RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VWF (Mus musculus)

Ensembl gene IDs: ENSMUSG00000001930

Ensembl transcript IDs: ENSMUST00000100941.9, ENSMUST00000112253.6, ENSMUST00000112254.8, ENSMUST00000147101.2

Found 635 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGTGGTACACGACAGAGCCATTGGTGCAGTGCAAGGGCACGCGCATaGGCTCCGTCCTCGAGGGCAGGCAGCAGGAGCATTGCTCCTGCA +
Preference number: 1 (lower is better)
Translates to: RGTRQSHWCSARARA*APSSRAGSRSIAPA
Trigger: TGCAGGAGCAATGCTCCTGCTGCCTGCCCTCGAGGACGGAGCCCATGCGCGTGCCCTTGCACTGCACCAATGGCTCTGTCGTGTACCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR GCA 90 bp ATGGCGTTGATGACCTCGTGGTACACGACAGAGCCATTGGTGCAGTaGAAGGGCACGCGCATGGGCTCCGTCCTCGAGGGCAGGCAGCAG +
Preference number: 1 (lower is better)
Translates to: MALMTSWYTTEPLVQ*KGTRMGSVLEGRQQ
Trigger: CTGCTGCCTGCCCTCGAGGACGGAGCCCATGCGCGTGCCCTTGCACTGCACCAATGGCTCTGTCGTGTACCACGAGGTCATCAACGCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR TCA 90 bp CCCAGGACAGAGCCCCTGGCAGCTGAGGACAATTATCCAGGAGGGTaGGGCTGCACCTGCCGCAGAAGAGGGCAGCTAGGAGAAACCGGA +
Preference number: 1 (lower is better)
Translates to: PRTEPLAAEDNYPGG*GCTCRRRGQLGETG
Trigger: TCCGGTTTCTCCTAGCTGCCCTCTTCTGCGGCAGGTGCAGCCTCACCCTCCTGGATAATTGTCCTCAGCTGCCAGGGGCTCTGTCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112253.6
3UTR GCA 90 bp GGCACGCGCATGGGCTCCGTCCTCGAGGGCAGGCAGCAGGAGCATTaGTCCTGCACATCCTCGATGTCAATGGAGTACACAGCTTTGCTG +
Preference number: 1 (lower is better)
Translates to: GTRMGSVLEGRQQEH*SCTSSMSMEYTALL
Trigger: CAGCAAAGCTGTGTACTCCATTGACATCGAGGATGTGCAGGAGCAATGCTCCTGCTGCCTGCCCTCGAGGACGGAGCCCATGCGCGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR GCA 90 bp GACAGCCAGCTGTGGGCAGGAGATGTTCCTCTGCTGCACAAACACTaGATCCTCCACGCGGACACACTCGTTGACGAGGCAGGGGTTCTC +
Preference number: 1 (lower is better)
Translates to: DSQLWAGDVPLLHKH*ILHADTLVDEAGVL
Trigger: GAGAACCCCTGCCTCGTCAACGAGTGTGTCCGCGTGGAGGATGCAGTGTTTGTGCAGCAGAGGAACATCTCCTGCCCACAGCTGGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR GCA 90 bp CGCATGGGCTCCGTCCTCGAGGGCAGGCAGCAGGAGCATTGCTCCTaGACATCCTCGATGTCAATGGAGTACACAGCTTTGCTGGCACAC +
Preference number: 1 (lower is better)
Translates to: RMGSVLEGRQQEHCS*TSSMSMEYTALLAH
Trigger: GTGTGCCAGCAAAGCTGTGTACTCCATTGACATCGAGGATGTGCAGGAGCAATGCTCCTGCTGCCTGCCCTCGAGGACGGAGCCCATGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR CCA 90 bp CAGTTCCGGGGAGAACACCTGCACTGCATGGCGTTGATGACCTCGTaGTACACGACAGAGCCATTGGTGCAGTGCAAGGGCACGCGCATG +
Preference number: 1 (lower is better)
Translates to: QFRGEHLHCMALMTS*YTTEPLVQCKGTRM
Trigger: CATGCGCGTGCCCTTGCACTGCACCAATGGCTCTGTCGTGTACCACGAGGTCATCAACGCCATGCAGTGCAGGTGTTCTCCCCGGAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR TCA 90 bp TCCTCTGCTGCACAAACACTGCATCCTCCACGCGGACACACTCGTTaGCGAGGCAGGGGTTCTCAGGAACAGCCCACCGAGATCCAACAC +
Preference number: 1 (lower is better)
Translates to: SSAAQTLHPPRGHTR*RGRGSQEQPTEIQH
Trigger: GTGTTGGATCTCGGTGGGCTGTTCCTGAGAACCCCTGCCTCGTCAACGAGTGTGTCCGCGTGGAGGATGCAGTGTTTGTGCAGCAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR GCA 90 bp CTGCACAGGCCTCACTTGCTGCAGTTCCGGGGAGAACACCTGCACTaGATGGCGTTGATGACCTCGTGGTACACGACAGAGCCATTGGTG +
Preference number: 1 (lower is better)
Translates to: LHRPHLLQFRGEHLH*MALMTSWYTTEPLV
Trigger: CACCAATGGCTCTGTCGTGTACCACGAGGTCATCAACGCCATGCAGTGCAGGTGTTCTCCCCGGAACTGCAGCAAGTGAGGCCTGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR TCA 90 bp ATTCCTGGAATAACACAACCTCCCCAGGACAGAGCCCCTGGCAGCTaGGGACAATTATCCAGGAGGGTGAGGCTGCACCTGCCGCAGAAG +
Preference number: 1 (lower is better)
Translates to: IPGITQPPQDRAPGS*GQLSRRVRLHLPQK
Trigger: CTTCTGCGGCAGGTGCAGCCTCACCCTCCTGGATAATTGTCCTCAGCTGCCAGGGGCTCTGTCCTGGGGAGGTTGTGTTATTCCAGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112253.6
3UTR GCA 90 bp ACAGCGGGGCTGAGATCCAAAGCCAGAGCTGAGGTCAGGAGGTGTTaGAGAGGTCACTCTCTGTTGTGCTGTGGGCTCTCTATCCAGCAG +
Preference number: 1 (lower is better)
Translates to: TAGLRSKARAEVRRC*RGHSLLCCGLSIQQ
Trigger: CTGCTGGATAGAGAGCCCACAGCACAACAGAGAGTGACCTCTGCAACACCTCCTGACCTCAGCTCTGGCTTTGGATCTCAGCCCCGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR CCA 90 bp TACCCAGATTCCTGGAATAACACAACCTCCCCAGGACAGAGCCCCTaGCAGCTGAGGACAATTATCCAGGAGGGTGAGGCTGCACCTGCC +
Preference number: 1 (lower is better)
Translates to: YPDSWNNTTSPGQSP*QLRTIIQEGEAAPA
Trigger: GGCAGGTGCAGCCTCACCCTCCTGGATAATTGTCCTCAGCTGCCAGGGGCTCTGTCCTGGGGAGGTTGTGTTATTCCAGGAATCTGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112253.6
3UTR CCA 90 bp TTCTCAGGAACAGCCCACCGAGATCCAACACTTTTCCAGGAAGAGTaGGAATCGCCCCGCAGTGAGCCAGCCACCACCTTGCAAGCAGAG +
Preference number: 1 (lower is better)
Translates to: FSGTAHRDPTLFQEE*ESPRSEPATTLQAE
Trigger: CTCTGCTTGCAAGGTGGTGGCTGGCTCACTGCGGGGCGATTCCCACTCTTCCTGGAAAAGTGTTGGATCTCGGTGGGCTGTTCCTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR CCA 90 bp CAGGTCTCACAGCTCAGCAACTTCATCCCCAGAACAAACAGGAGTTaGGCAGGGCCACCTACTCCCGCTTCAGCTGCTGTAGAGGAGCTA +
Preference number: 1 (lower is better)
Translates to: QVSQLSNFIPRTNRS*AGPPTPASAAVEEL
Trigger: TAGCTCCTCTACAGCAGCTGAAGCGGGAGTAGGTGGCCCTGCCCAACTCCTGTTTGTTCTGGGGATGAAGTTGCTGAGCTGTGAGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR GCA 90 bp GTAGTCTTCCTGCACTCCAGCTTGAATCTGGAGATGGCGTCTGTCTaGACGATGCAGCGGCAGGTCGTGCATAGGTCAACCATCACACTC +
Preference number: 1 (lower is better)
Translates to: VVFLHSSLNLEMASV*TMQRQVVHRSTITL
Trigger: GAGTGTGATGGTTGACCTATGCACGACCTGCCGCTGCATCGTGCAGACAGACGCCATCTCCAGATTCAAGCTGGAGTGCAGGAAGACTAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR GCA 90 bp GATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTAGCTaGACAGGCCTCACTTGCTGCAGTTCCGGGGAGAACACCTGCACT +
Preference number: 1 (lower is better)
Translates to: DSQVIAWVSVGIRCS*TGLTCCSSGENTCT
Trigger: AGTGCAGGTGTTCTCCCCGGAACTGCAGCAAGTGAGGCCTGTGCAGCTACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR CCA 90 bp GGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATaGGTATCAGTAGGAATCCGCTGTAGCTGCACAGGCCTCACTTGC +
Preference number: 1 (lower is better)
Translates to: GPREGSGFLDSQVIA*VSVGIRCSCTGLTC
Trigger: GCAAGTGAGGCCTGTGCAGCTACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR CCA 90 bp GCACCTTCCACAGCACTCGCCTTCGTGGAGAACATAAGAAAAACCTaGCTGACAGCTGTCTTCACAGGGCCTTTGAGAGCACTGGACCAC +
Preference number: 1 (lower is better)
Translates to: APSTALAFVENIRKT*LTAVFTGPLRALDH
Trigger: GTGGTCCAGTGCTCTCAAAGGCCCTGTGAAGACAGCTGTCAGCCAGGTTTTTCTTATGTTCTCCACGAAGGCGAGTGCTGTGGAAGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR CCA 90 bp AGGGCAGGCAGCAGGAGCATTGCTCCTGCACATCCTCGATGTCAATaGAGTACACAGCTTTGCTGGCACACTTTCCCTGGCAGTAATGAA +
Preference number: 1 (lower is better)
Translates to: RAGSRSIAPAHPRCQ*STQLCWHTFPGSNE
Trigger: TTCATTACTGCCAGGGAAAGTGTGCCAGCAAAGCTGTGTACTCCATTGACATCGAGGATGTGCAGGAGCAATGCTCCTGCTGCCTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR CCA 90 bp ATTGCTCCTGCACATCCTCGATGTCAATGGAGTACACAGCTTTGCTaGCACACTTTCCCTGGCAGTAATGAATGTCCACTTCCTCTTGGG +
Preference number: 1 (lower is better)
Translates to: IAPAHPRCQWSTQLC*HTFPGSNECPLPLG
Trigger: CCCAAGAGGAAGTGGACATTCATTACTGCCAGGGAAAGTGTGCCAGCAAAGCTGTGTACTCCATTGACATCGAGGATGTGCAGGAGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR GCA 90 bp AGCATTGCTCCTGCACATCCTCGATGTCAATGGAGTACACAGCTTTaGTGGCACACTTTCCCTGGCAGTAATGAATGTCCACTTCCTCTT +
Preference number: 1 (lower is better)
Translates to: SIAPAHPRCQWSTQL*WHTFPGSNECPLPL
Trigger: AAGAGGAAGTGGACATTCATTACTGCCAGGGAAAGTGTGCCAGCAAAGCTGTGTACTCCATTGACATCGAGGATGTGCAGGAGCAATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR TCA 90 bp GGGAAGGCTTGGGGACACTCCTTTATTTGTTCCTCTTCCCAGTGTTaGATAAATCTCCACCCTCCGCCCTTCACTGTTGTTCTGTTTAAC +
Preference number: 1 (lower is better)
Translates to: GKAWGHSFICSSSQC*INLHPPPFTVVLFN
Trigger: GTTAAACAGAACAACAGTGAAGGGCGGAGGGTGGAGATTTATTCAACACTGGGAAGAGGAACAAATAAAGGAGTGTCCCCAAGCCTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112253.6
3UTR GCA 90 bp TATGGAAACCTTCCTCTTGACTTTCCAAAGAAGTTCTCTTCTCTTTaGTTGGTCAGCCCTGCCCTTCAGGTCTCACAGCTCAGCAACTTC +
Preference number: 1 (lower is better)
Translates to: YGNLPLDFPKKFSSL*LVSPALQVSQLSNF
Trigger: GAAGTTGCTGAGCTGTGAGACCTGAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTTGGAAAGTCAAGAGGAAGGTTTCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR GCA 90 bp ATGTCCACTTCCTCTTGGGACTTACAATCTCCCACTTTGATGTACTaGACCTTGGCTGTGATGTCTTTGCAATCAGGCTCCTCACATGTG +
Preference number: 1 (lower is better)
Translates to: MSTSSWDLQSPTLMY*TLAVMSLQSGSSHV
Trigger: CACATGTGAGGAGCCTGATTGCAAAGACATCACAGCCAAGGTGCAGTACATCAAAGTGGGAGATTGTAAGTCCCAAGAGGAAGTGGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR CAA 90 bp CTGCACTGCATGGCGTTGATGACCTCGTGGTACACGACAGAGCCATaGGTGCAGTGCAAGGGCACGCGCATGGGCTCCGTCCTCGAGGGC +
Preference number: 2 (lower is better)
Translates to: LHCMALMTSWYTTEP*VQCKGTRMGSVLEG
Trigger: GCCCTCGAGGACGGAGCCCATGCGCGTGCCCTTGCACTGCACCAATGGCTCTGTCGTGTACCACGAGGTCATCAACGCCATGCAGTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR-3UTR TCA 90 bp CAGGCCTCCACAGGCTCACAGTGGCAGCTAGGACAGCACTCTGAGGTCTCACAGCGCGGACACACTCGTTaGCGAGGCAGGGGTTCTCAG +
Preference number: 2 (lower is better)
Translates to: QASTGSQWQLGQHSEVSQRGHTR*RGRGSQ
Trigger: CTGAGAACCCCTGCCTCGTCAACGAGTGTGTCCGCG...CTGTGAGACCTCAGAGTGCTGTCCTAGCTGCCACTGTGAGCCTGTGGAGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR CAA 90 bp GGGCACGCGCATGGGCTCCGTCCTCGAGGGCAGGCAGCAGGAGCATaGCTCCTGCACATCCTCGATGTCAATGGAGTACACAGCTTTGCT +
Preference number: 2 (lower is better)
Translates to: GHAHGLRPRGQAAGA*LLHILDVNGVHSFA
Trigger: AGCAAAGCTGTGTACTCCATTGACATCGAGGATGTGCAGGAGCAATGCTCCTGCTGCCTGCCCTCGAGGACGGAGCCCATGCGCGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR-3UTR GCA 90 bp ATCTCCCACAGCATTCACCCTGGCTCTTCTCTTCCCGATAGCCCATGGGGCAGGAGCCAGCCACCACCTTaGAAGCAGAGGGCAGGCACC +
Preference number: 2 (lower is better)
Translates to: ISHSIHPGSSLPDSPWGRSQPPP*KQRAGT
Trigger: GGTGCCTGCCCTCTGCTTGCAAGGTGGTGGCTGGCT...CCTGCCCCATGGGCTATCGGGAAGAGAAGAGCCAGGGTGAATGCTGTGGGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR CAA 90 bp CATAGGTCAACCATCACACTCTTCCCGGGCCCAATGATGGTGCCATaGAGCAGGCAGGCCTCCACAGGCTCACAGTGGCAGCTAGGACAG +
Preference number: 2 (lower is better)
Translates to: HRSTITLFPGPMMVP*SRQASTGSQWQLGQ
Trigger: CTGTCCTAGCTGCCACTGTGAGCCTGTGGAGGCCTGCCTGCTCAATGGCACCATCATTGGGCCCGGGAAGAGTGTGATGGTTGACCTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR CAA 90 bp TTCCTCTGCTGCACAAACACTGCATCCTCCACGCGGACACACTCGTaGACGAGGCAGGGGTTCTCAGGAACAGCCCACCGAGATCCAACA +
Preference number: 2 (lower is better)
Translates to: FLCCTNTASSTRTHS*TRQGFSGTAHRDPT
Trigger: TGTTGGATCTCGGTGGGCTGTTCCTGAGAACCCCTGCCTCGTCAACGAGTGTGTCCGCGTGGAGGATGCAGTGTTTGTGCAGCAGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR CAA 90 bp CCTCACTTGCTGCAGTTCCGGGGAGAACACCTGCACTGCATGGCGTaGATGACCTCGTGGTACACGACAGAGCCATTGGTGCAGTGCAAG +
Preference number: 2 (lower is better)
Translates to: PHLLQFRGEHLHCMA*MTSWYTTEPLVQCK
Trigger: CTTGCACTGCACCAATGGCTCTGTCGTGTACCACGAGGTCATCAACGCCATGCAGTGCAGGTGTTCTCCCCGGAACTGCAGCAAGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR CAA 90 bp TCAGGTCTCACAGCTCAGCAACTTCATCCCCAGAACAAACAGGAGTaGGGCAGGGCCACCTACTCCCGCTTCAGCTGCTGTAGAGGAGCT +
Preference number: 2 (lower is better)
Translates to: SGLTAQQLHPQNKQE*GRATYSRFSCCRGA
Trigger: AGCTCCTCTACAGCAGCTGAAGCGGGAGTAGGTGGCCCTGCCCAACTCCTGTTTGTTCTGGGGATGAAGTTGCTGAGCTGTGAGACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR-3UTR TCA 90 bp TTGCCTCCTTCAGCCAGACACTTGTGTTCATCAAATGGTGGGCAGCCCGTGACCTTGACCCTGCACAAATaGCTGTCACAGCCATCCTGG +
Preference number: 2 (lower is better)
Translates to: LPPSARHLCSSNGGQPVTLTLHK*LSQPSW
Trigger: CCAGGATGGCTGTGACAGTCATTTGTGCAGGGTCAA...GGTCACGGGCTGCCCACCATTTGATGAACACAAGTGTCTGGCTGAAGGAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR-3UTR CCA 90 bp CTCACAGGTAGTCTTCCTGCACTCCAGCTTGAATCTGGAGATGGCGTCTGTCTGCTTTTCCAGGAAGAGTaGGAATCGCCCCGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: LTGSLPALQLESGDGVCLLFQEE*ESPRSE
Trigger: CTCACTGCGGGGCGATTCCCACTCTTCCTGGAAAAG...CAGACAGACGCCATCTCCAGATTCAAGCTGGAGTGCAGGAAGACTACCTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR CAA 90 bp ACAGCAATAAGGGCTTCCCGGGAAGGCTTGGGGACACTCCTTTATTaGTTCCTCTTCCCAGTGTTGAATAAATCTCCACCCTCCGCCCTT +
Preference number: 2 (lower is better)
Translates to: TAIRASREGLGTLLY*FLFPVLNKSPPSAL
Trigger: AAGGGCGGAGGGTGGAGATTTATTCAACACTGGGAAGAGGAACAAATAAAGGAGTGTCCCCAAGCCTTCCCGGGAAGCCCTTATTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112253.6
3UTR-3UTR TCA 90 bp CTCTTGACTTTCCAAAGAAGTTCTCTTCTCTTTGCTTGGTCAGCCCTGCCCTTCATCCAAAGCCAGAGCTaGGGTCAGGAGGTGTTGCAG +
Preference number: 2 (lower is better)
Translates to: LLTFQRSSLLFAWSALPFIQSQS*GQEVLQ
Trigger: CTGCAACACCTCCTGACCTCAGCTCTGGCTTTGGAT...GAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTTGGAAAGTCAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR-3UTR TCA 90 bp TGGGACTTACAATCTCCCACTTTGATGTACTGCACCTTGGCTGTGATGTCTTTGTCTTCACAGGGCCTTTaGGAGCACTGGACCACACGC +
Preference number: 2 (lower is better)
Translates to: WDLQSPTLMYCTLAVMSLSSQGL*EHWTTR
Trigger: GCGTGTGGTCCAGTGCTCTCAAAGGCCCTGTGAAGA...CAAAGACATCACAGCCAAGGTGCAGTACATCAAAGTGGGAGATTGTAAGTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR-3UTR TCA 90 bp GACTTACAATCTCCCACTTTGATGTACTGCACCTTGGCTGTGATGTCTTTGCAAATGGTGGGCAGCCCGTaGCCCTCTTCTCCCAGATGT +
Preference number: 2 (lower is better)
Translates to: DLQSPTLMYCTLAVMSLQMVGSP*PSSPRC
Trigger: ACATCTGGGAGAAGAGGGTCACGGGCTGCCCACCAT...TTGCAAAGACATCACAGCCAAGGTGCAGTACATCAAAGTGGGAGATTGTAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR-3UTR GCA 90 bp CTTTCCAAAGAAGTTCTCTTCTCTTTGCTTGGTCAGCCCTGCCCTTCAGGTCTCGAGGTCAGGAGGTGTTaGAGAGGTCACTCTCTGTTG +
Preference number: 2 (lower is better)
Translates to: LSKEVLFSLLGQPCPSGLEVRRC*RGHSLL
Trigger: CAACAGAGAGTGACCTCTGCAACACCTCCTGACCTC...GAGACCTGAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTTGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR-3UTR CCA 90 bp TGGGACTTACAATCTCCCACTTTGATGTACTGCACCTTGGCTGTGATGTCTTTGGGAGACAGGTGGTCGTaGTGCAGCCACAGTCATTGG +
Preference number: 2 (lower is better)
Translates to: WDLQSPTLMYCTLAVMSLGDRWS*CSHSHW
Trigger: CCAATGACTGTGGCTGCACCACGACCACCTGTCTCC...CAAAGACATCACAGCCAAGGTGCAGTACATCAAAGTGGGAGATTGTAAGTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR-3UTR CCA 90 bp TGGGACTTACAATCTCCCACTTTGATGTACTGCACCTTGGCTGTGATGTCTTTGAGGGACAGCCAGCTGTaGGCAGGAGATGTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: WDLQSPTLMYCTLAVMSLRDSQL*AGDVPL
Trigger: CAGAGGAACATCTCCTGCCCACAGCTGGCTGTCCCT...CAAAGACATCACAGCCAAGGTGCAGTACATCAAAGTGGGAGATTGTAAGTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR CAA 90 bp GGAAACCTTCCTCTTGACTTTCCAAAGAAGTTCTCTTCTCTTTGCTaGGTCAGCCCTGCCCTTCAGGTCTCACAGCTCAGCAACTTCATC +
Preference number: 2 (lower is better)
Translates to: GNLPLDFPKKFSSLC*VSPALQVSQLSNFI
Trigger: GATGAAGTTGCTGAGCTGTGAGACCTGAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTTGGAAAGTCAAGAGGAAGGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR-3UTR GCA 90 bp ACTCTCACTCCAAGCCAAAAGGCTTATGGAAACCTTCCTCTTGACTTTCCAAAGGAGGTCAGGAGGTGTTaGAGAGGTCACTCTCTGTTG +
Preference number: 2 (lower is better)
Translates to: TLTPSQKAYGNLPLDFPKEVRRC*RGHSLL
Trigger: CAACAGAGAGTGACCTCTGCAACACCTCCTGACCTC...CTTTGGAAAGTCAAGAGGAAGGTTTCCATAAGCCTTTTGGCTTGGAGTGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR-3UTR TCA 90 bp GTTGTGTCCTTAAAATTCAGGTTATACTCTCACTCCAAGCCAAAAGGCTTATGGATCCAAAGCCAGAGCTaGGGTCAGGAGGTGTTGCAG +
Preference number: 2 (lower is better)
Translates to: VVSLKFRLYSHSKPKGLWIQSQS*GQEVLQ
Trigger: CTGCAACACCTCCTGACCTCAGCTCTGGCTTTGGAT...CCATAAGCCTTTTGGCTTGGAGTGAGAGTATAACCTGAATTTTAAGGACACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR-3UTR CCA 90 bp AATTCAGGTTATACTCTCACTCCAAGCCAAAAGGCTTATGGAAACCTTCCTCTTAGAACAAACAGGAGTTaGGCAGGGCCACCTACTCCC +
Preference number: 2 (lower is better)
Translates to: NSGYTLTPSQKAYGNLPLRTNRS*AGPPTP
Trigger: GGGAGTAGGTGGCCCTGCCCAACTCCTGTTTGTTCT...AAGAGGAAGGTTTCCATAAGCCTTTTGGCTTGGAGTGAGAGTATAACCTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR CAA 90 bp GTTATACTCTCACTCCAAGCCAAAAGGCTTATGGAAACCTTCCTCTaGACTTTCCAAAGAAGTTCTCTTCTCTTTGCTTGGTCAGCCCTG +
Preference number: 2 (lower is better)
Translates to: VILSLQAKRLMETFL*TFQRSSLLFAWSAL
Trigger: CAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTTGGAAAGTCAAGAGGAAGGTTTCCATAAGCCTTTTGGCTTGGAGTGAGAGTATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR-3UTR CCA 90 bp CTAGTGTATTGGGGCTACAGAAACTTAGTTGTGTCCTTAAAATTCAGGTTATACAGAACAAACAGGAGTTaGGCAGGGCCACCTACTCCC +
Preference number: 2 (lower is better)
Translates to: LVYWGYRNLVVSLKFRLYRTNRS*AGPPTP
Trigger: GGGAGTAGGTGGCCCTGCCCAACTCCTGTTTGTTCT...GTATAACCTGAATTTTAAGGACACAACTAAGTTTCTGTAGCCCCAATACACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR-3UTR GCA 90 bp TTGGGGCTACAGAAACTTAGTTGTGTCCTTAAAATTCAGGTTATACTCTCACTCAAGTTCTCTTCTCTTTaGTTGGTCAGCCCTGCCCTT +
Preference number: 2 (lower is better)
Translates to: LGLQKLSCVLKIQVILSLKFSSL*LVSPAL
Trigger: AAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTT...GAGTGAGAGTATAACCTGAATTTTAAGGACACAACTAAGTTTCTGTAGCCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR CCA 72 bp CGACAGAGCCATTGGTGCAGTGCAAGGGCACGCGCATaGGCTCCGTCCTCGAGGGCAGGCAGCAGGAGCATT +
Preference number: 3 (lower is better)
Translates to: RQSHWCSARARA*APSSRAGSRSI
Trigger: AATGCTCCTGCTGCCTGCCCTCGAGGACGGAGCCCATGCGCGTGCCCTTGCACTGCACCAATGGCTCTGTCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR GCA 72 bp ATGACCTCGTGGTACACGACAGAGCCATTGGTGCAGTaGAAGGGCACGCGCATGGGCTCCGTCCTCGAGGGC +
Preference number: 3 (lower is better)
Translates to: MTSWYTTEPLVQ*KGTRMGSVLEG
Trigger: GCCCTCGAGGACGGAGCCCATGCGCGTGCCCTTGCACTGCACCAATGGCTCTGTCGTGTACCACGAGGTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR TCA 72 bp GAGCCCCTGGCAGCTGAGGACAATTATCCAGGAGGGTaGGGCTGCACCTGCCGCAGAAGAGGGCAGCTAGGA +
Preference number: 3 (lower is better)
Translates to: EPLAAEDNYPGG*GCTCRRRGQLG
Trigger: TCCTAGCTGCCCTCTTCTGCGGCAGGTGCAGCCTCACCCTCCTGGATAATTGTCCTCAGCTGCCAGGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112253.6
3UTR GCA 72 bp GCAGGCCCACGACAGTATCCTCCATGTCCGTACAGGTaGACGTGTCACAGCCCTCCTCCCAGAACTGGCCCA +
Preference number: 3 (lower is better)
Translates to: AGPRQYPPCPYR*TCHSPPPRTGP
Trigger: TGGGCCAGTTCTGGGAGGAGGGCTGTGACACGTGCACCTGTACGGACATGGAGGATACTGTCGTGGGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR TCA 72 bp GCACAAACACTGCATCCTCCACGCGGACACACTCGTTaGCGAGGCAGGGGTTCTCAGGAACAGCCCACCGAG +
Preference number: 3 (lower is better)
Translates to: AQTLHPPRGHTR*RGRGSQEQPTE
Trigger: CTCGGTGGGCTGTTCCTGAGAACCCCTGCCTCGTCAACGAGTGTGTCCGCGTGGAGGATGCAGTGTTTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR GCA 72 bp GAGGTCAGGAGGTGTTGCAGAGGTCACTCTCTGTTGTaGTGTGGGCTCTCTATCCAGCAGGGCAGGGGAGGG +
Preference number: 3 (lower is better)
Translates to: EVRRCCRGHSLL*CGLSIQQGRGG
Trigger: CCCTCCCCTGCCCTGCTGGATAGAGAGCCCACAGCACAACAGAGAGTGACCTCTGCAACACCTCCTGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR-3UTR CAA 90 bp ACCCTGGCTCTTCTCTTCCCGATAGCCCATGGGGCAGGCCTCACAGGTAGTCTTGTGCAGCCACAGTCATaGGTAGTGGCTGAGGCCAGG +
Preference number: 3 (lower is better)
Translates to: TLALLFPIAHGAGLTGSLVQPQS*VVAEAR
Trigger: CCTGGCCTCAGCCACTACCAATGACTGTGGCTGCAC...AAGACTACCTGTGAGGCCTGCCCCATGGGCTATCGGGAAGAGAAGAGCCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR GCA 72 bp GTAGGGACAGCCAGCTGTGGGCAGGAGATGTTCCTCTaGTGCACAAACACTGCATCCTCCACGCGGACACAC +
Preference number: 3 (lower is better)
Translates to: VGTASCGQEMFL*CTNTASSTRTH
Trigger: GTGTGTCCGCGTGGAGGATGCAGTGTTTGTGCAGCAGAGGAACATCTCCTGCCCACAGCTGGCTGTCCCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR GCA 72 bp AGATGGCGTCTGTCTGCACGATGCAGCGGCAGGTCGTaGATAGGTCAACCATCACACTCTTCCCGGGCCCAA +
Preference number: 3 (lower is better)
Translates to: RWRLSARCSGRS*IGQPSHSSRAQ
Trigger: TTGGGCCCGGGAAGAGTGTGATGGTTGACCTATGCACGACCTGCCGCTGCATCGTGCAGACAGACGCCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR GCA 72 bp GTAGGAATCCGCTGTAGCTGCACAGGCCTCACTTGCTaGAGTTCCGGGGAGAACACCTGCACTGCATGGCGT +
Preference number: 3 (lower is better)
Translates to: VGIRCSCTGLTC*SSGENTCTAWR
Trigger: ACGCCATGCAGTGCAGGTGTTCTCCCCGGAACTGCAGCAAGTGAGGCCTGTGCAGCTACAGCGGATTCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR CCA 72 bp ACAGCCCACCGAGATCCAACACTTTTCCAGGAAGAGTaGGAATCGCCCCGCAGTGAGCCAGCCACCACCTTG +
Preference number: 3 (lower is better)
Translates to: TAHRDPTLFQEE*ESPRSEPATTL
Trigger: CAAGGTGGTGGCTGGCTCACTGCGGGGCGATTCCCACTCTTCCTGGAAAAGTGTTGGATCTCGGTGGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR-3UTR CAA 90 bp ACCCTGGCTCTTCTCTTCCCGATAGCCCATGGGGCAGGCCTCACAGGTAGTCTTCGGTGGACACAAACCTaGTCAGGGAGACAGGTGGTC +
Preference number: 3 (lower is better)
Translates to: TLALLFPIAHGAGLTGSLRWTQT*SGRQVV
Trigger: GACCACCTGTCTCCCTGACAAGGTTTGTGTCCACCG...AAGACTACCTGTGAGGCCTGCCCCATGGGCTATCGGGAAGAGAAGAGCCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR-3UTR CAA 90 bp GCCTTTGAGAGCACTGGACCACACGCAGGCCCACGACAGTATCCTCCATGTCCGGGTGGGGACACTCTTTaGCACTCTTCTTTCCTGCAG +
Preference number: 3 (lower is better)
Translates to: AFESTGPHAGPRQYPPCPGGDTL*HSSFLQ
Trigger: CTGCAGGAAAGAAGAGTGCAAAAGAGTGTCCCCACC...CGGACATGGAGGATACTGTCGTGGGCCTGCGTGTGGTCCAGTGCTCTCAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR TCA 72 bp ATAACACAACCTCCCCAGGACAGAGCCCCTGGCAGCTaGGGACAATTATCCAGGAGGGTGAGGCTGCACCTG +
Preference number: 3 (lower is better)
Translates to: ITQPPQDRAPGS*GQLSRRVRLHL
Trigger: CAGGTGCAGCCTCACCCTCCTGGATAATTGTCCTCAGCTGCCAGGGGCTCTGTCCTGGGGAGGTTGTGTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112253.6
3UTR GCA 72 bp CTGTGGGCAGGAGATGTTCCTCTGCTGCACAAACACTaGATCCTCCACGCGGACACACTCGTTGACGAGGCA +
Preference number: 3 (lower is better)
Translates to: LWAGDVPLLHKH*ILHADTLVDEA
Trigger: TGCCTCGTCAACGAGTGTGTCCGCGTGGAGGATGCAGTGTTTGTGCAGCAGAGGAACATCTCCTGCCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR GCA 72 bp CTGCACTCCAGCTTGAATCTGGAGATGGCGTCTGTCTaGACGATGCAGCGGCAGGTCGTGCATAGGTCAACC +
Preference number: 3 (lower is better)
Translates to: LHSSLNLEMASV*TMQRQVVHRST
Trigger: GGTTGACCTATGCACGACCTGCCGCTGCATCGTGCAGACAGACGCCATCTCCAGATTCAAGCTGGAGTGCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR GCA 72 bp CCTCACTTGCTGCAGTTCCGGGGAGAACACCTGCACTaGATGGCGTTGATGACCTCGTGGTACACGACAGAG +
Preference number: 3 (lower is better)
Translates to: PHLLQFRGEHLH*MALMTSWYTTE
Trigger: CTCTGTCGTGTACCACGAGGTCATCAACGCCATGCAGTGCAGGTGTTCTCCCCGGAACTGCAGCAAGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR CCA 72 bp TTGGAAGCCTGTGGGACAGGTAGGGACAGCCAGCTGTaGGCAGGAGATGTTCCTCTGCTGCACAAACACTGC +
Preference number: 3 (lower is better)
Translates to: LEACGTGRDSQL*AGDVPLLHKHC
Trigger: GCAGTGTTTGTGCAGCAGAGGAACATCTCCTGCCCACAGCTGGCTGTCCCTACCTGTCCCACAGGCTTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR CCA 72 bp GGAGAACACCTGCACTGCATGGCGTTGATGACCTCGTaGTACACGACAGAGCCATTGGTGCAGTGCAAGGGC +
Preference number: 3 (lower is better)
Translates to: GEHLHCMALMTS*YTTEPLVQCKG
Trigger: GCCCTTGCACTGCACCAATGGCTCTGTCGTGTACCACGAGGTCATCAACGCCATGCAGTGCAGGTGTTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR-3UTR CAA 90 bp GAGATCCAACACTTTTCCAGGAAGAGTGGGAATCGCCCCGCAGTGAGCCAGCCAAGAACTTGGCCTTTATaGTGGGCCCAGGAGGGCACA +
Preference number: 3 (lower is better)
Translates to: EIQHFSRKSGNRPAVSQPRTWPL*WAQEGT
