCCAGGT...AATGGACTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
3UTR-3UTR CCA 90 bp GTATTTGAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGACCTGGCGCTTGCACTaGATTTTTGAAAATGCAAGA +
Preference number: 2 (lower is better)
Translates to: VFEQLMYFQHTCPAVLLKTWRLH*IFENAR
Trigger: TCTTGCATTTTCAAAAATCCAGTGCAAGCGCCAGGT...CTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
3UTR-3UTR CCA 90 bp AGTGCTGATCAGTTGTCTCATGATATTTGTACACTGCTCATAAGGTTCAAAATCCAGACACAGATCACCTaGCGCTTGCACTGGATTTTT +
Preference number: 2 (lower is better)
Translates to: SADQLSHDICTLLIRFKIQTQIT*RLHWIF
Trigger: AAAAATCCAGTGCAAGCGCCAGGTGATCTGTGTCTG...GATTTTGAACCTTATGAGCAGTGTACAAATATCATGAGACAACTGATCAGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
3UTR-3UTR TCA 90 bp GATCTAGAAGAAAACATCTGCCCCAACAATGCAATTCTTAAGTCAGATGTTACACCACTTCCTTGTATTTaGGCAGTTAATGTACTTTCA +
Preference number: 2 (lower is better)
Translates to: DLEENICPNNAILKSDVTPLPCI*AVNVLS
Trigger: TGAAAGTACATTAACTGCTCAAATACAAGGAAGTGG...TGTAACATCTGACTTAAGAATTGCATTGTTGGGGCAGATGTTTTCTTCTAGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000167020.8
3UTR-3UTR CCA 90 bp GATCTAGAAGAAAACATCTGCCCCAACAATGCAATTCTTAAGTCAGATGTTACAGATTTAGTACAATGCTaGAAGTGTCATGTTAAGGTC +
Preference number: 2 (lower is better)
Translates to: DLEENICPNNAILKSDVTDLVQC*KCHVKV
Trigger: GACCTTAACATGACACTTCCAGCATTGTACTAAATC...TGTAACATCTGACTTAAGAATTGCATTGTTGGGGCAGATGTTTTCTTCTAGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000167020.8
3UTR-3UTR CAA 90 bp GCTCTTGATCAGGTGCAAGTGCTGATCAGTTGTCTCATGATATTTGTACACTGCACAGACCCCGTCCCCTaGTCATTTCATTTGCCCAGC +
Preference number: 3 (lower is better)
Translates to: ALDQVQVLISCLMIFVHCTDPVP*SFHLPS
Trigger: GCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGT...GCAGTGTACAAATATCATGAGACAACTGATCAGCACTTGCACCTGATCAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
3UTR-3UTR CAA 90 bp TGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATGAAACAGACCCCGTCCCCTaGTCATTTCATTTGCCCAGC +
Preference number: 3 (lower is better)
Translates to: WIKSGQGTSEGMEHTGNETDPVP*SFHLPS
Trigger: GCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGT...TTCATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
3UTR TCA 72 bp CCCACAACCATGTTCATTGGGCCACTTCCTTGTATTTaGGCAGTTAATGTACTTTCAGCACACTTGCCCAGC +
Preference number: 3 (lower is better)
Translates to: PTTMFIGPLPCI*AVNVLSAHLPS
Trigger: GCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATACAAGGAAGTGGCCCAATGAACATGGTTGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
3UTR-3UTR CAA 90 bp AATTTATACAAACGTGGGTTATGCTTGCTCACTGCGACTTCCAGCTACTGTACATATCTTTCCCCTGAATaGACTCTCACAGACCCCGTC +
Preference number: 3 (lower is better)
Translates to: NLYKRGLCLLTATSSYCTYLSPE*TLTDPV
Trigger: GACGGGGTCTGTGAGAGTCAATTCAGGGGAAAGATA...TGTACAGTAGCTGGAAGTCGCAGTGAGCAAGCATAACCCACGTTTGTATAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
3UTR-3UTR CAA 90 bp AGTGCTGATCAGTTGTCTCATGATATTTGTACACTGCTCATAAGGTTCAAAATCACAGACCCCGTCCCCTaGTCATTTCATTTGCCCAGC +
Preference number: 3 (lower is better)
Translates to: SADQLSHDICTLLIRFKITDPVP*SFHLPS
Trigger: GCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGT...GATTTTGAACCTTATGAGCAGTGTACAAATATCATGAGACAACTGATCAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
3UTR-3UTR CAA 90 bp AATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATGAAAACATATTATCTTTCCCCTGAATaGACTCTCACAGACCCCGTC +
Preference number: 3 (lower is better)
Translates to: NQAKGLQREWNIQEMKTYYLSPE*TLTDPV
Trigger: GACGGGGTCTGTGAGAGTCAATTCAGGGGAAAGATA...ATATGTTTTCATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
3UTR TCA 72 bp TTCAGATTCATGGCACCTAAAGATAACCCAGGATACTaGGCCTGCTCTAACAGATATGCCTCAGTCACTTCA +
Preference number: 3 (lower is better)
Translates to: FRFMAPKDNPGY*ACSNRYASVTS
Trigger: TGAAGTGACTGAGGCATATCTGTTAGAGCAGGCTCAGTATCCTGGGTTATCTTTAGGTGCCATGAATCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167020.8
3UTR CCA 72 bp ATGCAACTCACAAGTCAGCTTCTCATGACCAGGAAATaGTGTCTTCTTACAGTACAAACCTGTAGCCCTTTG +
Preference number: 3 (lower is better)
Translates to: MQLTSQLLMTRK*CLLTVQTCSPL
Trigger: CAAAGGGCTACAGGTTTGTACTGTAAGAAGACACCATTTCCTGGTCATGAGAAGCTGACTTGTGAGTTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167020.8
3UTR-3UTR CAA 90 bp GTATTTGAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGCCCTTGTCATTTCATTaGCCCAGCTTAACGGTCCAT +
Preference number: 3 (lower is better)
Translates to: VFEQLMYFQHTCPAVLLKPLSFH*PSLTVH
Trigger: ATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGG...CTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
3UTR-3UTR CAA 90 bp GCTGATCAGTTGTCTCATGATATTTGTACACTGCTCATAAGGTTCAAAATCGTACCCTTGTCATTTCATTaGCCCAGCTTAACGGTCCAT +
Preference number: 3 (lower is better)
Translates to: ADQLSHDICTLLIRFKIVPLSFH*PSLTVH
Trigger: ATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGG...TACGATTTTGAACCTTATGAGCAGTGTACAAATATCATGAGACAACTGATCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
3UTR-3UTR CAA 90 bp GTATTTGAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGTTAGCCACCTCAGCATaGATTAGTTTCAGATGTCTA +
Preference number: 3 (lower is better)
Translates to: VFEQLMYFQHTCPAVLLKLATSA*ISFRCL
Trigger: TAGACATCTGAAACTAATCAATGCTGAGGTGGCTAA...CTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
3UTR-3UTR CAA 90 bp GCTGATCAGTTGTCTCATGATATTTGTACACTGCTCATAAGGTTCAAAATCGTACAGATCACCTGGCGCTaGCACTGGATTTTTGAAAAT +
Preference number: 3 (lower is better)
Translates to: ADQLSHDICTLLIRFKIVQITWR*HWIFEN
Trigger: ATTTTCAAAAATCCAGTGCAAGCGCCAGGTGATCTG...TACGATTTTGAACCTTATGAGCAGTGTACAAATATCATGAGACAACTGATCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
3UTR TCA 72 bp GATGTCCCATGTTTCTGGGTACAGCAAGTAACTCAATaGCACAAACTGTTTTGTGATGTTAGGAACAACAGT +
Preference number: 3 (lower is better)
Translates to: DVPCFWVQQVTQ*HKLFCDVRNNS
Trigger: ACTGTTGTTCCTAACATCACAAAACAGTTTGTGTCATTGAGTTACTTGCTGTACCCAGAAACATGGGACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092112.11
ENSMUST00000167020.8
3UTR GCA 72 bp AGAGTAACAAGGGGAAGTCAACTCCCTATAAGCCTGTaGTTCAGCAAACACCAATACTATCTTTTCAGATTT +
Preference number: 3 (lower is better)
Translates to: RVTRGSQLPISL*FSKHQYYLFRF
Trigger: AAATCTGAAAAGATAGTATTGGTGTTTGCTGAAGCACAGGCTTATAGGGAGTTGACTTCCCCTTGTTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000167020.8
3UTR TCA 72 bp AGAAATAACTTATGCAACTCACAAGTCAGCTTCTCATaGCCAGGAAATGGTGTCTTCTTACAGTACAAACCT +
Preference number: 3 (lower is better)
Translates to: RNNLCNSQVSFS*PGNGVFLQYKP
Trigger: AGGTTTGTACTGTAAGAAGACACCATTTCCTGGTCATGAGAAGCTGACTTGTGAGTTGCATAAGTTATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167020.8
3UTR TCA 72 bp GTGAGTAAATGGTCTTTCCTGCATGTTCTTCTTCTTTaGAGAATTCCCTTAGAGCTACGGTATTTATACAGA +
Preference number: 3 (lower is better)
Translates to: VSKWSFLHVLLL*RIPLELRYLYR
Trigger: TCTGTATAAATACCGTAGCTCTAAGGGAATTCTTCAAAGAAGAAGAACATGCAGGAAAGACCATTTACTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000167020.8
3UTR GCA 72 bp CATCTCTTGGTGATTGTAGATCTAGAAGAAAACATCTaGCCCAACAATGCAATTCTTAAGTCAGATGTTACA +
Preference number: 3 (lower is better)
Translates to: HLLVIVDLEENI*PNNAILKSDVT
Trigger: TGTAACATCTGACTTAAGAATTGCATTGTTGGGGCAGATGTTTTCTTCTAGATCTACAATCACCAAGAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000167020.8
3UTR TCA 72 bp TCCCATGGCTTCACTCTACAAAACATATTTACAACGTaGAGATACATCTACAAGAAATCTACATTTCAAGGG +
Preference number: 3 (lower is better)
Translates to: SHGFTLQNIFTT*RYIYKKSTFQG
Trigger: CCCTTGAAATGTAGATTTCTTGTAGATGTATCTTCACGTTGTAAATATGTTTTGTAGAGTGAAGCCATGGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp GACTCTCACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCAGGCGTAGAGCTACTGTaGGTCTCTGCTCTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: DSHRPRPLVISFAQLNGPGVELL*VSALGS
Trigger: ACTGCCAAGAGCAGAGACTCACAGTAGCTCTACGCC...TGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGTGAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp GACTCTCACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCACTTGTGGAGAGTAACTaGTCCCACCGTCCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: DSHRPRPLVISFAQLNGPLVESN*SHRPFL
Trigger: GAGAAAGGGACGGTGGGACCAGTTACTCTCCACAAG...TGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGTGAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp GACTCTCACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCAGTGGGAGCAAACTACTaGCATCGCTGGAATGCTTGT +
Preference number: 4 (lower is better)
Translates to: DSHRPRPLVISFAQLNGPVGANY*HRWNAC
Trigger: ACAAGCATTCCAGCGATGCCAGTAGTTTGCTCCCAC...TGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGTGAGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp GACTCTCACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATTCTTCACGCAATCTTaGTGCCTGTTTCTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: DSHRPRPLVISFAQLNGPFFTQS*CLFLCV
Trigger: CACGCAGAGAAACAGGCATCAAGATTGCGTGAAGAA...TGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGTGAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp GACTCTCACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCACGCAGGTCTAGCAGATaGATTCTGTGGTACAACAGT +
Preference number: 4 (lower is better)
Translates to: DSHRPRPLVISFAQLNGPRRSSR*ILWYNS
Trigger: ACTGTTGTACCACAGAATGCATCTGCTAGACCTGCG...TGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGTGAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp AGCAGCACTGCTCTTGATCAGGTGCAAGTGCTGATCAGTTGTCTCATGATATTTGGGGTAGCGGTTGGATaGACCACTGGTTTGATGGGG +
Preference number: 4 (lower is better)
Translates to: SSTALDQVQVLISCLMIFGVAVG*TTGLMG
Trigger: CCCCATCAAACCAGTGGTTCATCCAACCGCTACCCC...AAATATCATGAGACAACTGATCAGCACTTGCACCTGATCAAGAGCAGTGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp ACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTAAGCTGTAGCGTGGCTTaGAAAGCAGGAAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: TDPVPLSFHLPSLTVHSLSCSVA*KAGSNC
Trigger: ACAGTTGCTTCCTGCTTTGCAAGCCACGCTACAGCT...TAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp GTGGGTTATGCTTGCTCACTGCGACTTCCAGCTACTGTACATAGGAATGACAAGGGATCATGGCTCTGCTaGTTGTCAGCAGTTACAGGC +
Preference number: 4 (lower is better)
Translates to: VGYACSLRLPATVHRNDKGSWLC*LSAVTG
Trigger: GCCTGTAACTGCTGACAAGCAGCAGAGCCATGATCC...CTTGTCATTCCTATGTACAGTAGCTGGAAGTCGCAGTGAGCAAGCATAACCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp GTGGGTTATGCTTGCTCACTGCGACTTCCAGCTACTGTACATAGGAATGACAAGGATGGGGTGCTGTACTaGCGTAGAGCTACTGTGAGT +
Preference number: 4 (lower is better)
Translates to: VGYACSLRLPATVHRNDKDGVLY*RRATVS
Trigger: ACTCACAGTAGCTCTACGCCAGTACAGCACCCCATC...CTTGTCATTCCTATGTACAGTAGCTGGAAGTCGCAGTGAGCAAGCATAACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp ACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTAGGTTGGATGAACCACTaGTTTGATGGGGTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: TDPVPLSFHLPSLTVHSLGWMNH*FDGVLY
Trigger: GTACAGCACCCCATCAAACCAGTGGTTCATCCAACC...TAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp ACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTAAGAGACATTGGAGACTaGTTAGATGGCTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: TDPVPLSFHLPSLTVHSLRDIGD*LDGWAC
Trigger: ACAAGCCCAGCCATCTAATCAGTCTCCAATGTCTCT...TAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp GACTCTCACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCAGGGACTGTATTAGTTTaGGGTGTGCTTATTCTTGGA +
Preference number: 4 (lower is better)
Translates to: DSHRPRPLVISFAQLNGPGTVLV*GVLILG
Trigger: TCCAAGAATAAGCACACCTCAAACTAATACAGTCCC...TGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGTGAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp ACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTATGGCTACTTAAGCGCTaGAGACTTCGAGGAGAAACA +
Preference number: 4 (lower is better)
Translates to: TDPVPLSFHLPSLTVHSLWLLKR*RLRGET
Trigger: TGTTTCTCCTCGAAGTCTTCAGCGCTTAAGTAGCCA...TAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp ACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATGGCTTCCCAGGGGTAGCGGTTGGATaGACCACTGGTTTGATGGGG +
Preference number: 4 (lower is better)
Translates to: TSALISFRCLSSVTHGFPGVAVG*TTGLMG
Trigger: CCCCATCAAACCAGTGGTTCATCCAACCGCTACCCC...TGGGAAGCCATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp GACTCTCACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCACTGCTCTCGCAAAGTTaGTTGAATTTCACATACTCG +
Preference number: 4 (lower is better)
Translates to: DSHRPRPLVISFAQLNGPLLSQS*LNFTYS
Trigger: CGAGTATGTGAAATTCAAGCAACTTTGCGAGAGCAG...TGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGTGAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp GACTCTCACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCAGCAGTAAGAAACTTGTaGATGATAGACTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: DSHRPRPLVISFAQLNGPAVRNL*MIDCRE
Trigger: TTCCCTGCAGTCTATCATCCACAAGTTTCTTACTGC...TGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGTGAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp GACTCTCACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCAAGGTGTGCTTATTCTTaGAGACACATAGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: DSHRPRPLVISFAQLNGPRCAYS*RHIGSW
Trigger: CCAAGATCCTATGTGTCTCCAAGAATAAGCACACCT...TGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGTGAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp ACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTATTTTTGGCCTTGTTGTaGCCTGTGCTGTCACTGTAT +
Preference number: 4 (lower is better)
Translates to: TDPVPLSFHLPSLTVHSLFLALL*PVLSLY
Trigger: ATACAGTGACAGCACAGGTCACAACAAGGCCAAAAA...TAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp ACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTATCTGCAGGCCACCCTTaGACATGCTTTATGAGATTA +
Preference number: 4 (lower is better)
Translates to: TDPVPLSFHLPSLTVHSLSAGHP*TCFMRL
Trigger: TAATCTCATAAAGCATGTTCAAGGGTGGCCTGCAGA...TAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp AACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGTGGGCGTAGAGCTACTGTaGGTCTCTGCTCTTGGCAGT +
Preference number: 4 (lower is better)
Translates to: NISLQNKWSSTALDQVQVGVELL*VSALGS
Trigger: ACTGCCAAGAGCAGAGACTCACAGTAGCTCTACGCC...CACTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp CACTTCCTTGTATTTGAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTAGATGAACCACTGGTTTaGTGGGGTGCTGTACTGGCG +
Preference number: 4 (lower is better)
Translates to: HFLVFEQLMYFQHTCPAVDEPLV*WGAVLA
Trigger: CGCCAGTACAGCACCCCATCAAACCAGTGGTTCATC...TACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATACAAGGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp GTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCGGATCATGGCTCTGCTaGTTGTCAGCAGTTACAGGC +
Preference number: 4 (lower is better)
Translates to: VPLSFHLPSLTVHSLLKCGSWLC*LSAVTG
Trigger: GCCTGTAACTGCTGACAAGCAGCAGAGCCATGATCC...GCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp ACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTAGTACTAACCTTTGGCTaGGATGAAACAGGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: TDPVPLSFHLPSLTVHSLVLTFG*DETGGV
Trigger: TACTCCACCTGTTTCATCCCAGCCAAAGGTTAGTAC...TAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp GACTCTCACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCAACACTTCCCATATTATaGGCTTCTTCACGCAATCTT +
Preference number: 4 (lower is better)
Translates to: DSHRPRPLVISFAQLNGPTLPIL*ASSRNL