Trigger: TGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCT...TGGCTGGCTCACTGCGGGGCGATTCCCACTCTTCCTGGAAAAGTGTTGGATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR-3UTR CAA 90 bp GTAGTCTTCCTGCACTCCAGCTTGAATCTGGAGATGGCGTCTGTCTGCACGATGACGCGGACACACTCGTaGACGAGGCAGGGGTTCTCA +
Preference number: 3 (lower is better)
Translates to: VVFLHSSLNLEMASVCTMTRTHS*TRQGFS
Trigger: TGAGAACCCCTGCCTCGTCAACGAGTGTGTCCGCGT...CATCGTGCAGACAGACGCCATCTCCAGATTCAAGCTGGAGTGCAGGAAGACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR GCA 72 bp TCCGTCCTCGAGGGCAGGCAGCAGGAGCATTGCTCCTaGACATCCTCGATGTCAATGGAGTACACAGCTTTG +
Preference number: 3 (lower is better)
Translates to: SVLEGRQQEHCS*TSSMSMEYTAL
Trigger: CAAAGCTGTGTACTCCATTGACATCGAGGATGTGCAGGAGCAATGCTCCTGCTGCCTGCCCTCGAGGACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR CCA 72 bp CAGCTCAGCAACTTCATCCCCAGAACAAACAGGAGTTaGGCAGGGCCACCTACTCCCGCTTCAGCTGCTGTA +
Preference number: 3 (lower is better)
Translates to: QLSNFIPRTNRS*AGPPTPASAAV
Trigger: TACAGCAGCTGAAGCGGGAGTAGGTGGCCCTGCCCAACTCCTGTTTGTTCTGGGGATGAAGTTGCTGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR CCA 72 bp CAGCTAGGACAGCACTCTGAGGTCTCACAGTTCAGTTaGAAGCCTGTGGGACAGGTAGGGACAGCCAGCTGT +
Preference number: 3 (lower is better)
Translates to: QLGQHSEVSQFS*KPVGQVGTASC
Trigger: ACAGCTGGCTGTCCCTACCTGTCCCACAGGCTTCCAACTGAACTGTGAGACCTCAGAGTGCTGTCCTAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR GCA 72 bp GTCATAGCATGGGTATCAGTAGGAATCCGCTGTAGCTaGACAGGCCTCACTTGCTGCAGTTCCGGGGAGAAC +
Preference number: 3 (lower is better)
Translates to: VIAWVSVGIRCS*TGLTCCSSGEN
Trigger: GTTCTCCCCGGAACTGCAGCAAGTGAGGCCTGTGCAGCTACAGCGGATTCCTACTGATACCCATGCTATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR-3UTR CAA 90 bp ATCTCTACCTTCCCAGTGTCTGTCTCCTCTACCTTGGCGGAAGGTACAGAGCTACAGAACAAACAGGAGTaGGGCAGGGCCACCTACTCC +
Preference number: 3 (lower is better)
Translates to: ISTFPVSVSSTLAEGTELQNKQE*GRATYS
Trigger: GGAGTAGGTGGCCCTGCCCAACTCCTGTTTGTTCTG...TAGCTCTGTACCTTCCGCCAAGGTAGAGGAGACAGACACTGGGAAGGTAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112253.6
3UTR CCA 72 bp AGCAGGAGCATTGCTCCTGCACATCCTCGATGTCAATaGAGTACACAGCTTTGCTGGCACACTTTCCCTGGC +
Preference number: 3 (lower is better)
Translates to: SRSIAPAHPRCQ*STQLCWHTFPG
Trigger: GCCAGGGAAAGTGTGCCAGCAAAGCTGTGTACTCCATTGACATCGAGGATGTGCAGGAGCAATGCTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR-3UTR CAA 90 bp AAAGAAGTTCTCTTCTCTTTGCTTGGTCAGCCCTGCCCTTCAGGTCTCACAGCTCAGAACAAACAGGAGTaGGGCAGGGCCACCTACTCC +
Preference number: 3 (lower is better)
Translates to: KEVLFSLLGQPCPSGLTAQNKQE*GRATYS
Trigger: GGAGTAGGTGGCCCTGCCCAACTCCTGTTTGTTCTG...AGCTGTGAGACCTGAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR-3UTR CAA 90 bp GGGCAGCTAGGAGAAACCGGATTGACAGCAATAAGGGCTTCCCGGGAAGGCTTGGGGACACTCCTTTATTaGTTCCTCTTCCCAGTGTTG +
Preference number: 3 (lower is better)
Translates to: GQLGETGLTAIRASREGLGTLLY*FLFPVL
Trigger: CAACACTGGGAAGAGGAACAAATAAAGGAGTGTCCC...CAAGCCTTCCCGGGAAGCCCTTATTGCTGTCAATCCGGTTTCTCCTAGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112253.6
3UTR TCA 72 bp TCTTGCTTCAGGGTCATGATCCGTCCTCCTCTTAGCTaGATAGTGCAAGCTGTAGGCAAGCATCTCCCACAG +
Preference number: 3 (lower is better)
Translates to: SCFRVMIRPPLS*IVQAVGKHLPQ
Trigger: CTGTGGGAGATGCTTGCCTACAGCTTGCACTATTCAGCTAAGAGGAGGACGGATCATGACCCTGAAGCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR CCA 72 bp ACAGCACTCGCCTTCGTGGAGAACATAAGAAAAACCTaGCTGACAGCTGTCTTCACAGGGCCTTTGAGAGCA +
Preference number: 3 (lower is better)
Translates to: TALAFVENIRKT*LTAVFTGPLRA
Trigger: TGCTCTCAAAGGCCCTGTGAAGACAGCTGTCAGCCAGGTTTTTCTTATGTTCTCCACGAAGGCGAGTGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR-3UTR CAA 90 bp GACTTACAATCTCCCACTTTGATGTACTGCACCTTGGCTGTGATGTCTTTGCAAGTCTTCACAGGGCCTTaGAGAGCACTGGACCACACG +
Preference number: 3 (lower is better)
Translates to: DLQSPTLMYCTLAVMSLQVFTGP*RALDHT
Trigger: CGTGTGGTCCAGTGCTCTCAAAGGCCCTGTGAAGAC...TTGCAAAGACATCACAGCCAAGGTGCAGTACATCAAAGTGGGAGATTGTAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR TCA 72 bp CAGATGTACTCTCCTCTCTCGTTGACCCTGCACAAATaGCTGTCACAGCCATCCTGGAATGTCTCATCTTGC +
Preference number: 3 (lower is better)
Translates to: QMYSPLSLTLHK*LSQPSWNVSSC
Trigger: GCAAGATGAGACATTCCAGGATGGCTGTGACAGTCATTTGTGCAGGGTCAACGAGAGAGGAGAGTACATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR GCA 72 bp CCTGCACATCCTCGATGTCAATGGAGTACACAGCTTTaGTGGCACACTTTCCCTGGCAGTAATGAATGTCCA +
Preference number: 3 (lower is better)
Translates to: PAHPRCQWSTQL*WHTFPGSNECP
Trigger: TGGACATTCATTACTGCCAGGGAAAGTGTGCCAGCAAAGCTGTGTACTCCATTGACATCGAGGATGTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR-3UTR CAA 90 bp CTTTATTTGTTCCTCTTCCCAGTGTTGAATAAATCTCCACCCTCCGCCCTTCACAGAGGTCACTCTCTGTaGTGCTGTGGGCTCTCTATC +
Preference number: 3 (lower is better)
Translates to: LYLFLFPVLNKSPPSALHRGHSL*CCGLSI
Trigger: GATAGAGAGCCCACAGCACAACAGAGAGTGACCTCT...GTGAAGGGCGGAGGGTGGAGATTTATTCAACACTGGGAAGAGGAACAAATAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR GCA 72 bp TCCTCTTGGGACTTACAATCTCCCACTTTGATGTACTaGACCTTGGCTGTGATGTCTTTGCAATCAGGCTCC +
Preference number: 3 (lower is better)
Translates to: SSWDLQSPTLMY*TLAVMSLQSGS
Trigger: GGAGCCTGATTGCAAAGACATCACAGCCAAGGTGCAGTACATCAAAGTGGGAGATTGTAAGTCCCAAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR CCA 72 bp GCACATCCTCGATGTCAATGGAGTACACAGCTTTGCTaGCACACTTTCCCTGGCAGTAATGAATGTCCACTT +
Preference number: 3 (lower is better)
Translates to: AHPRCQWSTQLC*HTFPGSNECPL
Trigger: AAGTGGACATTCATTACTGCCAGGGAAAGTGTGCCAGCAAAGCTGTGTACTCCATTGACATCGAGGATGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR-3UTR CAA 90 bp CAGGTTATACTCTCACTCCAAGCCAAAAGGCTTATGGAAACCTTCCTCTTGACTAGAGGTCACTCTCTGTaGTGCTGTGGGCTCTCTATC +
Preference number: 3 (lower is better)
Translates to: QVILSLQAKRLMETFLLTRGHSL*CCGLSI
Trigger: GATAGAGAGCCCACAGCACAACAGAGAGTGACCTCT...AGTCAAGAGGAAGGTTTCCATAAGCCTTTTGGCTTGGAGTGAGAGTATAACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR-3UTR CAA 90 bp GGCTTGGGGACACTCCTTTATTTGTTCCTCTTCCCAGTGTTGAATAAATCTCCAATGGAAACCTTCCTCTaGACTTTCCAAAGAAGTTCT +
Preference number: 3 (lower is better)
Translates to: GLGTLLYLFLFPVLNKSPMETFL*TFQRSS
Trigger: AGAACTTCTTTGGAAAGTCAAGAGGAAGGTTTCCAT...TGGAGATTTATTCAACACTGGGAAGAGGAACAAATAAAGGAGTGTCCCCAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CCA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGAGGCTGAGTTGGGGCTaGGGCCTCGGGAGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWRLSWG*GLGSKV
Trigger: GACCTTGCTCCCGAGGCCCCAGCCCCAACTCAGCCT...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp GGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCCTGTGGAGGCTGAGTTaGGGCTGGGGCCTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: GGHKGQEAQGRDLVFWIALWRLS*GWGLGS
Trigger: GCTCCCGAGGCCCCAGCCCCAACTCAGCCTCCACAG...GGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR TCA 90 bp CCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATGACCCAGCAGCAGGATaGCGTACCGGCCCGACTCCA +
Preference number: 4 (lower is better)
Translates to: PRRAQRSGGPREGSGFLDDPAAG*RTGPTP
Trigger: TGGAGTCGGGCCGGTACGTCATCCTGCTGCTGGGTC...ATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR TCA 90 bp GCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCGCTACCTGTGGAGGCTaGGTTGGGGCTGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: AQRSGGPREGSGFLDSQVATCGG*VGAGAS
Trigger: CGAGGCCCCAGCCCCAACTCAGCCTCCACAGGTAGC...GACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR TCA 90 bp GCCCACCGAGATCCAACACTTTTCCAGGAAGAGTGGGAATCGCCCCGCAGTGAGTCCTCGCCAACACACTaGGTGCAGGCCTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: AHRDPTLFQEEWESPRSESSPTH*VQASSG
Trigger: CCCCGAGGAGGCCTGCACTCAGTGTGTTGGCGAGGA...CTCACTGCGGGGCGATTCCCACTCTTCCTGGAAAAGTGTTGGATCTCGGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp TTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGACTGGGGCATCAGTTaGGGGTGCCACCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: FIVGPGGHKGQEAQGRDLDWGIS*GCHQAS
Trigger: GGAGGCCTGGTGGCACCCCCAACTGATGCCCCAGTC...CAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR TCA 90 bp TCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGGGTCCCTGGCCAGGTaGGGGCCAGAACAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SGGPREGSGFLDSQVIAWGSLAR*GPEQAG
Trigger: GCCTGCTTGTTCTGGCCCTCACCTGGCCAGGGACCC...CCATGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR TCA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGGGGAGCTGGACATCCTaGCCATCGATGCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWGSWTS*PSMPTA
Trigger: AGCAGTGGGCATCGATGGTCAGGATGTCCAGCTCCC...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR TCA 90 bp GGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCGCGTACTCTGCACCCTaGTGGAAGCAGGGACACCGC +
Preference number: 4 (lower is better)
Translates to: GGHKGQEAQGRDLVFWIAAYSAP*WKQGHR
Trigger: GCGGTGTCCCTGCTTCCATCAGGGTGCAGAGTACGC...GGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp CCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATTTTCGTGCCGGACCATaGCTGGGGGACAGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PRRAQRSGGPREGSGFLDFRAGP*LGDRGS
Trigger: GCTGCCTCTGTCCCCCAGGCATGGTCCGGCACGAAA...ATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp GCCTTTGAGAGCACTGGACCACACGCAGGCCCACGACAGTATCCTCCATGTCCGGAGTGGAACTGCCCGTaGACACACAAGGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: AFESTGPHAGPRQYPPCPEWNCP*THKGRS
Trigger: GGACCTGCCCTTGTGTGTGCACGGGCAGTTCCACTC...CGGACATGGAGGATACTGTCGTGGGCCTGCGTGTGGTCCAGTGCTCTCAAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp GCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCGTGCCGGACCATGCCTaGGGGACAGAGGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: AQRSGGPREGSGFLDSQVVPDHA*GTEAAR
Trigger: TCTGGCTGCCTCTGTCCCCCAGGCATGGTCCGGCAC...GACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGCCAGTTCCTGCATGTTaGCATGGGGGCCCACCCCAA +
Preference number: 4 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWPVPAC*HGGPPQ
Trigger: TTGGGGTGGGCCCCCATGCCAACATGCAGGAACTGG...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGGCTGAGAGGAGGACCTaGCAGTGGGAGCTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWAERRT*QWELSE
Trigger: CTCTGACAGCTCCCACTGCCAGGTCCTCCTCTCAGC...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp TCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGTGGGAGCTCGGGCTGTaGGACACGGCTGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SGGPREGSGFLDSQVIAWWELGL*DTAGQC
Trigger: GCACTGCCCAGCCGTGTCCCACAGCCCGAGCTCCCA...CCATGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp GGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCGCGAGCCACTTCACATaGGCCACACGTGGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: GGHKGQEAQGRDLVFWIAASHFT*ATRGSS
Trigger: CGAGCTCCCACGTGTGGCCCATGTGAAGTGGCTCGC...GGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
3UTR CAA 72 bp ATGGCGTTGATGACCTCGTGGTACACGACAGAGCCATaGGTGCAGTGCAAGGGCACGCGCATGGGCTCCGTC +
Preference number: 4 (lower is better)
Translates to: MALMTSWYTTEP*VQCKGTRMGSV
Trigger: GACGGAGCCCATGCGCGTGCCCTTGCACTGCACCAATGGCTCTGTCGTGTACCACGAGGTCATCAACGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR TCA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGACAATGGAGAAAGTGTaGTCCTCGCAGTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWTMEKV*SSQSRA
Trigger: GGCCCGGGACTGCGAGGATCACACTTTCTCCATTGT...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGACAGGCTCCCCAGGGTaGCACTTGTGGTACAGTGCA +
Preference number: 4 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWTGSPG*HLWYSA
Trigger: TGCACTGTACCACAAGTGGCACCCTGGGGAGCCTGT...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp GCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCCGGATCTCTCGCACGTaGCGCAGCACCTCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: AQRSGGPREGSGFLDSQVRISRT*RSTSSL
Trigger: CAAGGAGGAGGTGCTGCGGCACGTGCGAGAGATCCG...GACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp TTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGAGTGGAACTGCCCGTaGACACACAAGGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: FIVGPGGHKGQEAQGRDLEWNCP*THKGRS
Trigger: GGACCTGCCCTTGTGTGTGCACGGGCAGTTCCACTC...CAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR GCA 90 bp ACACGCAGGCCCACGACAGTATCCTCCATGTCCGTACAGGTGCACGTGTCACAGTGTGCCGAGTGGAACTaGCCGTGCACACACAAGGGC +
Preference number: 4 (lower is better)
Translates to: TRRPTTVSSMSVQVHVSQCAEWN*PCTHKG
Trigger: GCCCTTGTGTGTGCACGGGCAGTTCCACTCGGCACA...CTGTGACACGTGCACCTGTACGGACATGGAGGATACTGTCGTGGGCCTGCGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR GCA 90 bp AGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCACATGCAGGCTTGTTTTaGCCCGGGGCTGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RSGGPREGSGFLDSQVIAHAGLF*PGAAGP
Trigger: GGGGCCTGCAGCCCCGGGGCAAAACAAGCCTGCATG...TGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp TTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGGACGACAGGCACTGTaGTCAGTCCAGCCGTACAGC +
Preference number: 4 (lower is better)
Translates to: FIVGPGGHKGQEAQGRDLGRQAL*SVQPYS
Trigger: GCTGTACGGCTGGACTGACCACAGTGCCTGTCGTCC...CAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp GGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCTCTACCCGGTCCCCTTaGCTGGGAGAGAAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GGHKGQEAQGRDLVFWIASTRSP*LGEKLC
Trigger: GCACAGCTTCTCTCCCAGCCAAGGGGACCGGGTAGA...GGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TCACAGGTAGTCTTCCTGCACTCCAGCTTGAATCTGGAGATGGCGTCTGTCTGCTGGGAGCTCGGGCTGTaGGACACGGCTGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SQVVFLHSSLNLEMASVCWELGL*DTAGQC
Trigger: GCACTGCCCAGCCGTGTCCCACAGCCCGAGCTCCCA...GCAGACAGACGCCATCTCCAGATTCAAGCTGGAGTGCAGGAAGACTACCTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp GGTGGACACAAACCTTGTCAGGGAGACAGGTGGTCGTGGTGCAGCCACAGTCATGCGAGCCACTTCACATaGGCCACACGTGGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: GGHKPCQGDRWSWCSHSHASHFT*ATRGSS
Trigger: CGAGCTCCCACGTGTGGCCCATGTGAAGTGGCTCGC...ATGACTGTGGCTGCACCACGACCACCTGTCTCCCTGACAAGGTTTGTGTCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR CAA 72 bp GCTGAGGTCAGGAGGTGTTGCAGAGGTCACTCTCTGTaGTGCTGTGGGCTCTCTATCCAGCAGGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: AEVRRCCRGHSL*CCGLSIQQGRG
Trigger: TCCCCTGCCCTGCTGGATAGAGAGCCCACAGCACAACAGAGAGTGACCTCTGCAACACCTCCTGACCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR CAA 72 bp TGCACAAACACTGCATCCTCCACGCGGACACACTCGTaGACGAGGCAGGGGTTCTCAGGAACAGCCCACCGA +
Preference number: 4 (lower is better)
Translates to: CTNTASSTRTHS*TRQGFSGTAHR
Trigger: TCGGTGGGCTGTTCCTGAGAACCCCTGCCTCGTCAACGAGTGTGTCCGCGTGGAGGATGCAGTGTTTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR TCA 90 bp CTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTTCCGAACAGTCCCCTTaGAGCTTCCAGGCGTTTCCG +
Preference number: 4 (lower is better)
Translates to: LYCGPRRAQRSGGPREGSSEQSP*SFQAFP
Trigger: CGGAAACGCCTGGAAGCTTCAAGGGGACTGTTCGGA...AGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR TCA 90 bp AGCCATTGGTGCAGTGCAAGGGCACGCGCATGGGCTCCGTCCTCGAGGGCAGGCCCTTGTTTTGAAAGATaGCATAGGAGCAGCTACCAG +
Preference number: 4 (lower is better)
Translates to: SHWCSARARAWAPSSRAGPCFER*HRSSYQ
Trigger: CTGGTAGCTGCTCCTATGTCATCTTTCAAAACAAGG...GCCTGCCCTCGAGGACGGAGCCCATGCGCGTGCCCTTGCACTGCACCAATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR TCA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCCAGTCTGTGGTaGCCGTGCCATCTCGCAACG +
Preference number: 4 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWFSSLW*PCHLAT
Trigger: CGTTGCGAGATGGCACGGTCACCACAGACTGGAAAA...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR TCA 90 bp CAGGCCTCCACAGGCTCACAGTGGCAGCTAGGACAGCACTCTGAGGTCTCACAGACAGAAGCAGCCTTCTaGGGGATGGTCCCCACAGAA +
Preference number: 4 (lower is better)
Translates to: QASTGSQWQLGQHSEVSQTEAAF*GMVPTE
Trigger: TTCTGTGGGGACCATCCCTCAGAAGGCTGCTTCTGT...CTGTGAGACCTCAGAGTGCTGTCCTAGCTGCCACTGTGAGCCTGTGGAGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR GCA 90 bp CCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATCCTGCTGGGAGGAGATaGCCGTTTACACCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: PRRAQRSGGPREGSGFLDPAGRR*PFTPLF
Trigger: GAACAGCGGTGTAAACGGGCATCTCCTCCCAGCAGG...ATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp GAGGTCAGGAGGTGTTGCAGAGGTCACTCTCTGTTGTGCTGTGGGCTCTCTATCCCTGAGAGAGGGAGGTaGCAGGAGGGTACCGCTTCC +
Preference number: 4 (lower is better)
Translates to: EVRRCCRGHSLLCCGLSIPERGR*QEGTAS
Trigger: GGAAGCGGTACCCTCCTGGCACCTCCCTCTCTCAGG...GATAGAGAGCCCACAGCACAACAGAGAGTGACCTCTGCAACACCTCCTGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR GCA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGGAAGCCATCACTGTGTaGTGGATGCGGAGGTCACCT +
Preference number: 4 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWEAITV*WMRRSP
Trigger: AGGTGACCTCCGCATCCAGCACACAGTGATGGCTTC...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGCAGGAATTCCCACACTaGAGGTACACCTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWQEFPH*RYTWPC
Trigger: ACAGGGCCAGGTGTACCTGCAGTGTGGGAATTCCTG...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp AGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCTGTGCCGAGTGGAACTaGCCGTGCACACACAAGGGC +
Preference number: 4 (lower is better)
Translates to: RRAQRSGGPREGSGFLDSCAEWN*PCTHKG
Trigger: GCCCTTGTGTGTGCACGGGCAGTTCCACTCGGCACA...GCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR GCA 90 bp CTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTCGTCTGTCTGCACGATaGAGCGGCAGGTCGTGCATA +
Preference number: 4 (lower is better)
Translates to: LYCGPRRAQRSGGPREGSRLSAR*SGRSCI
Trigger: TATGCACGACCTGCCGCTGCATCGTGCAGACAGACG...AGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGGCTCTGGCAGGTTCTaGGGCAAGGAGACACACACT +
Preference number: 4 (lower is better)
Translates to: FIVGPGGHKGQEAQGRDLGSGRF*GKETHT
Trigger: AGTGTGTGTCTCCTTGCCCCAGAACCTGCCAGAGCC...CAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp AGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCAGGCAGGCCTCGAACTTaGAGGACGTCAGGAGCGCAC +
Preference number: 4 (lower is better)
Translates to: RSGGPREGSGFLDSQVIAGRPRT*RTSGAH
Trigger: GTGCGCTCCTGACGTCCTCCAAGTTCGAGGCCTGCC...TGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp CCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATGTACACCTGGCCCTGTaGACAGCCCAGAGCACAGAA +
Preference number: 4 (lower is better)
Translates to: PRRAQRSGGPREGSGFLDVHLAL*TAQSTE
Trigger: TTCTGTGCTCTGGGCTGTCCACAGGGCCAGGTGTAC...ATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp GGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCCTGGTAGAGCCCTGGTaGGCAGTAGCAGCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: GGHKGQEAQGRDLVFWIALVEPW*AVAAFK
Trigger: CTTGAAGGCTGCTACTGCCCACCAGGGCTCTACCAG...GGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGCATCCCCAATCTGGCTaGGGCCACCCTCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SGGPREGSGFLDSQVIAWHPQSG*GHPPAA
Trigger: TGCAGCAGGAGGGTGGCCCCAGCCAGATTGGGGATG...CCATGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp GGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCACAGGGCTGATGGTCTaGGACCCAGGTCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GGHKGQEAQGRDLVFWIATGLMV*DPGLQE
Trigger: TTCCTGGAGACCTGGGTCCCAGACCATCAGCCCTGT...GGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp CTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTACACGACAGAGCCATTaGTGCAGTGCAAGGGCACGC +
Preference number: 4 (lower is better)
Translates to: LYCGPRRAQRSGGPREGSTRQSH*CSARAR
Trigger: GCGTGCCCTTGCACTGCACCAATGGCTCTGTCGTGT...AGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR TCA 90 bp TTCCAAAGAAGTTCTCTTCTCTTTGCTTGGTCAGCCCTGCCCTTCAGGTCTCACGGGTCCCTGGCCAGGTaGGGGCCAGAACAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: FQRSSLLFAWSALPFRSHGSLAR*GPEQAG
Trigger: GCCTGCTTGTTCTGGCCCTCACCTGGCCAGGGACCC...GTGAGACCTGAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR TCA 90 bp AGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCAGGACCACAGAGATGCTaGGGTGGTGGTCCCAGACCA +
Preference number: 4 (lower is better)
Translates to: RSGGPREGSGFLDSQVIAGPQRC*GGGPRP
Trigger: TGGTCTGGGACCACCACCTCAGCATCTCTGTGGTCC...TGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR TCA 90 bp TTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGTTTTCCAGTCTGTGGTaGCCGTGCCATCTCGCAACG +
Preference number: 4 (lower is better)
Translates to: FIVGPGGHKGQEAQGRDLFSSLW*PCHLAT
Trigger: CGTTGCGAGATGGCACGGTCACCACAGACTGGAAAA...CAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR TCA 90 bp AGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCTTCAGCAAACGACGCTaGGAGGAGGACCTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RRAQRSGGPREGSGFLDSFSKRR*EEDLAV
Trigger: CACTGCCAGGTCCTCCTCTCAGCGTCGTTTGCTGAA...GCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR TCA 90 bp CCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATTCCTGCACTCCAGCTTaGATCTGGAGATGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: PRRAQRSGGPREGSGFLDSCTPA*IWRWRL
Trigger: CAGACGCCATCTCCAGATTCAAGCTGGAGTGCAGGA...ATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR TCA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGCGTCCTCCTCTTAGCTaGATAGTGCAAGCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWRPPLS*IVQAVG
Trigger: GCCTACAGCTTGCACTATTCAGCTAAGAGGAGGACG...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp CCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCGGCAGGTCAGGTTaGAGGAATTCCCACACTGCA +
Preference number: 4 (lower is better)
Translates to: PRRAQRSGGPREGSGFLDSGRSG*RNSHTA
Trigger: TGCAGTGTGGGAATTCCTGCAACCTGACCTGCCGCT...ATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp TCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGGGCCACCCTCCTGCTaGATGAGGTCCACCAAACTC +
Preference number: 4 (lower is better)
Translates to: SGGPREGSGFLDSQVIAWGPPSC*MRSTKL
Trigger: GAGTTTGGTGGACCTCATGCAGCAGGAGGGTGGCCC...CCATGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp GGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCGCTGGCCCCAGGGCCTaGCAAGATCCTCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GSGFLDSQVIAWVSVGIRAGPRA*QDPQLG
Trigger: GCCCAGCTGAGGATCTTGGCAGGCCCTGGGGCCAGC...GCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp AGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCTGTGGAAGAAGGAGTTaGCCAGGGTGGCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: RRAQRSGGPREGSGFLDSCGRRS*PGWPWW
Trigger: CCACCATGGCCACCCTGGGCAACTCCTTCTTCCACA...GCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp CAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAAGCCAGCCACCACCTTaGAAGCAGAGGGCAGGCACC +
Preference number: 4 (lower is better)
Translates to: QRSGGPREGSGFLDSQVISQPPP*KQRAGT
Trigger: GGTGCCTGCCCTCTGCTTGCAAGGTGGTGGCTGGCT...TATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp CAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATATGTGCAGAGGGTCCCTaGCCAGGTGAGGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: QRSGGPREGSGFLDSQVICAEGP*PGEGQN
Trigger: GTTCTGGCCCTCACCTGGCCAGGGACCCTCTGCACA...TATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp AGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCAGGATCCACCAGAGGGTaGCAGCGGGCAAACACCGAT +
Preference number: 4 (lower is better)
Translates to: RSGGPREGSGFLDSQVIAGSTRG*QRANTD
Trigger: ATCGGTGTTTGCCCGCTGCCACCCTCTGGTGGATCC...TGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp GGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCATATTCCATGCCAGCTaGGCAAGCTGGACGACAGGC +
Preference number: 4 (lower is better)
Translates to: GGHKGQEAQGRDLVFWIAIFHAS*ASWTTG
Trigger: GCCTGTCGTCCAGCTTGCCCAGCTGGCATGGAATAT...GGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp AGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCTGCACCAGAACATACTaGCACTCCCCCGGGAACAGG +
Preference number: 4 (lower is better)
Translates to: RRAQRSGGPREGSGFLDSCTRTY*HSPGNR
Trigger: CCTGTTCCCGGGGGAGTGCCAGTATGTTCTGGTGCA...GCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGTCTGGGGGCACAGTGTaGGTGTCCTCCAGGCTACCA +
Preference number: 4 (lower is better)
Translates to: SGGPREGSGFLDSQVIAWSGGTV*VSSRLP
Trigger: TGGTAGCCTGGAGGACACCCACACTGTGCCCCCAGA...CCATGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp AGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCTTACCACATTGGAGCTaGCCCCAGGGCCTGCCAAGA +
Preference number: 4 (lower is better)
Translates to: RRAQRSGGPREGSGFLDSLPHWS*PQGLPR
Trigger: TCTTGGCAGGCCCTGGGGCCAGCTCCAATGTGGTAA...GCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp GGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCTGCCCAGGGTGGCCATaGTGGAGAGGTCTTCAACTT +
Preference number: 4 (lower is better)
Translates to: GGHKGQEAQGRDLVFWIACPGWP*WRGLQL
Trigger: AAGTTGAAGACCTCTCCACCATGGCCACCCTGGGCA...GGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGAGGAGGACCTGGCAGTaGGAGCTGTCAGAGACGGGA +
Preference number: 4 (lower is better)
Translates to: SGGPREGSGFLDSQVIAWRRTWQ*ELSETG
Trigger: TCCCGTCTCTGACAGCTCCCACTGCCAGGTCCTCCT...CCATGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTGCTGGCAGATGGTATaGAATGTGGCTGGAGCGATG +
Preference number: 4 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWCWQMV*NVAGAM
Trigger: CATCGCTCCAGCCACATTCCATACCATCTGCCAGCA...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp AGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCTTGGTCAGGGTTGGCTaGAGCCCTCCTTCACACGGA +
Preference number: 4 (lower is better)
Translates to: RRAQRSGGPREGSGFLDSLVRVG*SPPSHG
Trigger: TCCGTGTGAAGGAGGGCTCCAGCCAACCCTGACCAA...GCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGCTTTTCCAGGAAGAGTaGGAATCGCCCCGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: FIVGPGGHKGQEAQGRDLLFQEE*ESPRSE
Trigger: CTCACTGCGGGGCGATTCCCACTCTTCCTGGAAAAG...CAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
3UTR CAA 72 bp CTGCAGTTCCGGGGAGAACACCTGCACTGCATGGCGTaGATGACCTCGTGGTACACGACAGAGCCATTGGTG +
Preference number: 4 (lower is better)
Translates to: LQFRGEHLHCMA*MTSWYTTEPLV
Trigger: CACCAATGGCTCTGTCGTGTACCACGAGGTCATCAACGCCATGCAGTGCAGGTGTTCTCCCCGGAACTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR TCA 90 bp AAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGAGTGCGATTGGCCTGTaGCAAGACACTCCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KMRTWPLLWAQEGTKVRRSAIGL*QDTPLG
Trigger: GCCCAGGGGAGTGTCTTGTCACAGGCCAATCGCACT...CCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR TCA 90 bp TCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGTTCAGCAAACGACGCTaGGAGGAGGACCTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SGGPREGSGFLDSQVIAWFSKRR*EEDLAV
Trigger: CACTGCCAGGTCCTCCTCTCAGCGTCGTTTGCTGAA...CCATGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR TCA 90 bp TTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTAGCTGCTCCTCGCCAACACACTaGGTGCAGGCCTCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: FLDSQVIAWVSVGIRCSCSSPTH*VQASSG
Trigger: CCCCGAGGAGGCCTGCACTCAGTGTGTTGGCGAGGA...GCAGCTACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR TCA 90 bp GTTAAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGCGCGGACACACTCGTTaGCGAGGCAGGGGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: VKMRTWPLLWAQEGTKVRRGHTR*RGRGSQ
Trigger: CTGAGAACCCCTGCCTCGTCAACGAGTGTGTCCGCG...CCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR TCA 90 bp CAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAATGGTGGGCAGCCCGTaGCCCTCTTCTCCCAGATGT +
Preference number: 4 (lower is better)
Translates to: QRSGGPREGSGFLDSQVIMVGSP*PSSPRC
Trigger: ACATCTGGGAGAAGAGGGTCACGGGCTGCCCACCAT...TATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGGTCAAGGTCCCCTCCTaGGTCCTAAAATCATCTTCC +
Preference number: 4 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWVKVPS*VLKSSS
Trigger: GGAAGATGATTTTAGGACGCAGGAGGGGACCTTGAC...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp GTTAAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGCCTGAGAGAGGGAGGTaGCAGGAGGGTACCGCTTCC +
Preference number: 4 (lower is better)
Translates to: VKMRTWPLLWAQEGTKVRPERGR*QEGTAS
Trigger: GGAAGCGGTACCCTCCTGGCACCTCCCTCTCTCAGG...CCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp GCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCACCATCGATGCCCACTaGTCCCCCGTGCTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: AQRSGGPREGSGFLDSQVTIDAH*SPVLQF
Trigger: AAACTGAAGCACGGGGGAGCAGTGGGCATCGATGGT...GACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp CAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGGGAGGGTGGGCAGTTaGAGACCCTCCTTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: QRSGGPREGSGFLDSQVIGRVGS*RPSLEQ
Trigger: TTGCTCCAAGGAGGGTCTGCAACTGCCCACCCTCCC...TATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp CCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATCCTCGGGGACACAGCTaGCTTCCAGAAAAACTTGGT +
Preference number: 4 (lower is better)
Translates to: PRRAQRSGGPREGSGFLDPRGHS*LPEKLG
Trigger: ACCAAGTTTTTCTGGAAGGCAGCTGTGTCCCCGAGG...ATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR GCA 90 bp AGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCACCACAGGGTAGACGGTaGCTCGGTGGACACAAACCT +
Preference number: 4 (lower is better)
Translates to: RSGGPREGSGFLDSQVIAPQGRR*LGGHKP
Trigger: AGGTTTGTGTCCACCGAGGCACCGTCTACCCTGTGG...TGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp CCCAGAACAAACAGGAGTTGGGCAGGGCCACCTACTCCCGCTTCAGCTGCTGTATCAGGGCCCAGGAGTTaGCAAAATCATAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PRTNRSWAGPPTPASAAVSGPRS*QNHRGL
Trigger: CAGACCCCTATGATTTTGCCAACTCCTGGGCCCTGA...TACAGCAGCTGAAGCGGGAGTAGGTGGCCCTGCCCAACTCCTGTTTGTTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CCA 90 bp CCCTTCAGGTCTCACAGCTCAGCAACTTCATCCCCAGAACAAACAGGAGTTGGGGGATCCACCAGAGGGTaGCAGCGGGCAAACACCGAT +
Preference number: 4 (lower is better)
Translates to: PFRSHSSATSSPEQTGVGGSTRG*QRANTD
Trigger: ATCGGTGTTTGCCCGCTGCCACCCTCTGGTGGATCC...CCCAACTCCTGTTTGTTCTGGGGATGAAGTTGCTGAGCTGTGAGACCTGAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CCA 90 bp CCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATGACAAGACACTCCCCTaGGCATTCCTCATTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PRRAQRSGGPREGSGFLDDKTLP*AFLIAA
Trigger: TGCAGCAATGAGGAATGCCCAGGGGAGTGTCTTGTC...ATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp GCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCCGGGCCAGCAGATATTaGCAGATCCCACTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: AQRSGGPREGSGFLDSQVRASRY*QIPLKV
Trigger: CACCTTCAGTGGGATCTGCCAATATCTGCTGGCCCG...GACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp CAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAATCCGTGGGGGCTCCTaGCTAGCAGTCAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: QRSGGPREGSGFLDSQVIIRGGS*LAVRSR
Trigger: TCTGCTCCTGACTGCTAGCCAGGAGCCCCCACGGAT...TATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TCCTTCAGCCAGACACTTGTGTTCATCAAATGGTGGGCAGCCCGTGACCCTCTTGCTGAGAGGAGGACCTaGCAGTGGGAGCTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: SFSQTLVFIKWWAARDPLAERRT*QWELSE
Trigger: CTCTGACAGCTCCCACTGCCAGGTCCTCCTCTCAGC...AAGAGGGTCACGGGCTGCCCACCATTTGATGAACACAAGTGTCTGGCTGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp CTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGAGCGATGACCTTGTaGCATTCAGCAAACGACGCT +
Preference number: 4 (lower is better)
Translates to: LYCGPRRAQRSGGPREGSGAMTL*HSANDA
Trigger: AGCGTCGTTTGCTGAATGCCACAAGGTCATCGCTCC...AGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp ATCTCCCACAGCATTCACCCTGGCTCTTCTCTTCCCGATAGCCCATGGGGCAGGGGTATGGAATGTGGCTaGAGCGATGACCTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: ISHSIHPGSSLPDSPWGRGMECG*SDDLVA
Trigger: TGCCACAAGGTCATCGCTCCAGCCACATTCCATACC...CCTGCCCCATGGGCTATCGGGAAGAGAAGAGCCAGGGTGAATGCTGTGGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp TCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGACAGGGCTGATGGTCTaGGACCCAGGTCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SGGPREGSGFLDSQVIAWTGLMV*DPGLQE
Trigger: TTCCTGGAGACCTGGGTCCCAGACCATCAGCCCTGT...CCATGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp ACGCGGACACACTCGTTGACGAGGCAGGGGTTCTCAGGAACAGCCCACCGAGATTTCACACGGAGGCACTaGAGGCAAGTTGCAGTTGAA +
Preference number: 4 (lower is better)
Translates to: TRTHSLTRQGFSGTAHRDFTRRH*RQVAVE
Trigger: TTCAACTGCAACTTGCCTCCAGTGCCTCCGTGTGAA...ATCTCGGTGGGCTGTTCCTGAGAACCCCTGCCTCGTCAACGAGTGTGTCCGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
3UTR CAA 72 bp ACAGCTCAGCAACTTCATCCCCAGAACAAACAGGAGTaGGGCAGGGCCACCTACTCCCGCTTCAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: TAQQLHPQNKQE*GRATYSRFSCC
Trigger: ACAGCAGCTGAAGCGGGAGTAGGTGGCCCTGCCCAACTCCTGTTTGTTCTGGGGATGAAGTTGCTGAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR CAA 72 bp AGAAAAACCTGGCTGACAGCTGTCTTCACAGGGCCTTaGAGAGCACTGGACCACACGCAGGCCCACGACAGT +
Preference number: 4 (lower is better)
Translates to: RKTWLTAVFTGP*RALDHTQAHDS
Trigger: ACTGTCGTGGGCCTGCGTGTGGTCCAGTGCTCTCAAAGGCCCTGTGAAGACAGCTGTCAGCCAGGTTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR TCA 90 bp AAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCAGTCAGGAGCAGAGTaGTATGGGAGGCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: KMRTWPLLWAQEGTKVRRQSGAE*YGRLQG
Trigger: GCCCTGAAGCCTCCCATATCACTCTGCTCCTGACTG...CCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR TCA 90 bp GCAGGCACCTTCCACAGCACTCGCCTTCGTGGAGAACATAAGAAAAACCTGGCTTCTGCCCATCGAAGGTaGCGATGTGCCGAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: AGTFHSTRLRGEHKKNLASAHRR*RCAEWN
Trigger: GTTCCACTCGGCACATCGTCACCTTCGATGGGCAGA...AGCCAGGTTTTTCTTATGTTCTCCACGAAGGCGAGTGCTGTGGAAGGTGCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR TCA 90 bp TCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGACAGAAGCAGCCTTCTaGGGGATGGTCCCCACAGAA +
Preference number: 4 (lower is better)
Translates to: SGGPREGSGFLDSQVIAWTEAAF*GMVPTE
Trigger: TTCTGTGGGGACCATCCCTCAGAAGGCTGCTTCTGT...CCATGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR TCA 90 bp CTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGAGGCAAGTTGCAGTTaGACAGGTCACACACACACT +
Preference number: 4 (lower is better)
Translates to: LYCGPRRAQRSGGPREGSEASCS*TGHTHT
Trigger: AGTGTGTGTGTGACCTGTTCAACTGCAACTTGCCTC...AGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR TCA 90 bp AAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGTCTTCACAGGGCCTTTaGGAGCACTGGACCACACGC +
Preference number: 4 (lower is better)
Translates to: KMRTWPLLWAQEGTKVRRSSQGL*EHWTTR
Trigger: GCGTGTGGTCCAGTGCTCTCAAAGGCCCTGTGAAGA...CCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp TCCACCCTCCGCCCTTCACTGTTGTTCTGTTTAACTAGTGTATTGGGGCTACAGCACGGGGCTTTTCTGTaGAGAGGGTCCCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: STLRPSLLFCLTSVLGLQHGAFL*RGSLAR
Trigger: CCTGGCCAGGGACCCTCTGCACAGAAAAGCCCCGTG...CTGTAGCCCCAATACACTAGTTAAACAGAACAACAGTGAAGGGCGGAGGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR GCA 90 bp AAAGAAGTTCTCTTCTCTTTGCTTGGTCAGCCCTGCCCTTCAGGTCTCACAGCTCCTGAGAGAGGGAGGTaGCAGGAGGGTACCGCTTCC +
Preference number: 4 (lower is better)
Translates to: KEVLFSLLGQPCPSGLTAPERGR*QEGTAS
Trigger: GGAAGCGGTACCCTCCTGGCACCTCCCTCTCTCAGG...AGCTGTGAGACCTGAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR GCA 90 bp GGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCTGCAGATACAAGTGTTaGAGTCCTGAGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GGHKGQEAQGRDLVFWIACRYKC*SPERGR
Trigger: CCTCCCTCTCTCAGGACTGCAACACTTGTATCTGCA...GGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGCCACTTGTGGTACAGTaGATGAAGCCATCTTCACAG +
Preference number: 4 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWPLVVQ*MKPSSQ
Trigger: CTGTGAAGATGGCTTCATGCACTGTACCACAAGTGG...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp AGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCAGGTCCCAGGGTTACTaGCACAGTAATCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: RRAQRSGGPREGSGFLDSRSQGY*HSNPAP
Trigger: TGGTGCAGGATTACTGTGGCAGTAACCCTGGGACCT...GCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGCAAGATCCAGCAGCTTaGTGCAGTAGAAGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWQDPAA*CSRSCA
Trigger: TGCACAACTTCTACTGCAGCAAGCTGCTGGATCTTG...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp TCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGTCTGGCAGCATCTGCTaGTGTGTCCACGGGATCCAA +
Preference number: 4 (lower is better)
Translates to: SGGPREGSGFLDSQVIAWSGSIC*CVHGIQ
Trigger: TTGGATCCCGTGGACACAGCAGCAGATGCTGCCAGA...CCATGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp AAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGGGATCTGGCAGCATCTaGTGCTGTGTCCACGGGATC +
Preference number: 4 (lower is better)
Translates to: KMRTWPLLWAQEGTKVRRGSGSI*CCVHGI
Trigger: GATCCCGTGGACACAGCAGCAGATGCTGCCAGATCC...CCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTGGTGGCAACTGTCTTaGTGGCAGATGGTATGGAAT +
Preference number: 4 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWWWQLS*WQMVWN
Trigger: ATTCCATACCATCTGCCAGCAAGACAGTTGCCACCA...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR GCA 90 bp CTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGAGATGTTCCTCTGCTaGACAAACACTGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: LYCGPRRAQRSGGPREGSEMFLC*TNTASS
Trigger: GGAGGATGCAGTGTTTGTGCAGCAGAGGAACATCTC...AGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp CTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTCAGGAGATGTTCCTCTaGTGCACAAACACTGCATCC +
Preference number: 4 (lower is better)
Translates to: LYCGPRRAQRSGGPREGSQEMFL*CTNTAS
Trigger: GGATGCAGTGTTTGTGCAGCAGAGGAACATCTCCTG...AGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp GGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCGAGCCATTGGTGCAGTaGAAGGGCACGCGCATGGGC +
Preference number: 4 (lower is better)
Translates to: GSGFLDSQVIAWVSVGIREPLVQ*KGTRMG
Trigger: GCCCATGCGCGTGCCCTTGCACTGCACCAATGGCTC...GCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp AGGTCAGGAGGTGTTGCAGAGGTCACTCTCTGTTGTGCTGTGGGCTCTCTATCCTCTCGCAGTTCCTGCTaGGAGGAGATGCCCGTTTAC +
Preference number: 4 (lower is better)
Translates to: RSGGVAEVTLCCAVGSLSSRSSC*EEMPVY
Trigger: GTAAACGGGCATCTCCTCCCAGCAGGAACTGCGAGA...GGATAGAGAGCCCACAGCACAACAGAGAGTGACCTCTGCAACACCTCCTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CCA 90 bp CAGGTCTCACAGCTCAGCAACTTCATCCCCAGAACAAACAGGAGTTGGGCAGGGTCTCGCAGTTCCTGCTaGGAGGAGATGCCCGTTTAC +
Preference number: 4 (lower is better)
Translates to: QVSQLSNFIPRTNRSWAGSRSSC*EEMPVY
Trigger: GTAAACGGGCATCTCCTCCCAGCAGGAACTGCGAGA...CCCTGCCCAACTCCTGTTTGTTCTGGGGATGAAGTTGCTGAGCTGTGAGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CCA 90 bp GAGGTCAGGAGGTGTTGCAGAGGTCACTCTCTGTTGTGCTGTGGGCTCTCTATCATATTCCATGCCAGCTaGGCAAGCTGGACGACAGGC +
Preference number: 4 (lower is better)
Translates to: EVRRCCRGHSLLCCGLSIIFHAS*ASWTTG
Trigger: GCCTGTCGTCCAGCTTGCCCAGCTGGCATGGAATAT...GATAGAGAGCCCACAGCACAACAGAGAGTGACCTCTGCAACACCTCCTGACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CCA 90 bp GGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCCTCTTGAAGTGCGATTaGCCTGTGACAAGACACTCC +
Preference number: 4 (lower is better)
Translates to: GGHKGQEAQGRDLVFWIALLKCD*PVTRHS
Trigger: GGAGTGTCTTGTCACAGGCCAATCGCACTTCAAGAG...GGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp GTTAAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGCAGCCCTTGAGCCCGTaGGTTGTCAGCAGGACACAC +
Preference number: 4 (lower is better)
Translates to: VKMRTWPLLWAQEGTKVRQPLSP*VVSRTH
Trigger: GTGTGTCCTGCTGACAACCCACGGGCTCAAGGGCTG...CCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp GGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCAGAGCATCCCCAATCTaGCTGGGGCCACCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GSGFLDSQVIAWVSVGIRRASPI*LGPPSC
Trigger: GCAGGAGGGTGGCCCCAGCCAGATTGGGGATGCTCT...GCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp ACCTCGTGGTACACGACAGAGCCATTGGTGCAGTGCAAGGGCACGCGCATGGGCAGGATGTGGCCAAGATaGGTAAACCTGACTTCATAC +
Preference number: 4 (lower is better)
Translates to: TSWYTTEPLVQCKGTRMGRMWPR*VNLTSY
Trigger: GTATGAAGTCAGGTTTACCCATCTTGGCCACATCCT...GCCCATGCGCGTGCCCTTGCACTGCACCAATGGCTCTGTCGTGTACCACGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp GGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCGGGCTAAGCTGCAGTTaGAACTCGTTGTTTTGTGGC +
Preference number: 4 (lower is better)
Translates to: GGHKGQEAQGRDLVFWIAGLSCS*NSLFCG
Trigger: GCCACAAAACAACGAGTTCCAACTGCAGCTTAGCCC...GGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp TTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGGGCTAAGCTGCAGTTaGAACTCGTTGTTTTGTGGC +
Preference number: 4 (lower is better)
Translates to: FIVGPGGHKGQEAQGRDLGLSCS*NSLFCG
Trigger: GCCACAAAACAACGAGTTCCAACTGCAGCTTAGCCC...CAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp TTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGTGCACCGTCCATTCCTaGACAAGCCTTTTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: FIVGPGGHKGQEAQGRDLCTVHS*TSLFQS
Trigger: AGACTGGAAAAGGCTTGTCCAGGAATGGACGGTGCA...CAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp ACGCGGACACACTCGTTGACGAGGCAGGGGTTCTCAGGAACAGCCCACCGAGATTGGCAACTGTCTTGCTaGCAGATGGTATGGAATGTG +
Preference number: 4 (lower is better)
Translates to: TRTHSLTRQGFSGTAHRDWQLSC*QMVWNV
Trigger: CACATTCCATACCATCTGCCAGCAAGACAGTTGCCA...ATCTCGGTGGGCTGTTCCTGAGAACCCCTGCCTCGTCAACGAGTGTGTCCGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp AGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATCACACACTCGCTCCTaGTGGCAACTGTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RSGGPREGSGFLDSQVIASHTRS*WQLSCW
Trigger: CCAGCAAGACAGTTGCCACCAGGAGCGAGTGTGTGA...TGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp TTGCCTCCTTCAGCCAGACACTTGTGTTCATCAAATGGTGGGCAGCCCGTGACCTCACACACTCGCTCCTaGTGGCAACTGTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LPPSARHLCSSNGGQPVTSHTRS*WQLSCW
Trigger: CCAGCAAGACAGTTGCCACCAGGAGCGAGTGTGTGA...GGTCACGGGCTGCCCACCATTTGATGAACACAAGTGTCTGGCTGAAGGAGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp AGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCGCTGTGGGACACGGCTaGGCAGTGCAGTTAATCTTT +
Preference number: 4 (lower is better)
Translates to: RRAQRSGGPREGSGFLDSAVGHG*AVQLIF
Trigger: AAAGATTAACTGCACTGCCCAGCCGTGTCCCACAGC...GCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp AGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCGTGTTCATCAAATGGTaGGCAGCCCGTGACCCTCTT +
Preference number: 4 (lower is better)
Translates to: RRAQRSGGPREGSGFLDSVFIKW*AARDPL
Trigger: AAGAGGGTCACGGGCTGCCCACCATTTGATGAACAC...GCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGGTCACAGCAGGTGCCTaGAATTTTCACGATTTTGCC +
Preference number: 4 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWVTAGA*NFHDFA
Trigger: GGCAAAATCGTGAAAATTCCAGGCACCTGCTGTGAC...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR TCA 90 bp ACTCTCACTCCAAGCCAAAAGGCTTATGGAAACCTTCCTCTTGACTTTCCAAAGGGGTCCCTGGCCAGGTaGGGGCCAGAACAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: TLTPSQKAYGNLPLDFPKGSLAR*GPEQAG
Trigger: GCCTGCTTGTTCTGGCCCTCACCTGGCCAGGGACCC...CTTTGGAAAGTCAAGAGGAAGGTTTCCATAAGCCTTTTGGCTTGGAGTGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR GCA 90 bp CTTGACTTTCCAAAGAAGTTCTCTTCTCTTTGCTTGGTCAGCCCTGCCCTTCAGCACGGGGCTTTTCTGTaGAGAGGGTCCCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LDFPKKFSSLCLVSPALQHGAFL*RGSLAR
Trigger: CCTGGCCAGGGACCCTCTGCACAGAAAAGCCCCGTG...CTGAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTTGGAAAGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR GCA 90 bp TCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTCACGGGGCTTTTCTGTaGAGAGGGTCCCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SGFLDSQVIAWVSVGIRCHGAFL*RGSLAR
Trigger: CCTGGCCAGGGACCCTCTGCACAGAAAAGCCCCGTG...ACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp GGAGGTGTTGCAGAGGTCACTCTCTGTTGTGCTGTGGGCTCTCTATCCAGCAGGATAACTGCAGCCCCCTaGAAAGCTGTACATGGTCTC +
Preference number: 4 (lower is better)
Translates to: GGVAEVTLCCAVGSLSSRITAAP*KAVHGL
Trigger: GAGACCATGTACAGCTTTGCAGGGGGCTGCAGTTAT...CCTGCTGGATAGAGAGCCCACAGCACAACAGAGAGTGACCTCTGCAACACCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR GCA 90 bp TTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGTCAGGACTTGGAAGTTaGCATTGCCATCGATTCTGG +
Preference number: 4 (lower is better)
Translates to: FIVGPGGHKGQEAQGRDLSGLGS*HCHRFW
Trigger: CCAGAATCGATGGCAATGGCAACTTCCAAGTCCTGA...CAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp GCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCACTCCTTATATTCCATaGCAGCTGGGCAAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: AQRSGGPREGSGFLDSQVTPYIP*QLGKLD
Trigger: GTCCAGCTTGCCCAGCTGGCATGGAATATAAGGAGT...GACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp CCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATGGCATTCCTCATTGCTaGAGATCCATAGGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: PRRAQRSGGPREGSGFLDGIPHC*RSIGCF
Trigger: GAAACAGCCTATGGATCTGCAGCAATGAGGAATGCC...ATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp GTTAAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGATGCGGAGGTCACCTTaGAGGAAGGGGAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: VKMRTWPLLWAQEGTKVRMRRSP*RKGSWT
Trigger: TGTCCAGCTCCCCTTCCTGCAAGGTGACCTCCGCAT...CCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp CCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATTGTTCCTGGTATGTGTaGTTCAGGACCACAGAGATG +
Preference number: 4 (lower is better)
Translates to: PRRAQRSGGPREGSGFLDCSWYV*FRTTEM
Trigger: CATCTCTGTGGTCCTGAAGCACACATACCAGGAACA...ATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGAGTCATTGTTCTGGATaGCATCAAAGTTCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWSHCSG*HQSSRR
Trigger: TCTGCGGGAACTTTGATGGCATCCAGAACAATGACT...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp TTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTAGCTGCCTGGGGCCACCCTCCTaGTGCATGAGGTCCACCAAA +
Preference number: 4 (lower is better)
Translates to: FLDSQVIAWVSVGIRCSCLGPPS*CMRSTK
Trigger: TTTGGTGGACCTCATGCAGCAGGAGGGTGGCCCCAG...GCAGCTACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp TCTTGGGACTTACAATCTCCCACTTTGATGTACTGCACCTTGGCTGTGATGTCTCATGCAGGCTTGTTTTaGCCCGGGGCTGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SWDLQSPTLMYCTLAVMSHAGLF*PGAAGP
Trigger: GGGGCCTGCAGCCCCGGGGCAAAACAAGCCTGCATG...AGACATCACAGCCAAGGTGCAGTACATCAAAGTGGGAGATTGTAAGTCCCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR GCA 90 bp TTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTAGCTGCCGACAGAGCCATTGGTaGAGTGCAAGGGCACGCGCA +
Preference number: 4 (lower is better)
Translates to: FLDSQVIAWVSVGIRCSCRQSHW*SARARA
Trigger: TGCGCGTGCCCTTGCACTGCACCAATGGCTCTGTCG...GCAGCTACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp CTCTTGACTTTCCAAAGAAGTTCTCTTCTCTTTGCTTGGTCAGCCCTGCCCTTCTGTGCAGAGGGTCCCTaGCCAGGTGAGGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: LLTFQRSSLLFAWSALPFCAEGP*PGEGQN