Trigger: AAGATTGCGTGAAGAAGCCCATAATATGGGAAGTGT...TGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGTGAGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp AATTTATACAAACGTGGGTTATGCTTGCTCACTGCGACTTCCAGCTACTGTACACATTTTGTTTGGTGGTaGAGGATCTGCGGCGTCTCG +
Preference number: 4 (lower is better)
Translates to: NLYKRGLCLLTATSSYCTHFVWW*RICGVS
Trigger: CGAGACGCCGCAGATCCTTCACCACCAAACAAAATG...TGTACAGTAGCTGGAAGTCGCAGTGAGCAAGCATAACCCACGTTTGTATAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp AATTTATACAAACGTGGGTTATGCTTGCTCACTGCGACTTCCAGCTACTGTACAGTTCAGGCCAGAGGCTaGAGATGTGGAAGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: NLYKRGLCLLTATSSYCTVQARG*RCGRSC
Trigger: ACAACTCCTTCCACATCTTCAGCCTCTGGCCTGAAC...TGTACAGTAGCTGGAAGTCGCAGTGAGCAAGCATAACCCACGTTTGTATAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp AACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGTGGTTCAGGCCAGAGGCTaGAGATGTGGAAGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: NISLQNKWSSTALDQVQVVQARG*RCGRSC
Trigger: ACAACTCCTTCCACATCTTCAGCCTCTGGCCTGAAC...CACTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp ACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATGGCTTCCCAGTTCAGGCCAGAGGCTaGAGATGTGGAAGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: TSALISFRCLSSVTHGFPVQARG*RCGRSC
Trigger: ACAACTCCTTCCACATCTTCAGCCTCTGGCCTGAAC...TGGGAAGCCATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp GTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCCTGTGTAGCCGAATGTaGCACTGGTCCTTGCTTAAC +
Preference number: 4 (lower is better)
Translates to: VPLSFHLPSLTVHSLLKCLCSRM*HWSLLN
Trigger: GTTAAGCAAGGACCAGTGTCACATTCGGCTACACAG...GCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp GTGGGTTATGCTTGCTCACTGCGACTTCCAGCTACTGTACATAGGAATGACAAGTCTGCAGGCCACCCTTaGACATGCTTTATGAGATTA +
Preference number: 4 (lower is better)
Translates to: VGYACSLRLPATVHRNDKSAGHP*TCFMRL
Trigger: TAATCTCATAAAGCATGTTCAAGGGTGGCCTGCAGA...CTTGTCATTCCTATGTACAGTAGCTGGAAGTCGCAGTGAGCAAGCATAACCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp AATAATTTATACAAACGTGGGTTATGCTTGCTCACTGCGACTTCCAGCTACTGTGATGAACCACTGGTTTaGTGGGGTGCTGTACTGGCG +
Preference number: 4 (lower is better)
Translates to: NNLYKRGLCLLTATSSYCDEPLV*WGAVLA
Trigger: CGCCAGTACAGCACCCCATCAAACCAGTGGTTCATC...ACAGTAGCTGGAAGTCGCAGTGAGCAAGCATAACCCACGTTTGTATAAATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp GACTCTCACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCAAACTGCCAGCTTATTTaGTTCTTTTTGTCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: DSHRPRPLVISFAQLNGPNCQLI*FFLSLF
Trigger: GAACAGAGACAAAAAGAAGCAAATAAGCTGGCAGTT...TGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGTGAGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp GTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCCCCACTAGTGGCTGTTaGTTGCATCACCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VPLSFHLPSLTVHSLLKCPTSGC*LHHLSS
Trigger: AGAAGAGAGGTGATGCAAGCAACAGCCACTAGTGGG...GCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp GTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCTCAGCAGTTACAGGCTaGTGTGTAGCCGAATGTGAC +
Preference number: 4 (lower is better)
Translates to: VPLSFHLPSLTVHSLLKCSAVTG*CVAECD
Trigger: GTCACATTCGGCTACACAGCAGCCTGTAACTGCTGA...GCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp AACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGTGGGATCATGGCTCTGCTaGTTGTCAGCAGTTACAGGC +
Preference number: 4 (lower is better)
Translates to: NISLQNKWSSTALDQVQVGSWLC*LSAVTG
Trigger: GCCTGTAACTGCTGACAAGCAGCAGAGCCATGATCC...CACTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp GTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCTCTCTCTGTTTTCTGTaGAGGGAGAGAAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: VPLSFHLPSLTVHSLLKCSLCFL*RERSCG
Trigger: CCCACAGCTTCTCTCCCTGCACAGAAAACAGAGAGA...GCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp AGCAGCACTGCTCTTGATCAGGTGCAAGTGCTGATCAGTTGTCTCATGATATTTTCTCTCTGTTTTCTGTaGAGGGAGAGAAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SSTALDQVQVLISCLMIFSLCFL*RERSCG
Trigger: CCCACAGCTTCTCTCCCTGCACAGAAAACAGAGAGA...AAATATCATGAGACAACTGATCAGCACTTGCACCTGATCAAGAGCAGTGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp ACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTAAGATGTCAGAGACATTaGAGACTGATTAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: TDPVPLSFHLPSLTVHSLRCQRH*RLIRWL
Trigger: CAGCCATCTAATCAGTCTCCAATGTCTCTGACATCT...TAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp ACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTAAGGTGTGCTTATTCTTaGAGACACATAGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: TDPVPLSFHLPSLTVHSLRCAYS*RHIGSW
Trigger: CCAAGATCCTATGTGTCTCCAAGAATAAGCACACCT...TAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp GTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGAAGGAACAGTGCTTaGGGTAGCGGTTGGATGAAC +
Preference number: 4 (lower is better)
Translates to: VPLSFHLPSLTVHSLLKCRRNSA*GSGWMN
Trigger: GTTCATCCAACCGCTACCCCAAGCACTGTTCCTTCT...GCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
3UTR CAA 72 bp TTGACTCTCACAGACCCCGTCCCCTTGTCATTTCATTaGCCCAGCTTAACGGTCCATAGTCTACTTAAATGC +
Preference number: 4 (lower is better)
Translates to: LTLTDPVPLSFH*PSLTVHSLLKC
Trigger: GCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGTGAGAGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp AAAACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGCATTTTGTTTGGTGGTaGAGGATCTGCGGCGTCTCG +
Preference number: 4 (lower is better)
Translates to: KTYLCKTNGAALLLIRCKHFVWW*RICGVS
Trigger: CGAGACGCCGCAGATCCTTCACCACCAAACAAAATG...CTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp GTATTTGAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGCATTTTGTTTGGTGGTaGAGGATCTGCGGCGTCTCG +
Preference number: 4 (lower is better)
Translates to: VFEQLMYFQHTCPAVLLKHFVWW*RICGVS
Trigger: CGAGACGCCGCAGATCCTTCACCACCAAACAAAATG...CTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp ACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTATGTGAATTTGAACTATaGAGTGCACTGTGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: TDPVPLSFHLPSLTVHSLCEFEL*SALWLC
Trigger: ACACAACCACAGTGCACTTCATAGTTCAAATTCACA...TAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp TTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGCTCAAAATGTTATGACGTTCAGGCCAGAGGCTaGAGATGTGGAAGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: LPSLTVHSLLKCSSKCYDVQARG*RCGRSC
Trigger: ACAACTCCTTCCACATCTTCAGCCTCTGGCCTGAAC...GTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp AACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGTGGAAAGCTGGGCAGCTTaGGAAATCAGTGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: NISLQNKWSSTALDQVQVESWAA*EISEVM
Trigger: CATCACCTCACTGATTTCTCAAGCTGCCCAGCTTTC...CACTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp ACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATGGCTTCCCAGAAAGCTGGGCAGCTTaGGAAATCAGTGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: TSALISFRCLSSVTHGFPESWAA*EISEVM
Trigger: CATCACCTCACTGATTTCTCAAGCTGCCCAGCTTTC...TGGGAAGCCATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp GTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGAGACATTGGAGACTaGTTAGATGGCTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: VPLSFHLPSLTVHSLLKCRDIGD*LDGWAC
Trigger: ACAAGCCCAGCCATCTAATCAGTCTCCAATGTCTCT...GCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp GAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGTCCATTCTGTGTAGCCGAATGTaGCACTGGTCCTTGCTTAAC +
Preference number: 4 (lower is better)
Translates to: EQLMYFQHTCPAVLLKSILCSRM*HWSLLN
Trigger: GTTAAGCAAGGACCAGTGTCACATTCGGCTACACAG...AATGGACTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp ACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTATTACTACTACAAGTATaGTTTGGACCAGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: TDPVPLSFHLPSLTVHSLLLLQV*FGPGDG
Trigger: TCCATCACCTGGTCCAAATCATACTTGTAGTAGTAA...TAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp ACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTATCTCGCAAAGTTGCTTaGATTTCACATACTCGAACT +
Preference number: 4 (lower is better)
Translates to: TDPVPLSFHLPSLTVHSLSRKVA*ISHTRT
Trigger: AGTTCGAGTATGTGAAATTCAAGCAACTTTGCGAGA...TAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp ACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTACCTTGTTGTGACCTGTaGTGTCACTGTATTTGTTTT +
Preference number: 4 (lower is better)
Translates to: TDPVPLSFHLPSLTVHSLPCCDL*CHCICF
Trigger: AAAACAAATACAGTGACAGCACAGGTCACAACAAGG...TAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp TGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATGAACCCACTAGTGGCTGTTaGTTGCATCACCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: WIKSGQGTSEGMEHTGNEPTSGC*LHHLSS
Trigger: AGAAGAGAGGTGATGCAAGCAACAGCCACTAGTGGG...TTCATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp GACTCTCACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCAATGTGGAAGGAGTTGTaGAAGAATGTGATATTGATT +
Preference number: 4 (lower is better)
Translates to: DSHRPRPLVISFAQLNGPMWKEL*KNVILI
Trigger: AATCAATATCACATTCTTGCACAACTCCTTCCACAT...TGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGTGAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp ACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATGGCTTCCCAAGCTGTAGCGTGGCTTaGAAAGCAGGAAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: TSALISFRCLSSVTHGFPSCSVA*KAGSNC
Trigger: ACAGTTGCTTCCTGCTTTGCAAGCCACGCTACAGCT...TGGGAAGCCATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp CCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGCTCAAAATGTTATGACTGGTCAGCAGTTACAGGCTaGTGTGTAGCCGAATGTGAC +
Preference number: 4 (lower is better)
Translates to: PSLTVHSLLKCSSKCYDWSAVTG*CVAECD
Trigger: GTCACATTCGGCTACACAGCAGCCTGTAACTGCTGA...CCAGTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTTAAGCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp GTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCACAGGATCATGGCTCTaGTGCTTGTCAGCAGTTACA +
Preference number: 4 (lower is better)
Translates to: VPLSFHLPSLTVHSLLKCTGSWL*CLSAVT
Trigger: TGTAACTGCTGACAAGCAGCAGAGCCATGATCCTGT...GCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp GTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCCGCAGGTCTAGCAGATaGATTCTGTGGTACAACAGT +
Preference number: 4 (lower is better)
Translates to: VPLSFHLPSLTVHSLLKCRRSSR*ILWYNS
Trigger: ACTGTTGTACCACAGAATGCATCTGCTAGACCTGCG...GCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp GAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGTCCATTGAGTGTGCACGTTTTTaGCCTTGTTGTGACCTGTGC +
Preference number: 4 (lower is better)
Translates to: EQLMYFQHTCPAVLLKSIECARF*PCCDLC
Trigger: GCACAGGTCACAACAAGGCCAAAAACGTGCACACTC...AATGGACTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp AATTTATACAAACGTGGGTTATGCTTGCTCACTGCGACTTCCAGCTACTGTACAGAGTGTGCACGTTTTTaGCCTTGTTGTGACCTGTGC +
Preference number: 4 (lower is better)
Translates to: NLYKRGLCLLTATSSYCTECARF*PCCDLC
Trigger: GCACAGGTCACAACAAGGCCAAAAACGTGCACACTC...TGTACAGTAGCTGGAAGTCGCAGTGAGCAAGCATAACCCACGTTTGTATAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp AAAACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGCTTGTGGAGAGTAACTaGTCCCACCGTCCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: KTYLCKTNGAALLLIRCKLVESN*SHRPFL
Trigger: GAGAAAGGGACGGTGGGACCAGTTACTCTCCACAAG...CTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp AAAATGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAACTTGTGGAGAGTAACTaGTCCCACCGTCCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: KMDKIRPRDFRGNGTYRKLVESN*SHRPFL
Trigger: GAGAAAGGGACGGTGGGACCAGTTACTCTCCACAAG...TTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp ACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATGGCTTCCCAGGAGAAACAGGATCATaGCTCTGCTGCTTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: TSALISFRCLSSVTHGFPGETGS*LCCLSA
Trigger: TGCTGACAAGCAGCAGAGCCATGATCCTGTTTCTCC...TGGGAAGCCATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp GAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGTCCATTGGTTGGATGAACCACTaGTTTGATGGGGTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: EQLMYFQHTCPAVLLKSIGWMNH*FDGVLY
Trigger: GTACAGCACCCCATCAAACCAGTGGTTCATCCAACC...AATGGACTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp GTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCTTTTTGGCCTTGTTGTaGCCTGTGCTGTCACTGTAT +
Preference number: 4 (lower is better)
Translates to: VPLSFHLPSLTVHSLLKCFLALL*PVLSLY
Trigger: ATACAGTGACAGCACAGGTCACAACAAGGCCAAAAA...GCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp GTGGGTTATGCTTGCTCACTGCGACTTCCAGCTACTGTACATAGGAATGACAAGTGTGAATTTGAACTATaGAGTGCACTGTGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: VGYACSLRLPATVHRNDKCEFEL*SALWLC
Trigger: ACACAACCACAGTGCACTTCATAGTTCAAATTCACA...CTTGTCATTCCTATGTACAGTAGCTGGAAGTCGCAGTGAGCAAGCATAACCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp AAATGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATGAAAGCTGGGCAGCTTaGGAAATCAGTGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: KWIKSGQGTSEGMEHTGNESWAA*EISEVM
Trigger: CATCACCTCACTGATTTCTCAAGCTGCCCAGCTTTC...ATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp GAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGTCCATTAGAGACATTGGAGACTaGTTAGATGGCTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: EQLMYFQHTCPAVLLKSIRDIGD*LDGWAC
Trigger: ACAAGCCCAGCCATCTAATCAGTCTCCAATGTCTCT...AATGGACTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp AGCAGCACTGCTCTTGATCAGGTGCAAGTGCTGATCAGTTGTCTCATGATATTTAACCTTTGGCTGGGATaGAACAGGTGGAGTACTAAT +
Preference number: 4 (lower is better)
Translates to: SSTALDQVQVLISCLMIFNLWLG*NRWSTN
Trigger: ATTAGTACTCCACCTGTTTCATCCCAGCCAAAGGTT...AAATATCATGAGACAACTGATCAGCACTTGCACCTGATCAAGAGCAGTGCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp AAATGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATCTGTGTAGCCGAATGTaGCACTGGTCCTTGCTTAAC +
Preference number: 4 (lower is better)
Translates to: KWIKSGQGTSEGMEHTGNLCSRM*HWSLLN
Trigger: GTTAAGCAAGGACCAGTGTCACATTCGGCTACACAG...ATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp ACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATGGCTTCCCATGGCTACTTAAGCGCTaGAGACTTCGAGGAGAAACA +
Preference number: 4 (lower is better)
Translates to: TSALISFRCLSSVTHGFPWLLKR*RLRGET
Trigger: TGTTTCTCCTCGAAGTCTTCAGCGCTTAAGTAGCCA...TGGGAAGCCATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp CCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGCTCAAAATGTTATGACTGGTGGCTACTTAAGCGCTaGAGACTTCGAGGAGAAACA +
Preference number: 4 (lower is better)
Translates to: PSLTVHSLLKCSSKCYDWWLLKR*RLRGET
Trigger: TGTTTCTCCTCGAAGTCTTCAGCGCTTAAGTAGCCA...CCAGTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTTAAGCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp GCTCTTGATCAGGTGCAAGTGCTGATCAGTTGTCTCATGATATTTGTACACTGCTCTGCAGGCCACCCTTaGACATGCTTTATGAGATTA +
Preference number: 4 (lower is better)
Translates to: ALDQVQVLISCLMIFVHCSAGHP*TCFMRL
Trigger: TAATCTCATAAAGCATGTTCAAGGGTGGCCTGCAGA...GCAGTGTACAAATATCATGAGACAACTGATCAGCACTTGCACCTGATCAAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp GTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCTCTGCAGGCCACCCTTaGACATGCTTTATGAGATTA +