Trigger: GTTCTGGCCCTCACCTGGCCAGGGACCCTCTGCACA...GAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTTGGAAAGTCAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CCA 90 bp CTTGACTTTCCAAAGAAGTTCTCTTCTCTTTGCTTGGTCAGCCCTGCCCTTCAGTGTGCAGAGGGTCCCTaGCCAGGTGAGGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: LDFPKKFSSLCLVSPALQCAEGP*PGEGQN
Trigger: GTTCTGGCCCTCACCTGGCCAGGGACCCTCTGCACA...CTGAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTTGGAAAGTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CCA 90 bp AGGTCACTCTCTGTTGTGCTGTGGGCTCTCTATCCAGCAGGGCAGGGGAGGGGAGCGTTACGGTGCCATTaGCAAACAAATGGATGTCAA +
Preference number: 4 (lower is better)
Translates to: RSLSVVLWALYPAGQGRGALRCH*QTNGCQ
Trigger: TTGACATCCATTTGTTTGCCAATGGCACCGTAACGC...TCCCCTCCCCTGCCCTGCTGGATAGAGAGCCCACAGCACAACAGAGAGTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CCA 90 bp TCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGTCAGGGCCCAGGAGTTaGCAAAATCATAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SGGPREGSGFLDSQVIAWSGPRS*QNHRGL
Trigger: CAGACCCCTATGATTTTGCCAACTCCTGGGCCCTGA...CCATGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp CAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATATCTCGCAGTTCCTGCTaGGAGGAGATGCCCGTTTAC +
Preference number: 4 (lower is better)
Translates to: QRSGGPREGSGFLDSQVISRSSC*EEMPVY
Trigger: GTAAACGGGCATCTCCTCCCAGCAGGAACTGCGAGA...TATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp CTCTTTGCTTGGTCAGCCCTGCCCTTCAGGTCTCACAGCTCAGCAACTTCATCCTTGATAGACAGGCTCTaGCAGGTTCTGGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LFAWSALPFRSHSSATSSLIDRL*QVLGQG
Trigger: TCCTTGCCCCAGAACCTGCCAGAGCCTGTCTATCAA...GGATGAAGTTGCTGAGCTGTGAGACCTGAAGGGCAGGGCTGACCAAGCAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CCA 90 bp TTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTAGCTGCCACTGCAGGTACACCTaGCCCTGTGGACAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: FLDSQVIAWVSVGIRCSCHCRYT*PCGQPR
Trigger: TCTGGGCTGTCCACAGGGCCAGGTGTACCTGCAGTG...GCAGCTACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp CTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTTGTTGTTGTGGCAAGTaGCAGGGGAAACATCTAGTG +
Preference number: 4 (lower is better)
Translates to: LYCGPRRAQRSGGPREGSCCCGK*QGKHLV
Trigger: CACTAGATGTTTCCCCTGCCACTTGCCACAACAACA...AGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGCCAAGATCCTCAGCTaGGCTTCATCATACCGATCC +
Preference number: 4 (lower is better)
Translates to: SGGPREGSGFLDSQVIAWAKILS*ASSYRS
Trigger: GGATCGGTATGATGAAGCCCAGCTGAGGATCTTGGC...CCATGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp CAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATACCAGGGTGGCCATGGTaGAGAGGTCTTCAACTTGCT +
Preference number: 4 (lower is better)
Translates to: QRSGGPREGSGFLDSQVIPGWPW*RGLQLA
Trigger: AGCAAGTTGAAGACCTCTCCACCATGGCCACCCTGG...TATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp CCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATGTGTATGTGAGGATGTaGCCAAGATGGGTAAACCTG +
Preference number: 4 (lower is better)
Translates to: PRRAQRSGGPREGSGFLDVYVRM*PRWVNL
Trigger: CAGGTTTACCCATCTTGGCCACATCCTCACATACAC...ATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGGAACTCGTTGTTTTGTaGCGTGTATGTGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWELVVL*RVCEDV
Trigger: CACATCCTCACATACACGCCACAAAACAACGAGTTC...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp GGTGGACACAAACCTTGTCAGGGAGACAGGTGGTCGTGGTGCAGCCACAGTCATTGCACCGTCCATTCCTaGACAAGCCTTTTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GGHKPCQGDRWSWCSHSHCTVHS*TSLFQS
Trigger: AGACTGGAAAAGGCTTGTCCAGGAATGGACGGTGCA...ATGACTGTGGCTGCACCACGACCACCTGTCTCCCTGACAAGGTTTGTGTCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp AGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCTGTCTTGCTGGCAGATaGTATGGAATGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RRAQRSGGPREGSGFLDSCLAGR*YGMWLE
Trigger: CTCCAGCCACATTCCATACCATCTGCCAGCAAGACA...GCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp CTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTCCTTCCAGAAAAACTTaGTGTTGGGGACAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LYCGPRRAQRSGGPREGSPSRKT*CWGQKQ
Trigger: CTGCTTCTGTCCCCAACACCAAGTTTTTCTGGAAGG...AGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp GTTAAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGGTTGGTCAGGGTTaGCTGGAGCCCTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: VKMRTWPLLWAQEGTKVRRVGQG*LEPSFT
Trigger: TGTGAAGGAGGGCTCCAGCCAACCCTGACCAACCCT...CCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp GTTAAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGGACAGCCAGCTGTaGGCAGGAGATGTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VKMRTWPLLWAQEGTKVRRDSQL*AGDVPL
Trigger: CAGAGGAACATCTCCTGCCCACAGCTGGCTGTCCCT...CCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGCGTTGATGACCTCGTaGTACACGACAGAGCCATTG +
Preference number: 4 (lower is better)
Translates to: SGGPREGSGFLDSQVIAWALMTS*YTTEPL
Trigger: CAATGGCTCTGTCGTGTACCACGAGGTCATCAACGC...CCATGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR TCA 90 bp GAGGTCAGGAGGTGTTGCAGAGGTCACTCTCTGTTGTGCTGTGGGCTCTCTATCGCCCACAGGTCTTGTTaGAGTGTCTGTCTGACATCA +
Preference number: 4 (lower is better)
Translates to: EVRRCCRGHSLLCCGLSIAHRSC*SVCLTS
Trigger: TGATGTCAGACAGACACTTCAACAAGACCTGTGGGC...GATAGAGAGCCCACAGCACAACAGAGAGTGACCTCTGCAACACCTCCTGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR TCA 90 bp GGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCCAAGTGTTGCAGTCCTaGGAGAGGGAGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GSGFLDSQVIAWVSVGIRQVLQS*EREVPG
Trigger: TCCTGGCACCTCCCTCTCTCAGGACTGCAACACTTG...GCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR TCA 90 bp CAGCCCTGCCCTTCAGGTCTCACAGCTCAGCAACTTCATCCCCAGAACAAACAGGGCAGATCTCATACCTaGAAGGGTTCATCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: QPCPSGLTAQQLHPQNKQGRSHT*KGSSCP
Trigger: TGGGCAAGATGAACCCTTTCAGGTATGAGATCTGCC...CTGTTTGTTCTGGGGATGAAGTTGCTGAGCTGTGAGACCTGAAGGGCAGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112253.6
CDS-3UTR TCA 90 bp TCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTACCACAGAAAGGGCCTaGCCCAGCAGCAGGATGACG +
Preference number: 4 (lower is better)
Translates to: SGFLDSQVIAWVSVGIRCTTERA*PSSRMT
Trigger: CGTCATCCTGCTGCTGGGTCAGGCCCTTTCTGTGGT...ACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR TCA 90 bp GGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTCTGCCCATCGAAGGTaGCGATGTGCCGAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: GSGFLDSQVIAWVSVGIRSAHRR*RCAEWN
Trigger: GTTCCACTCGGCACATCGTCACCTTCGATGGGCAGA...GCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR TCA 90 bp AAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGATGTGGCTGGAGCGATaGCCTTGTGGCATTCAGCAA +
Preference number: 4 (lower is better)
Translates to: KMRTWPLLWAQEGTKVRRMWLER*PCGIQQ
Trigger: TTGCTGAATGCCACAAGGTCATCGCTCCAGCCACAT...CCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR TCA 90 bp AGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCAGAGGCAAGTTGCAGTTaGACAGGTCACACACACACT +
Preference number: 4 (lower is better)
Translates to: RSGGPREGSGFLDSQVIAEASCS*TGHTHT
Trigger: AGTGTGTGTGTGACCTGTTCAACTGCAACTTGCCTC...TGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR GCA 90 bp AAAGAAGTTCTCTTCTCTTTGCTTGGTCAGCCCTGCCCTTCAGGTCTCACAGCTCCTGCTGGGAGGAGATaGCCGTTTACACCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: KEVLFSLLGQPCPSGLTAPAGRR*PFTPLF
Trigger: GAACAGCGGTGTAAACGGGCATCTCCTCCCAGCAGG...AGCTGTGAGACCTGAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR GCA 90 bp AGGTCAGGAGGTGTTGCAGAGGTCACTCTCTGTTGTGCTGTGGGCTCTCTATCCTGCAGATACAAGTGTTaGAGTCCTGAGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RSGGVAEVTLCCAVGSLSCRYKC*SPERGR
Trigger: CCTCCCTCTCTCAGGACTGCAACACTTGTATCTGCA...GGATAGAGAGCCCACAGCACAACAGAGAGTGACCTCTGCAACACCTCCTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR GCA 90 bp GAGGTCAGGAGGTGTTGCAGAGGTCACTCTCTGTTGTGCTGTGGGCTCTCTATCTGCAGATACAAGTGTTaGAGTCCTGAGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: EVRRCCRGHSLLCCGLSICRYKC*SPERGR
Trigger: CCTCCCTCTCTCAGGACTGCAACACTTGTATCTGCA...GATAGAGAGCCCACAGCACAACAGAGAGTGACCTCTGCAACACCTCCTGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR GCA 90 bp TTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTAGCTGCTTCACCAGGCTGTTGTaGAGGGCAGAGAGCCGCACA +
Preference number: 4 (lower is better)
Translates to: FLDSQVIAWVSVGIRCSCFTRLL*RAESRT
Trigger: TGTGCGGCTCTCTGCCCTGCACAACAGCCTGGTGAA...GCAGCTACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp GTTAAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGCACACACATGGTTCGTaGAGTTCCACTTCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: VKMRTWPLLWAQEGTKVRHTHGS*SSTSAP
Trigger: GGGAGCGGAAGTGGAACTGCACGAACCATGTGTGTG...CCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp AAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGGATCCAGCAGCTTGCTaGAGTAGAAGTTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: KMRTWPLLWAQEGTKVRRDPAAC*SRSCAG
Trigger: CCCTGCACAACTTCTACTGCAGCAAGCTGCTGGATC...CCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp GTTAAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGGATGATGATGACCACTaGTTTGGAGGCCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: VKMRTWPLLWAQEGTKVRDDDDH*FGGPRP
Trigger: AGGCCTGGGGCCTCCAAAGCAGTGGTCATCATCATC...CCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp TTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTAAGCTTGAAATTCTaGCCATCGAAGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: FIVGPGGHKGQEAQGRDLVSLKF*PSKVTM
Trigger: CATCGTCACCTTCGATGGGCAGAATTTCAAGCTTAC...CAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR GCA 90 bp TCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGCAGTCTCCCATCCACTaGCATCTCCATGTTACTGTG +
Preference number: 4 (lower is better)
Translates to: SGGPREGSGFLDSQVIAWQSPIH*HLHVTV
Trigger: CACAGTAACATGGAGATGGCAGTGGATGGGAGACTG...CCATGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR GCA 90 bp CAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATACACAGGTTTGTGCTCTaGTTGAGGCGAGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: QRSGGPREGSGFLDSQVIHRFVL*LRRATS
Trigger: TGAAGTGGCTCGCCTCAAGCAGAGCACAAACCTGTG...TATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp TTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGCGTTACGGTGCCATTaGCAAACAAATGGATGTCAA +
Preference number: 4 (lower is better)
Translates to: FIVGPGGHKGQEAQGRDLALRCH*QTNGCQ
Trigger: TTGACATCCATTTGTTTGCCAATGGCACCGTAACGC...CAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp GGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCGGCATTGCTCCCACATaGCCTGATGCATGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GSGFLDSQVIAWVSVGIRGIAPT*PDACPQ
Trigger: CTGGGGACATGCATCAGGCCATGTGGGAGCAATGCC...GCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp CTTGACTTTCCAAAGAAGTTCTCTTCTCTTTGCTTGGTCAGCCCTGCCCTTCAGGGACGACAGGCACTGTaGTCAGTCCAGCCGTACAGC +
Preference number: 4 (lower is better)
Translates to: LDFPKKFSSLCLVSPALQGRQAL*SVQPYS
Trigger: GCTGTACGGCTGGACTGACCACAGTGCCTGTCGTCC...CTGAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTTGGAAAGTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CCA 90 bp TTCCAAAGAAGTTCTCTTCTCTTTGCTTGGTCAGCCCTGCCCTTCAGGTCTCACGGCTCTGGCAGGTTCTaGGGCAAGGAGACACACACT +
Preference number: 4 (lower is better)
Translates to: FQRSSLLFAWSALPFRSHGSGRF*GKETHT
Trigger: AGTGTGTGTCTCCTTGCCCCAGAACCTGCCAGAGCC...GTGAGACCTGAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CCA 90 bp CAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATATTGATAGACAGGCTCTaGCAGGTTCTGGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: QRSGGPREGSGFLDSQVILIDRL*QVLGQG
Trigger: TCCTTGCCCCAGAACCTGCCAGAGCCTGTCTATCAA...TATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp GGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCGCCATCACTGTGTGCTaGATGCGGAGGTCACCTTGC +
Preference number: 4 (lower is better)
Translates to: GSGFLDSQVIAWVSVGIRAITVC*MRRSPC
Trigger: GCAAGGTGACCTCCGCATCCAGCACACAGTGATGGC...GCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp CAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGTGGCGTCACACACATaGTTCGTGCAGTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: QRSGGPREGSGFLDSQVIVASHT*FVQFHF
Trigger: GAAGTGGAACTGCACGAACCATGTGTGTGACGCCAC...TATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTAGCTGCGCACGGGAGCCATCATaGTACTCTACCACTGCCACG +
Preference number: 4 (lower is better)
Translates to: FLDSQVIAWVSVGIRCSCAREPS*YSTTAT
Trigger: CGTGGCAGTGGTAGAGTACCATGATGGCTCCCGTGC...GCAGCTACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTGGAGCTTTACCACATTaGAGCTGGCCCCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SGFLDSQVIAWVSVGIRCGALPH*SWPQGL
Trigger: CAGGCCCTGGGGCCAGCTCCAATGTGGTAAAGCTCC...ACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp GGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCAGGAGTTGCCCAGGGTaGCCATGGTGGAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: GSGFLDSQVIAWVSVGIRRSCPG*PWWRGL
Trigger: AAGACCTCTCCACCATGGCCACCCTGGGCAACTCCT...GCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGCCAGAACACAGTTTGTaGAAGAAGGAGTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SGGPREGSGFLDSQVIAWPEHSL*KKELPR
Trigger: CCTGGGCAACTCCTTCTTCCACAAACTGTGTTCTGG...CCATGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp GTTAAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGACCCGAACAGGAGACTaGCTGTTGGCACATGAAGGC +
Preference number: 4 (lower is better)
Translates to: VKMRTWPLLWAQEGTKVRTRTGD*LLAHEG
Trigger: GCCTTCATGTGCCAACAGCCAGTCTCCTGTTCGGGT...CCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp AAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGGGTATGGAATGTGGCTaGAGCGATGACCTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: KMRTWPLLWAQEGTKVRRGMECG*SDDLVA
Trigger: TGCCACAAGGTCATCGCTCCAGCCACATTCCATACC...CCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TCACAGGTAGTCTTCCTGCACTCCAGCTTGAATCTGGAGATGGCGTCTGTCTGCTGCTGGCAGATGGTATaGAATGTGGCTGGAGCGATG +
Preference number: 4 (lower is better)
Translates to: SQVVFLHSSLNLEMASVCCWQMV*NVAGAM
Trigger: CATCGCTCCAGCCACATTCCATACCATCTGCCAGCA...GCAGACAGACGCCATCTCCAGATTCAAGCTGGAGTGCAGGAAGACTACCTGTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp GGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCCAACACAGACCCCACTaGTCCGACAGAGATGGGCGT +
Preference number: 4 (lower is better)
Translates to: GSGFLDSQVIAWVSVGIRQHRPH*SDRDGR
Trigger: ACGCCCATCTCTGTCGGACCAGTGGGGTCTGTGTTG...GCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp CTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTAGAAAAACTTGGTGTTaGGGACAGAAGCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LYCGPRRAQRSGGPREGSRKTWC*GQKQPS
Trigger: AGAAGGCTGCTTCTGTCCCCAACACCAAGTTTTTCT...AGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp GGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGAAAAACTTGGTGTTaGGGACAGAAGCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GGHKGQEAQGRDLVFWIARKTWC*GQKQPS
Trigger: AGAAGGCTGCTTCTGTCCCCAACACCAAGTTTTTCT...GGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp CTCACAGGTAGTCTTCCTGCACTCCAGCTTGAATCTGGAGATGGCGTCTGTCTGGCTGTGGGACACGGCTaGGCAGTGCAGTTAATCTTT +
Preference number: 4 (lower is better)
Translates to: LTGSLPALQLESGDGVCLAVGHG*AVQLIF
Trigger: AAAGATTAACTGCACTGCCCAGCCGTGTCCCACAGC...CAGACAGACGCCATCTCCAGATTCAAGCTGGAGTGCAGGAAGACTACCTGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp AGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATATTCATCACAGCACTaGGTCTTCCGGAGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: RSGGPREGSGFLDSQVIAYSSQH*VFRRVG
Trigger: ACCCACTCTCCGGAAGACCCAGTGCTGTGATGAATA...TGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp GGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCGGAGACAGGTGGTCGTaGTGCAGCCACAGTCATTGG +
Preference number: 4 (lower is better)
Translates to: GSGFLDSQVIAWVSVGIRGDRWS*CSHSHW
Trigger: CCAATGACTGTGGCTGCACCACGACCACCTGTCTCC...GCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
3UTR CAA 72 bp ACCGGATTGACAGCAATAAGGGCTTCCCGGGAAGGCTaGGGGACACTCCTTTATTTGTTCCTCTTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: TGLTAIRASREG*GTLLYLFLFPV
Trigger: CACTGGGAAGAGGAACAAATAAAGGAGTGTCCCCAAGCCTTCCCGGGAAGCCCTTATTGCTGTCAATCCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112253.6
CDS-3UTR TCA 90 bp GGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCACTGCATGGTCTCTATaGCAATGGAGAAAGTGTGAT +
Preference number: 4 (lower is better)
Translates to: GGHKGQEAQGRDLVFWIATAWSL*QWRKCD
Trigger: ATCACACTTTCTCCATTGTCATAGAGACCATGCAGT...GGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR TCA 90 bp GCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCCCTTGTTTTGAAAGATaGCATAGGAGCAGCTACCAG +
Preference number: 4 (lower is better)
Translates to: AQRSGGPREGSGFLDSQVPCFER*HRSSYQ
Trigger: CTGGTAGCTGCTCCTATGTCATCTTTCAAAACAAGG...GACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR TCA 90 bp GTTAAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGTTTGTGGCGTGTATGTaGGGATGTGGCCAAGATGGG +
Preference number: 4 (lower is better)
Translates to: VKMRTWPLLWAQEGTKVRFVACM*GCGQDG
Trigger: CCCATCTTGGCCACATCCTCACATACACGCCACAAA...CCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp CAGGTCTCACAGCTCAGCAACTTCATCCCCAGAACAAACAGGAGTTGGGCAGGGTCAGGACTTGGAAGTTaGCATTGCCATCGATTCTGG +
Preference number: 4 (lower is better)
Translates to: QVSQLSNFIPRTNRSWAGSGLGS*HCHRFW
Trigger: CCAGAATCGATGGCAATGGCAACTTCCAAGTCCTGA...CCCTGCCCAACTCCTGTTTGTTCTGGGGATGAAGTTGCTGAGCTGTGAGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR GCA 90 bp CTCTTTGCTTGGTCAGCCCTGCCCTTCAGGTCTCACAGCTCAGCAACTTCATCCTCAGGACTTGGAAGTTaGCATTGCCATCGATTCTGG +
Preference number: 4 (lower is better)
Translates to: LFAWSALPFRSHSSATSSSGLGS*HCHRFW
Trigger: CCAGAATCGATGGCAATGGCAACTTCCAAGTCCTGA...GGATGAAGTTGCTGAGCTGTGAGACCTGAAGGGCAGGGCTGACCAAGCAAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR GCA 90 bp GTTAAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGAAAGGCTCCTTTTaGTACGGTGAGACAGGGGAC +
Preference number: 4 (lower is better)
Translates to: VKMRTWPLLWAQEGTKVRRKGSF*YGETGD
Trigger: GTCCCCTGTCTCACCGTAGCAAAAGGAGCCTTTCCT...CCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp GTTAAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGTACTGCAGGGCCTaGCCAGTGTTTGTCCTATTG +
Preference number: 4 (lower is better)
Translates to: VKMRTWPLLWAQEGTKVRRYCRA*PVFVLL
Trigger: CAATAGGACAAACACTGGGCAGGCCCTGCAGTACCT...CCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp CTCACAGGTAGTCTTCCTGCACTCCAGCTTGAATCTGGAGATGGCGTCTGTCTGTCTCAATGGACTTCATaGAGGCTTGTTTTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: LTGSLPALQLESGDGVCLSQWTS*RLVLPR
Trigger: CCGGGGCAAAACAAGCCTGCATGAAGTCCATTGAGA...CAGACAGACGCCATCTCCAGATTCAAGCTGGAGTGCAGGAAGACTACCTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR GCA 90 bp CAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATACAGTCTCCCATCCACTaGCATCTCCATGTTACTGTG +
Preference number: 4 (lower is better)
Translates to: QRSGGPREGSGFLDSQVIQSPIH*HLHVTV
Trigger: CACAGTAACATGGAGATGGCAGTGGATGGGAGACTG...TATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR GCA 90 bp TTGCCTCCTTCAGCCAGACACTTGTGTTCATCAAATGGTGGGCAGCCCGTGACCGTCTTGGGGCTAAGCTaGAGTTGGAACTCGTTGTTT +
Preference number: 4 (lower is better)
Translates to: LPPSARHLCSSNGGQPVTVLGLS*SWNSLF
Trigger: AAACAACGAGTTCCAACTGCAGCTTAGCCCCAAGAC...GGTCACGGGCTGCCCACCATTTGATGAACACAAGTGTCTGGCTGAAGGAGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR GCA 90 bp GTTAAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGCACAGGTTTGTGCTCTaGTTGAGGCGAGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: VKMRTWPLLWAQEGTKVRHRFVL*LRRATS
Trigger: TGAAGTGGCTCGCCTCAAGCAGAGCACAAACCTGTG...CCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp GGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCAGGCAGCAGGAGCATTaGTCCTGCACATCCTCGATG +
Preference number: 4 (lower is better)
Translates to: GSGFLDSQVIAWVSVGIRRQQEH*SCTSSM
Trigger: CATCGAGGATGTGCAGGAGCAATGCTCCTGCTGCCT...GCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TTGTTCCTCTTCCCAGTGTTGAATAAATCTCCACCCTCCGCCCTTCACTGTTGTGGCATTGCTCCCACATaGCCTGATGCATGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LFLFPVLNKSPPSALHCCGIAPT*PDACPQ
Trigger: CTGGGGACATGCATCAGGCCATGTGGGAGCAATGCC...ACAACAGTGAAGGGCGGAGGGTGGAGATTTATTCAACACTGGGAAGAGGAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CCA 90 bp CTTTCCAAAGAAGTTCTCTTCTCTTTGCTTGGTCAGCCCTGCCCTTCAGGTCTCGGTCCCAAGCCTACCTaGGCATTCCTCATTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LSKEVLFSLLGQPCPSGLGPKPT*AFLIAA
Trigger: TGCAGCAATGAGGAATGCCCAGGTAGGCTTGGGACC...GAGACCTGAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTTGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CCA 90 bp TCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTCTCCATCCACCAGGATaGTCACCCGCTTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: SGFLDSQVIAWVSVGIRCLHPPG*SPASCT
Trigger: AGTGCAGGAAGCGGGTGACCATCCTGGTGGATGGAG...ACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTAGCTGCGAGATGCTGAGGTGGTaGTCCCAGACCACAGAAAGG +
Preference number: 4 (lower is better)
Translates to: FLDSQVIAWVSVGIRCSCEMLRW*SQTTER
Trigger: CCTTTCTGTGGTCTGGGACCACCACCTCAGCATCTC...GCAGCTACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTAGCTGCACCTCCTCCTTGGACTaGGCCCCATTGAAGGCATAC +
Preference number: 4 (lower is better)
Translates to: FLDSQVIAWVSVGIRCSCTSSLD*APLKAY
Trigger: GTATGCCTTCAATGGGGCCCAGTCCAAGGAGGAGGT...GCAGCTACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTGTATGTGAGGATGTaGCCAAGATGGGTAAACCTG +
Preference number: 4 (lower is better)
Translates to: SGGPREGSGFLDSQVIAWVYVRM*PRWVNL
Trigger: CAGGTTTACCCATCTTGGCCACATCCTCACATACAC...CCATGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp TGGGACTTACAATCTCCCACTTTGATGTACTGCACCTTGGCTGTGATGTCTTTGAGGAGGACCTGGCAGTaGGAGCTGTCAGAGACGGGA +
Preference number: 4 (lower is better)
Translates to: WDLQSPTLMYCTLAVMSLRRTWQ*ELSETG
Trigger: TCCCGTCTCTGACAGCTCCCACTGCCAGGTCCTCCT...CAAAGACATCACAGCCAAGGTGCAGTACATCAAAGTGGGAGATTGTAAGTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR TCA 90 bp TTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTAGCTGCTTGACCCTGCACAAATaGCTGTCACAGCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: FLDSQVIAWVSVGIRCSCLTLHK*LSQPSW
Trigger: CCAGGATGGCTGTGACAGTCATTTGTGCAGGGTCAA...GCAGCTACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp CCCTTCAGGTCTCACAGCTCAGCAACTTCATCCCCAGAACAAACAGGAGTTGGGGGCATTCCTCATTGCTaGAGATCCATAGGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: PFRSHSSATSSPEQTGVGGIPHC*RSIGCF
Trigger: GAAACAGCCTATGGATCTGCAGCAATGAGGAATGCC...CCCAACTCCTGTTTGTTCTGGGGATGAAGTTGCTGAGCTGTGAGACCTGAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR GCA 90 bp AGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCATGTGTCACAGCAGGTaGCTGGAATTTTCACGATTT +
Preference number: 4 (lower is better)
Translates to: RRAQRSGGPREGSGFLDSMCHSR*LEFSRF
Trigger: AAATCGTGAAAATTCCAGGCACCTGCTGTGACACAT...GCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp CAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATACCCACTTTGATGTACTaGACCTTGGCTGTGATGTCT +
Preference number: 4 (lower is better)
Translates to: QRSGGPREGSGFLDSQVIPTLMY*TLAVMS
Trigger: AGACATCACAGCCAAGGTGCAGTACATCAAAGTGGG...TATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TTCCAAAGAAGTTCTCTTCTCTTTGCTTGGTCAGCCCTGCCCTTCAGGTCTCACTCAGGGCCCAGGAGTTaGCAAAATCATAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: FQRSSLLFAWSALPFRSHSGPRS*QNHRGL
Trigger: CAGACCCCTATGATTTTGCCAACTCCTGGGCCCTGA...GTGAGACCTGAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CCA 90 bp CAGGTTATACTCTCACTCCAAGCCAAAAGGCTTATGGAAACCTTCCTCTTGACTGGATCCACCAGAGGGTaGCAGCGGGCAAACACCGAT +
Preference number: 4 (lower is better)
Translates to: QVILSLQAKRLMETFLLTGSTRG*QRANTD
Trigger: ATCGGTGTTTGCCCGCTGCCACCCTCTGGTGGATCC...AGTCAAGAGGAAGGTTTCCATAAGCCTTTTGGCTTGGAGTGAGAGTATAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CCA 90 bp GGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCGGAGCGATGACCTTGTaGCATTCAGCAAACGACGCT +
Preference number: 4 (lower is better)
Translates to: GSGFLDSQVIAWVSVGIRGAMTL*HSANDA
Trigger: AGCGTCGTTTGCTGAATGCCACAAGGTCATCGCTCC...GCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp CTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTAACATAAGAAAAACCTaGCTGACAGCTGTCTTCACA +
Preference number: 4 (lower is better)
Translates to: LYCGPRRAQRSGGPREGSNIRKT*LTAVFT
Trigger: TGTGAAGACAGCTGTCAGCCAGGTTTTTCTTATGTT...AGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTAGCTGCCTTGTGTTCATCAAATaGTGGGCAGCCCGTGACCCT +
Preference number: 4 (lower is better)
Translates to: FLDSQVIAWVSVGIRCSCLVFIK*WAARDP
Trigger: AGGGTCACGGGCTGCCCACCATTTGATGAACACAAG...GCAGCTACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGATGTCCACTTCCTCTTaGGACTTACAATCTCCCACT +
Preference number: 4 (lower is better)
Translates to: SGGPREGSGFLDSQVIAWMSTSS*DLQSPT
Trigger: AGTGGGAGATTGTAAGTCCCAAGAGGAAGTGGACAT...CCATGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
3UTR CAA 72 bp CCTCTTGACTTTCCAAAGAAGTTCTCTTCTCTTTGCTaGGTCAGCCCTGCCCTTCAGGTCTCACAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PLDFPKKFSSLC*VSPALQVSQLS
Trigger: GCTGAGCTGTGAGACCTGAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTTGGAAAGTCAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR CAA 72 bp AGGGCTTCCCGGGAAGGCTTGGGGACACTCCTTTATTaGTTCCTCTTCCCAGTGTTGAATAAATCTCCACCC +
Preference number: 4 (lower is better)
Translates to: RASREGLGTLLY*FLFPVLNKSPP
Trigger: GGGTGGAGATTTATTCAACACTGGGAAGAGGAACAAATAAAGGAGTGTCCCCAAGCCTTCCCGGGAAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112253.6
3UTR CAA 72 bp GGAATTTTCACGATTTTGCCTCCTTCAGCCAGACACTaGTGTTCATCAAATGGTGGGCAGCCCGTGACCCTC +
Preference number: 4 (lower is better)
Translates to: GIFTILPPSARH*CSSNGGQPVTL
Trigger: GAGGGTCACGGGCTGCCCACCATTTGATGAACACAAGTGTCTGGCTGAAGGAGGCAAAATCGTGAAAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR TCA 90 bp CAGGTTATACTCTCACTCCAAGCCAAAAGGCTTATGGAAACCTTCCTCTTGACTCAAGTGTTGCAGTCCTaGGAGAGGGAGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: QVILSLQAKRLMETFLLTQVLQS*EREVPG
Trigger: TCCTGGCACCTCCCTCTCTCAGGACTGCAACACTTG...AGTCAAGAGGAAGGTTTCCATAAGCCTTTTGGCTTGGAGTGAGAGTATAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR TCA 90 bp GTTAAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGCATCAGGACTCAAGGTaGTTTTCTTTCCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: VKMRTWPLLWAQEGTKVRHQDSR*FSFQEP
Trigger: TGGCTCCTGGAAAGAAAATCACCTTGAGTCCTGATG...CCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR TCA 90 bp TCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTCAGGGACGGTGGGCATaGCATAGCACAGAAATCAGT +
Preference number: 4 (lower is better)
Translates to: SGFLDSQVIAWVSVGIRCQGRWA*HSTEIS
Trigger: ACTGATTTCTGTGCTATGTCATGCCCACCGTCCCTG...ACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp CTTTCCAAAGAAGTTCTCTTCTCTTTGCTTGGTCAGCCCTGCCCTTCAGGTCTCATAACTGCAGCCCCCTaGAAAGCTGTACATGGTCTC +
Preference number: 4 (lower is better)
Translates to: LSKEVLFSLLGQPCPSGLITAAP*KAVHGL
Trigger: GAGACCATGTACAGCTTTGCAGGGGGCTGCAGTTAT...GAGACCTGAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTTGGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR GCA 90 bp TTCCAAAGAAGTTCTCTTCTCTTTGCTTGGTCAGCCCTGCCCTTCAGGTCTCACCACCCTGCGTTACGGTaGCATTGGCAAACAAATGGA +
Preference number: 4 (lower is better)
Translates to: FQRSSLLFAWSALPFRSHHPALR*HWQTNG
Trigger: TCCATTTGTTTGCCAATGGCACCGTAACGCAGGGTG...GTGAGACCTGAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR GCA 90 bp TTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTAGCTGCCACCCTGCGTTACGGTaGCATTGGCAAACAAATGGA +
Preference number: 4 (lower is better)
Translates to: FLDSQVIAWVSVGIRCSCHPALR*HWQTNG
Trigger: TCCATTTGTTTGCCAATGGCACCGTAACGCAGGGTG...GCAGCTACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp CAGGTTATACTCTCACTCCAAGCCAAAAGGCTTATGGAAACCTTCCTCTTGACTCCTGCTGGGAGGAGATaGCCGTTTACACCGCTGTTC +
Preference number: 4 (lower is better)
Translates to: QVILSLQAKRLMETFLLTPAGRR*PFTPLF
Trigger: GAACAGCGGTGTAAACGGGCATCTCCTCCCAGCAGG...AGTCAAGAGGAAGGTTTCCATAAGCCTTTTGGCTTGGAGTGAGAGTATAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR GCA 90 bp TTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTAGCTGCGGGTCATCGGCACACTaGATGGTCTCTATGACAATG +
Preference number: 4 (lower is better)
Translates to: FLDSQVIAWVSVGIRCSCGSSAH*MVSMTM
Trigger: CATTGTCATAGAGACCATGCAGTGTGCCGATGACCC...GCAGCTACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp GTTAAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGCAGGGCGGTCAATTTTaGCAAAGATCTGGAACAGTG +
Preference number: 4 (lower is better)
Translates to: VKMRTWPLLWAQEGTKVRQGGQF*QRSGTV
Trigger: CACTGTTCCAGATCTTTGGCAAAATTGACCGCCCTG...CCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp GGTTATACTCTCACTCCAAGCCAAAAGGCTTATGGAAACCTTCCTCTTGACTTTGGACGACAGGCACTGTaGTCAGTCCAGCCGTACAGC +
Preference number: 4 (lower is better)
Translates to: GYTLTPSQKAYGNLPLDFGRQAL*SVQPYS
Trigger: GCTGTACGGCTGGACTGACCACAGTGCCTGTCGTCC...AAAGTCAAGAGGAAGGTTTCCATAAGCCTTTTGGCTTGGAGTGAGAGTATAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CCA 90 bp CTCTTGACTTTCCAAAGAAGTTCTCTTCTCTTTGCTTGGTCAGCCCTGCCCTTCTTGATAGACAGGCTCTaGCAGGTTCTGGGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LLTFQRSSLLFAWSALPFLIDRL*QVLGQG
Trigger: TCCTTGCCCCAGAACCTGCCAGAGCCTGTCTATCAA...GAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTTGGAAAGTCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CCA 90 bp CTTTATTTGTTCCTCTTCCCAGTGTTGAATAAATCTCCACCCTCCGCCCTTCACGGTCCCAAGCCTACCTaGGCATTCCTCATTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LYLFLFPVLNKSPPSALHGPKPT*AFLIAA
Trigger: TGCAGCAATGAGGAATGCCCAGGTAGGCTTGGGACC...GTGAAGGGCGGAGGGTGGAGATTTATTCAACACTGGGAAGAGGAACAAATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CCA 90 bp CAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAAGGATGTGGCCAAGATaGGTAAACCTGACTTCATAC +
Preference number: 4 (lower is better)
Translates to: QRSGGPREGSGFLDSQVIRMWPR*VNLTSY
Trigger: GTATGAAGTCAGGTTTACCCATCTTGGCCACATCCT...TATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp GTAGTCTTCCTGCACTCCAGCTTGAATCTGGAGATGGCGTCTGTCTGCACGATGGAACTCGTTGTTTTGTaGCGTGTATGTGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: VVFLHSSLNLEMASVCTMELVVL*RVCEDV
Trigger: CACATCCTCACATACACGCCACAAAACAACGAGTTC...CATCGTGCAGACAGACGCCATCTCCAGATTCAAGCTGGAGTGCAGGAAGACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp TTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTAGCTGCTTCACACGGAGGCACTaGAGGCAAGTTGCAGTTGAA +
Preference number: 4 (lower is better)
Translates to: FLDSQVIAWVSVGIRCSCFTRRH*RQVAVE
Trigger: TTCAACTGCAACTTGCCTCCAGTGCCTCCGTGTGAA...GCAGCTACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR TCA 90 bp TCTTGGGACTTACAATCTCCCACTTTGATGTACTGCACCTTGGCTGTGATGTCTATGTGGCTGGAGCGATaGCCTTGTGGCATTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SWDLQSPTLMYCTLAVMSMWLER*PCGIQQ
Trigger: TTGCTGAATGCCACAAGGTCATCGCTCCAGCCACAT...AGACATCACAGCCAAGGTGCAGTACATCAAAGTGGGAGATTGTAAGTCCCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR TCA 90 bp GGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTACAATCTCCCACTTTaGTGTACTGCACCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: GSGFLDSQVIAWVSVGIRYNLPL*CTAPWL
Trigger: CAGCCAAGGTGCAGTACATCAAAGTGGGAGATTGTA...GCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp CTCTTGACTTTCCAAAGAAGTTCTCTTCTCTTTGCTTGGTCAGCCCTGCCCTTCGTCAAGGTCCCCTCCTaGGTCCTAAAATCATCTTCC +
Preference number: 4 (lower is better)
Translates to: LLTFQRSSLLFAWSALPFVKVPS*VLKSSS
Trigger: GGAAGATGATTTTAGGACGCAGGAGGGGACCTTGAC...GAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTTGGAAAGTCAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR GCA 90 bp TTGTTCCTCTTCCCAGTGTTGAATAAATCTCCACCCTCCGCCCTTCACTGTTGTACTCCTTATATTCCATaGCAGCTGGGCAAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LFLFPVLNKSPPSALHCCTPYIP*QLGKLD
Trigger: GTCCAGCTTGCCCAGCTGGCATGGAATATAAGGAGT...ACAACAGTGAAGGGCGGAGGGTGGAGATTTATTCAACACTGGGAAGAGGAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR GCA 90 bp TTCCAAAGAAGTTCTCTTCTCTTTGCTTGGTCAGCCCTGCCCTTCAGGTCTCACGGCATTCCTCATTGCTaGAGATCCATAGGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: FQRSSLLFAWSALPFRSHGIPHC*RSIGCF
Trigger: GAAACAGCCTATGGATCTGCAGCAATGAGGAATGCC...GTGAGACCTGAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR GCA 90 bp TTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTAGCTGCAGTCGTCTCCCTTGTTaGCGTTGTAATTCCCACACA +
Preference number: 4 (lower is better)
Translates to: FLDSQVIAWVSVGIRCSCSRLPC*RCNSHT
Trigger: TGTGTGGGAATTACAACGGCAACAAGGGAGACGACT...GCAGCTACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp TTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTAGCTGCAGCATAGTTAGCTACTaGGTTACACAGGCAATCCCG +
Preference number: 4 (lower is better)
Translates to: FLDSQVIAWVSVGIRCSCSIVSY*VTQAIP
Trigger: CGGGATTGCCTGTGTAACGCAGTAGCTAACTATGCT...GCAGCTACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR GCA 90 bp TCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTTCTCAATGGACTTCATaGAGGCTTGTTTTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: SGFLDSQVIAWVSVGIRCSQWTS*RLVLPR
Trigger: CCGGGGCAAAACAAGCCTGCATGAAGTCCATTGAGA...ACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR GCA 90 bp TCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTATCTCCATGTTACTGTaGAGCTCAGCAGAGACGCCA +
Preference number: 4 (lower is better)
Translates to: SGFLDSQVIAWVSVGIRCISMLL*SSAETP
Trigger: TGGCGTCTCTGCTGAGCTGCACAGTAACATGGAGAT...ACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR GCA 90 bp CTCTTGGGACTTACAATCTCCCACTTTGATGTACTGCACCTTGGCTGTGATGTCATCTCCATGTTACTGTaGAGCTCAGCAGAGACGCCA +
Preference number: 4 (lower is better)
Translates to: LLGLTISHFDVLHLGCDVISMLL*SSAETP
Trigger: TGGCGTCTCTGCTGAGCTGCACAGTAACATGGAGAT...GACATCACAGCCAAGGTGCAGTACATCAAAGTGGGAGATTGTAAGTCCCAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR GCA 90 bp GGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCGTCTTGGGGCTAAGCTaGAGTTGGAACTCGTTGTTT +
Preference number: 4 (lower is better)
Translates to: GSGFLDSQVIAWVSVGIRVLGLS*SWNSLF
Trigger: AAACAACGAGTTCCAACTGCAGCTTAGCCCCAAGAC...GCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR GCA 90 bp GGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGGTGGCAACTGTCTTaGTGGCAGATGGTATGGAAT +
Preference number: 4 (lower is better)
Translates to: GSGFLDSQVIAWVSVGIRWWQLS*WQMVWN
Trigger: ATTCCATACCATCTGCCAGCAAGACAGTTGCCACCA...GCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR GCA 90 bp TGGGACTTACAATCTCCCACTTTGATGTACTGCACCTTGGCTGTGATGTCTTTGCCTCGGGGACACAGCTaGCTTCCAGAAAAACTTGGT +
Preference number: 4 (lower is better)
Translates to: WDLQSPTLMYCTLAVMSLPRGHS*LPEKLG
Trigger: ACCAAGTTTTTCTGGAAGGCAGCTGTGTCCCCGAGG...CAAAGACATCACAGCCAAGGTGCAGTACATCAAAGTGGGAGATTGTAAGTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp CTGCCCTTCAGGTCTCACAGCTCAGCAACTTCATCCCCAGAACAAACAGGAGTTATTCTCTTGCCATCTTaGAAGTTCCCGAGAATGGAG +
Preference number: 4 (lower is better)
Translates to: LPFRSHSSATSSPEQTGVILLPS*KFPRME
Trigger: CTCCATTCTCGGGAACTTCCAAGATGGCAAGAGAAT...AACTCCTGTTTGTTCTGGGGATGAAGTTGCTGAGCTGTGAGACCTGAAGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR TCA 90 bp GTTAAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGTCTACACATTGCTGCTaGCACACTTCATTGATAGAC +
Preference number: 4 (lower is better)
Translates to: VKMRTWPLLWAQEGTKVRSTHCC*HTSLID
Trigger: GTCTATCAATGAAGTGTGTCAGCAGCAATGTGTAGA...CCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR TCA 90 bp AGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCAGTACATCAATGGTATTaGTGCTTCCATACTGTATCA +
Preference number: 4 (lower is better)
Translates to: RSGGPREGSGFLDSQVIAVHQWY*CFHTVS
Trigger: TGATACAGTATGGAAGCATCAATACCATTGATGTAC...TGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR TCA 90 bp CTGGCAGTAATGAATGTCCACTTCCTCTTGGGACTTACAATCTCCCACTTTGATTTTGTGGCGTGTATGTaGGGATGTGGCCAAGATGGG +
Preference number: 4 (lower is better)
Translates to: LAVMNVHFLLGLTISHFDFVACM*GCGQDG
Trigger: CCCATCTTGGCCACATCCTCACATACACGCCACAAA...ATCAAAGTGGGAGATTGTAAGTCCCAAGAGGAAGTGGACATTCATTACTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR GCA 90 bp CTTTATTTGTTCCTCTTCCCAGTGTTGAATAAATCTCCACCCTCCGCCCTTCACCACCCTGCGTTACGGTaGCATTGGCAAACAAATGGA +
Preference number: 4 (lower is better)
Translates to: LYLFLFPVLNKSPPSALHHPALR*HWQTNG
Trigger: TCCATTTGTTTGCCAATGGCACCGTAACGCAGGGTG...GTGAAGGGCGGAGGGTGGAGATTTATTCAACACTGGGAAGAGGAACAAATAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR GCA 90 bp GGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCGTAAGCTTGAAATTCTaGCCATCGAAGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: GSGFLDSQVIAWVSVGIRVSLKF*PSKVTM
Trigger: CATCGTCACCTTCGATGGGCAGAATTTCAAGCTTAC...GCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp AATTCAGGTTATACTCTCACTCCAAGCCAAAAGGCTTATGGAAACCTTCCTCTTGGCATTGCTCCCACATaGCCTGATGCATGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: NSGYTLTPSQKAYGNLPLGIAPT*PDACPQ
Trigger: CTGGGGACATGCATCAGGCCATGTGGGAGCAATGCC...AAGAGGAAGGTTTCCATAAGCCTTTTGGCTTGGAGTGAGAGTATAACCTGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CCA 90 bp CAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATACTTCACAGTAACACATaGTATGGTGGTCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: QRSGGPREGSGFLDSQVILHSNT*YGGLRK
Trigger: TTTTCTCAGACCACCATACCATGTGTTACTGTGAAG...TATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp AGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCATTTTGCCAAAGATCTaGAACAGTGTGTACTTCAAA +
Preference number: 4 (lower is better)
Translates to: RRAQRSGGPREGSGFLDSILPKI*NSVYFK
Trigger: TTTGAAGTACACACTGTTCCAGATCTTTGGCAAAAT...GCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CCA 90 bp TCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTTGGCAACTGTCTTGCTaGCAGATGGTATGGAATGTG +
Preference number: 4 (lower is better)
Translates to: SGFLDSQVIAWVSVGIRCWQLSC*QMVWNV
Trigger: CACATTCCATACCATCTGCCAGCAAGACAGTTGCCA...ACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp CTCTTGGGACTTACAATCTCCCACTTTGATGTACTGCACCTTGGCTGTGATGTCCCTTCCAGAAAAACTTaGTGTTGGGGACAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LLGLTISHFDVLHLGCDVPSRKT*CWGQKQ
Trigger: CTGCTTCTGTCCCCAACACCAAGTTTTTCTGGAAGG...GACATCACAGCCAAGGTGCAGTACATCAAAGTGGGAGATTGTAAGTCCCAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR CCA 90 bp TCCACCCTCCGCCCTTCACTGTTGTTCTGTTTAACTAGTGTATTGGGGCTACAGAGAAGAACTGGGTTTTaGTTCCCAGAACCGATATCA +
Preference number: 4 (lower is better)
Translates to: STLRPSLLFCLTSVLGLQRRTGF*FPEPIS
Trigger: TGATATCGGTTCTGGGAACCAAAACCCAGTTCTTCT...CTGTAGCCCCAATACACTAGTTAAACAGAACAACAGTGAAGGGCGGAGGGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100941.9
CDS-3UTR CCA 90 bp TTCCTCTTCCCAGTGTTGAATAAATCTCCACCCTCCGCCCTTCACTGTTGTTCTGCGTTACGGTGCCATTaGCAAACAAATGGATGTCAA +
Preference number: 4 (lower is better)
Translates to: FLFPVLNKSPPSALHCCSALRCH*QTNGCQ
Trigger: TTGACATCCATTTGTTTGCCAATGGCACCGTAACGC...AGAACAACAGTGAAGGGCGGAGGGTGGAGATTTATTCAACACTGGGAAGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CCA 90 bp AAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCTGAACCACATTCCATaGTACATCAATGGTATTGAT +
Preference number: 4 (lower is better)
Translates to: KMRTWPLLWAQEGTKVRRLNHIP*YINGID
Trigger: ATCAATACCATTGATGTACCATGGAATGTGGTTCAG...CCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
3UTR CAA 72 bp TTGGGGACACTCCTTTATTTGTTCCTCTTCCCAGTGTaGAATAAATCTCCACCCTCCGCCCTTCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: LGTLLYLFLFPV*NKSPPSALHCC
Trigger: ACAACAGTGAAGGGCGGAGGGTGGAGATTTATTCAACACTGGGAAGAGGAACAAATAAAGGAGTGTCCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR TCA 90 bp AAAAGGCTTATGGAAACCTTCCTCTTGACTTTCCAAAGAAGTTCTCTTCTCTTTCAAGTGTTGCAGTCCTaGGAGAGGGAGGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: KRLMETFLLTFQRSSLLFQVLQS*EREVPG
Trigger: TCCTGGCACCTCCCTCTCTCAGGACTGCAACACTTG...AAAGAGAAGAGAACTTCTTTGGAAAGTCAAGAGGAAGGTTTCCATAAGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR GCA 90 bp GGTTATACTCTCACTCCAAGCCAAAAGGCTTATGGAAACCTTCCTCTTGACTTTGTCAAGGTCCCCTCCTaGGTCCTAAAATCATCTTCC +
Preference number: 4 (lower is better)
Translates to: GYTLTPSQKAYGNLPLDFVKVPS*VLKSSS
Trigger: GGAAGATGATTTTAGGACGCAGGAGGGGACCTTGAC...AAAGTCAAGAGGAAGGTTTCCATAAGCCTTTTGGCTTGGAGTGAGAGTATAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CCA 90 bp AAAAGGCTTATGGAAACCTTCCTCTTGACTTTCCAAAGAAGTTCTCTTCTCTTTGGCTCTGGCAGGTTCTaGGGCAAGGAGACACACACT +
Preference number: 4 (lower is better)
Translates to: KRLMETFLLTFQRSSLLFGSGRF*GKETHT
Trigger: AGTGTGTGTCTCCTTGCCCCAGAACCTGCCAGAGCC...AAAGAGAAGAGAACTTCTTTGGAAAGTCAAGAGGAAGGTTTCCATAAGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR GCA 90 bp CAAGCCAAAAGGCTTATGGAAACCTTCCTCTTGACTTTCCAAAGAAGTTCTCTTACTCCTTATATTCCATaGCAGCTGGGCAAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: QAKRLMETFLLTFQRSSLTPYIP*QLGKLD
Trigger: GTCCAGCTTGCCCAGCTGGCATGGAATATAAGGAGT...AAGAGAACTTCTTTGGAAAGTCAAGAGGAAGGTTTCCATAAGCCTTTTGGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR CAA 72 bp TCACTCCAAGCCAAAAGGCTTATGGAAACCTTCCTCTaGACTTTCCAAAGAAGTTCTCTTCTCTTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SLQAKRLMETFL*TFQRSSLLFAW
Trigger: CCAAGCAAAGAGAAGAGAACTTCTTTGGAAAGTCAAGAGGAAGGTTTCCATAAGCCTTTTGGCTTGGAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR TCA 90 bp CAAAAGGCTTATGGAAACCTTCCTCTTGACTTTCCAAAGAAGTTCTCTTCTCTTGGCAGATCTCATACCTaGAAGGGTTCATCACTCTTA +
Preference number: 4 (lower is better)
Translates to: QKAYGNLPLDFPKKFSSLGRSHT*KGSSLL
Trigger: TAAGAGTGATGAACCCTTTCAGGTATGAGATCTGCC...AAGAGAAGAGAACTTCTTTGGAAAGTCAAGAGGAAGGTTTCCATAAGCCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100941.9
CDS-3UTR TCA 90 bp TTGGGGCTACAGAAACTTAGTTGTGTCCTTAAAATTCAGGTTATACTCTCACTCTCTACACATTGCTGCTaGCACACTTCATTGATAGAC +
Preference number: 4 (lower is better)
Translates to: LGLQKLSCVLKIQVILSLSTHCC*HTSLID
Trigger: GTCTATCAATGAAGTGTGTCAGCAGCAATGTGTAGA...GAGTGAGAGTATAACCTGAATTTTAAGGACACAACTAAGTTTCTGTAGCCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
3UTR CAA 72 bp CTCCGCCCTTCACTGTTGTTCTGTTTAACTAGTGTATaGGGGCTACAGAAACTTAGTTGTGTCCTTAAAATT +
Preference number: 4 (lower is better)
Translates to: LRPSLLFCLTSV*GLQKLSCVLKI
Trigger: AATTTTAAGGACACAACTAAGTTTCTGTAGCCCCAATACACTAGTTAAACAGAACAACAGTGAAGGGCGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR TCA 90 bp AAAAGGCTTATGGAAACCTTCCTCTTGACTTTCCAAAGAAGTTCTCTTCTCTTTTCTACACATTGCTGCTaGCACACTTCATTGATAGAC +
Preference number: 4 (lower is better)
Translates to: KRLMETFLLTFQRSSLLFSTHCC*HTSLID
Trigger: GTCTATCAATGAAGTGTGTCAGCAGCAATGTGTAGA...AAAGAGAAGAGAACTTCTTTGGAAAGTCAAGAGGAAGGTTTCCATAAGCCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS GCA 90 bp GCTGAGAGGAGGACCTGGCAGTGGGAGCTGTCAGAGACGGGACACTaGTCCTCGGGAACAGCCTGGCATGTGTACCCTGGCTGCTGCACC +
Preference number: 5 (lower is better)
Translates to: AERRTWQWELSETGH*SSGTAWHVYPGCCT
Trigger: GGTGCAGCAGCCAGGGTACACATGCCAGGCTGTTCCCGAGGAGCAGTGTCCCGTCTCTGACAGCTCCCACTGCCAGGTCCTCCTCTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 90 bp GAGCGGCAGGTCAGGTTGCAGGAATTCCCACACTGCAGGTACACCTaGCCCTGTGGACAGCCCAGAGCACAGAAGCCAGGCTCCCGCCAC +
Preference number: 5 (lower is better)
Translates to: ERQVRLQEFPHCRYT*PCGQPRAQKPGSRH
Trigger: GTGGCGGGAGCCTGGCTTCTGTGCTCTGGGCTGTCCACAGGGCCAGGTGTACCTGCAGTGTGGGAATTCCTGCAACCTGACCTGCCGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp TTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGCCTGTGGAGGCTGAGTaGGGGCTGGGGCCTCGGGAG +
Preference number: 5 (lower is better)
Translates to: FIVGPGGHKGQEAQGRDLPVEAE*GLGPRE
Trigger: CTCCCGAGGCCCCAGCCCCAACTCAGCCTCCACAGG...CAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS TCA 90 bp GCCGCCCACGGCCATCCCAGTCCATCTGCAGGTCCTCCGCATAGCTaGGGCGTACAGAAGCCATCACTGTGTGCTGGATGCGGAGGTCAC +
Preference number: 5 (lower is better)
Translates to: AAHGHPSPSAGPPHS*GVQKPSLCAGCGGH
Trigger: GTGACCTCCGCATCCAGCACACAGTGATGGCTTCTGTACGCCTCAGCTATGCGGAGGACCTGCAGATGGACTGGGATGGCCGTGGGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 90 bp GGACGTCAGGAGCGCACAAGCCTCCTCTGCAAACCTGGTCAAGCGTaGATTCAGGCTGCAGGGGTCGCTGTGTTGCCTGCGCAGGTCCGA +
Preference number: 5 (lower is better)
Translates to: GRQERTSLLCKPGQA*IQAAGVAVLPAQVR
Trigger: TCGGACCTGCGCAGGCAACACAGCGACCCCTGCAGCCTGAATCCACGCTTGACCAGGTTTGCAGAGGAGGCTTGTGCGCTCCTGACGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 90 bp GGTCAGGTTGCAGGAATTCCCACACTGCAGGTACACCTGGCCCTGTaGACAGCCCAGAGCACAGAAGCCAGGCTCCCGCCACCCGATGTG +
Preference number: 5 (lower is better)
Translates to: GQVAGIPTLQVHLAL*TAQSTEARLPPPDV
Trigger: CACATCGGGTGGCGGGAGCCTGGCTTCTGTGCTCTGGGCTGTCCACAGGGCCAGGTGTACCTGCAGTGTGGGAATTCCTGCAACCTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 90 bp AGGGACACCGCTCCAAGGCCACACACTTGTTTTCGTGCCGGACCATaGCTGGGGGACAGAGGCAGCCAGACACACAGCCCAGGCTCATAC +
Preference number: 5 (lower is better)
Translates to: RDTAPRPHTCFRAGP*LGDRGSQTHSPGSY
Trigger: GTATGAGCCTGGGCTGTGTGTCTGGCTGCCTCTGTCCCCCAGGCATGGTCCGGCACGAAAACAAGTGTGTGGCCTTGGAGCGGTGTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 90 bp GGCCGTCGACGGCCTGTCACGGGGCTTTTCTGTGCAGAGGGTCCCTaGCCAGGTGAGGGCCAGAACAAGCAGGCAGATCTCATACCTGAA +
Preference number: 5 (lower is better)
Translates to: GRRRPVTGLFCAEGP*PGEGQNKQADLIPE
Trigger: TTCAGGTATGAGATCTGCCTGCTTGTTCTGGCCCTCACCTGGCCAGGGACCCTCTGCACAGAAAAGCCCCGTGACAGGCCGTCGACGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp CTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGGCTGCAGGCCCCATaGTGGAGGAGCACTTCCAGG +
Preference number: 5 (lower is better)
Translates to: LYCGPRRAQRSGGPREGSGLQAP*WRSTSR
Trigger: CCTGGAAGTGCTCCTCCACAATGGGGCCTGCAGCCC...AGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CAA 90 bp CCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATGAGCCAGCCACCACCTaGCAAGCAGAGGGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: PRRAQRSGGPREGSGFLDEPATT*QAEGRH
Trigger: GTGCCTGCCCTCTGCTTGCAAGGTGGTGGCTGGCTC...ATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS TCA 90 bp GCTTCAGTTTCACCAGGCTGTTGTGCAGGGCAGAGAGCCGCACACTaGCCGAGCGGGTGCAGACAGCATCAGGGTCATCGGCACACTGCA +
Preference number: 5 (lower is better)
Translates to: ASVSPGCCAGQRAAH*PSGCRQHQGHRHTA
Trigger: TGCAGTGTGCCGATGACCCTGATGCTGTCTGCACCCGCTCGGTCAGTGTGCGGCTCTCTGCCCTGCACAACAGCCTGGTGAAACTGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 90 bp CACTGCATTCTTCATCCGGGAGGGAGAGGGAGCGGCAGGTCAGGTTaGAGGAATTCCCACACTGCAGGTACACCTGGCCCTGTGGACAGC +
Preference number: 5 (lower is better)
Translates to: HCILHPGGRGSGRSG*RNSHTAGTPGPVDS
Trigger: GCTGTCCACAGGGCCAGGTGTACCTGCAGTGTGGGAATTCCTGCAACCTGACCTGCCGCTCCCTCTCCCTCCCGGATGAAGAATGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 90 bp CGACAGGCACTGTGGTCAGTCCAGCCGTACAGCACCATCCCTTCCTaGGCGCAGGTTCGGGCATACTCAAGGAGTACAGGACATGCGCAC +