Preference number: 4 (lower is better)
Translates to: VPLSFHLPSLTVHSLLKCSAGHP*TCFMRL
Trigger: TAATCTCATAAAGCATGTTCAAGGGTGGCCTGCAGA...GCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp CACTTCCTTGTATTTGAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTATTCTTCACGCAATCTTaGTGCCTGTTTCTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: HFLVFEQLMYFQHTCPAVFFTQS*CLFLCV
Trigger: CACGCAGAGAAACAGGCATCAAGATTGCGTGAAGAA...TACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATACAAGGAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp AACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGTGTTCTTCACGCAATCTTaGTGCCTGTTTCTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: NISLQNKWSSTALDQVQVFFTQS*CLFLCV
Trigger: CACGCAGAGAAACAGGCATCAAGATTGCGTGAAGAA...CACTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp TGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATGAATTCTTCACGCAATCTTaGTGCCTGTTTCTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: WIKSGQGTSEGMEHTGNEFFTQS*CLFLCV
Trigger: CACGCAGAGAAACAGGCATCAAGATTGCGTGAAGAA...TTCATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp AGCAGCACTGCTCTTGATCAGGTGCAAGTGCTGATCAGTTGTCTCATGATATTTCCAGATGAGCTAATGTaGTCAGACCAATCATCTGCA +
Preference number: 4 (lower is better)
Translates to: SSTALDQVQVLISCLMIFPDELM*SDQSSA
Trigger: TGCAGATGATTGGTCTGAGCACATTAGCTCATCTGG...AAATATCATGAGACAACTGATCAGCACTTGCACCTGATCAAGAGCAGTGCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp ACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGTCCATTCTTAGGTGAAAATCCCACTAGTGGCTGTTaGTTGCATCACCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TFSTLAQQYFLSPFLGENPTSGC*LHHLSS
Trigger: AGAAGAGAGGTGATGCAAGCAACAGCCACTAGTGGG...ATTTTCACCTAAGAATGGACTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp AAATGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATAGCTGTAGCGTGGCTTaGAAAGCAGGAAGCAACTGT +
Preference number: 4 (lower is better)
Translates to: KWIKSGQGTSEGMEHTGNSCSVA*KAGSNC
Trigger: ACAGTTGCTTCCTGCTTTGCAAGCCACGCTACAGCT...ATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp AAAACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGTCAGCAGTTACAGGCTaGTGTGTAGCCGAATGTGAC +
Preference number: 4 (lower is better)
Translates to: KTYLCKTNGAALLLIRCKSAVTG*CVAECD
Trigger: GTCACATTCGGCTACACAGCAGCCTGTAACTGCTGA...CTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp TTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGCTCAAAATGTTATGACTCAGCAGTTACAGGCTaGTGTGTAGCCGAATGTGAC +
Preference number: 4 (lower is better)
Translates to: LPSLTVHSLLKCSSKCYDSAVTG*CVAECD
Trigger: GTCACATTCGGCTACACAGCAGCCTGTAACTGCTGA...GTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp ACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATGGCTTCCCAACAGGATCATGGCTCTaGTGCTTGTCAGCAGTTACA +
Preference number: 4 (lower is better)
Translates to: TSALISFRCLSSVTHGFPTGSWL*CLSAVT
Trigger: TGTAACTGCTGACAAGCAGCAGAGCCATGATCCTGT...TGGGAAGCCATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp ACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGTCCATTCTTAGGTGAAAATGCTACTGTGAGTCTCTaGTCTTGGCAGTCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: TFSTLAQQYFLSPFLGENATVSL*SWQSVV
Trigger: GACTACAGACTGCCAAGAGCAGAGACTCACAGTAGC...ATTTTCACCTAAGAATGGACTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp AAAATGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAAGCTACTGTGAGTCTCTaGTCTTGGCAGTCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: KMDKIRPRDFRGNGTYRKATVSL*SWQSVV
Trigger: GACTACAGACTGCCAAGAGCAGAGACTCACAGTAGC...TTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp AAAACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGACTGGTTTGATGGGGTaGTGTACTGGCGTAGAGCTA +
Preference number: 4 (lower is better)
Translates to: KTYLCKTNGAALLLIRCKTGLMG*CTGVEL
Trigger: TAGCTCTACGCCAGTACAGCACCCCATCAAACCAGT...CTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp GTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCGTACTAACCTTTGGCTaGGATGAAACAGGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: VPLSFHLPSLTVHSLLKCVLTFG*DETGGV
Trigger: TACTCCACCTGTTTCATCCCAGCCAAAGGTTAGTAC...GCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp ACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGTCCATTCTTAGGTGAAAATGGAGAAACAGGATCATaGCTCTGCTGCTTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: TFSTLAQQYFLSPFLGENGETGS*LCCLSA
Trigger: TGCTGACAAGCAGCAGAGCCATGATCCTGTTTCTCC...ATTTTCACCTAAGAATGGACTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp AATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATGAAAACATATGTGGGAGCAAACTACTaGCATCGCTGGAATGCTTGT +
Preference number: 4 (lower is better)
Translates to: NQAKGLQREWNIQEMKTYVGANY*HRWNAC
Trigger: ACAAGCATTCCAGCGATGCCAGTAGTTTGCTCCCAC...ATATGTTTTCATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp AATTTATACAAACGTGGGTTATGCTTGCTCACTGCGACTTCCAGCTACTGTACAGTGAGTCTCTGCTCTTaGCAGTCTGTAGTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: NLYKRGLCLLTATSSYCTVSLCS*QSVVFV
Trigger: GACAAAGACTACAGACTGCCAAGAGCAGAGACTCAC...TGTACAGTAGCTGGAAGTCGCAGTGAGCAAGCATAACCCACGTTTGTATAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp AACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGTGGTGAGTCTCTGCTCTTaGCAGTCTGTAGTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: NISLQNKWSSTALDQVQVVSLCS*QSVVFV
Trigger: GACAAAGACTACAGACTGCCAAGAGCAGAGACTCAC...CACTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp AAATGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATGCTTGGGGTAGCGGTTaGATGAACCACTGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: KWIKSGQGTSEGMEHTGNAWGSG*MNHWFD
Trigger: ATCAAACCAGTGGTTCATCCAACCGCTACCCCAAGC...ATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp GTATTTGAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGAGAAGGAACAGTGCTTaGGGTAGCGGTTGGATGAAC +
Preference number: 4 (lower is better)
Translates to: VFEQLMYFQHTCPAVLLKRRNSA*GSGWMN
Trigger: GTTCATCCAACCGCTACCCCAAGCACTGTTCCTTCT...CTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp GAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGTCCATTACTGGGGTGACTCTTTaGAGAATACTTAAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: EQLMYFQHTCPAVLLKSITGVTL*RILKCL
Trigger: CAGGCACTTAAGTATTCTTCAAAGAGTCACCCCAGT...AATGGACTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp CAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCACAGACGAAAGCTGGGCAGCTTaGGAAATCAGTGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: QGFYKSILYLSPELTLTDESWAA*EISEVM
Trigger: CATCACCTCACTGATTTCTCAAGCTGCCCAGCTTTC...GTCTGTGAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp AATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATGAAAACATATAGAGACATTGGAGACTaGTTAGATGGCTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: NQAKGLQREWNIQEMKTYRDIGD*LDGWAC
Trigger: ACAAGCCCAGCCATCTAATCAGTCTCCAATGTCTCT...ATATGTTTTCATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp GAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGTCCATTCCAGATGAGCTAATGTaGTCAGACCAATCATCTGCA +
Preference number: 4 (lower is better)
Translates to: EQLMYFQHTCPAVLLKSIPDELM*SDQSSA
Trigger: TGCAGATGATTGGTCTGAGCACATTAGCTCATCTGG...AATGGACTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp AACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGTGCCAGATGAGCTAATGTaGTCAGACCAATCATCTGCA +
Preference number: 4 (lower is better)
Translates to: NISLQNKWSSTALDQVQVPDELM*SDQSSA
Trigger: TGCAGATGATTGGTCTGAGCACATTAGCTCATCTGG...CACTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp AGCAGCACTGCTCTTGATCAGGTGCAAGTGCTGATCAGTTGTCTCATGATATTTTTGTGGATGATAGACTaGAGGGAAGCTTGTGTTACA +
Preference number: 4 (lower is better)
Translates to: SSTALDQVQVLISCLMIFLWMID*REACVT
Trigger: TGTAACACAAGCTTCCCTGCAGTCTATCATCCACAA...AAATATCATGAGACAACTGATCAGCACTTGCACCTGATCAAGAGCAGTGCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp GCTGATCAGTTGTCTCATGATATTTGTACACTGCTCATAAGGTTCAAAATCGTAGGATCATGGCTCTGCTaGTTGTCAGCAGTTACAGGC +
Preference number: 4 (lower is better)
Translates to: ADQLSHDICTLLIRFKIVGSWLC*LSAVTG
Trigger: GCCTGTAACTGCTGACAAGCAGCAGAGCCATGATCC...TACGATTTTGAACCTTATGAGCAGTGTACAAATATCATGAGACAACTGATCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp AATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATGAAAACATATACAGGATCATGGCTCTaGTGCTTGTCAGCAGTTACA +
Preference number: 4 (lower is better)
Translates to: NQAKGLQREWNIQEMKTYTGSWL*CLSAVT
Trigger: TGTAACTGCTGACAAGCAGCAGAGCCATGATCCTGT...ATATGTTTTCATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp GTATTTGAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGACAGGATCATGGCTCTaGTGCTTGTCAGCAGTTACA +
Preference number: 4 (lower is better)
Translates to: VFEQLMYFQHTCPAVLLKTGSWL*CLSAVT
Trigger: TGTAACTGCTGACAAGCAGCAGAGCCATGATCCTGT...CTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp AAAATGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAACGCAGGTCTAGCAGATaGATTCTGTGGTACAACAGT +
Preference number: 4 (lower is better)
Translates to: KMDKIRPRDFRGNGTYRKRRSSR*ILWYNS
Trigger: ACTGTTGTACCACAGAATGCATCTGCTAGACCTGCG...TTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp GTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCTGTGATCACCACTACTaGGGTGACTCTTTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: VPLSFHLPSLTVHSLLKCCDHHY*GDSLKN
Trigger: ATTCTTCAAAGAGTCACCCCAGTAGTGGTGATCACA...GCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp GCTGATCAGTTGTCTCATGATATTTGTACACTGCTCATAAGGTTCAAAATCGTACTTGTGGAGAGTAACTaGTCCCACCGTCCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: ADQLSHDICTLLIRFKIVLVESN*SHRPFL
Trigger: GAGAAAGGGACGGTGGGACCAGTTACTCTCCACAAG...TACGATTTTGAACCTTATGAGCAGTGTACAAATATCATGAGACAACTGATCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp GTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCGCAGTAAGAAACTTGTaGATGATAGACTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: VPLSFHLPSLTVHSLLKCAVRNL*MIDCRE
Trigger: TTCCCTGCAGTCTATCATCCACAAGTTTCTTACTGC...GCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp AACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGTGTGGAGACTGATTAGATaGCTGGGCTTGTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: NISLQNKWSSTALDQVQVWRLIR*LGLCRK
Trigger: CTTTCTACACAAGCCCAGCCATCTAATCAGTCTCCA...CACTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp GTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGGTGTGCTTATTCTTaGAGACACATAGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: VPLSFHLPSLTVHSLLKCRCAYS*RHIGSW
Trigger: CCAAGATCCTATGTGTCTCCAAGAATAAGCACACCT...GCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp ACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATGGCTTCCCAGTACTAACCTTTGGCTaGGATGAAACAGGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: TSALISFRCLSSVTHGFPVLTFG*DETGGV
Trigger: TACTCCACCTGTTTCATCCCAGCCAAAGGTTAGTAC...TGGGAAGCCATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp TGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATGAAAACTACTGGCATCGCTaGAATGCTTGTCTTCCATTC +
Preference number: 4 (lower is better)
Translates to: WIKSGQGTSEGMEHTGNENYWHR*NACLPF
Trigger: GAATGGAAGACAAGCATTCCAGCGATGCCAGTAGTT...TTCATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp AAATGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATACTGGGGTGACTCTTTaGAGAATACTTAAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: KWIKSGQGTSEGMEHTGNTGVTL*RILKCL
Trigger: CAGGCACTTAAGTATTCTTCAAAGAGTCACCCCAGT...ATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp AAAACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGTTTTTGGCCTTGTTGTaGCCTGTGCTGTCACTGTAT +
Preference number: 4 (lower is better)
Translates to: KTYLCKTNGAALLLIRCKFLALL*PVLSLY
Trigger: ATACAGTGACAGCACAGGTCACAACAAGGCCAAAAA...CTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp AAAACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGATAGGATCTTGGGGATaGAGCATCAGATGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: KTYLCKTNGAALLLIRCKIGSWG*SIRCQR
Trigger: TCTCTGACATCTGATGCTTCATCCCCAAGATCCTAT...CTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp AAAATGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAAATAGGATCTTGGGGATaGAGCATCAGATGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: KMDKIRPRDFRGNGTYRKIGSWG*SIRCQR
Trigger: TCTCTGACATCTGATGCTTCATCCCCAAGATCCTAT...TTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp CACTTCCTTGTATTTGAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTAGGGACTGTATTAGTTTaGGGTGTGCTTATTCTTGGA +
Preference number: 4 (lower is better)
Translates to: HFLVFEQLMYFQHTCPAVGTVLV*GVLILG
Trigger: TCCAAGAATAAGCACACCTCAAACTAATACAGTCCC...TACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATACAAGGAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp CCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGCTCAAAATGTTATGACTGGGGGACTGTATTAGTTTaGGGTGTGCTTATTCTTGGA +
Preference number: 4 (lower is better)
Translates to: PSLTVHSLLKCSSKCYDWGTVLV*GVLILG
Trigger: TCCAAGAATAAGCACACCTCAAACTAATACAGTCCC...CCAGTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTTAAGCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp AAATGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATAACCTTTGGCTGGGATaGAACAGGTGGAGTACTAAT +
Preference number: 4 (lower is better)
Translates to: KWIKSGQGTSEGMEHTGNNLWLG*NRWSTN
Trigger: ATTAGTACTCCACCTGTTTCATCCCAGCCAAAGGTT...ATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp GTATTTGAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGAACCTTTGGCTGGGATaGAACAGGTGGAGTACTAAT +
Preference number: 4 (lower is better)
Translates to: VFEQLMYFQHTCPAVLLKNLWLG*NRWSTN
Trigger: ATTAGTACTCCACCTGTTTCATCCCAGCCAAAGGTT...CTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp TATTTAGCCACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATCTGTGTAGCCGAATGTaGCACTGGTCCTTGCTTAAC +
Preference number: 4 (lower is better)
Translates to: YLATSALISFRCLSSVTHLCSRM*HWSLLN
Trigger: GTTAAGCAAGGACCAGTGTCACATTCGGCTACACAG...ATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGTGGCTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp GCTCTTGATCAGGTGCAAGTGCTGATCAGTTGTCTCATGATATTTGTACACTGCTCTCGCAAAGTTGCTTaGATTTCACATACTCGAACT +
Preference number: 4 (lower is better)
Translates to: ALDQVQVLISCLMIFVHCSRKVA*ISHTRT
Trigger: AGTTCGAGTATGTGAAATTCAAGCAACTTTGCGAGA...GCAGTGTACAAATATCATGAGACAACTGATCAGCACTTGCACCTGATCAAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp AACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGTGCTCAGACCAATCATCTaGAGAATCATAAGGTGCATC +
Preference number: 4 (lower is better)
Translates to: NISLQNKWSSTALDQVQVLRPII*RIIRCI
Trigger: GATGCACCTTATGATTCTGCAGATGATTGGTCTGAG...CACTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp CCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGCTCAAAATGTTATGACTGGCTCAGACCAATCATCTaGAGAATCATAAGGTGCATC +
Preference number: 4 (lower is better)
Translates to: PSLTVHSLLKCSSKCYDWLRPII*RIIRCI
Trigger: GATGCACCTTATGATTCTGCAGATGATTGGTCTGAG...CCAGTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTTAAGCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp TATTTAGCCACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATCCCACTAGTGGCTGTTaGTTGCATCACCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: YLATSALISFRCLSSVTHPTSGC*LHHLSS