Preference number: 5 (lower is better)
Translates to: RQALWSVQPYSTIPS*AQVRAYSRSTGHAH
Trigger: GTGCGCATGTCCTGTACTCCTTGAGTATGCCCGAACCTGCGCCCAGGAAGGGATGGTGCTGTACGGCTGGACTGACCACAGTGCCTGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CCA 90 bp CGAACTTGGAGGACGTCAGGAGCGCACAAGCCTCCTCTGCAAACCTaGTCAAGCGTGGATTCAGGCTGCAGGGGTCGCTGTGTTGCCTGC +
Preference number: 5 (lower is better)
Translates to: RTWRTSGAHKPPLQT*SSVDSGCRGRCVAC
Trigger: GCAGGCAACACAGCGACCCCTGCAGCCTGAATCCACGCTTGACCAGGTTTGCAGAGGAGGCTTGTGCGCTCCTGACGTCCTCCAAGTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 90 bp GTCGTAGTTCTGGCACGTCTTAGCACACTCCAGCCCTTGAGCCCGTaGGTTGTCAGCAGGACACACCAGCTTGACCATGGGTGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: VVVLARLSTLQPLSP*VVSRTHQLDHGWPA
Trigger: TGCCGGCCACCCATGGTCAAGCTGGTGTGTCCTGCTGACAACCCACGGGCTCAAGGGCTGGAGTGTGCTAAGACGTGCCAGAACTACGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 90 bp ACACCGCTCCAAGGCCACACACTTGTTTTCGTGCCGGACCATGCCTaGGGGACAGAGGCAGCCAGACACACAGCCCAGGCTCATACACTC +
Preference number: 5 (lower is better)
Translates to: TPLQGHTLVFVPDHA*GTEAARHTAQAHTL
Trigger: GAGTGTATGAGCCTGGGCTGTGTGTCTGGCTGCCTCTGTCCCCCAGGCATGGTCCGGCACGAAAACAAGTGTGTGGCCTTGGAGCGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp GGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCTGGCAGGCCTCGAACTaGGAGGACGTCAGGAGCGCA +
Preference number: 5 (lower is better)
Translates to: GGHKGQEAQGRDLVFWIAWQASN*EDVRSA
Trigger: TGCGCTCCTGACGTCCTCCAAGTTCGAGGCCTGCCA...GGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS TCA 90 bp CGTTTCCGAAGTCTACCACCAGGGGCTCCACCAAGCCGGCCGGCGTaGGGAAGTCGTCTCCCTTGTTGCCGTTGTAATTCCCACACAAGC +
Preference number: 5 (lower is better)
Translates to: RFRSLPPGAPPSRPA*GSRLPCCRCNSHTS
Trigger: GCTTGTGTGGGAATTACAACGGCAACAAGGGAGACGACTTCCTCACGCCGGCCGGCTTGGTGGAGCCCCTGGTGGTAGACTTCGGAAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS TCA 90 bp GGTGGTGGTCCCAGACCACAGAAAGGGCCTGACCCAGCAGCAGGATaGCGTACCGGCCCGACTCCACCACCTCAAAGTGAGATTCATCTC +
Preference number: 5 (lower is better)
Translates to: GGGPRPQKGPDPAAG*RTGPTPPPQSEIHL
Trigger: GAGATGAATCTCACTTTGAGGTGGTGGAGTCGGGCCGGTACGTCATCCTGCTGCTGGGTCAGGCCCTTTCTGTGGTCTGGGACCACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS TCA 90 bp CACACACACACTCATACTCTGGGCAGCACAGGTTTGTGCTCTGCTTaGGGCGAGCCACTTCACATGGGCCACACGTGGGAGCTCGGGCTG +
Preference number: 5 (lower is better)
Translates to: HTHTHTLGSTGLCSA*GEPLHMGHTWELGL
Trigger: CAGCCCGAGCTCCCACGTGTGGCCCATGTGAAGTGGCTCGCCTCAAGCAGAGCACAAACCTGTGCTGCCCAGAGTATGAGTGTGTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS GCA 90 bp ACCTTGCAGGAAGGGGAGCTGGACATCCTGACCATCGATGCCCACTaGTCCCCCGTGCTTCAGTTTCACCAGGCTGTTGTGCAGGGCAGA +
Preference number: 5 (lower is better)
Translates to: TLQEGELDILTIDAH*SPVLQFHQAVVQGR
Trigger: TCTGCCCTGCACAACAGCCTGGTGAAACTGAAGCACGGGGGAGCAGTGGGCATCGATGGTCAGGATGTCCAGCTCCCCTTCCTGCAAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 90 bp GGAGGTCACCTTGCAGGAAGGGGAGCTGGACATCCTGACCATCGATaGCCACTGCTCCCCCGTGCTTCAGTTTCACCAGGCTGTTGTGCA +
Preference number: 5 (lower is better)
Translates to: GGHLAGRGAGHPDHR*PLLPRASVSPGCCA
Trigger: TGCACAACAGCCTGGTGAAACTGAAGCACGGGGGAGCAGTGGGCATCGATGGTCAGGATGTCCAGCTCCCCTTCCTGCAAGGTGACCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 90 bp GGTAGAGCCCTGGTGGGCAGTAGCAGCCTTCAAGACAGACTTCACTaGATTCTTCATCCGGGAGGGAGAGGGAGCGGCAGGTCAGGTTGC +
Preference number: 5 (lower is better)
Translates to: GRALVGSSSLQDRLH*ILHPGGRGSGRSGC
Trigger: GCAACCTGACCTGCCGCTCCCTCTCCCTCCCGGATGAAGAATGCAGTGAAGTCTGTCTTGAAGGCTGCTACTGCCCACCAGGGCTCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 90 bp GGACACTGCTCCTCGGGAACAGCCTGGCATGTGTACCCTGGCTGCTaGACCGTCCATTCCTGGACAAGCCTTTTCCAGTCTGTGGTGACC +
Preference number: 5 (lower is better)
Translates to: GHCSSGTAWHVYPGC*TVHSWTSLFQSVVT
Trigger: GGTCACCACAGACTGGAAAAGGCTTGTCCAGGAATGGACGGTGCAGCAGCCAGGGTACACATGCCAGGCTGTTCCCGAGGAGCAGTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS GCA 90 bp ACGGGACACTGCTCCTCGGGAACAGCCTGGCATGTGTACCCTGGCTaGTGCACCGTCCATTCCTGGACAAGCCTTTTCCAGTCTGTGGTG +
Preference number: 5 (lower is better)
Translates to: TGHCSSGTAWHVYPG*CTVHSWTSLFQSVV
Trigger: CACCACAGACTGGAAAAGGCTTGTCCAGGAATGGACGGTGCAGCAGCCAGGGTACACATGCCAGGCTGTTCCCGAGGAGCAGTGTCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS GCA 90 bp CCTTCTGAGGGATGGTCCCCACAGAAGCTAGTGTTCCCATCGCAGTaGCGAGGGCAGCCACGCTCACAGTGGTTATACACCAGGGACGGT +
Preference number: 5 (lower is better)
Translates to: PSEGWSPQKLVFPSQ*RGQPRSQWLYTRDG
Trigger: ACCGTCCCTGGTGTATAACCACTGTGAGCGTGGCTGCCCTCGGCACTGCGATGGGAACACTAGCTTCTGTGGGGACCATCCCTCAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 90 bp TTGAGCCCGTGGGTTGTCAGCAGGACACACCAGCTTGACCATGGGTaGCCGGCAGGAAAGGCTCCTTTTGCTACGGTGAGACAGGGGACT +
Preference number: 5 (lower is better)
Translates to: LSPWVVSRTHQLDHG*PAGKAPFATVRQGT
Trigger: AGTCCCCTGTCTCACCGTAGCAAAAGGAGCCTTTCCTGCCGGCCACCCATGGTCAAGCTGGTGTGTCCTGCTGACAACCCACGGGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 90 bp GGCACAGGTAAAGGTGGGTCTGCATTCTCCAGGGTTGGTCAGGGTTaGCTGGAGCCCTCCTTCACACGGAGGCACTGGAGGCAAGTTGCA +
Preference number: 5 (lower is better)
Translates to: GTGKGGSAFSRVGQG*LEPSFTRRHWRQVA
Trigger: TGCAACTTGCCTCCAGTGCCTCCGTGTGAAGGAGGGCTCCAGCCAACCCTGACCAACCCTGGAGAATGCAGACCCACCTTTACCTGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp GCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCGATGCGGAGGTCACCTaGCAGGAAGGGGAGCTGGAC +
Preference number: 5 (lower is better)
Translates to: AQRSGGPREGSGFLDSQVDAEVT*QEGELD
Trigger: GTCCAGCTCCCCTTCCTGCAAGGTGACCTCCGCATC...GACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGGTCCGAACAGTCCCCTaGAAGCTTCCAGGCGTTTCC +
Preference number: 5 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWVRTVP*KLPGVS
Trigger: GGAAACGCCTGGAAGCTTCAAGGGGACTGTTCGGAC...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp CCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATGAGCGGCAGGTCAGGTaGCAGGAATTCCCACACTGC +
Preference number: 5 (lower is better)
Translates to: PRRAQRSGGPREGSGFLDERQVR*QEFPHC
Trigger: GCAGTGTGGGAATTCCTGCAACCTGACCTGCCGCTC...ATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp AGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCAGGGCTGCAGGCCCCATaGTGGAGGAGCACTTCCAGG +
Preference number: 5 (lower is better)
Translates to: RSGGPREGSGFLDSQVIAGLQAP*WRSTSR
Trigger: CCTGGAAGTGCTCCTCCACAATGGGGCCTGCAGCCC...TGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CAA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGCAGCTCAGCGTGGAGTaGACACAGCTGCAAGCACAC +
Preference number: 5 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWQLSVE*TQLQAH
Trigger: GTGTGCTTGCAGCTGTGTCAACTCCACGCTGAGCTG...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS TCA 90 bp GAATGTGGCTGGAGCGATGACCTTGTGGCATTCAGCAAACGACGCTaGGAGGAGGACCTGGCAGTGGGAGCTGTCAGAGACGGGACACTG +
Preference number: 5 (lower is better)
Translates to: ECGWSDDLVAFSKRR*EEDLAVGAVRDGTL
Trigger: CAGTGTCCCGTCTCTGACAGCTCCCACTGCCAGGTCCTCCTCTCAGCGTCGTTTGCTGAATGCCACAAGGTCATCGCTCCAGCCACATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS GCA 90 bp ATGCATGTCCCCAGAAGAGCTCTCGCAGTTCCTGCTGGGAGGAGATaGCCGTTTACACCGCTGTTCCTCACTGCTCAGGGCCCAGGAGTT +
Preference number: 5 (lower is better)
Translates to: MHVPRRALAVPAGRR*PFTPLFLTAQGPGV
Trigger: AACTCCTGGGCCCTGAGCAGTGAGGAACAGCGGTGTAAACGGGCATCTCCTCCCAGCAGGAACTGCGAGAGCTCTTCTGGGGACATGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS GCA 90 bp CCCACATGGCCTGATGCATGTCCCCAGAAGAGCTCTCGCAGTTCCTaGTGGGAGGAGATGCCCGTTTACACCGCTGTTCCTCACTGCTCA +
Preference number: 5 (lower is better)
Translates to: PTWPDACPQKSSRSS*WEEMPVYTAVPHCS
Trigger: TGAGCAGTGAGGAACAGCGGTGTAAACGGGCATCTCCTCCCAGCAGGAACTGCGAGAGCTCTTCTGGGGACATGCATCAGGCCATGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS GCA 90 bp ACAGGTGTTGCAGCCAATCTTCACTGTGTCTCCCGGGGCGTACTCTaGACCCTGATGGAAGCAGGGACACCGCTCCAAGGCCACACACTT +
Preference number: 5 (lower is better)
Translates to: TGVAANLHCVSRGVL*TLMEAGTPLQGHTL
Trigger: AAGTGTGTGGCCTTGGAGCGGTGTCCCTGCTTCCATCAGGGTGCAGAGTACGCCCCGGGAGACACAGTGAAGATTGGCTGCAACACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 90 bp GGGCCATACCAATGGCAGAGCAAGTGGCGTCACACACATGGTTCGTaGAGTTCCACTTCCGCTCCCGGCAGACACAGGTGTTGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: GPYQWQSKWRHTHGS*SSTSAPGRHRCCSQ
Trigger: TTGGCTGCAACACCTGTGTCTGCCGGGAGCGGAAGTGGAACTGCACGAACCATGTGTGTGACGCCACTTGCTCTGCCATTGGTATGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 90 bp AGGTCACACACACACTCATACTCTGGGCAGCACAGGTTTGTGCTCTaGTTGAGGCGAGCCACTTCACATGGGCCACACGTGGGAGCTCGG +
Preference number: 5 (lower is better)
Translates to: RSHTHSYSGQHRFVL*LRRATSHGPHVGAR
Trigger: CCGAGCTCCCACGTGTGGCCCATGTGAAGTGGCTCGCCTCAAGCAGAGCACAAACCTGTGCTGCCCAGAGTATGAGTGTGTGTGTGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 90 bp ACATGGCCTGATGCATGTCCCCAGAAGAGCTCTCGCAGTTCCTGCTaGGAGGAGATGCCCGTTTACACCGCTGTTCCTCACTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: TWPDACPQKSSRSSC*EEMPVYTAVPHCSG
Trigger: CCCTGAGCAGTGAGGAACAGCGGTGTAAACGGGCATCTCCTCCCAGCAGGAACTGCGAGAGCTCTTCTGGGGACATGCATCAGGCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CCA 90 bp GGGCAAACACCGATGCCGTCTTCAGTAGCTGGCATTGCTCCCACATaGCCTGATGCATGTCCCCAGAAGAGCTCTCGCAGTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GQTPMPSSVAGIAPT*PDACPQKSSRSSCW
Trigger: CCAGCAGGAACTGCGAGAGCTCTTCTGGGGACATGCATCAGGCCATGTGGGAGCAATGCCAGCTACTGAAGACGGCATCGGTGTTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CCA 90 bp TCCTTATATTCCATGCCAGCTGGGCAAGCTGGACGACAGGCACTGTaGTCAGTCCAGCCGTACAGCACCATCCCTTCCTGGGCGCAGGTT +
Preference number: 5 (lower is better)
Translates to: SLYSMPAGQAGRQAL*SVQPYSTIPSWAQV
Trigger: AACCTGCGCCCAGGAAGGGATGGTGCTGTACGGCTGGACTGACCACAGTGCCTGTCGTCCAGCTTGCCCAGCTGGCATGGAATATAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CCA 90 bp GGAACAGCCTGGCATGTGTACCCTGGCTGCTGCACCGTCCATTCCTaGACAAGCCTTTTCCAGTCTGTGGTGACCGTGCCATCTCGCAAC +
Preference number: 5 (lower is better)
Translates to: GTAWHVYPGCCTVHS*TSLFQSVVTVPSRN
Trigger: GTTGCGAGATGGCACGGTCACCACAGACTGGAAAAGGCTTGTCCAGGAATGGACGGTGCAGCAGCCAGGGTACACATGCCAGGCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 90 bp AGAGACGGGACACTGCTCCTCGGGAACAGCCTGGCATGTGTACCCTaGCTGCTGCACCGTCCATTCCTGGACAAGCCTTTTCCAGTCTGT +
Preference number: 5 (lower is better)
Translates to: RDGTLLLGNSLACVP*LLHRPFLDKPFPVC
Trigger: ACAGACTGGAAAAGGCTTGTCCAGGAATGGACGGTGCAGCAGCCAGGGTACACATGCCAGGCTGTTCCCGAGGAGCAGTGTCCCGTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CAA 90 bp AGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCAGGGCCTGCCCAGTGTTaGTCCTATTGCCGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: RSGGPREGSGFLDSQVIAGPAQC*SYCRPG
Trigger: ACCAGGGCGGCAATAGGACAAACACTGGGCAGGCCC...TGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp CACACTCTTCCCGGGCCCAATGATGGTGCCATTGAGCAGGCAGGCCTCCACAGGGGGGCTAAGCTGCAGTaGGAACTCGTTGTTTTGTGG +
Preference number: 5 (lower is better)
Translates to: HTLPGPNDGAIEQAGLHRGAKLQ*ELVVLW
Trigger: CCACAAAACAACGAGTTCCAACTGCAGCTTAGCCCC...CCTGTGGAGGCCTGCCTGCTCAATGGCACCATCATTGGGCCCGGGAAGAGTGTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR CAA 90 bp GGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCTACACGACAGAGCCATaGGTGCAGTGCAAGGGCACG +
Preference number: 5 (lower is better)
Translates to: GGHKGQEAQGRDLVFWIAYTTEP*VQCKGT
Trigger: CGTGCCCTTGCACTGCACCAATGGCTCTGTCGTGTA...GGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS TCA 90 bp CTGCAGATCCATAGGCTGTTTCTGCAGATACAAGTGTTGCAGTCCTaGGAGAGGGAGGTGCCAGGAGGGTACCGCTTCCCAGCGTGCACG +
Preference number: 5 (lower is better)
Translates to: LQIHRLFLQIQVLQS*EREVPGGYRFPACT
Trigger: CGTGCACGCTGGGAAGCGGTACCCTCCTGGCACCTCCCTCTCTCAGGACTGCAACACTTGTATCTGCAGAAACAGCCTATGGATCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS TCA 90 bp CCCAGCAGCAGGATGACGTACCGGCCCGACTCCACCACCTCAAAGTaGGATTCATCTCTCAGGGGCCTCTTAACGTTCACCTCTCCGTCA +
Preference number: 5 (lower is better)
Translates to: PSSRMTYRPDSTTSK*DSSLRGLLTFTSPS
Trigger: TGACGGAGAGGTGAACGTTAAGAGGCCCCTGAGAGATGAATCTCACTTTGAGGTGGTGGAGTCGGGCCGGTACGTCATCCTGCTGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS TCA 90 bp CACACACCTGTTCCTGGTATGTGTGCTTCAGGACCACAGAGATGCTaGGGTGGTGGTCCCAGACCACAGAAAGGGCCTGACCCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: HTPVPGMCASGPQRC*GGGPRPQKGPDPAA
Trigger: TGCTGCTGGGTCAGGCCCTTTCTGTGGTCTGGGACCACCACCTCAGCATCTCTGTGGTCCTGAAGCACACATACCAGGAACAGGTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS TCA 90 bp GATGACCACTGCTTTGGAGGCCCCAGGCCTGGCTCCGTGGATTTGTaGAGTTACATAGCGCACGGCAAAGGCCAGAGCATCCCCAATCTG +
Preference number: 5 (lower is better)
Translates to: DDHCFGGPRPGSVDL*SYIAHGKGQSIPNL
Trigger: CAGATTGGGGATGCTCTGGCCTTTGCCGTGCGCTATGTAACTTCACAAATCCACGGAGCCAGGCCTGGGGCCTCCAAAGCAGTGGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 90 bp ACAGTTCAAGCTCCCCTCCATCCACCAGGATGGTCACCCGCTTCCTaGACTTCACCGAGGGATAGCTGCAACCCTCATTTCCCACCAGGA +
Preference number: 5 (lower is better)
Translates to: TVQAPLHPPGWSPAS*TSPRDSCNPHFPPG
Trigger: TCCTGGTGGGAAATGAGGGTTGCAGCTATCCCTCGGTGAAGTGCAGGAAGCGGGTGACCATCCTGGTGGATGGAGGGGAGCTTGAACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 90 bp AGGTTAGGTGCCTCTACCCGGTCCCCTTGGCTGGGAGAGAAGCTGTaGTCAGAAAGGTACTGCAGGGCCTGCCCAGTGTTTGTCCTATTG +
Preference number: 5 (lower is better)
Translates to: RLGASTRSPWLGEKL*SERYCRACPVFVLL
Trigger: CAATAGGACAAACACTGGGCAGGCCCTGCAGTACCTTTCTGAGCACAGCTTCTCTCCCAGCCAAGGGGACCGGGTAGAGGCACCTAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 90 bp TTCAACTTGCTGGAGCTTTACCACATTGGAGCTGGCCCCAGGGCCTaGCAAGATCCTCAGCTGGGCTTCATCATACCGATCCCCAACCCC +
Preference number: 5 (lower is better)
Translates to: FNLLELYHIGAGPRA*QDPQLGFIIPIPNP
Trigger: GGGGTTGGGGATCGGTATGATGAAGCCCAGCTGAGGATCTTGGCAGGCCCTGGGGCCAGCTCCAATGTGGTAAAGCTCCAGCAAGTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 90 bp ATCTTCTCACACAGAGCCACAAAGGACTCGGGATCCACCAGAGGGTaGCAGCGGGCAAACACCGATGCCGTCTTCAGTAGCTGGCATTGC +
Preference number: 5 (lower is better)
Translates to: IFSHRATKDSGSTRG*QRANTDAVFSSWHC
Trigger: GCAATGCCAGCTACTGAAGACGGCATCGGTGTTTGCCCGCTGCCACCCTCTGGTGGATCCCGAGTCCTTTGTGGCTCTGTGTGAGAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CCA 90 bp GCAAGGAGACACACACTCCTTATATTCCATGCCAGCTGGGCAAGCTaGACGACAGGCACTGTGGTCAGTCCAGCCGTACAGCACCATCCC +
Preference number: 5 (lower is better)
Translates to: ARRHTLLIFHASWAS*TTGTVVSPAVQHHP
Trigger: GGGATGGTGCTGTACGGCTGGACTGACCACAGTGCCTGTCGTCCAGCTTGCCCAGCTGGCATGGAATATAAGGAGTGTGTGTCTCCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CCA 90 bp GGTTCTGGGGCAAGGAGACACACACTCCTTATATTCCATGCCAGCTaGGCAAGCTGGACGACAGGCACTGTGGTCAGTCCAGCCGTACAG +
Preference number: 5 (lower is better)
Translates to: GSGARRHTLLIFHAS*ASWTTGTVVSPAVQ
Trigger: CTGTACGGCTGGACTGACCACAGTGCCTGTCGTCCAGCTTGCCCAGCTGGCATGGAATATAAGGAGTGTGTGTCTCCTTGCCCCAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CCA 90 bp ACTTCACATGGGCCACACGTGGGAGCTCGGGCTGTGGGACACGGCTaGGCAGTGCAGTTAATCTTTCTCCCACTGAGGCACATACAGATC +
Preference number: 5 (lower is better)
Translates to: TSHGPHVGARAVGHG*AVQLIFLPLRHIQI
Trigger: GATCTGTATGTGCCTCAGTGGGAGAAAGATTAACTGCACTGCCCAGCCGTGTCCCACAGCCCGAGCTCCCACGTGTGGCCCATGTGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 90 bp AAGCTAGTGTTCCCATCGCAGTGCCGAGGGCAGCCACGCTCACAGTaGTTATACACCAGGGACGGTGGGCATGACATAGCTCACACACTC +
Preference number: 5 (lower is better)
Translates to: KLVFPSQCRGQPRSQ*LYTRDGGHDIAHTL
Trigger: GAGTGTGTGAGCTATGTCATGCCCACCGTCCCTGGTGTATAACCACTGTGAGCGTGGCTGCCCTCGGCACTGCGATGGGAACACTAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR CAA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGGACAGGCTCATTCTCTaGCCATCTTGGAAGTTCCCG +
Preference number: 5 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWDRLIL*PSWKFP
Trigger: CGGGAACTTCCAAGATGGCAAGAGAATGAGCCTGTC...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp CCCAGAACAAACAGGAGTTGGGCAGGGCCACCTACTCCCGCTTCAGCTGCTGTACCTGGGCATTCCTCATaGCTGCAGATCCATAGGCTG +
Preference number: 5 (lower is better)
Translates to: PRTNRSWAGPPTPASAAVPGHSS*LQIHRL
Trigger: CAGCCTATGGATCTGCAGCAATGAGGAATGCCCAGG...TACAGCAGCTGAAGCGGGAGTAGGTGGCCCTGCCCAACTCCTGTTTGTTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CAA 90 bp AGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCAAGTTTCACCAGGCTGTaGTGCAGGGCAGAGAGCCGC +
Preference number: 5 (lower is better)
Translates to: RSGGPREGSGFLDSQVIASFTRL*CRAESR
Trigger: GCGGCTCTCTGCCCTGCACAACAGCCTGGTGAAACT...TGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp ACCTCGTGGTACACGACAGAGCCATTGGTGCAGTGCAAGGGCACGCGCATGGGCGCCTTCCAGAAAAACTaGGTGTTGGGGACAGAAGCA +
Preference number: 5 (lower is better)
Translates to: TSWYTTEPLVQCKGTRMGAFQKN*VLGTEA
Trigger: TGCTTCTGTCCCCAACACCAAGTTTTTCTGGAAGGC...GCCCATGCGCGTGCCCTTGCACTGCACCAATGGCTCTGTCGTGTACCACGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR CAA 90 bp AGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCAGTGCAGCCACAGTCATaGGTAGTGGCTGAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: RSGGPREGSGFLDSQVIAVQPQS*VVAEAR
Trigger: CCTGGCCTCAGCCACTACCAATGACTGTGGCTGCAC...TGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp GCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCCGGTGGACACAAACCTaGTCAGGGAGACAGGTGGTC +
Preference number: 5 (lower is better)
Translates to: AQRSGGPREGSGFLDSQVRWTQT*SGRQVV
Trigger: GACCACCTGTCTCCCTGACAAGGTTTGTGTCCACCG...GACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp AGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCAACGCGGACACACTCGTaGACGAGGCAGGGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: RSGGPREGSGFLDSQVIATRTHS*TRQGFS
Trigger: TGAGAACCCCTGCCTCGTCAACGAGTGTGTCCGCGT...TGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS TCA 90 bp GGGTGCAGACAGCATCAGGGTCATCGGCACACTGCATGGTCTCTATaGCAATGGAGAAAGTGTGATCCTCGCAGTCCCGGGCCAGCAGAT +
Preference number: 5 (lower is better)
Translates to: GCRQHQGHRHTAWSL*QWRKCDPRSPGPAD
Trigger: ATCTGCTGGCCCGGGACTGCGAGGATCACACTTTCTCCATTGTCATAGAGACCATGCAGTGTGCCGATGACCCTGATGCTGTCTGCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS TCA 90 bp GGCAACTGTCTTGCTGGCAGATGGTATGGAATGTGGCTGGAGCGATaGCCTTGTGGCATTCAGCAAACGACGCTGAGAGGAGGACCTGGC +
Preference number: 5 (lower is better)
Translates to: GNCLAGRWYGMWLER*PCGIQQTTLRGGPG
Trigger: GCCAGGTCCTCCTCTCAGCGTCGTTTGCTGAATGCCACAAGGTCATCGCTCCAGCCACATTCCATACCATCTGCCAGCAAGACAGTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS TCA 90 bp GCTGGAGCCCTCCTTCACACGGAGGCACTGGAGGCAAGTTGCAGTTaGACAGGTCACACACACACTCATACTCTGGGCAGCACAGGTTTG +
Preference number: 5 (lower is better)
Translates to: AGALLHTEALEASCS*TGHTHTHTLGSTGL
Trigger: CAAACCTGTGCTGCCCAGAGTATGAGTGTGTGTGTGACCTGTTCAACTGCAACTTGCCTCCAGTGCCTCCGTGTGAAGGAGGGCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS GCA 90 bp AGTTCCTGCTGGGAGGAGATGCCCGTTTACACCGCTGTTCCTCACTaGTCAGGGCCCAGGAGTTGGCAAAATCATAGGGGTCTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: SSCWEEMPVYTAVPH*SGPRSWQNHRGLRS
Trigger: TGACCTCAGACCCCTATGATTTTGCCAACTCCTGGGCCCTGAGCAGTGAGGAACAGCGGTGTAAACGGGCATCTCCTCCCAGCAGGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS GCA 90 bp GATGTGCACGCCTTTTCGGGCACACTCGGCAGCATAGTTAGCTACTaGGTTACACAGGCAATCCCGGCTGTCGGAGCAGGAGCAAACATC +
Preference number: 5 (lower is better)
Translates to: DVHAFSGTLGSIVSY*VTQAIPAVGAGANI
Trigger: GATGTTTGCTCCTGCTCCGACAGCCGGGATTGCCTGTGTAACGCAGTAGCTAACTATGCTGCCGAGTGTGCCCGAAAAGGCGTGCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 90 bp GGCGCAGGTTCGGGCATACTCAAGGAGTACAGGACATGCGCACTCTaGCCCCGTAGCACACGTACACAAAATCTTCTCACACAGAGCCAC +
Preference number: 5 (lower is better)
Translates to: GAGSGILKEYRTCAL*PRSTRTQNLLTQSH
Trigger: GTGGCTCTGTGTGAGAAGATTTTGTGTACGTGTGCTACGGGGCCAGAGTGCGCATGTCCTGTACTCCTTGAGTATGCCCGAACCTGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CCA 90 bp CTGGGCCTTGGGCACACAGTCCCCTCTTTCATCCTGGTAGAGCCCTaGTGGGCAGTAGCAGCCTTCAAGACAGACTTCACTGCATTCTTC +
Preference number: 5 (lower is better)
Translates to: LGLGHTVPSFILVEP*WAVAAFKTDFTAFF
Trigger: GAAGAATGCAGTGAAGTCTGTCTTGAAGGCTGCTACTGCCCACCAGGGCTCTACCAGGATGAAAGAGGGGACTGTGTGCCCAAGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 90 bp TCTTGCTGGCAGATGGTATGGAATGTGGCTGGAGCGATGACCTTGTaGCATTCAGCAAACGACGCTGAGAGGAGGACCTGGCAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: SCWQMVWNVAGAMTL*HSANDAERRTWQWE
Trigger: CTCCCACTGCCAGGTCCTCCTCTCAGCGTCGTTTGCTGAATGCCACAAGGTCATCGCTCCAGCCACATTCCATACCATCTGCCAGCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 90 bp CTTTCTCCCACTGAGGCACATACAGATCTGACAGGGCTGATGGTCTaGGACCCAGGTCTCCAGGAACTGATGTCGAACTCCATCCTCGCC +
Preference number: 5 (lower is better)
Translates to: LSPTEAHTDLTGLMV*DPGLQELMSNSILA
Trigger: GGCGAGGATGGAGTTCGACATCAGTTCCTGGAGACCTGGGTCCCAGACCATCAGCCCTGTCAGATCTGTATGTGCCTCAGTGGGAGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 90 bp AGGGTTGGTCAGGGTTGGCTGGAGCCCTCCTTCACACGGAGGCACTaGAGGCAAGTTGCAGTTGAACAGGTCACACACACACTCATACTC +
Preference number: 5 (lower is better)
Translates to: RVGQGWLEPSFTRRH*RQVAVEQVTHTLIL
Trigger: GAGTATGAGTGTGTGTGTGACCTGTTCAACTGCAACTTGCCTCCAGTGCCTCCGTGTGAAGGAGGGCTCCAGCCAACCCTGACCAACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGAGCCCACAGGTCTTGTaGAAGTGTCTGTCTGACATC +
Preference number: 5 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWSPQVL*KCLSDI
Trigger: GATGTCAGACAGACACTTCAACAAGACCTGTGGGCT...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp GGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCCTGTTGTCGAAGCTCTaGAAGTGCGATTGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: GGHKGQEAQGRDLVFWIALLSKL*KCDWPV
Trigger: CACAGGCCAATCGCACTTCAAGAGCTTCGACAACAG...GGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp GGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCGCAGGACACACCAGCTaGACCATGGGTGGCCGGCAG +
Preference number: 5 (lower is better)
Translates to: GSGFLDSQVIAWVSVGIRAGHTS*TMGGRQ
Trigger: CTGCCGGCCACCCATGGTCAAGCTGGTGTGTCCTGC...GCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp GTTAAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGTCCAGTTCCTGCATGTaGGCATGGGGGCCCACCCCA +
Preference number: 5 (lower is better)
Translates to: VKMRTWPLLWAQEGTKVRSSSCM*AWGPTP
Trigger: TGGGGTGGGCCCCCATGCCAACATGCAGGAACTGGA...CCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp CAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAATGATGACCACTGCTTaGGAGGCCCCAGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: QRSGGPREGSGFLDSQVIMMTTA*EAPGLA
Trigger: AGCCAGGCCTGGGGCCTCCAAAGCAGTGGTCATCAT...TATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp CCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATCTGGTGGCAACTGTCTaGCTGGCAGATGGTATGGAA +
Preference number: 5 (lower is better)
Translates to: PRRAQRSGGPREGSGFLDLVATV*LADGME
Trigger: TTCCATACCATCTGCCAGCAAGACAGTTGCCACCAG...ATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CAA 90 bp TTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGCAGAAAAACTTGGTGTaGGGGACAGAAGCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: LLWAQEGTKVRRPKGGIWQKNLV*GTEAAF
Trigger: GAAGGCTGCTTCTGTCCCCAACACCAAGTTTTTCTG...CCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CAA 90 bp AGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCACAGGCAGCAGGAGCATaGCTCCTGCACATCCTCGAT +
Preference number: 5 (lower is better)
Translates to: RSGGPREGSGFLDSQVIAQAAGA*LLHILD