Trigger: AGAAGAGAGGTGATGCAAGCAACAGCCACTAGTGGG...ATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGTGGCTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp GTGGGTTATGCTTGCTCACTGCGACTTCCAGCTACTGTACATAGGAATGACAAGATGTGGAAGGAGTTGTaGAAGAATGTGATATTGATT +
Preference number: 4 (lower is better)
Translates to: VGYACSLRLPATVHRNDKMWKEL*KNVILI
Trigger: AATCAATATCACATTCTTGCACAACTCCTTCCACAT...CTTGTCATTCCTATGTACAGTAGCTGGAAGTCGCAGTGAGCAAGCATAACCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp CCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGCTCAAAATGTTATGACTGGTTGTGGATGATAGACTaGAGGGAAGCTTGTGTTACA +
Preference number: 4 (lower is better)
Translates to: PSLTVHSLLKCSSKCYDWLWMID*REACVT
Trigger: TGTAACACAAGCTTCCCTGCAGTCTATCATCCACAA...CCAGTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTTAAGCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp CCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGCTCAAAATGTTATGACTGGCTGCTCTCGCAAAGTTaGTTGAATTTCACATACTCG +
Preference number: 4 (lower is better)
Translates to: PSLTVHSLLKCSSKCYDWLLSQS*LNFTYS
Trigger: CGAGTATGTGAAATTCAAGCAACTTTGCGAGAGCAG...CCAGTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTTAAGCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp TATTTAGCCACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATACTGGTTTGATGGGGTaGTGTACTGGCGTAGAGCTA +
Preference number: 4 (lower is better)
Translates to: YLATSALISFRCLSSVTHTGLMG*CTGVEL
Trigger: TAGCTCTACGCCAGTACAGCACCCCATCAAACCAGT...ATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGTGGCTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp CCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGCTCAAAATGTTATGACTGGTGTGATCACCACTACTaGGGTGACTCTTTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: PSLTVHSLLKCSSKCYDWCDHHY*GDSLKN
Trigger: ATTCTTCAAAGAGTCACCCCAGTAGTGGTGATCACA...CCAGTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTTAAGCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp GCTGATCAGTTGTCTCATGATATTTGTACACTGCTCATAAGGTTCAAAATCGTAGAGTGTGCACGTTTTTaGCCTTGTTGTGACCTGTGC +
Preference number: 4 (lower is better)
Translates to: ADQLSHDICTLLIRFKIVECARF*PCCDLC
Trigger: GCACAGGTCACAACAAGGCCAAAAACGTGCACACTC...TACGATTTTGAACCTTATGAGCAGTGTACAAATATCATGAGACAACTGATCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp GCTCTTGATCAGGTGCAAGTGCTGATCAGTTGTCTCATGATATTTGTACACTGCGTAATCCCTGTCTTTTaGGAAACTATTAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: ALDQVQVLISCLMIFVHCVIPVF*ETINCQ
Trigger: CTGGCAGTTAATAGTTTCCCAAAAGACAGGGATTAC...GCAGTGTACAAATATCATGAGACAACTGATCAGCACTTGCACCTGATCAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp GTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCGTAATCCCTGTCTTTTaGGAAACTATTAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: VPLSFHLPSLTVHSLLKCVIPVF*ETINCQ
Trigger: CTGGCAGTTAATAGTTTCCCAAAAGACAGGGATTAC...GCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp GAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGTCCATTGCAGTAAGAAACTTGTaGATGATAGACTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: EQLMYFQHTCPAVLLKSIAVRNL*MIDCRE
Trigger: TTCCCTGCAGTCTATCATCCACAAGTTTCTTACTGC...AATGGACTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp ACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATGGCTTCCCAGCAGTAAGAAACTTGTaGATGATAGACTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: TSALISFRCLSSVTHGFPAVRNL*MIDCRE
Trigger: TTCCCTGCAGTCTATCATCCACAAGTTTCTTACTGC...TGGGAAGCCATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp AGTGCTGATCAGTTGTCTCATGATATTTGTACACTGCTCATAAGGTTCAAAATCGGAGAAACAGGATCATaGCTCTGCTGCTTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SADQLSHDICTLLIRFKIGETGS*LCCLSA
Trigger: TGCTGACAAGCAGCAGAGCCATGATCCTGTTTCTCC...GATTTTGAACCTTATGAGCAGTGTACAAATATCATGAGACAACTGATCAGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp GTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCACACTTCCCATATTATaGGCTTCTTCACGCAATCTT +
Preference number: 4 (lower is better)
Translates to: VPLSFHLPSLTVHSLLKCTLPIL*ASSRNL
Trigger: AAGATTGCGTGAAGAAGCCCATAATATGGGAAGTGT...GCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp ACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGTCCATTCTTAGGTGAAAATAACTACTGGCATCGCTaGAATGCTTGTCTTCCATTC +
Preference number: 4 (lower is better)
Translates to: TFSTLAQQYFLSPFLGENNYWHR*NACLPF
Trigger: GAATGGAAGACAAGCATTCCAGCGATGCCAGTAGTT...ATTTTCACCTAAGAATGGACTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp ACATTTCAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCGATGGGGTGCTGTACTaGCGTAGAGCTACTGTGAGT +
Preference number: 4 (lower is better)
Translates to: TFQGFYKSILYLSPELTLDGVLY*RRATVS
Trigger: ACTCACAGTAGCTCTACGCCAGTACAGCACCCCATC...GAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTGAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp TATTTAGCCACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATGCTTGGGGTAGCGGTTaGATGAACCACTGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: YLATSALISFRCLSSVTHAWGSG*MNHWFD
Trigger: ATCAAACCAGTGGTTCATCCAACCGCTACCCCAAGC...ATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGTGGCTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp AACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGTGAGACTGAAGCGTAAATaGACTAGAAGGAACAGTGCT +
Preference number: 4 (lower is better)
Translates to: NISLQNKWSSTALDQVQVRLKRK*TRRNSA
Trigger: AGCACTGTTCCTTCTAGTCCATTTACGCTTCAGTCT...CACTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp CAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCACAGACATAGGATCTTGGGGATaGAGCATCAGATGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: QGFYKSILYLSPELTLTDIGSWG*SIRCQR
Trigger: TCTCTGACATCTGATGCTTCATCCCCAAGATCCTAT...GTCTGTGAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp CACTTCCTTGTATTTGAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTATTACTACTACAAGTATaGTTTGGACCAGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: HFLVFEQLMYFQHTCPAVLLLQV*FGPGDG
Trigger: TCCATCACCTGGTCCAAATCATACTTGTAGTAGTAA...TACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATACAAGGAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp CCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGCTCAAAATGTTATGACTGGTTACTACTACAAGTATaGTTTGGACCAGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: PSLTVHSLLKCSSKCYDWLLLQV*FGPGDG
Trigger: TCCATCACCTGGTCCAAATCATACTTGTAGTAGTAA...CCAGTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTTAAGCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp CACTTCCTTGTATTTGAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTATCCATTAGCATCAAATaGTTTCTTTGGCTGGTGATC +
Preference number: 4 (lower is better)
Translates to: HFLVFEQLMYFQHTCPAVSISIK*FLWLVI
Trigger: GATCACCAGCCAAAGAAATCATTTGATGCTAATGGA...TACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATACAAGGAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp TATTTGTACACTGCTCATAAGGTTCAAAATCGTATCCTCAGACACAGATCACCTCCATCACTGAGTCTCTaGTGTTTCCTCGCATACATT +
Preference number: 4 (lower is better)
Translates to: YLYTAHKVQNRILRHRSPPSLSL*CFLAYI
Trigger: AATGTATGCGAGGAAACAGCAGAGACTCAGTGATGG...AGGTGATCTGTGTCTGAGGATACGATTTTGAACCTTATGAGCAGTGTACAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp GAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGTCCATTCCTTGTTGTGACCTGTaGTGTCACTGTATTTGTTTT +
Preference number: 4 (lower is better)
Translates to: EQLMYFQHTCPAVLLKSIPCCDL*CHCICF
Trigger: AAAACAAATACAGTGACAGCACAGGTCACAACAAGG...AATGGACTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp CACTTCCTTGTATTTGAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACCTTGTTGTGACCTGTaGTGTCACTGTATTTGTTTT +
Preference number: 4 (lower is better)
Translates to: HFLVFEQLMYFQHTCPAVPCCDL*CHCICF
Trigger: AAAACAAATACAGTGACAGCACAGGTCACAACAAGG...TACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATACAAGGAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp AATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATGAAAACATATCTCAGACCAATCATCTaGAGAATCATAAGGTGCATC +
Preference number: 4 (lower is better)
Translates to: NQAKGLQREWNIQEMKTYLRPII*RIIRCI
Trigger: GATGCACCTTATGATTCTGCAGATGATTGGTCTGAG...ATATGTTTTCATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp GTATTTGAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGCTCAGACCAATCATCTaGAGAATCATAAGGTGCATC +
Preference number: 4 (lower is better)
Translates to: VFEQLMYFQHTCPAVLLKLRPII*RIIRCI
Trigger: GATGCACCTTATGATTCTGCAGATGATTGGTCTGAG...CTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp GTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCAACTGCCAGCTTATTTaGTTCTTTTTGTCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: VPLSFHLPSLTVHSLLKCNCQLI*FFLSLF
Trigger: GAACAGAGACAAAAAGAAGCAAATAAGCTGGCAGTT...GCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp AAAACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGTTGTGGATGATAGACTaGAGGGAAGCTTGTGTTACA +
Preference number: 4 (lower is better)
Translates to: KTYLCKTNGAALLLIRCKLWMID*REACVT
Trigger: TGTAACACAAGCTTCCCTGCAGTCTATCATCCACAA...CTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp GTATTTGAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGTTGTGGATGATAGACTaGAGGGAAGCTTGTGTTACA +
Preference number: 4 (lower is better)
Translates to: VFEQLMYFQHTCPAVLLKLWMID*REACVT
Trigger: TGTAACACAAGCTTCCCTGCAGTCTATCATCCACAA...CTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp GTATTTGAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGCTGCTCTCGCAAAGTTaGTTGAATTTCACATACTCG +
Preference number: 4 (lower is better)
Translates to: VFEQLMYFQHTCPAVLLKLLSQS*LNFTYS
Trigger: CGAGTATGTGAAATTCAAGCAACTTTGCGAGAGCAG...CTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp AACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGTGGTAATCCCTGTCTTTTaGGAAACTATTAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: NISLQNKWSSTALDQVQVVIPVF*ETINCQ
Trigger: CTGGCAGTTAATAGTTTCCCAAAAGACAGGGATTAC...CACTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp TATTTGTACACTGCTCATAAGGTTCAAAATCGTATCCTCAGACACAGATCACCTTGGAGACTGATTAGATaGCTGGGCTTGTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: YLYTAHKVQNRILRHRSPWRLIR*LGLCRK
Trigger: CTTTCTACACAAGCCCAGCCATCTAATCAGTCTCCA...AGGTGATCTGTGTCTGAGGATACGATTTTGAACCTTATGAGCAGTGTACAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp ACATTTCAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCGGAGAAACAGGATCATaGCTCTGCTGCTTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: TFQGFYKSILYLSPELTLGETGS*LCCLSA
Trigger: TGCTGACAAGCAGCAGAGCCATGATCCTGTTTCTCC...GAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTGAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp CCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGCTCAAAATGTTATGACTGGACACTTCCCATATTATaGGCTTCTTCACGCAATCTT +
Preference number: 4 (lower is better)
Translates to: PSLTVHSLLKCSSKCYDWTLPIL*ASSRNL
Trigger: AAGATTGCGTGAAGAAGCCCATAATATGGGAAGTGT...CCAGTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTTAAGCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp ACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATGGCTTCCCAACACTTCCCATATTATaGGCTTCTTCACGCAATCTT +
Preference number: 4 (lower is better)
Translates to: TSALISFRCLSSVTHGFPTLPIL*ASSRNL
Trigger: AAGATTGCGTGAAGAAGCCCATAATATGGGAAGTGT...TGGGAAGCCATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp AAATGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATAGACTGAAGCGTAAATaGACTAGAAGGAACAGTGCT +
Preference number: 4 (lower is better)
Translates to: KWIKSGQGTSEGMEHTGNRLKRK*TRRNSA
Trigger: AGCACTGTTCCTTCTAGTCCATTTACGCTTCAGTCT...ATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp AGTGCTGATCAGTTGTCTCATGATATTTGTACACTGCTCATAAGGTTCAAAATCTTTTTGGCCTTGTTGTaGCCTGTGCTGTCACTGTAT +
Preference number: 4 (lower is better)
Translates to: SADQLSHDICTLLIRFKIFLALL*PVLSLY
Trigger: ATACAGTGACAGCACAGGTCACAACAAGGCCAAAAA...GATTTTGAACCTTATGAGCAGTGTACAAATATCATGAGACAACTGATCAGCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp AATAATTTATACAAACGTGGGTTATGCTTGCTCACTGCGACTTCCAGCTACTGTTGTGAATTTGAACTATaGAGTGCACTGTGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: NNLYKRGLCLLTATSSYCCEFEL*SALWLC
Trigger: ACACAACCACAGTGCACTTCATAGTTCAAATTCACA...ACAGTAGCTGGAAGTCGCAGTGAGCAAGCATAACCCACGTTTGTATAAATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp GTATTTGAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGTGTGAATTTGAACTATaGAGTGCACTGTGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: VFEQLMYFQHTCPAVLLKCEFEL*SALWLC
Trigger: ACACAACCACAGTGCACTTCATAGTTCAAATTCACA...CTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp GCTGATCAGTTGTCTCATGATATTTGTACACTGCTCATAAGGTTCAAAATCGTAATAGGATCTTGGGGATaGAGCATCAGATGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: ADQLSHDICTLLIRFKIVIGSWG*SIRCQR
Trigger: TCTCTGACATCTGATGCTTCATCCCCAAGATCCTAT...TACGATTTTGAACCTTATGAGCAGTGTACAAATATCATGAGACAACTGATCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp TATTTAGCCACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATAACCTTTGGCTGGGATaGAACAGGTGGAGTACTAAT +
Preference number: 4 (lower is better)
Translates to: YLATSALISFRCLSSVTHNLWLG*NRWSTN
Trigger: ATTAGTACTCCACCTGTTTCATCCCAGCCAAAGGTT...ATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGTGGCTAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp CCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGCTCAAAATGTTATGACTGGTACAACAGTTGCAGTTaGTGCATTACTACTACAAGT +
Preference number: 4 (lower is better)
Translates to: PSLTVHSLLKCSSKCYDWYNSCS*CITTTS
Trigger: ACTTGTAGTAGTAATGCATCAACTGCAACTGTTGTA...CCAGTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTTAAGCTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp TGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATGAATACAACAGTTGCAGTTaGTGCATTACTACTACAAGT +
Preference number: 4 (lower is better)
Translates to: WIKSGQGTSEGMEHTGNEYNSCS*CITTTS
Trigger: ACTTGTAGTAGTAATGCATCAACTGCAACTGTTGTA...TTCATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp ACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATGGCTTCCCATACAACAGTTGCAGTTaGTGCATTACTACTACAAGT +
Preference number: 4 (lower is better)
Translates to: TSALISFRCLSSVTHGFPYNSCS*CITTTS
Trigger: ACTTGTAGTAGTAATGCATCAACTGCAACTGTTGTA...TGGGAAGCCATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp TATTTAGCCACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATCCATCACTGAGTCTCTaGTGTTTCCTCGCATACATT +
Preference number: 4 (lower is better)
Translates to: YLATSALISFRCLSSVTHPSLSL*CFLAYI
Trigger: AATGTATGCGAGGAAACAGCAGAGACTCAGTGATGG...ATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGTGGCTAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp TGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATGAAACTGTGAAACTTCTGTaGGACAATTGTAGTAGTACT +
Preference number: 4 (lower is better)
Translates to: WIKSGQGTSEGMEHTGNETVKLL*DNCSST
Trigger: AGTACTACTACAATTGTCGCACAGAAGTTTCACAGT...TTCATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp ACATTTCAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCCGCAGGTCTAGCAGATaGATTCTGTGGTACAACAGT +
Preference number: 4 (lower is better)
Translates to: TFQGFYKSILYLSPELTLRRSSR*ILWYNS
Trigger: ACTGTTGTACCACAGAATGCATCTGCTAGACCTGCG...GAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTGAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp GATCTAGAAGAAAACATCTGCCCCAACAATGCAATTCTTAAGTCAGATGTTACATGGAGACTGATTAGATaGCTGGGCTTGTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: DLEENICPNNAILKSDVTWRLIR*LGLCRK
Trigger: CTTTCTACACAAGCCCAGCCATCTAATCAGTCTCCA...TGTAACATCTGACTTAAGAATTGCATTGTTGGGGCAGATGTTTTCTTCTAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp TATTTGTACACTGCTCATAAGGTTCAAAATCGTATCCTCAGACACAGATCACCTAGATGTCAGAGACATTaGAGACTGATTAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: YLYTAHKVQNRILRHRSPRCQRH*RLIRWL
Trigger: CAGCCATCTAATCAGTCTCCAATGTCTCTGACATCT...AGGTGATCTGTGTCTGAGGATACGATTTTGAACCTTATGAGCAGTGTACAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp CAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCACAGACAGGTGTGCTTATTCTTaGAGACACATAGGATCTTGG +
Preference number: 4 (lower is better)
Translates to: QGFYKSILYLSPELTLTDRCAYS*RHIGSW
Trigger: CCAAGATCCTATGTGTCTCCAAGAATAAGCACACCT...GTCTGTGAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp AAAACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGAGACAAAATATTCTGTaGGAGCAAACTACTGGCATC +
Preference number: 4 (lower is better)
Translates to: KTYLCKTNGAALLLIRCKRQNIL*EQTTGI
Trigger: GATGCCAGTAGTTTGCTCCCACAGAATATTTTGTCT...CTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp CAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCACAGACTCCATTAGCATCAAATaGTTTCTTTGGCTGGTGATC +
Preference number: 4 (lower is better)
Translates to: QGFYKSILYLSPELTLTDSISIK*FLWLVI
Trigger: GATCACCAGCCAAAGAAATCATTTGATGCTAATGGA...GTCTGTGAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp AATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATGAAAACATATGTGCATCTGAAGTTTTaGTTGGATTATTGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: NQAKGLQREWNIQEMKTYVHLKF*LDYCLD
Trigger: ATCCAAGCAATAATCCAAGCAAAACTTCAGATGCAC...ATATGTTTTCATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp TTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGCTCAAAATGTTATGACGTGCATCTGAAGTTTTaGTTGGATTATTGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: LPSLTVHSLLKCSSKCYDVHLKF*LDYCLD
Trigger: ATCCAAGCAATAATCCAAGCAAAACTTCAGATGCAC...GTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp ACATTTCAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCCCAGATGAGCTAATGTaGTCAGACCAATCATCTGCA +
Preference number: 4 (lower is better)
Translates to: TFQGFYKSILYLSPELTLPDELM*SDQSSA
Trigger: TGCAGATGATTGGTCTGAGCACATTAGCTCATCTGG...GAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTGAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp ACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGTCCATTCTTAGGTGAAAATACTGTGAAACTTCTGTaGGACAATTGTAGTAGTACT +
Preference number: 4 (lower is better)
Translates to: TFSTLAQQYFLSPFLGENTVKLL*DNCSST
Trigger: AGTACTACTACAATTGTCGCACAGAAGTTTCACAGT...ATTTTCACCTAAGAATGGACTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp GTATTTGAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGACTGTGAAACTTCTGTaGGACAATTGTAGTAGTACT +
Preference number: 4 (lower is better)
Translates to: VFEQLMYFQHTCPAVLLKTVKLL*DNCSST
Trigger: AGTACTACTACAATTGTCGCACAGAAGTTTCACAGT...CTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp TTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGCTCAAAATGTTATGACACTGTGAAACTTCTGTaGGACAATTGTAGTAGTACT +
Preference number: 4 (lower is better)
Translates to: LPSLTVHSLLKCSSKCYDTVKLL*DNCSST
Trigger: AGTACTACTACAATTGTCGCACAGAAGTTTCACAGT...GTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp AAAACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGAACTGCCAGCTTATTTaGTTCTTTTTGTCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: KTYLCKTNGAALLLIRCKNCQLI*FFLSLF
Trigger: GAACAGAGACAAAAAGAAGCAAATAAGCTGGCAGTT...CTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp AATTTATACAAACGTGGGTTATGCTTGCTCACTGCGACTTCCAGCTACTGTACAATGTGGAAGGAGTTGTaGAAGAATGTGATATTGATT +
Preference number: 4 (lower is better)
Translates to: NLYKRGLCLLTATSSYCTMWKEL*KNVILI
Trigger: AATCAATATCACATTCTTGCACAACTCCTTCCACAT...TGTACAGTAGCTGGAAGTCGCAGTGAGCAAGCATAACCCACGTTTGTATAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp GAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGTCCATTATGTGGAAGGAGTTGTaGAAGAATGTGATATTGATT +
Preference number: 4 (lower is better)
Translates to: EQLMYFQHTCPAVLLKSIMWKEL*KNVILI
Trigger: AATCAATATCACATTCTTGCACAACTCCTTCCACAT...AATGGACTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp ACATTTCAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCTGGAGACTGATTAGATaGCTGGGCTTGTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: TFQGFYKSILYLSPELTLWRLIR*LGLCRK
Trigger: CTTTCTACACAAGCCCAGCCATCTAATCAGTCTCCA...GAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTGAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp AGTGCTGATCAGTTGTCTCATGATATTTGTACACTGCTCATAAGGTTCAAAATCAGATGTCAGAGACATTaGAGACTGATTAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: SADQLSHDICTLLIRFKIRCQRH*RLIRWL
Trigger: CAGCCATCTAATCAGTCTCCAATGTCTCTGACATCT...GATTTTGAACCTTATGAGCAGTGTACAAATATCATGAGACAACTGATCAGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp GCTGATCAGTTGTCTCATGATATTTGTACACTGCTCATAAGGTTCAAAATCGTAAGATGTCAGAGACATTaGAGACTGATTAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: ADQLSHDICTLLIRFKIVRCQRH*RLIRWL
Trigger: CAGCCATCTAATCAGTCTCCAATGTCTCTGACATCT...TACGATTTTGAACCTTATGAGCAGTGTACAAATATCATGAGACAACTGATCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp TATTTAGCCACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATTCTCGCAAAGTTGCTTaGATTTCACATACTCGAACT +
Preference number: 4 (lower is better)
Translates to: YLATSALISFRCLSSVTHSRKVA*ISHTRT
Trigger: AGTTCGAGTATGTGAAATTCAAGCAACTTTGCGAGA...ATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGTGGCTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp CAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCACAGACGTGCATCTGAAGTTTTaGTTGGATTATTGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: QGFYKSILYLSPELTLTDVHLKF*LDYCLD
Trigger: ATCCAAGCAATAATCCAAGCAAAACTTCAGATGCAC...GTCTGTGAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp ACATTTCAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCCTGCTCTCGCAAAGTTaGTTGAATTTCACATACTCG +
Preference number: 4 (lower is better)
Translates to: TFQGFYKSILYLSPELTLLLSQS*LNFTYS
Trigger: CGAGTATGTGAAATTCAAGCAACTTTGCGAGAGCAG...GAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTGAAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp AGTGCTGATCAGTTGTCTCATGATATTTGTACACTGCTCATAAGGTTCAAAATCGATGTTGAAAGCAGATaGTCCAGCAGTAAGAAACTT +
Preference number: 4 (lower is better)
Translates to: SADQLSHDICTLLIRFKIDVESR*SSSKKL
Trigger: AAGTTTCTTACTGCTGGACCATCTGCTTTCAACATC...GATTTTGAACCTTATGAGCAGTGTACAAATATCATGAGACAACTGATCAGCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp TATTTAGCCACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATGATGTTGAAAGCAGATaGTCCAGCAGTAAGAAACTT +
Preference number: 4 (lower is better)
Translates to: YLATSALISFRCLSSVTHDVESR*SSSKKL
Trigger: AAGTTTCTTACTGCTGGACCATCTGCTTTCAACATC...ATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGTGGCTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR TCA 90 bp GATCTAGAAGAAAACATCTGCCCCAACAATGCAATTCTTAAGTCAGATGTTACATACAACAGTTGCAGTTaGTGCATTACTACTACAAGT +
Preference number: 4 (lower is better)
Translates to: DLEENICPNNAILKSDVTYNSCS*CITTTS
Trigger: ACTTGTAGTAGTAATGCATCAACTGCAACTGTTGTA...TGTAACATCTGACTTAAGAATTGCATTGTTGGGGCAGATGTTTTCTTCTAGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000167020.8
CDS-3UTR TCA 90 bp ACATTTCAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCTCTCGCAAAGTTGCTTaGATTTCACATACTCGAACT +
Preference number: 4 (lower is better)
Translates to: TFQGFYKSILYLSPELTLSRKVA*ISHTRT
Trigger: AGTTCGAGTATGTGAAATTCAAGCAACTTTGCGAGA...GAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTGAAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR GCA 90 bp GCTGATCAGTTGTCTCATGATATTTGTACACTGCTCATAAGGTTCAAAATCGTAAACTGCCAGCTTATTTaGTTCTTTTTGTCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: ADQLSHDICTLLIRFKIVNCQLI*FFLSLF
Trigger: GAACAGAGACAAAAAGAAGCAAATAAGCTGGCAGTT...TACGATTTTGAACCTTATGAGCAGTGTACAAATATCATGAGACAACTGATCAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CCA 90 bp ACATTTCAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCGTAATCCCTGTCTTTTaGGAAACTATTAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: TFQGFYKSILYLSPELTLVIPVF*ETINCQ
Trigger: CTGGCAGTTAATAGTTTCCCAAAAGACAGGGATTAC...GAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTGAAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp ACATTTCAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCGATGTTGAAAGCAGATaGTCCAGCAGTAAGAAACTT +
Preference number: 4 (lower is better)
Translates to: TFQGFYKSILYLSPELTLDVESR*SSSKKL
Trigger: AAGTTTCTTACTGCTGGACCATCTGCTTTCAACATC...GAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTGAAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CCA 90 bp ACATTTCAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCAGACAAAATATTCTGTaGGAGCAAACTACTGGCATC +
Preference number: 4 (lower is better)
Translates to: TFQGFYKSILYLSPELTLRQNIL*EQTTGI
Trigger: GATGCCAGTAGTTTGCTCCCACAGAATATTTTGTCT...GAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTGAAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR GCA 90 bp ACATTTCAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCGTGCATCTGAAGTTTTaGTTGGATTATTGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: TFQGFYKSILYLSPELTLVHLKF*LDYCLD
Trigger: ATCCAAGCAATAATCCAAGCAAAACTTCAGATGCAC...GAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTGAAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS CCA 90 bp TGGGGTAGCGGTTGGATGAACCACTGGTTTGATGGGGTGCTGTACTaGCGTAGAGCTACTGTGAGTCTCTGCTCTTGGCAGTCTGTAGTC +
Preference number: 5 (lower is better)
Translates to: WGSGWMNHWFDGVLY*RRATVSLCSWQSVV
Trigger: GACTACAGACTGCCAAGAGCAGAGACTCACAGTAGCTCTACGCCAGTACAGCACCCCATCAAACCAGTGGTTCATCCAACCGCTACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000074919.11
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000170854.2
ENSMUST00000172018.8
CDS CCA 90 bp TGGACTAGAAGGAACAGTGCTTGGGGTAGCGGTTGGATGAACCACTaGTTTGATGGGGTGCTGTACTGGCGTAGAGCTACTGTGAGTCTC +
Preference number: 5 (lower is better)
Translates to: WTRRNSAWGSGWMNH*FDGVLYWRRATVSL
Trigger: GAGACTCACAGTAGCTCTACGCCAGTACAGCACCCCATCAAACCAGTGGTTCATCCAACCGCTACCCCAAGCACTGTTCCTTCTAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000074919.11
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000170854.2
ENSMUST00000172018.8
CDS TCA 90 bp AGCGTAAATGGACTAGAAGGAACAGTGCTTGGGGTAGCGGTTGGATaGACCACTGGTTTGATGGGGTGCTGTACTGGCGTAGAGCTACTG +
Preference number: 5 (lower is better)
Translates to: SVNGLEGTVLGVAVG*TTGLMGCCTGVELL
Trigger: CAGTAGCTCTACGCCAGTACAGCACCCCATCAAACCAGTGGTTCATCCAACCGCTACCCCAAGCACTGTTCCTTCTAGTCCATTTACGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000074919.11
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000167542.2
ENSMUST00000170854.2
ENSMUST00000172018.8
CDS CCA 90 bp CTGAAGCGTAAATGGACTAGAAGGAACAGTGCTTGGGGTAGCGGTTaGATGAACCACTGGTTTGATGGGGTGCTGTACTGGCGTAGAGCT +
Preference number: 5 (lower is better)
Translates to: LKRKWTRRNSAWGSG*MNHWFDGVLYWRRA
Trigger: AGCTCTACGCCAGTACAGCACCCCATCAAACCAGTGGTTCATCCAACCGCTACCCCAAGCACTGTTCCTTCTAGTCCATTTACGCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000074919.11
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000167542.2
ENSMUST00000170854.2
ENSMUST00000172018.8
CDS CCA 90 bp TGGACTAGAAGGAACAGTGCTTGGGGTAGCGGTTGGATGAACCACTaGTTTGATGGGGTGCTGTACTGGCGTAGAGCTACTGTGAGTCNN +
Preference number: 5 (lower is better)
Translates to: WTRRNSAWGSGWMNH*FDGVLYWRRATVSX
Trigger: NNGACTCACAGTAGCTCTACGCCAGTACAGCACCCCATCAAACCAGTGGTTCATCCAACCGCTACCCCAAGCACTGTTCCTTCTAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000167542.2
CDS GCA 90 bp GGAGAAACAGGATCATGGCTCTGCTGCTTGTCAGCAGTTACAGGCTaGTGTGTAGCCGAATGTGACACTGGTCCTTGCTTAACTACTGGA +
Preference number: 5 (lower is better)
Translates to: GETGSWLCCLSAVTG*CVAECDTGPCLTTG
Trigger: TCCAGTAGTTAAGCAAGGACCAGTGTCACATTCGGCTACACAGCAGCCTGTAACTGCTGACAAGCAGCAGAGCCATGATCCTGTTTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000165854.8
ENSMUST00000167020.8
ENSMUST00000171042.8
ENSMUST00000171486.8
ENSMUST00000172018.8
CDS CCA 90 bp CTGGTGATCAGACTGAAGCGTAAATGGACTAGAAGGAACAGTGCTTaGGGTAGCGGTTGGATGAACCACTGGTTTGATGGGGTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: LVIRLKRKWTRRNSA*GSGWMNHWFDGVLY
Trigger: GTACAGCACCCCATCAAACCAGTGGTTCATCCAACCGCTACCCCAAGCACTGTTCCTTCTAGTCCATTTACGCTTCAGTCTGATCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074919.11
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000167542.2
ENSMUST00000170854.2
ENSMUST00000172018.8
CDS-3UTR CAA 90 bp ACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTATCCGCAACATTTTGTTaGGTGGTGAAGGATCTGCGG +
Preference number: 5 (lower is better)
Translates to: TDPVPLSFHLPSLTVHSLSATFC*VVKDLR
Trigger: CCGCAGATCCTTCACCACCAAACAAAATGTTGCGGA...TAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS GCA 90 bp TCAGCAGTTACAGGCTGCTGTGTAGCCGAATGTGACACTGGTCCTTaGTTAACTACTGGAGTACTAACCTTTGGCTGGGATGAAACAGGT +
Preference number: 5 (lower is better)
Translates to: SAVTGCCVAECDTGP*LTTGVLTFGWDETG
Trigger: ACCTGTTTCATCCCAGCCAAAGGTTAGTACTCCAGTAGTTAAGCAAGGACCAGTGTCACATTCGGCTACACAGCAGCCTGTAACTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000165854.8
ENSMUST00000167020.8
ENSMUST00000171042.8
ENSMUST00000171486.8
ENSMUST00000172018.8
CDS GCA 90 bp TGGTTTGATGGGGTGCTGTACTGGCGTAGAGCTACTGTGAGTCTCTaGTCTTGGCAGTCTGTAGTCTTTGTCATTGTGTCTGCTTGTTTG +
Preference number: 5 (lower is better)
Translates to: WFDGVLYWRRATVSL*SWQSVVFVIVSACL
Trigger: CAAACAAGCAGACACAATGACAAAGACTACAGACTGCCAAGAGCAGAGACTCACAGTAGCTCTACGCCAGTACAGCACCCCATCAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000074919.11
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000170854.2
ENSMUST00000172018.8
CDS CCA 90 bp GATGGGGTGCTGTACTGGCGTAGAGCTACTGTGAGTCTCTGCTCTTaGCAGTCTGTAGTCTTTGTCATTGTGTCTGCTTGTTTGAGACAA +
Preference number: 5 (lower is better)
Translates to: DGVLYWRRATVSLCS*QSVVFVIVSACLRQ
Trigger: TTGTCTCAAACAAGCAGACACAATGACAAAGACTACAGACTGCCAAGAGCAGAGACTCACAGTAGCTCTACGCCAGTACAGCACCCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074919.11
ENSMUST00000165854.8
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000170854.2
ENSMUST00000172018.8
CDS-3UTR CAA 90 bp GACTCTCACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATCTGCTCTCGCAAAGTaGCTTGAATTTCACATACTC +
Preference number: 5 (lower is better)
Translates to: DSHRPRPLVISFAQLNGPSALAK*LEFHIL
Trigger: GAGTATGTGAAATTCAAGCAACTTTGCGAGAGCAGA...TGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGTGAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp ACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTAGAGGTGTGCTTATTCTaGGAGACACATAGGATCTTG +
Preference number: 5 (lower is better)
Translates to: TDPVPLSFHLPSLTVHSLEVCLF*ETHRIL
Trigger: CAAGATCCTATGTGTCTCCAAGAATAAGCACACCTC...TAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp AACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGTGTCATGGCTCTGCTGCTaGTCAGCAGTTACAGGCTGC +