Trigger: ATCGAGGATGTGCAGGAGCAATGCTCCTGCTGCCTG...TGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 90 bp TCTCCAGGAACTGATGTCGAACTCCATCCTCGCCAACACACTGAGTaGAGGCCTCCTCGGGGACACAGCTGCCTTCCAGAAAAACTTGGT +
Preference number: 5 (lower is better)
Translates to: SPGTDVELHPRQHTE*RPPRGHSCLPEKLG
Trigger: ACCAAGTTTTTCTGGAAGGCAGCTGTGTCCCCGAGGAGGCCTGCACTCAGTGTGTTGGCGAGGATGGAGTTCGACATCAGTTCCTGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 90 bp GGCCTTGGGCACACAGTCCCCTCTTTCATCCTGGTAGAGCCCTGGTaGGCAGTAGCAGCCTTCAAGACAGACTTCACTGCATTCTTCATC +
Preference number: 5 (lower is better)
Translates to: GLGHTVPSFILVEPW*AVAAFKTDFTAFFI
Trigger: GATGAAGAATGCAGTGAAGTCTGTCTTGAAGGCTGCTACTGCCCACCAGGGCTCTACCAGGATGAAAGAGGGGACTGTGTGCCCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 90 bp AAGCTAGTGTTCCCATCGCAGTGCCGAGGGCAGCCACGCTCACAGTaGTTATACACCAGGGACGGTGGGCATGACATAGCACAGAAATCA +
Preference number: 5 (lower is better)
Translates to: KLVFPSQCRGQPRSQ*LYTRDGGHDIAQKS
Trigger: TGATTTCTGTGCTATGTCATGCCCACCGTCCCTGGTGTATAACCACTGTGAGCGTGGCTGCCCTCGGCACTGCGATGGGAACACTAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp CAGGTCTCACAGCTCAGCAACTTCATCCCCAGAACAAACAGGAGTTGGGCAGGGCCTGGGCATTCCTCATaGCTGCAGATCCATAGGCTG +
Preference number: 5 (lower is better)
Translates to: QVSQLSNFIPRTNRSWAGPGHSS*LQIHRL
Trigger: CAGCCTATGGATCTGCAGCAATGAGGAATGCCCAGG...CCCTGCCCAACTCCTGTTTGTTCTGGGGATGAAGTTGCTGAGCTGTGAGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CAA 90 bp TCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGCCTGGGCATTCCTCATaGCTGCAGATCCATAGGCTG +
Preference number: 5 (lower is better)
Translates to: SGGPREGSGFLDSQVIAWPGHSS*LQIHRL
Trigger: CAGCCTATGGATCTGCAGCAATGAGGAATGCCCAGG...CCATGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp AGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCACGGCAGACACAGGTGTaGCAGCCAATCTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: RSGGPREGSGFLDSQVIARQTQV*QPIFTV
Trigger: CACAGTGAAGATTGGCTGCAACACCTGTGTCTGCCG...TGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp TTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTCTGTTTCATGATGTaGTTGTGGCAAGTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: FIVGPGGHKGQEAQGRDLVCFMM*LWQVAG
Trigger: CCCTGCCACTTGCCACAACAACATCATGAAACAGAC...CAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp GGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCCTCTACCCGGTCCCCTaGGCTGGGAGAGAAGCTGTG +
Preference number: 5 (lower is better)
Translates to: GSGFLDSQVIAWVSVGIRLYPVP*AGREAV
Trigger: CACAGCTTCTCTCCCAGCCAAGGGGACCGGGTAGAG...GCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp TCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTGGGGAGGGTGGGCAGTaGCAGACCCTCCTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: SGFLDSQVIAWVSVGIRCGEGGQ*QTLLGA
Trigger: TGCTCCAAGGAGGGTCTGCAACTGCCCACCCTCCCC...ACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp CAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATATTGTGGAAGAAGGAGTaGCCCAGGGTGGCCATGGTG +
Preference number: 5 (lower is better)
Translates to: QRSGGPREGSGFLDSQVILWKKE*PRVAMV
Trigger: CACCATGGCCACCCTGGGCAACTCCTTCTTCCACAA...TATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp AGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCGGGGCTAAGCTGCAGTaGGAACTCGTTGTTTTGTGG +
Preference number: 5 (lower is better)
Translates to: RRAQRSGGPREGSGFLDSGAKLQ*ELVVLW
Trigger: CCACAAAACAACGAGTTCCAACTGCAGCTTAGCCCC...GCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CAA 90 bp GCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCTTCGAAGCAAAGGTCTaGGGGCTAAGCTGCAGTTGG +
Preference number: 5 (lower is better)
Translates to: AQRSGGPREGSGFLDSQVFEAKV*GLSCSW
Trigger: CCAACTGCAGCTTAGCCCCAAGACCTTTGCTTCGAA...GACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CAA 90 bp AGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCTTCGAAGCAAAGGTCTaGGGGCTAAGCTGCAGTTGG +
Preference number: 5 (lower is better)
Translates to: RRAQRSGGPREGSGFLDSFEAKV*GLSCSW
Trigger: CCAACTGCAGCTTAGCCCCAAGACCTTTGCTTCGAA...GCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CAA 90 bp GCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCTTCCTGCACTCCAGCTaGAATCTGGAGATGGCGTCT +
Preference number: 5 (lower is better)
Translates to: AQRSGGPREGSGFLDSQVFLHSS*NLEMAS
Trigger: AGACGCCATCTCCAGATTCAAGCTGGAGTGCAGGAA...GACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS TCA 90 bp AAGAGCTCTCCCTCAGGGCAGCTACAGCCGTCTACACATTGCTGCTaGCACACTTCATTGATAGACAGGCTCTGGCAGGTTCTGGGGCAA +
Preference number: 5 (lower is better)
Translates to: KSSPSGQLQPSTHCC*HTSLIDRLWQVLGQ
Trigger: TTGCCCCAGAACCTGCCAGAGCCTGTCTATCAATGAAGTGTGTCAGCAGCAATGTGTAGACGGCTGTAGCTGCCCTGAGGGAGAGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS TCA 90 bp CGGGAGCCATCATGGTACTCTACCACTGCCACGCGGATGCGCTTCTaGGAGATGTGTAACCTCTCCATCATGCCCACCACAAAAGCTTTG +
Preference number: 5 (lower is better)
Translates to: REPSWYSTTATRMRF*EMCNLSIMPTTKAL
Trigger: CAAAGCTTTTGTGGTGGGCATGATGGAGAGGTTACACATCTCTCAGAAGCGCATCCGCGTGGCAGTGGTAGAGTACCATGATGGCTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 90 bp GGGGCAAGGACCAGTCTCCCATCCACTGCCATCTCCATGTTACTGTaGAGCTCAGCAGAGACGCCAGCATGCTTAATCTCAATGGACTTC +
Preference number: 5 (lower is better)
Translates to: GARTSLPSTAISMLL*SSAETPACLISMDF
Trigger: GAAGTCCATTGAGATTAAGCATGCTGGCGTCTCTGCTGAGCTGCACAGTAACATGGAGATGGCAGTGGATGGGAGACTGGTCCTTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 90 bp TCACACACTCGCTCCTGGTGGCAACTGTCTTGCTGGCAGATGGTATaGAATGTGGCTGGAGCGATGACCTTGTGGCATTCAGCAAACGAC +
Preference number: 5 (lower is better)
Translates to: SHTRSWWQLSCWQMV*NVAGAMTLWHSAND
Trigger: GTCGTTTGCTGAATGCCACAAGGTCATCGCTCCAGCCACATTCCATACCATCTGCCAGCAAGACAGTTGCCACCAGGAGCGAGTGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 90 bp GAAGCAATCACCTCACACACTCGCTCCTGGTGGCAACTGTCTTGCTaGCAGATGGTATGGAATGTGGCTGGAGCGATGACCTTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: EAITSHTRSWWQLSC*QMVWNVAGAMTLWH
Trigger: ATGCCACAAGGTCATCGCTCCAGCCACATTCCATACCATCTGCCAGCAAGACAGTTGCCACCAGGAGCGAGTGTGTGAGGTGATTGCTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp CCCAGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAAGGTGAAGTACCTGTaGTCGAAGCTCTTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: PRRAQRSGGPREGSGFLDKVKYL*SKLLKC
Trigger: GCACTTCAAGAGCTTCGACAACAGGTACTTCACCTT...ATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp TCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTCGCAGCACCTCCTCCTaGGACTGGGCCCCATTGAAG +
Preference number: 5 (lower is better)
Translates to: SGFLDSQVIAWVSVGIRCRSTSS*DWAPLK
Trigger: CTTCAATGGGGCCCAGTCCAAGGAGGAGGTGCTGCG...ACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp TCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTGACCACATCCAGGGGTaGGCTGCAGTCAGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: SGFLDSQVIAWVSVGIRCDHIQG*AAVRER
Trigger: CCTCTCCCTGACTGCAGCCAACCCCTGGATGTGGTC...ACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp TATCCTCCATGTCCGTACAGGTGCACGTGTCACAGCCCTCCTCCCAGAACTGGCCAGCTACCAGTAAGCTaGAAATTCTGCCCATCGAAG +
Preference number: 5 (lower is better)
Translates to: YPPCPYRCTCHSPPPRTGQLPVS*KFCPSK
Trigger: CTTCGATGGGCAGAATTTCAAGCTTACTGGTAGCTG...GCCAGTTCTGGGAGGAGGGCTGTGACACGTGCACCTGTACGGACATGGAGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR CAA 90 bp CTGTCTGCACGATGCAGCGGCAGGTCGTGCATAGGTCAACCATCACACTCTTCCCAGAAAAACTTGGTGTaGGGGACAGAAGCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: LSARCSGRSCIGQPSHSSQKNLV*GTEAAF
Trigger: GAAGGCTGCTTCTGTCCCCAACACCAAGTTTTTCTG...GGAAGAGTGTGATGGTTGACCTATGCACGACCTGCCGCTGCATCGTGCAGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR CAA 90 bp AGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCAGGTGGGGACACTCTTTaGCACTCTTCTTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: RSGGPREGSGFLDSQVIAGGDTL*HSSFLQ
Trigger: CTGCAGGAAAGAAGAGTGCAAAAGAGTGTCCCCACC...TGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp GTTAAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGGTCTTCACAGGGCCTTaGAGAGCACTGGACCACACG +
Preference number: 5 (lower is better)
Translates to: VKMRTWPLLWAQEGTKVRVFTGP*RALDHT
Trigger: CGTGTGGTCCAGTGCTCTCAAAGGCCCTGTGAAGAC...CCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 90 bp GGAACGTTTCTGGCAGTCCCCAGCCAGGAGATAACTGCAGCCCCCTaGAAAGCTGTACATGGTCTCATCAAACGTGTTGATGAAGTCGTC +
Preference number: 5 (lower is better)
Translates to: GTFLAVPSQEITAAP*KAVHGLIKRVDEVV
Trigger: GACGACTTCATCAACACGTTTGATGAGACCATGTACAGCTTTGCAGGGGGCTGCAGTTATCTCCTGGCTGGGGACTGCCAGAAACGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS GCA 90 bp ACTGCCATCTCCATGTTACTGTGCAGCTCAGCAGAGACGCCAGCATaGTTAATCTCAATGGACTTCATGCAGGCTTGTTTTGCCCCGGGG +
Preference number: 5 (lower is better)
Translates to: TAISMLLCSSAETPA*LISMDFMQACFAPG
Trigger: CCCCGGGGCAAAACAAGCCTGCATGAAGTCCATTGAGATTAAGCATGCTGGCGTCTCTGCTGAGCTGCACAGTAACATGGAGATGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 90 bp CCACTGAAGGTGAAGTACCTGTTGTCGAAGCTCTTGAAGTGCGATTaGCCTGTGACAAGACACTCCCCTGGGCATTCCTCATTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: PLKVKYLLSKLLKCD*PVTRHSPGHSSLLQ
Trigger: CTGCAGCAATGAGGAATGCCCAGGGGAGTGTCTTGTCACAGGCCAATCGCACTTCAAGAGCTTCGACAACAGGTACTTCACCTTCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 90 bp TGGAGGCAAGTTGCAGTTGAACAGGTCACACACACACTCATACTCTaGGCAGCACAGGTTTGTGCTCTGCTTGAGGCGAGCCACTTCACA +
Preference number: 5 (lower is better)
Translates to: WRQVAVEQVTHTLIL*AAQVCALLEASHFT
Trigger: TGTGAAGTGGCTCGCCTCAAGCAGAGCACAAACCTGTGCTGCCCAGAGTATGAGTGTGTGTGTGACCTGTTCAACTGCAACTTGCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CAA 90 bp AAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGGCTCTTGAAGTGCGATaGGCCTGTGACAAGACACTC +
Preference number: 5 (lower is better)
Translates to: KMRTWPLLWAQEGTKVRRALEVR*ACDKTL
Trigger: GAGTGTCTTGTCACAGGCCAATCGCACTTCAAGAGC...CCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp GGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCCCCGGGAACAGGTACTaGAGTCCATCGAAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: GSGFLDSQVIAWVSVGIRPGNRY*SPSKVR
Trigger: CCTCACCTTCGATGGACTCAAGTACCTGTTCCCGGG...GCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAAACCAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp TCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGAACCCAGAACACAGTTaGTGGAAGAAGGAGTTGCCC +
Preference number: 5 (lower is better)
Translates to: SGGPREGSGFLDSQVIAWNPEHS*WKKELP
Trigger: GGGCAACTCCTTCTTCCACAAACTGTGTTCTGGGTT...CCATGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp AGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCTTGGCTGTGATGTCTTaGCAATCAGGCTCCTCACAT +
Preference number: 5 (lower is better)
Translates to: RRAQRSGGPREGSGFLDSLAVMS*QSGSSH
Trigger: ATGTGAGGAGCCTGATTGCAAAGACATCACAGCCAA...GCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 90 bp CAGATCCCACTGAAGGTGAAGTACCTGTTGTCGAAGCTCTTGAAGTaGGATTGGCCTGTGACAAGACACTCCCCTGGGCATTCCTCATTG +
Preference number: 5 (lower is better)
Translates to: QIPLKVKYLLSKLLK*DWPVTRHSPGHSSL
Trigger: CAATGAGGAATGCCCAGGGGAGTGTCTTGTCACAGGCCAATCGCACTTCAAGAGCTTCGACAACAGGTACTTCACCTTCAGTGGGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 90 bp AGTTGCCATTGCCATCGATTCTGGCCGCAAAGCCAAAGGTCTCACTaGAGAGCTTATAGTACCCAGCCTCGCGTTCTAGGTAGAGTCCTT +
Preference number: 5 (lower is better)
Translates to: SCHCHRFWPQSQRSH*RAYSTQPRVLGRVL
Trigger: AAGGACTCTACCTAGAACGCGAGGCTGGGTACTATAAGCTCTCCAGTGAGACCTTTGGCTTTGCGGCCAGAATCGATGGCAATGGCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CCA 90 bp CACAGCCCACAGGTCTTGTTGAAGTGTCTGTCTGACATCAGGACTTaGAAGTTGCCATTGCCATCGATTCTGGCCGCAAAGCCAAAGGTC +
Preference number: 5 (lower is better)
Translates to: HSPQVLLKCLSDIRT*KLPLPSILAAKPKV
Trigger: GACCTTTGGCTTTGCGGCCAGAATCGATGGCAATGGCAACTTCCAAGTCCTGATGTCAGACAGACACTTCAACAAGACCTGTGGGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp TCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGGTCAGGGCGGTCAATTTaGCCAAAGATCTGGAACAGT +
Preference number: 5 (lower is better)
Translates to: SGGPREGSGFLDSQVIAWSGRSI*PKIWNS
Trigger: ACTGTTCCAGATCTTTGGCAAAATTGACCGCCCTGA...CCATGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp AGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCACAGCTACCAGTAAGCTaGAAATTCTGCCCATCGAAG +
Preference number: 5 (lower is better)
Translates to: RSGGPREGSGFLDSQVIAQLPVS*KFCPSK
Trigger: CTTCGATGGGCAGAATTTCAAGCTTACTGGTAGCTG...TGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CAA 90 bp AGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATGCAGTTGGAACTCGTaGTTTTGTGGCGTGTATGTG +
Preference number: 5 (lower is better)
Translates to: RSGGPREGSGFLDSQVIACSWNS*FCGVYV
Trigger: CACATACACGCCACAAAACAACGAGTTCCAACTGCA...TGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CAA 90 bp CTGCAAGCACACTCGTATTCATCACAGCACTGGGTCTTCCGGAGAGTGGGTGTCTGCAGTTGGAACTCGTaGTTTTGTGGCGTGTATGTG +
Preference number: 5 (lower is better)
Translates to: LQAHSYSSQHWVFRRVGVCSWNS*FCGVYV
Trigger: CACATACACGCCACAAAACAACGAGTTCCAACTGCA...GACACCCACTCTCCGGAAGACCCAGTGCTGTGATGAATACGAGTGTGCTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS-3UTR CAA 90 bp GTTAAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGCTGGTGGCAACTGTCTaGCTGGCAGATGGTATGGAA +
Preference number: 5 (lower is better)
Translates to: VKMRTWPLLWAQEGTKVRLVATV*LADGME
Trigger: TTCCATACCATCTGCCAGCAAGACAGTTGCCACCAG...CCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp AAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGCCTTCAGCCAGACACTaGTGTTCATCAAATGGTGGG +
Preference number: 5 (lower is better)
Translates to: KMRTWPLLWAQEGTKVRRPSARH*CSSNGG
Trigger: CCCACCATTTGATGAACACAAGTGTCTGGCTGAAGG...CCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp AGGAGGGCACAAAGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCTTACAATCTCCCACTTaGATGTACTGCACCTTGGCT +
Preference number: 5 (lower is better)
Translates to: RRAQRSGGPREGSGFLDSLQSPT*MYCTLA
Trigger: AGCCAAGGTGCAGTACATCAAAGTGGGAGATTGTAA...GCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCTTTGTGCCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS TCA 90 bp TGTCAGGCAACAGGCTCCCCAGGGTGCCACTTGTGGTACAGTGCATaGAGCCATCTTCACAGTAACACATGGTATGGTGGTCTGAGAAAA +
Preference number: 5 (lower is better)
Translates to: CQATGSPGCHLWYSA*SHLHSNTWYGGLRK
Trigger: TTTTCTCAGACCACCATACCATGTGTTACTGTGAAGATGGCTTCATGCACTGTACCACAAGTGGCACCCTGGGGAGCCTGTTGCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 90 bp CCGCAAAGACCATGCATCTTCGAAGCAAAGGTCTTGGGGCTAAGCTaGAGTTGGAACTCGTTGTTTTGTGGCGTGTATGTGAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: PQRPCIFEAKVLGLS*SWNSLFCGVYVRMW
Trigger: CCACATCCTCACATACACGCCACAAAACAACGAGTTCCAACTGCAGCTTAGCCCCAAGACCTTTGCTTCGAAGATGCATGGTCTTTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 90 bp GTCTGTCTGACATCAGGACTTGGAAGTTGCCATTGCCATCGATTCTaGCCGCAAAGCCAAAGGTCTCACTGGAGAGCTTATAGTACCCAG +
Preference number: 5 (lower is better)
Translates to: VCLTSGLGSCHCHRF*PQSQRSHWRAYSTQ
Trigger: CTGGGTACTATAAGCTCTCCAGTGAGACCTTTGGCTTTGCGGCCAGAATCGATGGCAATGGCAACTTCCAAGTCCTGATGTCAGACAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CCA 90 bp CCATCTTCATCCACACAAACTCCAGAAAACCCAGAACACAGTTTGTaGAAGAAGGAGTTGCCCAGGGTGGCCATGGTGGAGAGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: PSSSTQTPENPEHSL*KKELPRVAMVERSS
Trigger: TGAAGACCTCTCCACCATGGCCACCCTGGGCAACTCCTTCTTCCACAAACTGTGTTCTGGGTTTTCTGGAGTTTGTGTGGATGAAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp AAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGAGGTCCTCCACGAACTCCTaGCTCTTATTGAAGTTGGCT +
Preference number: 5 (lower is better)
Translates to: KMRTWPLLWAQEGTKVRRSSTNS*LLLKLA
Trigger: AGCCAACTTCAATAAGAGCAAGGAGTTCGTGGAGGA...CCTCCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp GTTAAGATGAGAACTTGGCCTTTATTGTGGGCCCAGGAGGGCACAAAGGTCAGGGCCTTCCAGAAAAACTaGGTGTTGGGGACAGAAGCA +
Preference number: 5 (lower is better)
Translates to: VKMRTWPLLWAQEGTKVRAFQKN*VLGTEA
Trigger: TGCTTCTGTCCCCAACACCAAGTTTTTCTGGAAGGC...CCTGACCTTTGTGCCCTCCTGGGCCCACAATAAAGGCCAAGTTCTCATCTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp AGGTCAGGAGGCCCAAGGGAGGGATCTGGTTTTCTGGATAGCCAGGTCATAGCATTGATGTACTGCACCTaGGCTGTGATGTCTTTGCAA +
Preference number: 5 (lower is better)
Translates to: RSGGPREGSGFLDSQVIALMYCT*AVMSLQ
Trigger: TTGCAAAGACATCACAGCCAAGGTGCAGTACATCAA...TGCTATGACCTGGCTATCCAGAAAACCAGATCCCTCCCTTGGGCCTCCTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 90 bp AGCAAAGGTCTTGGGGCTAAGCTGCAGTTGGAACTCGTTGTTTTGTaGCGTGTATGTGAGGATGTGGCCAAGATGGGTAAACCTGACTTC +
Preference number: 5 (lower is better)
Translates to: SKGLGAKLQLELVVL*RVCEDVAKMGKPDF
Trigger: GAAGTCAGGTTTACCCATCTTGGCCACATCCTCACATACACGCCACAAAACAACGAGTTCCAACTGCAGCTTAGCCCCAAGACCTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 90 bp AGACCATGCATCTTCGAAGCAAAGGTCTTGGGGCTAAGCTGCAGTTaGAACTCGTTGTTTTGTGGCGTGTATGTGAGGATGTGGCCAAGA +
Preference number: 5 (lower is better)
Translates to: RPCIFEAKVLGLSCS*NSLFCGVYVRMWPR
Trigger: TCTTGGCCACATCCTCACATACACGCCACAAAACAACGAGTTCCAACTGCAGCTTAGCCCCAAGACCTTTGCTTCGAAGATGCATGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS-3UTR CAA 90 bp CTCTTGACTTTCCAAAGAAGTTCTCTTCTCTTTGCTTGGTCAGCCCTGCCCTTCGACAGGCTCATTCTCTaGCCATCTTGGAAGTTCCCG +
Preference number: 5 (lower is better)
Translates to: LLTFQRSSLLFAWSALPFDRLIL*PSWKFP
Trigger: CGGGAACTTCCAAGATGGCAAGAGAATGAGCCTGTC...GAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTTGGAAAGTCAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CAA 90 bp TTGTTCCTCTTCCCAGTGTTGAATAAATCTCCACCCTCCGCCCTTCACTGTTGTGACAGGCTCATTCTCTaGCCATCTTGGAAGTTCCCG +
Preference number: 5 (lower is better)
Translates to: LFLFPVLNKSPPSALHCCDRLIL*PSWKFP
Trigger: CGGGAACTTCCAAGATGGCAAGAGAATGAGCCTGTC...ACAACAGTGAAGGGCGGAGGGTGGAGATTTATTCAACACTGGGAAGAGGAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CAA 90 bp CTTTCCAAAGAAGTTCTCTTCTCTTTGCTTGGTCAGCCCTGCCCTTCAGGTCTCAGCCCACAGGTCTTGTaGAAGTGTCTGTCTGACATC +
Preference number: 5 (lower is better)
Translates to: LSKEVLFSLLGQPCPSGLSPQVL*KCLSDI
Trigger: GATGTCAGACAGACACTTCAACAAGACCTGTGGGCT...GAGACCTGAAGGGCAGGGCTGACCAAGCAAAGAGAAGAGAACTTCTTTGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS TCA 90 bp ACAGTGCATGAAGCCATCTTCACAGTAACACATGGTATGGTGGTCTaGGAAAATGTCCGCAGGCTGGAAGAGCTCACCATCGTAGTAGCA +
Preference number: 5 (lower is better)
Translates to: TVHEAIFTVTHGMVV*ENVRRLEELTIVVA
Trigger: TGCTACTACGATGGTGAGCTCTTCCAGCCTGCGGACATTTTCTCAGACCACCATACCATGTGTTACTGTGAAGATGGCTTCATGCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp TTTCTGGATAGCCAGGTCATAGCATGGGTATCAGTAGGAATCCGCTGTAGCTGCAATGTCCACTTCCTCTaGGGACTTACAATCTCCCAC +
Preference number: 5 (lower is better)
Translates to: FLDSQVIAWVSVGIRCSCNVHFL*GLTISH
Trigger: GTGGGAGATTGTAAGTCCCAAGAGGAAGTGGACATT...GCAGCTACAGCGGATTCCTACTGATACCCATGCTATGACCTGGCTATCCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS-3UTR CAA 90 bp CGCCCTTCACTGTTGTTCTGTTTAACTAGTGTATTGGGGCTACAGAAACTTAGTAGCCCACAGGTCTTGTaGAAGTGTCTGTCTGACATC +
Preference number: 5 (lower is better)
Translates to: RPSLLFCLTSVLGLQKLSSPQVL*KCLSDI
Trigger: GATGTCAGACAGACACTTCAACAAGACCTGTGGGCT...ACTAAGTTTCTGTAGCCCCAATACACTAGTTAAACAGAACAACAGTGAAGGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CAA 90 bp CGCCCTTCACTGTTGTTCTGTTTAACTAGTGTATTGGGGCTACAGAAACTTAGTTGCGTTACGGTGCCATaGGCAAACAAATGGATGTCA +
Preference number: 5 (lower is better)
Translates to: RPSLLFCLTSVLGLQKLSCVTVP*ANKWMS
Trigger: TGACATCCATTTGTTTGCCAATGGCACCGTAACGCA...ACTAAGTTTCTGTAGCCCCAATACACTAGTTAAACAGAACAACAGTGAAGGGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS-3UTR CAA 90 bp AATTCAGGTTATACTCTCACTCCAAGCCAAAAGGCTTATGGAAACCTTCCTCTTTGCGTTACGGTGCCATaGGCAAACAAATGGATGTCA +
Preference number: 5 (lower is better)
Translates to: NSGYTLTPSQKAYGNLPLCVTVP*ANKWMS
Trigger: TGACATCCATTTGTTTGCCAATGGCACCGTAACGCA...AAGAGGAAGGTTTCCATAAGCCTTTTGGCTTGGAGTGAGAGTATAACCTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS TCA 72 bp CCTGGACTCACGGTGACGTGGGCTACCTGTGGAGGCTaGGTTGGGGCTGGGGCCTCGGGAGCAAGGTCACAG +
Preference number: 6 (lower is better)
Translates to: PGLTVTWATCGG*VGAGASGARSQ
Trigger: CTGTGACCTTGCTCCCGAGGCCCCAGCCCCAACTCAGCCTCCACAGGTAGCCCACGTCACCGTGAGTCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS TCA 72 bp CCGGTGACGAGATCCCAGCGATCCCTGGACTCACGGTaGCGTGGGCTACCTGTGGAGGCTGAGTTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: PVTRSQRSLDSR*RGLPVEAELGL
Trigger: CAGCCCCAACTCAGCCTCCACAGGTAGCCCACGTCACCGTGAGTCCAGGGATCGCTGGGATCTCGTCACCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 72 bp GAGAGGGAGGTGCCAGGAGGGTACCGCTTCCCAGCGTaGACGCAAGGACAGTCGGAGCTCTGCACACATCGG +
Preference number: 6 (lower is better)
Translates to: EREVPGGYRFPA*TQGQSELCTHR
Trigger: CCGATGTGTGCAGAGCTCCGACTGTCCTTGCGTGCACGCTGGGAAGCGGTACCCTCCTGGCACCTCCCTCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CAA 72 bp GGCAGAGGGCTGACTGCGTGGTGGCAGGCCTCGAACTaGGAGGACGTCAGGAGCGCACAAGCCTCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: GRGLTAWWQASN*EDVRSAQASSA
Trigger: TGCAGAGGAGGCTTGTGCGCTCCTGACGTCCTCCAAGTTCGAGGCCTGCCACCACGCAGTCAGCCCTCTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS TCA 72 bp TCACCAGGCTGTTGTGCAGGGCAGAGAGCCGCACACTaGCCGAGCGGGTGCAGACAGCATCAGGGTCATCGG +
Preference number: 6 (lower is better)
Translates to: SPGCCAGQRAAH*PSGCRQHQGHR
Trigger: CCGATGACCCTGATGCTGTCTGCACCCGCTCGGTCAGTGTGCGGCTCTCTGCCCTGCACAACAGCCTGGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS TCA 72 bp ATGCTGAGGTGGTGGTCCCAGACCACAGAAAGGGCCTaGCCCAGCAGCAGGATGACGTACCGGCCCGACTCC +
Preference number: 6 (lower is better)
Translates to: MLRWWSQTTERA*PSSRMTYRPDS
Trigger: GGAGTCGGGCCGGTACGTCATCCTGCTGCTGGGTCAGGCCCTTTCTGTGGTCTGGGACCACCACCTCAGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 72 bp ACTGCTCCCCCGTGCTTCAGTTTCACCAGGCTGTTGTaGAGGGCAGAGAGCCGCACACTGACCGAGCGGGTG +
Preference number: 6 (lower is better)
Translates to: TAPPCFSFTRLL*RAESRTLTERV
Trigger: CACCCGCTCGGTCAGTGTGCGGCTCTCTGCCCTGCACAACAGCCTGGTGAAACTGAAGCACGGGGGAGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 72 bp AGGACCTGGCAGTGGGAGCTGTCAGAGACGGGACACTaGTCCTCGGGAACAGCCTGGCATGTGTACCCTGGC +
Preference number: 6 (lower is better)
Translates to: RTWQWELSETGH*SSGTAWHVYPG
Trigger: GCCAGGGTACACATGCCAGGCTGTTCCCGAGGAGCAGTGTCCCGTCTCTGACAGCTCCCACTGCCAGGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 72 bp CGGCCTGTCACGGGGCTTTTCTGTGCAGAGGGTCCCTaGCCAGGTGAGGGCCAGAACAAGCAGGCAGATCTC +
Preference number: 6 (lower is better)
Translates to: RPVTGLFCAEGP*PGEGQNKQADL
Trigger: GAGATCTGCCTGCTTGTTCTGGCCCTCACCTGGCCAGGGACCCTCTGCACAGAAAAGCCCCGTGACAGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CCA 72 bp CAGGTTTGTGCTCTGCTTGAGGCGAGCCACTTCACATaGGCCACACGTGGGAGCTCGGGCTGTGGGACACGG +
Preference number: 6 (lower is better)
Translates to: QVCALLEASHFT*ATRGSSGCGTR
Trigger: CCGTGTCCCACAGCCCGAGCTCCCACGTGTGGCCCATGTGAAGTGGCTCGCCTCAAGCAGAGCACAAACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS TCA 72 bp CGGAGGTCACCTTGCAGGAAGGGGAGCTGGACATCCTaGCCATCGATGCCCACTGCTCCCCCGTGCTTCAGT +
Preference number: 6 (lower is better)
Translates to: RRSPCRKGSWTS*PSMPTAPPCFS
Trigger: ACTGAAGCACGGGGGAGCAGTGGGCATCGATGGTCAGGATGTCCAGCTCCCCTTCCTGCAAGGTGACCTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS TCA 72 bp CCCAGACCACAGAAAGGGCCTGACCCAGCAGCAGGATaGCGTACCGGCCCGACTCCACCACCTCAAAGTGAG +
Preference number: 6 (lower is better)
Translates to: PRPQKGPDPAAG*RTGPTPPPQSE