Preference number: 5 (lower is better)
Translates to: NISLQNKWSSTALDQVQVSWLCC*SAVTGC
Trigger: GCAGCCTGTAACTGCTGACAAGCAGCAGAGCCATGA...CACTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp AGCAGCACTGCTCTTGATCAGGTGCAAGTGCTGATCAGTTGTCTCATGATATTTGCATCGCTGGAATGCTaGTCTTCCATTCCACTGGTG +
Preference number: 5 (lower is better)
Translates to: SSTALDQVQVLISCLMIFASLEC*SSIPLV
Trigger: CACCAGTGGAATGGAAGACAAGCATTCCAGCGATGC...AAATATCATGAGACAACTGATCAGCACTTGCACCTGATCAAGAGCAGTGCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp GTGGGTTATGCTTGCTCACTGCGACTTCCAGCTACTGTACATAGGAATGACAAGGTGGGTGTAGGCAGTTaGGATAAAGTAGATGCTCCA +
Preference number: 5 (lower is better)
Translates to: VGYACSLRLPATVHRNDKVGVGS*DKVDAP
Trigger: TGGAGCATCTACTTTATCCAAACTGCCTACACCCAC...CTTGTCATTCCTATGTACAGTAGCTGGAAGTCGCAGTGAGCAAGCATAACCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp ACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTATTTCAAGCCACTCTTTaGGTTTCTCCCACTGTGAAA +
Preference number: 5 (lower is better)
Translates to: TDPVPLSFHLPSLTVHSLFQATL*VSPTVK
Trigger: TTTCACAGTGGGAGAAACCAAAAGAGTGGCTTGAAA...TAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp ACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTAGTAATGGAGGTATTGTaGATTGTGGAACGGGAGAAA +
Preference number: 5 (lower is better)
Translates to: TDPVPLSFHLPSLTVHSLVMEVL*IVEREK
Trigger: TTTCTCCCGTTCCACAATCAACAATACCTCCATTAC...TAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp GTGGGTTATGCTTGCTCACTGCGACTTCCAGCTACTGTACATAGGAATGACAAGGAGGTGTGCTTATTCTaGGAGACACATAGGATCTTG +
Preference number: 5 (lower is better)
Translates to: VGYACSLRLPATVHRNDKEVCLF*ETHRIL
Trigger: CAAGATCCTATGTGTCTCCAAGAATAAGCACACCTC...CTTGTCATTCCTATGTACAGTAGCTGGAAGTCGCAGTGAGCAAGCATAACCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp TTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGCTCAAAATGTTATGACTCATGGCTCTGCTGCTaGTCAGCAGTTACAGGCTGC +
Preference number: 5 (lower is better)
Translates to: LPSLTVHSLLKCSSKCYDSWLCC*SAVTGC
Trigger: GCAGCCTGTAACTGCTGACAAGCAGCAGAGCCATGA...GTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp ACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATGGCTTCCCAGCATCGCTGGAATGCTaGTCTTCCATTCCACTGGTG +
Preference number: 5 (lower is better)
Translates to: TSALISFRCLSSVTHGFPASLEC*SSIPLV
Trigger: CACCAGTGGAATGGAAGACAAGCATTCCAGCGATGC...TGGGAAGCCATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS CCA 90 bp AGTGAGGTGATGTTGAAAGCAGATGGTCCAGCAGTAAGAAACTTGTaGATGATAGACTGCAGGGAAGCTTGTGTTACAGCTGCTGTAAGA +
Preference number: 5 (lower is better)
Translates to: SEVMLKADGPAVRNL*MIDCREACVTAAVR
Trigger: TCTTACAGCAGCTGTAACACAAGCTTCCCTGCAGTCTATCATCCACAAGTTTCTTACTGCTGGACCATCTGCTTTCAACATCACCTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp GTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCACTAGTGGCTGTTGCTaGCATCACCTCTCTTCTGTA +
Preference number: 5 (lower is better)
Translates to: VPLSFHLPSLTVHSLLKCTSGCC*HHLSSV
Trigger: TACAGAAGAGAGGTGATGCAAGCAACAGCCACTAGT...GCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp GTGGGTTATGCTTGCTCACTGCGACTTCCAGCTACTGTACATAGGAATGACAAGTGCAAGAATGTGATATaGATTTGTCTCCTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: VGYACSLRLPATVHRNDKCKNVI*ICLLEQ
Trigger: CTGCTCCAGGAGACAAATCAATATCACATTCTTGCA...CTTGTCATTCCTATGTACAGTAGCTGGAAGTCGCAGTGAGCAAGCATAACCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp AGCAGCACTGCTCTTGATCAGGTGCAAGTGCTGATCAGTTGTCTCATGATATTTCCAGCAGTAAGAAACTaGTGGATGATAGACTGCAGG +
Preference number: 5 (lower is better)
Translates to: SSTALDQVQVLISCLMIFPAVRN*WMIDCR
Trigger: CCTGCAGTCTATCATCCACAAGTTTCTTACTGCTGG...AAATATCATGAGACAACTGATCAGCACTTGCACCTGATCAAGAGCAGTGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp ACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTAGTACAACAGTTGCAGTaGATGCATTACTACTACAAG +
Preference number: 5 (lower is better)
Translates to: TDPVPLSFHLPSLTVHSLVQQLQ*MHYYYK
Trigger: CTTGTAGTAGTAATGCATCAACTGCAACTGTTGTAC...TAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp AGCAGCACTGCTCTTGATCAGGTGCAAGTGCTGATCAGTTGTCTCATGATATTTCTTCTTCACGCAATCTaGATGCCTGTTTCTCTGCGT +
Preference number: 5 (lower is better)
Translates to: SSTALDQVQVLISCLMIFLLHAI*MPVSLR
Trigger: ACGCAGAGAAACAGGCATCAAGATTGCGTGAAGAAG...AAATATCATGAGACAACTGATCAGCACTTGCACCTGATCAAGAGCAGTGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp GCTCTTGATCAGGTGCAAGTGCTGATCAGTTGTCTCATGATATTTGTACACTGCTGTGAGTCTCTGCTCTaGGCAGTCTGTAGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: ALDQVQVLISCLMIFVHCCESLL*AVCSLC
Trigger: ACAAAGACTACAGACTGCCAAGAGCAGAGACTCACA...GCAGTGTACAAATATCATGAGACAACTGATCAGCACTTGCACCTGATCAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS CCA 90 bp AGTGAGGTGATGTTGAAAGCAGATGGTCCAGCAGTAAGAAACTTGTaGATGATAGACTGCAGGGAAGCTTGTGTTACAGCTGCTTCATTT +
Preference number: 5 (lower is better)
Translates to: SEVMLKADGPAVRNL*MIDCREACVTAASF
Trigger: AAATGAAGCAGCTGTAACACAAGCTTCCCTGCAGTCTATCATCCACAAGTTTCTTACTGCTGGACCATCTGCTTTCAACATCACCTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000171486.8
ENSMUST00000172018.8
CDS-3UTR CAA 90 bp TTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGCTCAAAATGTTATGACTCCGCAACATTTTGTTaGGTGGTGAAGGATCTGCGG +
Preference number: 5 (lower is better)
Translates to: LPSLTVHSLLKCSSKCYDSATFC*VVKDLR
Trigger: CCGCAGATCCTTCACCACCAAACAAAATGTTGCGGA...GTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp AGCAGCACTGCTCTTGATCAGGTGCAAGTGCTGATCAGTTGTCTCATGATATTTGATCTCCGCAACATTTaGTTTGGTGGTGAAGGATCT +
Preference number: 5 (lower is better)
Translates to: SSTALDQVQVLISCLMIFDLRNI*FGGEGS
Trigger: AGATCCTTCACCACCAAACAAAATGTTGCGGAGATC...AAATATCATGAGACAACTGATCAGCACTTGCACCTGATCAAGAGCAGTGCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp AACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGTGACTAGTGGCTGTTGCTaGCATCACCTCTCTTCTGTA +
Preference number: 5 (lower is better)
Translates to: NISLQNKWSSTALDQVQVTSGCC*HHLSSV
Trigger: TACAGAAGAGAGGTGATGCAAGCAACAGCCACTAGT...CACTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp TGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATGAAACTAGTGGCTGTTGCTaGCATCACCTCTCTTCTGTA +
Preference number: 5 (lower is better)
Translates to: WIKSGQGTSEGMEHTGNETSGCC*HHLSSV
Trigger: TACAGAAGAGAGGTGATGCAAGCAACAGCCACTAGT...TTCATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp ACAGACCCCGTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTAGAATGTGATATTGATTaGTCTCCTGGAGCAGATTTT +
Preference number: 5 (lower is better)
Translates to: TDPVPLSFHLPSLTVHSLECDID*SPGADF
Trigger: AAAATCTGCTCCAGGAGACAAATCAATATCACATTC...TAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGACGGGGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092112.11
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp AACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGTGCCAGCAGTAAGAAACTaGTGGATGATAGACTGCAGG +
Preference number: 5 (lower is better)
Translates to: NISLQNKWSSTALDQVQVPAVRN*WMIDCR
Trigger: CCTGCAGTCTATCATCCACAAGTTTCTTACTGCTGG...CACTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp ACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATGGCTTCCCACCAGCAGTAAGAAACTaGTGGATGATAGACTGCAGG +
Preference number: 5 (lower is better)
Translates to: TSALISFRCLSSVTHGFPPAVRN*WMIDCR
Trigger: CCTGCAGTCTATCATCCACAAGTTTCTTACTGCTGG...TGGGAAGCCATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp AACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGTGATCAGTGAGGTGATGTaGAAAGCAGATGGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: NISLQNKWSSTALDQVQVISEVM*KADGPA
Trigger: TGCTGGACCATCTGCTTTCAACATCACCTCACTGAT...CACTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp CACTTCCTTGTATTTGAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTAATCAGTGAGGTGATGTaGAAAGCAGATGGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: HFLVFEQLMYFQHTCPAVISEVM*KADGPA
Trigger: TGCTGGACCATCTGCTTTCAACATCACCTCACTGAT...TACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATACAAGGAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp ACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATGGCTTCCCAATCAGTGAGGTGATGTaGAAAGCAGATGGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: TSALISFRCLSSVTHGFPISEVM*KADGPA
Trigger: TGCTGGACCATCTGCTTTCAACATCACCTCACTGAT...TGGGAAGCCATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp GTGGGTTATGCTTGCTCACTGCGACTTCCAGCTACTGTACATAGGAATGACAAGGTACAACAGTTGCAGTaGATGCATTACTACTACAAG +
Preference number: 5 (lower is better)
Translates to: VGYACSLRLPATVHRNDKVQQLQ*MHYYYK
Trigger: CTTGTAGTAGTAATGCATCAACTGCAACTGTTGTAC...CTTGTCATTCCTATGTACAGTAGCTGGAAGTCGCAGTGAGCAAGCATAACCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp CACTTCCTTGTATTTGAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTAGTCTGCAGGCCACCCTaGAACATGCTTTATGAGATT +
Preference number: 5 (lower is better)
Translates to: HFLVFEQLMYFQHTCPAVVCRPP*NMLYEI
Trigger: AATCTCATAAAGCATGTTCAAGGGTGGCCTGCAGAC...TACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATACAAGGAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp TGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATGAAGTGGGTGTAGGCAGTTaGGATAAAGTAGATGCTCCA +
Preference number: 5 (lower is better)
Translates to: WIKSGQGTSEGMEHTGNEVGVGS*DKVDAP
Trigger: TGGAGCATCTACTTTATCCAAACTGCCTACACCCAC...TTCATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS GCA 90 bp TGTGAGTCTCTGCTCTTGGCAGTCTGTAGTCTTTGTCATTGTGTCTaGTTGTTTGAGACAAAATATTCTGTGGGAGCAAACTACTGGCAT +
Preference number: 5 (lower is better)
Translates to: CESLLLAVCSLCHCV*LFETKYSVGANYWH
Trigger: ATGCCAGTAGTTTGCTCCCACAGAATATTTTGTCTCAAACAAGCAGACACAATGACAAAGACTACAGACTGCCAAGAGCAGAGACTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074919.11
ENSMUST00000165854.8
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000170854.2
ENSMUST00000172018.8
CDS CCA 90 bp GTAGTCTTTGTCATTGTGTCTGCTTGTTTGAGACAAAATATTCTGTaGGAGCAAACTACTGGCATCGCTGGAATGCTTGTCTTCCATTCC +
Preference number: 5 (lower is better)
Translates to: VVFVIVSACLRQNIL*EQTTGIAGMLVFHS
Trigger: GGAATGGAAGACAAGCATTCCAGCGATGCCAGTAGTTTGCTCCCACAGAATATTTTGTCTCAAACAAGCAGACACAATGACAAAGACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074919.11
ENSMUST00000165854.8
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000170854.2
ENSMUST00000172018.8
CDS-3UTR CAA 90 bp CAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCACAGACTCCGCAACATTTTGTTaGGTGGTGAAGGATCTGCGG +
Preference number: 5 (lower is better)
Translates to: QGFYKSILYLSPELTLTDSATFC*VVKDLR
Trigger: CCGCAGATCCTTCACCACCAAACAAAATGTTGCGGA...GTCTGTGAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp GTCCCCTTGTCATTTCATTTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCGGTGCATCTGAAGTTTaGCTTGGATTATTGCTTGGA +
Preference number: 5 (lower is better)
Translates to: VPLSFHLPSLTVHSLLKCGASEV*LGLLLG
Trigger: TCCAAGCAATAATCCAAGCAAAACTTCAGATGCACC...GCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAAATGAAATGACAAGGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp GCTCTTGATCAGGTGCAAGTGCTGATCAGTTGTCTCATGATATTTGTACACTGCTGCAAGAATGTGATATaGATTTGTCTCCTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: ALDQVQVLISCLMIFVHCCKNVI*ICLLEQ
Trigger: CTGCTCCAGGAGACAAATCAATATCACATTCTTGCA...GCAGTGTACAAATATCATGAGACAACTGATCAGCACTTGCACCTGATCAAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp ACATTTCAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCTCATGGCTCTGCTGCTaGTCAGCAGTTACAGGCTGC +
Preference number: 5 (lower is better)
Translates to: TFQGFYKSILYLSPELTLSWLCC*SAVTGC
Trigger: GCAGCCTGTAACTGCTGACAAGCAGCAGAGCCATGA...GAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTGAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp GCTCTTGATCAGGTGCAAGTGCTGATCAGTTGTCTCATGATATTTGTACACTGCTACTACAAGTATGATTaGGACCAGGTGATGGACTTC +
Preference number: 5 (lower is better)
Translates to: ALDQVQVLISCLMIFVHCYYKYD*DQVMDF
Trigger: GAAGTCCATCACCTGGTCCAAATCATACTTGTAGTA...GCAGTGTACAAATATCATGAGACAACTGATCAGCACTTGCACCTGATCAAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp AATAATTTATACAAACGTGGGTTATGCTTGCTCACTGCGACTTCCAGCTACTGTCTTCTTCACGCAATCTaGATGCCTGTTTCTCTGCGT +
Preference number: 5 (lower is better)
Translates to: NNLYKRGLCLLTATSSYCLLHAI*MPVSLR
Trigger: ACGCAGAGAAACAGGCATCAAGATTGCGTGAAGAAG...ACAGTAGCTGGAAGTCGCAGTGAGCAAGCATAACCCACGTTTGTATAAATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp AATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATGAAAACATATCTTCTTCACGCAATCTaGATGCCTGTTTCTCTGCGT +
Preference number: 5 (lower is better)
Translates to: NQAKGLQREWNIQEMKTYLLHAI*MPVSLR
Trigger: ACGCAGAGAAACAGGCATCAAGATTGCGTGAAGAAG...ATATGTTTTCATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp GTGGGTTATGCTTGCTCACTGCGACTTCCAGCTACTGTACATAGGAATGACAAGATTGTGTCTGCTTGTTaGAGACAAAATATTCTGTGG +
Preference number: 5 (lower is better)
Translates to: VGYACSLRLPATVHRNDKIVSAC*RQNILW
Trigger: CCACAGAATATTTTGTCTCAAACAAGCAGACACAAT...CTTGTCATTCCTATGTACAGTAGCTGGAAGTCGCAGTGAGCAAGCATAACCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS CCA 90 bp AGTGAGGTGATGTTGAAAGCAGATGGTCCAGCAGTAAGAAACTTGTaGATGATAGACTGCAGGGAAGCTTGTGTTACAGCTTCATTTATT +
Preference number: 5 (lower is better)
Translates to: SEVMLKADGPAVRNL*MIDCREACVTASFI
Trigger: AATAAATGAAGCTGTAACACAAGCTTCCCTGCAGTCTATCATCCACAAGTTTCTTACTGCTGGACCATCTGCTTTCAACATCACCTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167542.2
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp AAAATGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAAGATCTCCGCAACATTTaGTTTGGTGGTGAAGGATCT +
Preference number: 5 (lower is better)
Translates to: KMDKIRPRDFRGNGTYRKDLRNI*FGGEGS
Trigger: AGATCCTTCACCACCAAACAAAATGTTGCGGAGATC...TTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp ACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATGGCTTCCCAGGTGCATCTGAAGTTTaGCTTGGATTATTGCTTGGA +
Preference number: 5 (lower is better)
Translates to: TSALISFRCLSSVTHGFPGASEV*LGLLLG
Trigger: TCCAAGCAATAATCCAAGCAAAACTTCAGATGCACC...TGGGAAGCCATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp CCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGCTCAAAATGTTATGACTGGTTTCAAGCCACTCTTTaGGTTTCTCCCACTGTGAAA +
Preference number: 5 (lower is better)
Translates to: PSLTVHSLLKCSSKCYDWFQATL*VSPTVK
Trigger: TTTCACAGTGGGAGAAACCAAAAGAGTGGCTTGAAA...CCAGTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTTAAGCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp ACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATGGCTTCCCAGTAATGGAGGTATTGTaGATTGTGGAACGGGAGAAA +
Preference number: 5 (lower is better)
Translates to: TSALISFRCLSSVTHGFPVMEVL*IVEREK
Trigger: TTTCTCCCGTTCCACAATCAACAATACCTCCATTAC...TGGGAAGCCATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp CAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCACAGACGTCTGCAGGCCACCCTaGAACATGCTTTATGAGATT +
Preference number: 5 (lower is better)
Translates to: QGFYKSILYLSPELTLTDVCRPP*NMLYEI
Trigger: AATCTCATAAAGCATGTTCAAGGGTGGCCTGCAGAC...GTCTGTGAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp GAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGTCCATTCTCTCGCAAAGTTGCTaGAATTTCACATACTCGAAC +
Preference number: 5 (lower is better)
Translates to: EQLMYFQHTCPAVLLKSILSQSC*NFTYSN
Trigger: GTTCGAGTATGTGAAATTCAAGCAACTTTGCGAGAG...AATGGACTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp CCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGCTCAAAATGTTATGACTGGCTCTCGCAAAGTTGCTaGAATTTCACATACTCGAAC +
Preference number: 5 (lower is better)
Translates to: PSLTVHSLLKCSSKCYDWLSQSC*NFTYSN
Trigger: GTTCGAGTATGTGAAATTCAAGCAACTTTGCGAGAG...CCAGTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTTAAGCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp AACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGTGTCTGCTCTCGCAAAGTaGCTTGAATTTCACATACTC +
Preference number: 5 (lower is better)
Translates to: NISLQNKWSSTALDQVQVSALAK*LEFHIL
Trigger: GAGTATGTGAAATTCAAGCAACTTTGCGAGAGCAGA...CACTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp AGCAGCACTGCTCTTGATCAGGTGCAAGTGCTGATCAGTTGTCTCATGATATTTGAATGTGATATTGATTaGTCTCCTGGAGCAGATTCT +
Preference number: 5 (lower is better)
Translates to: SSTALDQVQVLISCLMIFECDID*SPGADS
Trigger: AGAATCTGCTCCAGGAGACAAATCAATATCACATTC...AAATATCATGAGACAACTGATCAGCACTTGCACCTGATCAAGAGCAGTGCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS GCA 90 bp TTGAAAGCAGATGGTCCAGCAGTAAGAAACTTGTGGATGATAGACTaGAGGGAAGCTTGTGTTACAGCTGCTGTAAGAACTTCATTTATT +
Preference number: 5 (lower is better)
Translates to: LKADGPAVRNLWMID*REACVTAAVRTSFI
Trigger: AATAAATGAAGTTCTTACAGCAGCTGTAACACAAGCTTCCCTGCAGTCTATCATCCACAAGTTTCTTACTGCTGGACCATCTGCTTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS GCA 90 bp TTGAAAGCAGATGGTCCAGCAGTAAGAAACTTGTGGATGATAGACTaGAGGGAAGCTTGTGTTACAGCTTCATTTATTTTGGATATGTCC +
Preference number: 5 (lower is better)
Translates to: LKADGPAVRNLWMID*REACVTASFILDMS
Trigger: GGACATATCCAAAATAAATGAAGCTGTAACACAAGCTTCCCTGCAGTCTATCATCCACAAGTTTCTTACTGCTGGACCATCTGCTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167542.2
ENSMUST00000171042.8
CDS GCA 90 bp TTGAAAGCAGATGGTCCAGCAGTAAGAAACTTGTGGATGATAGACTaGAGGGAAGCTTGTGTTACAGCTGCTTCATTTATTTTGGATATG +
Preference number: 5 (lower is better)
Translates to: LKADGPAVRNLWMID*REACVTAASFILDM
Trigger: CATATCCAAAATAAATGAAGCAGCTGTAACACAAGCTTCCCTGCAGTCTATCATCCACAAGTTTCTTACTGCTGGACCATCTGCTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000171486.8
ENSMUST00000172018.8
CDS-3UTR CAA 90 bp ACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGTCCATTCTTAGGTGAAAATTTTCAAGCCACTCTTTaGGTTTCTCCCACTGTGAAA +
Preference number: 5 (lower is better)
Translates to: TFSTLAQQYFLSPFLGENFQATL*VSPTVK
Trigger: TTTCACAGTGGGAGAAACCAAAAGAGTGGCTTGAAA...ATTTTCACCTAAGAATGGACTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp AATAATTTATACAAACGTGGGTTATGCTTGCTCACTGCGACTTCCAGCTACTGTTGCAAGAATGTGATATaGATTTGTCTCCTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: NNLYKRGLCLLTATSSYCCKNVI*ICLLEQ
Trigger: CTGCTCCAGGAGACAAATCAATATCACATTCTTGCA...ACAGTAGCTGGAAGTCGCAGTGAGCAAGCATAACCCACGTTTGTATAAATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp TTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGCTCAAAATGTTATGACTGCAAGAATGTGATATaGATTTGTCTCCTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: LPSLTVHSLLKCSSKCYDCKNVI*ICLLEQ
Trigger: CTGCTCCAGGAGACAAATCAATATCACATTCTTGCA...GTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp TATTTAGCCACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATCCAGCAGTAAGAAACTaGTGGATGATAGACTGCAGG +
Preference number: 5 (lower is better)
Translates to: YLATSALISFRCLSSVTHPAVRN*WMIDCR
Trigger: CCTGCAGTCTATCATCCACAAGTTTCTTACTGCTGG...ATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGTGGCTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp TATTTGTACACTGCTCATAAGGTTCAAAATCGTATCCTCAGACACAGATCACCTGAGGTGTGCTTATTCTaGGAGACACATAGGATCTTG +
Preference number: 5 (lower is better)
Translates to: YLYTAHKVQNRILRHRSPEVCLF*ETHRIL
Trigger: CAAGATCCTATGTGTCTCCAAGAATAAGCACACCTC...AGGTGATCTGTGTCTGAGGATACGATTTTGAACCTTATGAGCAGTGTACAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp GAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGTCCATTGTACAACAGTTGCAGTaGATGCATTACTACTACAAG +
Preference number: 5 (lower is better)
Translates to: EQLMYFQHTCPAVLLKSIVQQLQ*MHYYYK
Trigger: CTTGTAGTAGTAATGCATCAACTGCAACTGTTGTAC...AATGGACTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp CCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGCTCAAAATGTTATGACTGGGTACAACAGTTGCAGTaGATGCATTACTACTACAAG +
Preference number: 5 (lower is better)
Translates to: PSLTVHSLLKCSSKCYDWVQQLQ*MHYYYK
Trigger: CTTGTAGTAGTAATGCATCAACTGCAACTGTTGTAC...CCAGTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTTAAGCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp TTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGCTCAAAATGTTATGACTCTGTGGTACAACAGTaGCAGTTGATGCATTACTAC +
Preference number: 5 (lower is better)
Translates to: LPSLTVHSLLKCSSKCYDSVVQQ*QLMHYY
Trigger: GTAGTAATGCATCAACTGCAACTGTTGTACCACAGA...GTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp GTATTTGAGCAGTTAATGTACTTTCAGCACACTTGCCCAGCAGTACTTCTTAAGTCTGTGGTACAACAGTaGCAGTTGATGCATTACTAC +
Preference number: 5 (lower is better)
Translates to: VFEQLMYFQHTCPAVLLKSVVQQ*QLMHYY
Trigger: GTAGTAATGCATCAACTGCAACTGTTGTACCACAGA...CTTAAGAAGTACTGCTGGGCAAGTGTGCTGAAAGTACATTAACTGCTCAAATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp AAAACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGTCTGTGGTACAACAGTaGCAGTTGATGCATTACTAC +
Preference number: 5 (lower is better)
Translates to: KTYLCKTNGAALLLIRCKSVVQQ*QLMHYY
Trigger: GTAGTAATGCATCAACTGCAACTGTTGTACCACAGA...CTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp TATTTAGCCACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATGTCTGCAGGCCACCCTaGAACATGCTTTATGAGATT +
Preference number: 5 (lower is better)
Translates to: YLATSALISFRCLSSVTHVCRPP*NMLYEI
Trigger: AATCTCATAAAGCATGTTCAAGGGTGGCCTGCAGAC...ATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGTGGCTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp AAATGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATCTCTCGCAAAGTTGCTaGAATTTCACATACTCGAAC +
Preference number: 5 (lower is better)
Translates to: KWIKSGQGTSEGMEHTGNLSQSC*NFTYSN
Trigger: GTTCGAGTATGTGAAATTCAAGCAACTTTGCGAGAG...ATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp TATTTAGCCACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATTGTGAGTCTCTGCTCTaGGCAGTCTGTAGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: YLATSALISFRCLSSVTHCESLL*AVCSLC
Trigger: ACAAAGACTACAGACTGCCAAGAGCAGAGACTCACA...ATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGTGGCTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp TGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATGAACATCAAATGATTTCTTaGGCTGGTGATCAGACTGAA +
Preference number: 5 (lower is better)
Translates to: WIKSGQGTSEGMEHTGNEHQMIS*AGDQTE
Trigger: TTCAGTCTGATCACCAGCCAAAGAAATCATTTGATG...TTCATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS CCA 90 bp TTTAACTCAGTACATATTTCTGACATATGTACACTTCCCATATTATaGGCTTCTTCACGCAATCTTGATGCCTGTTTCTCTGCGTGGTCT +
Preference number: 5 (lower is better)
Translates to: FNSVHISDICTLPIL*ASSRNLDACFSAWS
Trigger: AGACCACGCAGAGAAACAGGCATCAAGATTGCGTGAAGAAGCCCATAATATGGGAAGTGTACATATGTCAGAAATATGTACTGAGTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
ENSMUST00000171486.8
ENSMUST00000172018.8
CDS-3UTR CAA 90 bp TATTTGTACACTGCTCATAAGGTTCAAAATCGTATCCTCAGACACAGATCACCTGGTGCATCTGAAGTTTaGCTTGGATTATTGCTTGGA +
Preference number: 5 (lower is better)
Translates to: YLYTAHKVQNRILRHRSPGASEV*LGLLLG
Trigger: TCCAAGCAATAATCCAAGCAAAACTTCAGATGCACC...AGGTGATCTGTGTCTGAGGATACGATTTTGAACCTTATGAGCAGTGTACAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp AAATGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATAAGATGTGGAAGGAGTaGTGCAAGAATGTGATATTG +
Preference number: 5 (lower is better)
Translates to: KWIKSGQGTSEGMEHTGNKMWKE*CKNVIL
Trigger: CAATATCACATTCTTGCACAACTCCTTCCACATCTT...ATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp TTGCCCAGCTTAACGGTCCATAGTCTACTTAAATGCAGCTCAAAATGTTATGACAAGATGTGGAAGGAGTaGTGCAAGAATGTGATATTG +
Preference number: 5 (lower is better)
Translates to: LPSLTVHSLLKCSSKCYDKMWKE*CKNVIL
Trigger: CAATATCACATTCTTGCACAACTCCTTCCACATCTT...GTCATAACATTTTGAGCTGCATTTAAGTAGACTATGGACCGTTAAGCTGGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp TATTTGTACACTGCTCATAAGGTTCAAAATCGTATCCTCAGACACAGATCACCTGTAATGGAGGTATTGTaGATTGTGGAACGGGAGAAA +
Preference number: 5 (lower is better)
Translates to: YLYTAHKVQNRILRHRSPVMEVL*IVEREK
Trigger: TTTCTCCCGTTCCACAATCAACAATACCTCCATTAC...AGGTGATCTGTGTCTGAGGATACGATTTTGAACCTTATGAGCAGTGTACAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp ACATTTCAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCATCAGTGAGGTGATGTaGAAAGCAGATGGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: TFQGFYKSILYLSPELTLISEVM*KADGPA
Trigger: TGCTGGACCATCTGCTTTCAACATCACCTCACTGAT...GAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTGAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp CAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCACAGACTACTACAAGTATGATTaGGACCAGGTGATGGACTTC +
Preference number: 5 (lower is better)
Translates to: QGFYKSILYLSPELTLTDYYKYD*DQVMDF
Trigger: GAAGTCCATCACCTGGTCCAAATCATACTTGTAGTA...GTCTGTGAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp ACATTTCAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCCTTCTTCACGCAATCTaGATGCCTGTTTCTCTGCGT +
Preference number: 5 (lower is better)
Translates to: TFQGFYKSILYLSPELTLLLHAI*MPVSLR
Trigger: ACGCAGAGAAACAGGCATCAAGATTGCGTGAAGAAG...GAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTGAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp AACATATCTTTGCAAAACAAATGGAGCAGCACTGCTCTTGATCAGGTGCAAGTGATTGTGTCTGCTTGTTaGAGACAAAATATTCTGTGG +
Preference number: 5 (lower is better)
Translates to: NISLQNKWSSTALDQVQVIVSAC*RQNILW
Trigger: CCACAGAATATTTTGTCTCAAACAAGCAGACACAAT...CACTTGCACCTGATCAAGAGCAGTGCTGCTCCATTTGTTTTGCAAAGATATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp AAAATGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAACATCAAATGATTTCTTaGGCTGGTGATCAGACTGAA +
Preference number: 5 (lower is better)
Translates to: KMDKIRPRDFRGNGTYRKHQMIS*AGDQTE
Trigger: TTCAGTCTGATCACCAGCCAAAGAAATCATTTGATG...TTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp AAATGGATAAAATCAGGCCAAGGGACTTCAGAGGGAATGGAACATACAGGAAATGAATGTGATATTGATTaGTCTCCTGGAGCAGATTCT +
Preference number: 5 (lower is better)
Translates to: KWIKSGQGTSEGMEHTGNECDID*SPGADS
Trigger: AGAATCTGCTCCAGGAGACAAATCAATATCACATTC...ATTTCCTGTATGTTCCATTCCCTCTGAAGTCCCTTGGCCTGATTTTATCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000074919.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp AGTGCTGATCAGTTGTCTCATGATATTTGTACACTGCTCATAAGGTTCAAAATCGGTGCATCTGAAGTTTaGCTTGGATTATTGCTTGGA +
Preference number: 5 (lower is better)
Translates to: SADQLSHDICTLLIRFKIGASEV*LGLLLG
Trigger: TCCAAGCAATAATCCAAGCAAAACTTCAGATGCACC...GATTTTGAACCTTATGAGCAGTGTACAAATATCATGAGACAACTGATCAGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp TATTTGTACACTGCTCATAAGGTTCAAAATCGTATCCTCAGACACAGATCACCTAAGATGTGGAAGGAGTaGTGCAAGAATGTGATATTG +
Preference number: 5 (lower is better)
Translates to: YLYTAHKVQNRILRHRSPKMWKE*CKNVIL
Trigger: CAATATCACATTCTTGCACAACTCCTTCCACATCTT...AGGTGATCTGTGTCTGAGGATACGATTTTGAACCTTATGAGCAGTGTACAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp GATCTAGAAGAAAACATCTGCCCCAACAATGCAATTCTTAAGTCAGATGTTACATACTACAAGTATGATTaGGACCAGGTGATGGACTTC +
Preference number: 5 (lower is better)
Translates to: DLEENICPNNAILKSDVTYYKYD*DQVMDF
Trigger: GAAGTCCATCACCTGGTCCAAATCATACTTGTAGTA...TGTAACATCTGACTTAAGAATTGCATTGTTGGGGCAGATGTTTTCTTCTAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp TATTTAGCCACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATTCTGTGGTACAACAGTaGCAGTTGATGCATTACTAC +
Preference number: 5 (lower is better)
Translates to: YLATSALISFRCLSSVTHSVVQQ*QLMHYY
Trigger: GTAGTAATGCATCAACTGCAACTGTTGTACCACAGA...ATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGTGGCTAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp GCTGATCAGTTGTCTCATGATATTTGTACACTGCTCATAAGGTTCAAAATCGTATCTGCTCTCGCAAAGTaGCTTGAATTTCACATACTC +
Preference number: 5 (lower is better)
Translates to: ADQLSHDICTLLIRFKIVSALAK*LEFHIL
Trigger: GAGTATGTGAAATTCAAGCAACTTTGCGAGAGCAGA...TACGATTTTGAACCTTATGAGCAGTGTACAAATATCATGAGACAACTGATCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp AGTGCTGATCAGTTGTCTCATGATATTTGTACACTGCTCATAAGGTTCAAAATCTCTGCTCTCGCAAAGTaGCTTGAATTTCACATACTC +
Preference number: 5 (lower is better)
Translates to: SADQLSHDICTLLIRFKISALAK*LEFHIL
Trigger: GAGTATGTGAAATTCAAGCAACTTTGCGAGAGCAGA...GATTTTGAACCTTATGAGCAGTGTACAAATATCATGAGACAACTGATCAGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS-3UTR CAA 90 bp CAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCACAGACGAATGTGATATTGATTaGTCTCCTGGAGCAGATTTT +
Preference number: 5 (lower is better)
Translates to: QGFYKSILYLSPELTLTDECDID*SPGADF
Trigger: AAAATCTGCTCCAGGAGACAAATCAATATCACATTC...GTCTGTGAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092112.11
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp TATTTAGCCACCTCAGCATTGATTAGTTTCAGATGTCTAAGCTCTGTTACACATAAGATGTGGAAGGAGTaGTGCAAGAATGTGATATTG +
Preference number: 5 (lower is better)
Translates to: YLATSALISFRCLSSVTHKMWKE*CKNVIL
Trigger: CAATATCACATTCTTGCACAACTCCTTCCACATCTT...ATGTGTAACAGAGCTTAGACATCTGAAACTAATCAATGCTGAGGTGGCTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS-3UTR CAA 90 bp ACATTTCAAGGGTTTTACAAATCAATCTTGTATCTTTCCCCTGAATTGACTCTCCTCTCGCAAAGTTGCTaGAATTTCACATACTCGAAC +
Preference number: 5 (lower is better)
Translates to: TFQGFYKSILYLSPELTLLSQSC*NFTYSN
Trigger: GTTCGAGTATGTGAAATTCAAGCAACTTTGCGAGAG...GAGAGTCAATTCAGGGGAAAGATACAAGATTGATTTGTAAAACCCTTGAAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
CDS TCA 72 bp GGACTAGAAGGAACAGTGCTTGGGGTAGCGGTTGGATaGACCACTGGTTTGATGGGGTGCTGTACTGGCGTA +
Preference number: 6 (lower is better)
Translates to: GLEGTVLGVAVG*TTGLMGCCTGV
Trigger: TACGCCAGTACAGCACCCCATCAAACCAGTGGTTCATCCAACCGCTACCCCAAGCACTGTTCCTTCTAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000074919.11
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000167542.2
ENSMUST00000170854.2
ENSMUST00000172018.8
CDS CCA 72 bp GGTTGGATGAACCACTGGTTTGATGGGGTGCTGTACTaGCGTAGAGCTACTGTGAGTCTCTGCTCTTGGCAG +
Preference number: 6 (lower is better)
Translates to: GWMNHWFDGVLY*RRATVSLCSWQ
Trigger: CTGCCAAGAGCAGAGACTCACAGTAGCTCTACGCCAGTACAGCACCCCATCAAACCAGTGGTTCATCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000074919.11
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000170854.2
ENSMUST00000172018.8
CDS CCA 72 bp AGGAACAGTGCTTGGGGTAGCGGTTGGATGAACCACTaGTTTGATGGGGTGCTGTACTGGCGTAGAGCTACT +
Preference number: 6 (lower is better)
Translates to: RNSAWGSGWMNH*FDGVLYWRRAT
Trigger: AGTAGCTCTACGCCAGTACAGCACCCCATCAAACCAGTGGTTCATCCAACCGCTACCCCAAGCACTGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000074919.11
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000167542.2
ENSMUST00000170854.2
ENSMUST00000172018.8
CDS GCA 72 bp GGGGTGCTGTACTGGCGTAGAGCTACTGTGAGTCTCTaGTCTTGGCAGTCTGTAGTCTTTGTCATTGTGTCT +
Preference number: 6 (lower is better)
Translates to: GVLYWRRATVSL*SWQSVVFVIVS
Trigger: AGACACAATGACAAAGACTACAGACTGCCAAGAGCAGAGACTCACAGTAGCTCTACGCCAGTACAGCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074919.11
ENSMUST00000165854.8
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000170854.2
ENSMUST00000172018.8
CDS CAA 72 bp AGACTTCGAGGAGAAACAGGATCATGGCTCTGCTGCTaGTCAGCAGTTACAGGCTGCTGTGTAGCCGAATGT +
Preference number: 6 (lower is better)
Translates to: RLRGETGSWLCC*SAVTGCCVAEC
Trigger: ACATTCGGCTACACAGCAGCCTGTAACTGCTGACAAGCAGCAGAGCCATGATCCTGTTTCTCCTCGAAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000165854.8
ENSMUST00000167020.8
ENSMUST00000171042.8
ENSMUST00000171486.8
ENSMUST00000172018.8
CDS CAA 72 bp TTCTGTGGGAGCAAACTACTGGCATCGCTGGAATGCTaGTCTTCCATTCCACTGGTGAACCCACTAGTGGCT +
Preference number: 6 (lower is better)
Translates to: FCGSKLLASLEC*SSIPLVNPLVA
Trigger: AGCCACTAGTGGGTTCACCAGTGGAATGGAAGACAAGCATTCCAGCGATGCCAGTAGTTTGCTCCCACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074919.11
ENSMUST00000165854.8
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000170854.2
ENSMUST00000172018.8
CDS TCA 72 bp GGGGATGAAGCATCAGATGTCAGAGACATTGGAGACTaGTTAGATGGCTGGGCTTGTGTAGAAAGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: GDEASDVRDIGD*LDGWACVESWA
Trigger: TGCCCAGCTTTCTACACAAGCCCAGCCATCTAATCAGTCTCCAATGTCTCTGACATCTGATGCTTCATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000165854.8
ENSMUST00000167020.8
ENSMUST00000167542.2
ENSMUST00000171042.8
ENSMUST00000171486.8
ENSMUST00000172018.8
CDS CCA 72 bp AGACTGAAGCGTAAATGGACTAGAAGGAACAGTGCTTaGGGTAGCGGTTGGATGAACCACTGGTTTGATGGG +
Preference number: 6 (lower is better)
Translates to: RLKRKWTRRNSA*GSGWMNHWFDG
Trigger: CCCATCAAACCAGTGGTTCATCCAACCGCTACCCCAAGCACTGTTCCTTCTAGTCCATTTACGCTTCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074919.11
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000167542.2
ENSMUST00000170854.2
ENSMUST00000172018.8
CDS TCA 72 bp CTTGTCAGCAGTTACAGGCTGCTGTGTAGCCGAATGTaGCACTGGTCCTTGCTTAACTACTGGAGTACTAAC +
Preference number: 6 (lower is better)
Translates to: LVSSYRLLCSRM*HWSLLNYWSTN
Trigger: GTTAGTACTCCAGTAGTTAAGCAAGGACCAGTGTCACATTCGGCTACACAGCAGCCTGTAACTGCTGACAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000165854.8
ENSMUST00000167020.8
ENSMUST00000171042.8
ENSMUST00000171486.8
ENSMUST00000172018.8
CDS GCA 72 bp ATATTCTGTGGGAGCAAACTACTGGCATCGCTGGAATaGTTGTCTTCCATTCCACTGGTGAACCCACTAGTG +
Preference number: 6 (lower is better)
Translates to: IFCGSKLLASLE*LSSIPLVNPLV
Trigger: CACTAGTGGGTTCACCAGTGGAATGGAAGACAAGCATTCCAGCGATGCCAGTAGTTTGCTCCCACAGAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074919.11
ENSMUST00000165854.8
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000170854.2
ENSMUST00000172018.8
CDS CAA 90 bp GAGGCTGAAGATGTGGAAGGAGTTGTGCAAGAATGTGATATTGATTaGTCTCCTGGAGCAGATTTTCCACTGGTGAACCCACTAGTGGCT +
Preference number: 6 (lower is better)
Translates to: EAEDVEGVVQECDID*SPGADFPLVNPLVA
Trigger: AGCCACTAGTGGGTTCACCAGTGGAAAATCTGCTCCAGGAGACAAATCAATATCACATTCTTGCACAACTCCTTCCACATCTTCAGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092112.11
ENSMUST00000171042.8
ENSMUST00000171486.8
CDS CAA 90 bp ATCAGTGAGGTGATGTTGAAAGCAGATGGTCCAGCAGTAAGAAACTaGTGGATGATAGACTGCAGGGAAGCTTGTGTTACAGCTGCTGTA +
Preference number: 6 (lower is better)
Translates to: ISEVMLKADGPAVRN*WMIDCREACVTAAV
Trigger: TACAGCAGCTGTAACACAAGCTTCCCTGCAGTCTATCATCCACAAGTTTCTTACTGCTGGACCATCTGCTTTCAACATCACCTCACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS CAA 90 bp CTCTGCTCTTGGCAGTCTGTAGTCTTTGTCATTGTGTCTGCTTGTTaGAGACAAAATATTCTGTGGGAGCAAACTACTGGCATCGCTGGA +
Preference number: 6 (lower is better)
Translates to: LCSWQSVVFVIVSAC*RQNILWEQTTGIAG
Trigger: TCCAGCGATGCCAGTAGTTTGCTCCCACAGAATATTTTGTCTCAAACAAGCAGACACAATGACAAAGACTACAGACTGCCAAGAGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074919.11
ENSMUST00000165854.8
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000170854.2
ENSMUST00000172018.8
CDS CAA 90 bp GAGTCTCTGCTCTTGGCAGTCTGTAGTCTTTGTCATTGTGTCTGCTaGTTTGAGACAAAATATTCTGTGGGAGCAAACTACTGGCATCGC +
Preference number: 6 (lower is better)
Translates to: ESLLLAVCSLCHCVC*FETKYSVGANYWHR
Trigger: GCGATGCCAGTAGTTTGCTCCCACAGAATATTTTGTCTCAAACAAGCAGACACAATGACAAAGACTACAGACTGCCAAGAGCAGAGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074919.11
ENSMUST00000165854.8
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000170854.2
ENSMUST00000172018.8
CDS CAA 90 bp ATCAGTGAGGTGATGTTGAAAGCAGATGGTCCAGCAGTAAGAAACTaGTGGATGATAGACTGCAGGGAAGCTTGTGTTACAGCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: ISEVMLKADGPAVRN*WMIDCREACVTAAS
Trigger: TGAAGCAGCTGTAACACAAGCTTCCCTGCAGTCTATCATCCACAAGTTTCTTACTGCTGGACCATCTGCTTTCAACATCACCTCACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000171486.8
ENSMUST00000172018.8
CDS TCA 72 bp TTCATGTCTGTGATCACCACTACTGGGGTGACTCTTTaGAGAATACTTAAGTGCCTGGAAAGGCTGAGAGTC +
Preference number: 6 (lower is better)
Translates to: FMSVITTTGVTL*RILKCLERLRV
Trigger: GACTCTCAGCCTTTCCAGGCACTTAAGTATTCTTCAAAGAGTCACCCCAGTAGTGGTGATCACAGACATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS TCA 72 bp AGGACTATTAGATCTCCGCAACATTTTGTTTGGTGGTaGAGGATCTGCGGCGTCTCGCATCTTTTCATGTCT +
Preference number: 6 (lower is better)
Translates to: RTIRSPQHFVWW*RICGVSHLFMS
Trigger: AGACATGAAAAGATGCGAGACGCCGCAGATCCTTCACCACCAAACAAAATGTTGCGGAGATCTAATAGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000168446.8
CDS GCA 72 bp GATGGTCCAGCAGTAAGAAACTTGTGGATGATAGACTaGAGGGAAGCTTGTGTTACAGCTGCTGTAAGAACT +
Preference number: 6 (lower is better)
Translates to: DGPAVRNLWMID*REACVTAAVRT
Trigger: AGTTCTTACAGCAGCTGTAACACAAGCTTCCCTGCAGTCTATCATCCACAAGTTTCTTACTGCTGGACCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS CAA 90 bp GTGGTACAACAGTTGCAGTTGATGCATTACTACTACAAGTATGATTaGGACCAGGTGATGGACTTCTCTGGCTACTTAAGCGCTGAAGAC +
Preference number: 6 (lower is better)
Translates to: VVQQLQLMHYYYKYD*DQVMDFSGYLSAED
Trigger: GTCTTCAGCGCTTAAGTAGCCAGAGAAGTCCATCACCTGGTCCAAATCATACTTGTAGTAGTAATGCATCAACTGCAACTGTTGTACCAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
ENSMUST00000171486.8
CDS CAA 90 bp GGCCAGAGGCTGAAGATGTGGAAGGAGTTGTGCAAGAATGTGATATaGATTTGTCTCCTGGAGCAGATTCTTTTCTCTCTGTTTTCTGTG +
Preference number: 6 (lower is better)
Translates to: GQRLKMWKELCKNVI*ICLLEQILFSLFSV
Trigger: CACAGAAAACAGAGAGAAAAGAATCTGCTCCAGGAGACAAATCAATATCACATTCTTGCACAACTCCTTCCACATCTTCAGCCTCTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000074919.11
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000167542.2
ENSMUST00000172018.8
CDS CAA 90 bp GGCCAGAGGCTGAAGATGTGGAAGGAGTTGTGCAAGAATGTGATATaGATTTGTCTCCTGGAGCAGATTCTAAATGAAAGGAAGAGAAGG +
Preference number: 6 (lower is better)
Translates to: GQRLKMWKELCKNVI*ICLLEQILNERKRR
Trigger: CCTTCTCTTCCTTTCATTTAGAATCTGCTCCAGGAGACAAATCAATATCACATTCTTGCACAACTCCTTCCACATCTTCAGCCTCTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170854.2
CDS CAA 90 bp GTGGTACAACAGTTGCAGTTGATGCATTACTACTACAAGTATGATTaGGACCAGGTGATGGACTTCTCTGGCTTAAGCGCTGAAGACTTC +
Preference number: 6 (lower is better)
Translates to: VVQQLQLMHYYYKYD*DQVMDFSGLSAEDF
Trigger: GAAGTCTTCAGCGCTTAAGCCAGAGAAGTCCATCACCTGGTCCAAATCATACTTGTAGTAGTAATGCATCAACTGCAACTGTTGTACCAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172018.8
CDS CCA 72 bp ATGTTGAAAGCAGATGGTCCAGCAGTAAGAAACTTGTaGATGATAGACTGCAGGGAAGCTTGTGTTACAGCT +
Preference number: 6 (lower is better)
Translates to: MLKADGPAVRNL*MIDCREACVTA
Trigger: AGCTGTAACACAAGCTTCCCTGCAGTCTATCATCCACAAGTTTCTTACTGCTGGACCATCTGCTTTCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000167542.2
ENSMUST00000171042.8
ENSMUST00000171486.8
ENSMUST00000172018.8
CDS CCA 72 bp TTGTTTGAGACAAAATATTCTGTGGGAGCAAACTACTaGCATCGCTGGAATGCTTGTCTTCCATTCCACTGG +
Preference number: 6 (lower is better)
Translates to: LFETKYSVGANY*HRWNACLPFHW
Trigger: CCAGTGGAATGGAAGACAAGCATTCCAGCGATGCCAGTAGTTTGCTCCCACAGAATATTTTGTCTCAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074919.11
ENSMUST00000165854.8
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000170854.2
ENSMUST00000172018.8
CDS CAA 72 bp TATTTGTTTTCAGGACTATTAGATCTCCGCAACATTTaGTTTGGTGGTGAAGGATCTGCGGCGTCTCGCATC +
Preference number: 6 (lower is better)
Translates to: YLFSGLLDLRNI*FGGEGSAASRI
Trigger: GATGCGAGACGCCGCAGATCCTTCACCACCAAACAAAATGTTGCGGAGATCTAATAGTCCTGAAAACAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000168446.8
CDS CAA 72 bp GTGATGTTGAAAGCAGATGGTCCAGCAGTAAGAAACTaGTGGATGATAGACTGCAGGGAAGCTTGTGTTACA +
Preference number: 6 (lower is better)
Translates to: VMLKADGPAVRN*WMIDCREACVT
Trigger: TGTAACACAAGCTTCCCTGCAGTCTATCATCCACAAGTTTCTTACTGCTGGACCATCTGCTTTCAACATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000167542.2
ENSMUST00000171042.8
ENSMUST00000171486.8
ENSMUST00000172018.8
CDS CAA 72 bp TTTGAGGTGTGCTTATTCTTGGAGACACATAGGATCTaGGGGATGAAGCATCAGATGTCAGAGACATTGGAG +
Preference number: 6 (lower is better)
Translates to: FEVCLFLETHRI*GMKHQMSETLE
Trigger: CTCCAATGTCTCTGACATCTGATGCTTCATCCCCAAGATCCTATGTGTCTCCAAGAATAAGCACACCTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000165854.8
ENSMUST00000167020.8
ENSMUST00000171042.8
ENSMUST00000171486.8
ENSMUST00000172018.8
CDS CAA 72 bp CAGTTGCAGTTGATGCATTACTACTACAAGTATGATTaGGACCAGGTGATGGACTTCTCTGGCTTAAGCGCT +
Preference number: 6 (lower is better)
Translates to: QLQLMHYYYKYD*DQVMDFSGLSA
Trigger: AGCGCTTAAGCCAGAGAAGTCCATCACCTGGTCCAAATCATACTTGTAGTAGTAATGCATCAACTGCAACTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172018.8
CDS CAA 90 bp ATCAGTGAGGTGATGTTGAAAGCAGATGGTCCAGCAGTAAGAAACTaGTGGATGATAGACTGCAGGGAAGCTTGTGTTACAGCTTCATTT +
Preference number: 6 (lower is better)
Translates to: ISEVMLKADGPAVRN*WMIDCREACVTASF
Trigger: AAATGAAGCTGTAACACAAGCTTCCCTGCAGTCTATCATCCACAAGTTTCTTACTGCTGGACCATCTGCTTTCAACATCACCTCACTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167542.2
ENSMUST00000171042.8
CDS GCA 72 bp CTGCTCTTGGCAGTCTGTAGTCTTTGTCATTGTGTCTaGTTGTTTGAGACAAAATATTCTGTGGGAGCAAAC +
Preference number: 6 (lower is better)
Translates to: LLLAVCSLCHCV*LFETKYSVGAN
Trigger: GTTTGCTCCCACAGAATATTTTGTCTCAAACAAGCAGACACAATGACAAAGACTACAGACTGCCAAGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074919.11
ENSMUST00000165854.8
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000170854.2
ENSMUST00000172018.8
CDS GCA 72 bp GATGGTCCAGCAGTAAGAAACTTGTGGATGATAGACTaGAGGGAAGCTTGTGTTACAGCTGCTTCATTTATT +
Preference number: 6 (lower is better)
Translates to: DGPAVRNLWMID*REACVTAASFI
Trigger: AATAAATGAAGCAGCTGTAACACAAGCTTCCCTGCAGTCTATCATCCACAAGTTTCTTACTGCTGGACCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000171486.8
ENSMUST00000172018.8
CDS CAA 72 bp CAGTTGCAGTTGATGCATTACTACTACAAGTATGATTaGGACCAGGTGATGGACTTCTCTGGCTACTTAAGC +
Preference number: 6 (lower is better)
Translates to: QLQLMHYYYKYD*DQVMDFSGYLS
Trigger: GCTTAAGTAGCCAGAGAAGTCCATCACCTGGTCCAAATCATACTTGTAGTAGTAATGCATCAACTGCAACTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000165854.8
ENSMUST00000167020.8
ENSMUST00000171042.8
ENSMUST00000171486.8
CDS TCA 72 bp ACAACAGTTGCAGTTGATGCATTACTACTACAAGTATaGTTTGGACCAGGTGATGGACTTCTCTGGCTACTT +
Preference number: 6 (lower is better)
Translates to: TTVAVDALLLQV*FGPGDGLLWLL
Trigger: AAGTAGCCAGAGAAGTCCATCACCTGGTCCAAATCATACTTGTAGTAGTAATGCATCAACTGCAACTGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000165854.8
ENSMUST00000167020.8
ENSMUST00000171042.8
ENSMUST00000171486.8
CDS TCA 72 bp ACAACAGTTGCAGTTGATGCATTACTACTACAAGTATaGTTTGGACCAGGTGATGGACTTCTCTGGCTTAAG +
Preference number: 6 (lower is better)
Translates to: TTVAVDALLLQV*FGPGDGLLWLK
Trigger: CTTAAGCCAGAGAAGTCCATCACCTGGTCCAAATCATACTTGTAGTAGTAATGCATCAACTGCAACTGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172018.8
CDS GCA 72 bp GTGGATGATAGACTGCAGGGAAGCTTGTGTTACAGCTaGTGTAAGAACTTCATTTATTTTGGATATGTCCAC +
Preference number: 6 (lower is better)
Translates to: VDDRLQGSLCYS*CKNFIYFGYVH
Trigger: GTGGACATATCCAAAATAAATGAAGTTCTTACAGCAGCTGTAACACAAGCTTCCCTGCAGTCTATCATCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
CDS GCA 72 bp GATGGTCCAGCAGTAAGAAACTTGTGGATGATAGACTaGAGGGAAGCTTGTGTTACAGCTTCATTTATTTTG +
Preference number: 6 (lower is better)
Translates to: DGPAVRNLWMID*REACVTASFIL
Trigger: CAAAATAAATGAAGCTGTAACACAAGCTTCCCTGCAGTCTATCATCCACAAGTTTCTTACTGCTGGACCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000167542.2
ENSMUST00000171042.8
CDS CAA 72 bp CTGAAGATGTGGAAGGAGTTGTGCAAGAATGTGATATaGATTTGTCTCCTGGAGCAGATTCTTTTCTCTCTG +
Preference number: 6 (lower is better)
Translates to: LKMWKELCKNVI*ICLLEQILFSL
Trigger: CAGAGAGAAAAGAATCTGCTCCAGGAGACAAATCAATATCACATTCTTGCACAACTCCTTCCACATCTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000074919.11
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000167542.2
ENSMUST00000172018.8
CDS CAA 72 bp GATGTGGAAGGAGTTGTGCAAGAATGTGATATTGATTaGTCTCCTGGAGCAGATTCTTTTCTCTCTGTTTTC +
Preference number: 6 (lower is better)
Translates to: DVEGVVQECDID*SPGADSFLSVF
Trigger: GAAAACAGAGAGAAAAGAATCTGCTCCAGGAGACAAATCAATATCACATTCTTGCACAACTCCTTCCACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000074919.11
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000167542.2
ENSMUST00000172018.8
CDS CAA 72 bp CTGAAGATGTGGAAGGAGTTGTGCAAGAATGTGATATaGATTTGTCTCCTGGAGCAGATTCTAAATGAAAGG +
Preference number: 6 (lower is better)
Translates to: LKMWKELCKNVI*ICLLEQILNER
Trigger: CCTTTCATTTAGAATCTGCTCCAGGAGACAAATCAATATCACATTCTTGCACAACTCCTTCCACATCTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170854.2
CDS TCA 72 bp TTCTCTTTCAAGCCACTCTTTTGGTTTCTCCCACTGTaGAACTTCTGTGCGACAATTGTAGTAGTACTTTTT +
Preference number: 6 (lower is better)
Translates to: FSFKPLFWFLPL*NFCATIVVVLF
Trigger: AAAAAGTACTACTACAATTGTCGCACAGAAGTTTCACAGTGGGAGAAACCAAAAGAGTGGCTTGAAAGAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000165854.8
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000168446.8
ENSMUST00000171042.8
ENSMUST00000171486.8
ENSMUST00000172018.8
CDS CAA 72 bp GTTGTCTCAAAAATAGTATCCTCTGCTCTCGCAAAGTaGCTTGAATTTCACATACTCGAACTAATGATCTCA +
Preference number: 6 (lower is better)
Translates to: VVSKIVSSALAK*LEFHILELMIS
Trigger: TGAGATCATTAGTTCGAGTATGTGAAATTCAAGCAACTTTGCGAGAGCAGAGGATACTATTTTTGAGACAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
ENSMUST00000171486.8
ENSMUST00000172018.8
CDS TCA 72 bp TTATTGCTTGGATTAGAAGAATGTGAATTTGAACTATaGAGTGCACTGTGGTTGTGTGAGTTTTCTTGTGGA +
Preference number: 6 (lower is better)
Translates to: LLLGLEECEFEL*SALWLCEFSCG
Trigger: TCCACAAGAAAACTCACACAACCACAGTGCACTTCATAGTTCAAATTCACATTCTTCTAATCCAAGCAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000165854.8
ENSMUST00000166062.8
ENSMUST00000167020.8
ENSMUST00000168446.8
ENSMUST00000169010.8
ENSMUST00000171042.8
ENSMUST00000171486.8
ENSMUST00000172018.8
CDS TCA 72 bp CTCAAAAATAGTATCCTCTGCTCTCGCAAAGTTGCTTaGATTTCACATACTCGAACTAATGATCTCAAATTT +
Preference number: 6 (lower is better)
Translates to: LKNSILCSRKVA*ISHTRTNDLKF
Trigger: AAATTTGAGATCATTAGTTCGAGTATGTGAAATTCAAGCAACTTTGCGAGAGCAGAGGATACTATTTTTGAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000074919.11
ENSMUST00000092112.11
ENSMUST00000167020.8
ENSMUST00000171042.8
ENSMUST00000171486.8
ENSMUST00000172018.8