Trigger: CTCACTTTGAGGTGGTGGAGTCGGGCCGGTACGTCATCCTGCTGCTGGGTCAGGCCCTTTCTGTGGTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 72 bp CCTCCTCTGCAAACCTGGTCAAGCGTGGATTCAGGCTaGAGGGGTCGCTGTGTTGCCTGCGCAGGTCCGAAC +
Preference number: 6 (lower is better)
Translates to: PPLQTWSSVDSG*RGRCVACAGPN
Trigger: GTTCGGACCTGCGCAGGCAACACAGCGACCCCTGCAGCCTGAATCCACGCTTGACCAGGTTTGCAGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 72 bp AGGGAGCGGCAGGTCAGGTTGCAGGAATTCCCACACTaGAGGTACACCTGGCCCTGTGGACAGCCCAGAGCA +
Preference number: 6 (lower is better)
Translates to: RERQVRLQEFPH*RYTWPCGQPRA
Trigger: TGCTCTGGGCTGTCCACAGGGCCAGGTGTACCTGCAGTGTGGGAATTCCTGCAACCTGACCTGCCGCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 72 bp TCCATGCCAGCTGGGCAAGCTGGACGACAGGCACTGTaGTCAGTCCAGCCGTACAGCACCATCCCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: SMPAGQAGRQAL*SVQPYSTIPSW
Trigger: CCAGGAAGGGATGGTGCTGTACGGCTGGACTGACCACAGTGCCTGTCGTCCAGCTTGCCCAGCTGGCATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CCA 72 bp CAAGGCCACACACTTGTTTTCGTGCCGGACCATGCCTaGGGGACAGAGGCAGCCAGACACACAGCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: QGHTLVFVPDHA*GTEAARHTAQA
Trigger: AGCCTGGGCTGTGTGTCTGGCTGCCTCTGTCCCCCAGGCATGGTCCGGCACGAAAACAAGTGTGTGGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 72 bp CTGTCAGAGACGGGACACTGCTCCTCGGGAACAGCCTaGCATGTGTACCCTGGCTGCTGCACCGTCCATTCC +
Preference number: 6 (lower is better)
Translates to: LSETGHCSSGTA*HVYPGCCTVHS
Trigger: GGAATGGACGGTGCAGCAGCCAGGGTACACATGCCAGGCTGTTCCCGAGGAGCAGTGTCCCGTCTCTGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS GCA 72 bp CCCAGAAGAGCTCTCGCAGTTCCTGCTGGGAGGAGATaGCCGTTTACACCGCTGTTCCTCACTGCTCAGGGC +
Preference number: 6 (lower is better)
Translates to: PRRALAVPAGRR*PFTPLFLTAQG
Trigger: GCCCTGAGCAGTGAGGAACAGCGGTGTAAACGGGCATCTCCTCCCAGCAGGAACTGCGAGAGCTCTTCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS GCA 72 bp CTTGCAGGAAGGGGAGCTGGACATCCTGACCATCGATaGCCACTGCTCCCCCGTGCTTCAGTTTCACCAGGC +
Preference number: 6 (lower is better)
Translates to: LAGRGAGHPDHR*PLLPRASVSPG
Trigger: GCCTGGTGAAACTGAAGCACGGGGGAGCAGTGGGCATCGATGGTCAGGATGTCCAGCTCCCCTTCCTGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 72 bp CACAGAGCCACAAAGGACTCGGGATCCACCAGAGGGTaGCAGCGGGCAAACACCGATGCCGTCTTCAGTAGC +
Preference number: 6 (lower is better)
Translates to: HRATKDSGSTRG*QRANTDAVFSS
Trigger: GCTACTGAAGACGGCATCGGTGTTTGCCCGCTGCCACCCTCTGGTGGATCCCGAGTCCTTTGTGGCTCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CCA 72 bp AGGACGTCAGGAGCGCACAAGCCTCCTCTGCAAACCTaGTCAAGCGTGGATTCAGGCTGCAGGGGTCGCTGT +
Preference number: 6 (lower is better)
Translates to: RTSGAHKPPLQT*SSVDSGCRGRC
Trigger: ACAGCGACCCCTGCAGCCTGAATCCACGCTTGACCAGGTTTGCAGAGGAGGCTTGTGCGCTCCTGACGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 72 bp GTCAGGTTGCAGGAATTCCCACACTGCAGGTACACCTaGCCCTGTGGACAGCCCAGAGCACAGAAGCCAGGC +
Preference number: 6 (lower is better)
Translates to: VRLQEFPHCRYT*PCGQPRAQKPG
Trigger: GCCTGGCTTCTGTGCTCTGGGCTGTCCACAGGGCCAGGTGTACCTGCAGTGTGGGAATTCCTGCAACCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 72 bp CTGGCACGTCTTAGCACACTCCAGCCCTTGAGCCCGTaGGTTGTCAGCAGGACACACCAGCTTGACCATGGG +
Preference number: 6 (lower is better)
Translates to: LARLSTLQPLSP*VVSRTHQLDHG
Trigger: CCCATGGTCAAGCTGGTGTGTCCTGCTGACAACCCACGGGCTCAAGGGCTGGAGTGTGCTAAGACGTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CAA 72 bp GGTCAAGCGTGGATTCAGGCTGCAGGGGTCGCTGTGTaGCCTGCGCAGGTCCGAACAGTCCCCTTGAAGCTT +
Preference number: 6 (lower is better)
Translates to: GQAWIQAAGVAV*PAQVRTVPLKL
Trigger: AAGCTTCAAGGGGACTGTTCGGACCTGCGCAGGCAACACAGCGACCCCTGCAGCCTGAATCCACGCTTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CAA 72 bp CGATCCCCAACCCCAACGGGAAACACTGCCACTCGGTaGGATCTGGCAGCATCTGCTGCTGTGTCCACGGGA +
Preference number: 6 (lower is better)
Translates to: RSPTPTGNTATR*DLAASAAVSTG
Trigger: TCCCGTGGACACAGCAGCAGATGCTGCCAGATCCAACCGAGTGGCAGTGTTTCCCGTTGGGGTTGGGGATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS TCA 72 bp GGCCATCCCAGTCCATCTGCAGGTCCTCCGCATAGCTaGGGCGTACAGAAGCCATCACTGTGTGCTGGATGC +
Preference number: 6 (lower is better)
Translates to: GHPSPSAGPPHS*GVQKPSLCAGC
Trigger: GCATCCAGCACACAGTGATGGCTTCTGTACGCCTCAGCTATGCGGAGGACCTGCAGATGGACTGGGATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 72 bp GAAGGGGAGCTGGACATCCTGACCATCGATGCCCACTaGTCCCCCGTGCTTCAGTTTCACCAGGCTGTTGTG +
Preference number: 6 (lower is better)
Translates to: EGELDILTIDAH*SPVLQFHQAVV
Trigger: CACAACAGCCTGGTGAAACTGAAGCACGGGGGAGCAGTGGGCATCGATGGTCAGGATGTCCAGCTCCCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 72 bp GCTCCCCTCCATCCACCAGGATGGTCACCCGCTTCCTaGACTTCACCGAGGGATAGCTGCAACCCTCATTTC +
Preference number: 6 (lower is better)
Translates to: APLHPPGWSPAS*TSPRDSCNPHF
Trigger: GAAATGAGGGTTGCAGCTATCCCTCGGTGAAGTGCAGGAAGCGGGTGACCATCCTGGTGGATGGAGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 72 bp CCTTGGCTGGGAGAGAAGCTGTGCTCAGAAAGGTACTaGAGGGCCTGCCCAGTGTTTGTCCTATTGCCGCCC +
Preference number: 6 (lower is better)
Translates to: PWLGEKLCSERY*RACPVFVLLPP
Trigger: GGGCGGCAATAGGACAAACACTGGGCAGGCCCTGCAGTACCTTTCTGAGCACAGCTTCTCTCCCAGCCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 72 bp TTGCCCAGGGTGGCCATGGTGGAGAGGTCTTCAACTTaGTGGAGCTTTACCACATTGGAGCTGGCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: LPRVAMVERSST*WSFTTLELAPG
Trigger: CCCTGGGGCCAGCTCCAATGTGGTAAAGCTCCAGCAAGTTGAAGACCTCTCCACCATGGCCACCCTGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 72 bp TGCTCCTCGGGAACAGCCTGGCATGTGTACCCTGGCTaGTGCACCGTCCATTCCTGGACAAGCCTTTTCCAG +
Preference number: 6 (lower is better)
Translates to: CSSGTAWHVYPG*CTVHSWTSLFQ
Trigger: CTGGAAAAGGCTTGTCCAGGAATGGACGGTGCAGCAGCCAGGGTACACATGCCAGGCTGTTCCCGAGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS GCA 72 bp GGATGGTCCCCACAGAAGCTAGTGTTCCCATCGCAGTaGCGAGGGCAGCCACGCTCACAGTGGTTATACACC +
Preference number: 6 (lower is better)
Translates to: GWSPQKLVFPSQ*RGQPRSQWLYT
Trigger: GGTGTATAACCACTGTGAGCGTGGCTGCCCTCGGCACTGCGATGGGAACACTAGCTTCTGTGGGGACCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 72 bp CTGTGGTCAGTCCAGCCGTACAGCACCATCCCTTCCTaGGCGCAGGTTCGGGCATACTCAAGGAGTACAGGA +
Preference number: 6 (lower is better)
Translates to: LWSVQPYSTIPS*AQVRAYSRSTG
Trigger: TCCTGTACTCCTTGAGTATGCCCGAACCTGCGCCCAGGAAGGGATGGTGCTGTACGGCTGGACTGACCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CCA 72 bp CAACCCCAACGGGAAACACTGCCACTCGGTTGGATCTaGCAGCATCTGCTGCTGTGTCCACGGGATCCAAGG +
Preference number: 6 (lower is better)
Translates to: QPQRETLPLGWI*QHLLLCPRDPR
Trigger: CCTTGGATCCCGTGGACACAGCAGCAGATGCTGCCAGATCCAACCGAGTGGCAGTGTTTCCCGTTGGGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 72 bp GATCCCCAACCCCAACGGGAAACACTGCCACTCGGTTaGATCTGGCAGCATCTGCTGCTGTGTCCACGGGAT +
Preference number: 6 (lower is better)
Translates to: DPQPQRETLPLG*IWQHLLLCPRD
Trigger: ATCCCGTGGACACAGCAGCAGATGCTGCCAGATCCAACCGAGTGGCAGTGTTTCCCGTTGGGGTTGGGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 72 bp TTCCCATCGCAGTGCCGAGGGCAGCCACGCTCACAGTaGTTATACACCAGGGACGGTGGGCATGACATAGCA +
Preference number: 6 (lower is better)
Translates to: FPSQCRGQPRSQ*LYTRDGGHDIA
Trigger: TGCTATGTCATGCCCACCGTCCCTGGTGTATAACCACTGTGAGCGTGGCTGCCCTCGGCACTGCGATGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 72 bp TTCCCATCGCAGTGCCGAGGGCAGCCACGCTCACAGTaGTTATACACCAGGGACGGTGGGCATGACATAGCT +
Preference number: 6 (lower is better)
Translates to: FPSQCRGQPRSQ*LYTRDGGHDIA
Trigger: AGCTATGTCATGCCCACCGTCCCTGGTGTATAACCACTGTGAGCGTGGCTGCCCTCGGCACTGCGATGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS CAA 90 bp ACACTCCAGGTCGTAGTTCTGGCACGTCTTAGCACACTCCAGCCCTaGAGCCCGTGGGTTGTCAGCAGGACACACCAGCTTGACCATGGG +
Preference number: 6 (lower is better)
Translates to: TLQVVVLARLSTLQP*SPWVVSRTHQLDHG
Trigger: CCCATGGTCAAGCTGGTGTGTCCTGCTGACAACCCACGGGCTCAAGGGCTGGAGTGTGCTAAGACGTGCCAGAACTACGACCTGGAGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CAA 90 bp TCACACACACACTCATACTCTGGGCAGCACAGGTTTGTGCTCTGCTaGAGGCGAGCCACTTCACATGGGCCACACGTGGGAGCTCGGGCT +
Preference number: 6 (lower is better)
Translates to: SHTHSYSGQHRFVLC*RRATSHGPHVGARA
Trigger: AGCCCGAGCTCCCACGTGTGGCCCATGTGAAGTGGCTCGCCTCAAGCAGAGCACAAACCTGTGCTGCCCAGAGTATGAGTGTGTGTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS TCA 72 bp TGGAGCGATGACCTTGTGGCATTCAGCAAACGACGCTaGGAGGAGGACCTGGCAGTGGGAGCTGTCAGAGAC +
Preference number: 6 (lower is better)
Translates to: WSDDLVAFSKRR*EEDLAVGAVRD
Trigger: GTCTCTGACAGCTCCCACTGCCAGGTCCTCCTCTCAGCGTCGTTTGCTGAATGCCACAAGGTCATCGCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS TCA 72 bp ACTCATACTCTGGGCAGCACAGGTTTGTGCTCTGCTTaGGGCGAGCCACTTCACATGGGCCACACGTGGGAG +
Preference number: 6 (lower is better)
Translates to: THTLGSTGLCSA*GEPLHMGHTWE
Trigger: CTCCCACGTGTGGCCCATGTGAAGTGGCTCGCCTCAAGCAGAGCACAAACCTGTGCTGCCCAGAGTATGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS GCA 72 bp CCTGATGCATGTCCCCAGAAGAGCTCTCGCAGTTCCTaGTGGGAGGAGATGCCCGTTTACACCGCTGTTCCT +
Preference number: 6 (lower is better)
Translates to: PDACPQKSSRSS*WEEMPVYTAVP
Trigger: AGGAACAGCGGTGTAAACGGGCATCTCCTCCCAGCAGGAACTGCGAGAGCTCTTCTGGGGACATGCATCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS GCA 72 bp CAATGGCAGAGCAAGTGGCGTCACACACATGGTTCGTaGAGTTCCACTTCCGCTCCCGGCAGACACAGGTGT +
Preference number: 6 (lower is better)
Translates to: QWQSKWRHTHGS*SSTSAPGRHRC
Trigger: ACACCTGTGTCTGCCGGGAGCGGAAGTGGAACTGCACGAACCATGTGTGTGACGCCACTTGCTCTGCCATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 72 bp TTCCCGCAGAGGCCACACACCTGTTCCTGGTATGTGTaGTTCAGGACCACAGAGATGCTGAGGTGGTGGTCC +
Preference number: 6 (lower is better)
Translates to: FPQRPHTCSWYV*FRTTEMLRWWS
Trigger: GGACCACCACCTCAGCATCTCTGTGGTCCTGAAGCACACATACCAGGAACAGGTGTGTGGCCTCTGCGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 72 bp TCCTCGGGAACAGCCTGGCATGTGTACCCTGGCTGCTaGACCGTCCATTCCTGGACAAGCCTTTTCCAGTCT +
Preference number: 6 (lower is better)
Translates to: SSGTAWHVYPGC*TVHSWTSLFQS
Trigger: AGACTGGAAAAGGCTTGTCCAGGAATGGACGGTGCAGCAGCCAGGGTACACATGCCAGGCTGTTCCCGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS GCA 72 bp ACTGATGTCGAACTCCATCCTCGCCAACACACTGAGTaGAGGCCTCCTCGGGGACACAGCTGCCTTCCAGAA +
Preference number: 6 (lower is better)
Translates to: TDVELHPRQHTE*RPPRGHSCLPE
Trigger: TTCTGGAAGGCAGCTGTGTCCCCGAGGAGGCCTGCACTCAGTGTGTTGGCGAGGATGGAGTTCGACATCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 72 bp GATGCATGTCCCCAGAAGAGCTCTCGCAGTTCCTGCTaGGAGGAGATGCCCGTTTACACCGCTGTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: DACPQKSSRSSC*EEMPVYTAVPH
Trigger: GTGAGGAACAGCGGTGTAAACGGGCATCTCCTCCCAGCAGGAACTGCGAGAGCTCTTCTGGGGACATGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CCA 72 bp CCGATGCCGTCTTCAGTAGCTGGCATTGCTCCCACATaGCCTGATGCATGTCCCCAGAAGAGCTCTCGCAGT +
Preference number: 6 (lower is better)
Translates to: PMPSSVAGIAPT*PDACPQKSSRS
Trigger: ACTGCGAGAGCTCTTCTGGGGACATGCATCAGGCCATGTGGGAGCAATGCCAGCTACTGAAGACGGCATCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CCA 72 bp TGGGTTGTCAGCAGGACACACCAGCTTGACCATGGGTaGCCGGCAGGAAAGGCTCCTTTTGCTACGGTGAGA +
Preference number: 6 (lower is better)
Translates to: WVVSRTHQLDHG*PAGKAPFATVR
Trigger: TCTCACCGTAGCAAAAGGAGCCTTTCCTGCCGGCCACCCATGGTCAAGCTGGTGTGTCCTGCTGACAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 72 bp GCCATACCAATGGCAGAGCAAGTGGCGTCACACACATaGTTCGTGCAGTTCCACTTCCGCTCCCGGCAGACA +
Preference number: 6 (lower is better)
Translates to: AIPMAEQVASHT*FVQFHFRSRQT
Trigger: TGTCTGCCGGGAGCGGAAGTGGAACTGCACGAACCATGTGTGTGACGCCACTTGCTCTGCCATTGGTATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 72 bp TGGCATGTGTACCCTGGCTGCTGCACCGTCCATTCCTaGACAAGCCTTTTCCAGTCTGTGGTGACCGTGCCA +
Preference number: 6 (lower is better)
Translates to: WHVYPGCCTVHS*TSLFQSVVTVP
Trigger: TGGCACGGTCACCACAGACTGGAAAAGGCTTGTCCAGGAATGGACGGTGCAGCAGCCAGGGTACACATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 72 bp ACACTGCTCCTCGGGAACAGCCTGGCATGTGTACCCTaGCTGCTGCACCGTCCATTCCTGGACAAGCCTTTT +
Preference number: 6 (lower is better)
Translates to: TLLLGNSLACVP*LLHRPFLDKPF
Trigger: AAAAGGCTTGTCCAGGAATGGACGGTGCAGCAGCCAGGGTACACATGCCAGGCTGTTCCCGAGGAGCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 72 bp CAGGGTTGGCTGGAGCCCTCCTTCACACGGAGGCACTaGAGGCAAGTTGCAGTTGAACAGGTCACACACACA +
Preference number: 6 (lower is better)
Translates to: QGWLEPSFTRRH*RQVAVEQVTHT
Trigger: TGTGTGTGTGACCTGTTCAACTGCAACTTGCCTCCAGTGCCTCCGTGTGAAGGAGGGCTCCAGCCAACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CAA 72 bp GTCGTAGTTCTGGCACGTCTTAGCACACTCCAGCCCTaGAGCCCGTGGGTTGTCAGCAGGACACACCAGCTT +
Preference number: 6 (lower is better)
Translates to: VVVLARLSTLQP*SPWVVSRTHQL
Trigger: AAGCTGGTGTGTCCTGCTGACAACCCACGGGCTCAAGGGCTGGAGTGTGCTAAGACGTGCCAGAACTACGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CAA 90 bp CTGTCTTGCTGGCAGATGGTATGGAATGTGGCTGGAGCGATGACCTaGTGGCATTCAGCAAACGACGCTGAGAGGAGGACCTGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: LSCWQMVWNVAGAMT*WHSANDAERRTWQW
Trigger: CCACTGCCAGGTCCTCCTCTCAGCGTCGTTTGCTGAATGCCACAAGGTCATCGCTCCAGCCACATTCCATACCATCTGCCAGCAAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS TCA 72 bp GTTCCTGGTATGTGTGCTTCAGGACCACAGAGATGCTaGGGTGGTGGTCCCAGACCACAGAAAGGGCCTGAC +
Preference number: 6 (lower is better)
Translates to: VPGMCASGPQRC*GGGPRPQKGPD
Trigger: GTCAGGCCCTTTCTGTGGTCTGGGACCACCACCTCAGCATCTCTGTGGTCCTGAAGCACACATACCAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 72 bp CTAGGTAGAGTCCTTGGGAGGCGTAGGGCATGGAGATaGTTTGGTCACCCTGCGTTACGGTGCCATTGGCAA +
Preference number: 6 (lower is better)
Translates to: LGRVLGRRRAWR*FGHPALRCHWQ
Trigger: TTGCCAATGGCACCGTAACGCAGGGTGACCAAAGCATCTCCATGCCCTACGCCTCCCAAGGACTCTACCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS GCA 72 bp TGGGAGGAGATGCCCGTTTACACCGCTGTTCCTCACTaGTCAGGGCCCAGGAGTTGGCAAAATCATAGGGGT +
Preference number: 6 (lower is better)
Translates to: WEEMPVYTAVPH*SGPRSWQNHRG
Trigger: ACCCCTATGATTTTGCCAACTCCTGGGCCCTGAGCAGTGAGGAACAGCGGTGTAAACGGGCATCTCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS GCA 72 bp GGGAAACACTGCCACTCGGTTGGATCTGGCAGCATCTaGTGCTGTGTCCACGGGATCCAAGGAGGTATCCAT +
Preference number: 6 (lower is better)
Translates to: GKHCHSVGSGSI*CCVHGIQGGIH
Trigger: ATGGATACCTCCTTGGATCCCGTGGACACAGCAGCAGATGCTGCCAGATCCAACCGAGTGGCAGTGTTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 72 bp ACCAACGTACGGGGCAAGGACCAGTCTCCCATCCACTaGCATCTCCATGTTACTGTGCAGCTCAGCAGAGAC +
Preference number: 6 (lower is better)
Translates to: TNVRGKDQSPIH*HLHVTVQLSRD
Trigger: GTCTCTGCTGAGCTGCACAGTAACATGGAGATGGCAGTGGATGGGAGACTGGTCCTTGCCCCGTACGTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS GCA 72 bp ACACACTCATACTCTGGGCAGCACAGGTTTGTGCTCTaGTTGAGGCGAGCCACTTCACATGGGCCACACGTG +
Preference number: 6 (lower is better)
Translates to: THSYSGQHRFVL*LRRATSHGPHV
Trigger: CACGTGTGGCCCATGTGAAGTGGCTCGCCTCAAGCAGAGCACAAACCTGTGCTGCCCAGAGTATGAGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 72 bp CACACACTCCTTATATTCCATGCCAGCTGGGCAAGCTaGACGACAGGCACTGTGGTCAGTCCAGCCGTACAG +
Preference number: 6 (lower is better)
Translates to: HTLLIFHASWAS*TTGTVVSPAVQ
Trigger: CTGTACGGCTGGACTGACCACAGTGCCTGTCGTCCAGCTTGCCCAGCTGGCATGGAATATAAGGAGTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CCA 72 bp ACCTCACACACTCGCTCCTGGTGGCAACTGTCTTGCTaGCAGATGGTATGGAATGTGGCTGGAGCGATGACC +
Preference number: 6 (lower is better)
Translates to: TSHTRSWWQLSC*QMVWNVAGAMT
Trigger: GGTCATCGCTCCAGCCACATTCCATACCATCTGCCAGCAAGACAGTTGCCACCAGGAGCGAGTGTGTGAGGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 72 bp ACTTGGTGTTGGGGACAGAAGCAGCCTTCTGAGGGATaGTCCCCACAGAAGCTAGTGTTCCCATCGCAGTGC +
Preference number: 6 (lower is better)
Translates to: TWCWGQKQPSEG*SPQKLVFPSQC
Trigger: GCACTGCGATGGGAACACTAGCTTCTGTGGGGACCATCCCTCAGAAGGCTGCTTCTGTCCCCAACACCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 72 bp AGCTCACACACTCGCTCCTGGTGGCAACTGTCTTGCTaGCAGATGGTATGGAATGTGGCTGGAGCGATGACC +
Preference number: 6 (lower is better)
Translates to: SSHTRSWWQLSC*QMVWNVAGAMT
Trigger: GGTCATCGCTCCAGCCACATTCCATACCATCTGCCAGCAAGACAGTTGCCACCAGGAGCGAGTGTGTGAGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147101.2
CDS TCA 72 bp CAGCATCAGGGTCATCGGCACACTGCATGGTCTCTATaGCAATGGAGAAAGTGTGATCCTCGCAGTCCCGGG +
Preference number: 6 (lower is better)
Translates to: QHQGHRHTAWSL*QWRKCDPRSPG
Trigger: CCCGGGACTGCGAGGATCACACTTTCTCCATTGTCATAGAGACCATGCAGTGTGCCGATGACCCTGATGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS TCA 72 bp AGGATGACGTACCGGCCCGACTCCACCACCTCAAAGTaGGATTCATCTCTCAGGGGCCTCTTAACGTTCACC +
Preference number: 6 (lower is better)
Translates to: RMTYRPDSTTSK*DSSLRGLLTFT
Trigger: GGTGAACGTTAAGAGGCCCCTGAGAGATGAATCTCACTTTGAGGTGGTGGAGTCGGGCCGGTACGTCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS TCA 72 bp CTCCTTCACACGGAGGCACTGGAGGCAAGTTGCAGTTaGACAGGTCACACACACACTCATACTCTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: LLHTEALEASCS*TGHTHTHTLGS
Trigger: GCTGCCCAGAGTATGAGTGTGTGTGTGACCTGTTCAACTGCAACTTGCCTCCAGTGCCTCCGTGTGAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS GCA 72 bp TTCTGGGGCAAGGAGACACACACTCCTTATATTCCATaGCAGCTGGGCAAGCTGGACGACAGGCACTGTGGT +
Preference number: 6 (lower is better)
Translates to: FWGKETHTPYIP*QLGKLDDRHCG
Trigger: ACCACAGTGCCTGTCGTCCAGCTTGCCCAGCTGGCATGGAATATAAGGAGTGTGTGTCTCCTTGCCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS GCA 72 bp TTCATCATACCGATCCCCAACCCCAACGGGAAACACTaGCACTCGGTTGGATCTGGCAGCATCTGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: FIIPIPNPNGKH*HSVGSGSICCC
Trigger: ACAGCAGCAGATGCTGCCAGATCCAACCGAGTGGCAGTGTTTCCCGTTGGGGTTGGGGATCGGTATGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 72 bp GCAAGGAGACACACACTCCTTATATTCCATGCCAGCTaGGCAAGCTGGACGACAGGCACTGTGGTCAGTCCA +
Preference number: 6 (lower is better)
Translates to: ARRHTLLIFHAS*ASWTTGTVVSP
Trigger: TGGACTGACCACAGTGCCTGTCGTCCAGCTTGCCCAGCTGGCATGGAATATAAGGAGTGTGTGTCTCCTTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CCA 72 bp CACACAGTCCCCTCTTTCATCCTGGTAGAGCCCTGGTaGGCAGTAGCAGCCTTCAAGACAGACTTCACTGCA +
Preference number: 6 (lower is better)
Translates to: HTVPSFILVEPW*AVAAFKTDFTA
Trigger: TGCAGTGAAGTCTGTCTTGAAGGCTGCTACTGCCCACCAGGGCTCTACCAGGATGAAAGAGGGGACTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 72 bp CAGATGGTATGGAATGTGGCTGGAGCGATGACCTTGTaGCATTCAGCAAACGACGCTGAGAGGAGGACCTGG +
Preference number: 6 (lower is better)
Translates to: QMVWNVAGAMTL*HSANDAERRTW
Trigger: CCAGGTCCTCCTCTCAGCGTCGTTTGCTGAATGCCACAAGGTCATCGCTCCAGCCACATTCCATACCATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 72 bp ACTGAGGCACATACAGATCTGACAGGGCTGATGGTCTaGGACCCAGGTCTCCAGGAACTGATGTCGAACTCC +
Preference number: 6 (lower is better)
Translates to: TEAHTDLTGLMV*DPGLQELMSNS
Trigger: GGAGTTCGACATCAGTTCCTGGAGACCTGGGTCCCAGACCATCAGCCCTGTCAGATCTGTATGTGCCTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CAA 72 bp GTAGAGTCCTTGGGAGGCGTAGGGCATGGAGATGCTTaGGTCACCCTGCGTTACGGTGCCATTGGCAAACAA +
Preference number: 6 (lower is better)
Translates to: VESLGGVGHGDA*VTLRYGAIGKQ
Trigger: TTGTTTGCCAATGGCACCGTAACGCAGGGTGACCAAAGCATCTCCATGCCCTACGCCTCCCAAGGACTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CAA 72 bp CCTCCTTCACACGGAGGCACTGGAGGCAAGTTGCAGTaGAACAGGTCACACACACACTCATACTCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: PPSHGGTGGKLQ*NRSHTHSYSGQ
Trigger: CTGCCCAGAGTATGAGTGTGTGTGTGACCTGTTCAACTGCAACTTGCCTCCAGTGCCTCCGTGTGAAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS TCA 72 bp CCCTCAGGGCAGCTACAGCCGTCTACACATTGCTGCTaGCACACTTCATTGATAGACAGGCTCTGGCAGGTT +
Preference number: 6 (lower is better)
Translates to: PSGQLQPSTHCC*HTSLIDRLWQV
Trigger: AACCTGCCAGAGCCTGTCTATCAATGAAGTGTGTCAGCAGCAATGTGTAGACGGCTGTAGCTGCCCTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS TCA 72 bp TCATGGTACTCTACCACTGCCACGCGGATGCGCTTCTaGGAGATGTGTAACCTCTCCATCATGCCCACCACA +
Preference number: 6 (lower is better)
Translates to: SWYSTTATRMRF*EMCNLSIMPTT
Trigger: TGTGGTGGGCATGATGGAGAGGTTACACATCTCTCAGAAGCGCATCCGCGTGGCAGTGGTAGAGTACCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 72 bp AGGAACGTTTCTGGCAGTCCCCAGCCAGGAGATAACTaGAGCCCCCTGCAAAGCTGTACATGGTCTCATCAA +
Preference number: 6 (lower is better)
Translates to: RNVSGSPQPGDN*SPLQSCTWSHQ
Trigger: TTGATGAGACCATGTACAGCTTTGCAGGGGGCTGCAGTTATCTCCTGGCTGGGGACTGCCAGAAACGTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CCA 72 bp TGCCATCGATTCTGGCCGCAAAGCCAAAGGTCTCACTaGAGAGCTTATAGTACCCAGCCTCGCGTTCTAGGT +
Preference number: 6 (lower is better)
Translates to: CHRFWPQSQRSH*RAYSTQPRVLG
Trigger: ACCTAGAACGCGAGGCTGGGTACTATAAGCTCTCCAGTGAGACCTTTGGCTTTGCGGCCAGAATCGATGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CCA 72 bp GCAACTGTCTTGCTGGCAGATGGTATGGAATGTGGCTaGAGCGATGACCTTGTGGCATTCAGCAAACGACGC +
Preference number: 6 (lower is better)
Translates to: ATVLLADGMECG*SDDLVAFSKRR
Trigger: GCGTCGTTTGCTGAATGCCACAAGGTCATCGCTCCAGCCACATTCCATACCATCTGCCAGCAAGACAGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CAA 72 bp GGTGAAGTACCTGTTGTCGAAGCTCTTGAAGTGCGATaGGCCTGTGACAAGACACTCCCCTGGGCATTCCTC +
Preference number: 6 (lower is better)
Translates to: GEVPVVEALEVR*ACDKTLPWAFL
Trigger: GAGGAATGCCCAGGGGAGTGTCTTGTCACAGGCCAATCGCACTTCAAGAGCTTCGACAACAGGTACTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CAA 72 bp GAAAGTGTGATCCTCGCAGTCCCGGGCCAGCAGATATaGGCAGATCCCACTGAAGGTGAAGTACCTGTTGTC +
Preference number: 6 (lower is better)
Translates to: ESVILAVPGQQI*ADPTEGEVPVV
Trigger: GACAACAGGTACTTCACCTTCAGTGGGATCTGCCAATATCTGCTGGCCCGGGACTGCGAGGATCACACTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CAA 72 bp TCCAAGGAGGTATCCATGATGATGATGACCACTGCTTaGGAGGCCCCAGGCCTGGCTCCGTGGATTTGTGAA +
Preference number: 6 (lower is better)
Translates to: SKEVSMMMMTTA*EAPGLAPWICE
Trigger: TTCACAAATCCACGGAGCCAGGCCTGGGGCCTCCAAAGCAGTGGTCATCATCATCATGGATACCTCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CAA 72 bp AATCACCTCACACACTCGCTCCTGGTGGCAACTGTCTaGCTGGCAGATGGTATGGAATGTGGCTGGAGCGAT +
Preference number: 6 (lower is better)
Translates to: NHLTHSLLVATV*LADGMECGWSD
Trigger: ATCGCTCCAGCCACATTCCATACCATCTGCCAGCAAGACAGTTGCCACCAGGAGCGAGTGTGTGAGGTGATT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CAA 72 bp TGGAGCCCTCCTTCACACGGAGGCACTGGAGGCAAGTaGCAGTTGAACAGGTCACACACACACTCATACTCT +
Preference number: 6 (lower is better)
Translates to: WSPPSHGGTGGK*QLNRSHTHSYS
Trigger: AGAGTATGAGTGTGTGTGTGACCTGTTCAACTGCAACTTGCCTCCAGTGCCTCCGTGTGAAGGAGGGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CAA 90 bp CCCACTGAAGGTGAAGTACCTGTTGTCGAAGCTCTTGAAGTGCGATaGGCCTGTGACAAGACACTCCCCTGGGCATTCCTCATTGCTGCA +
Preference number: 6 (lower is better)
Translates to: PTEGEVPVVEALEVR*ACDKTLPWAFLIAA
Trigger: TGCAGCAATGAGGAATGCCCAGGGGAGTGTCTTGTCACAGGCCAATCGCACTTCAAGAGCTTCGACAACAGGTACTTCACCTTCAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CAA 90 bp CGGGCCAGCAGATATTGGCAGATCCCACTGAAGGTGAAGTACCTGTaGTCGAAGCTCTTGAAGTGCGATTGGCCTGTGACAAGACACTCC +
Preference number: 6 (lower is better)
Translates to: RASRYWQIPLKVKYL*SKLLKCDWPVTRHS
Trigger: GGAGTGTCTTGTCACAGGCCAATCGCACTTCAAGAGCTTCGACAACAGGTACTTCACCTTCAGTGGGATCTGCCAATATCTGCTGGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CAA 90 bp GTAAGAAGCAATCACCTCACACACTCGCTCCTGGTGGCAACTGTCTaGCTGGCAGATGGTATGGAATGTGGCTGGAGCGATGACCTTGTG +
Preference number: 6 (lower is better)
Translates to: VRSNHLTHSLLVATV*LADGMECGWSDDLV
Trigger: CACAAGGTCATCGCTCCAGCCACATTCCATACCATCTGCCAGCAAGACAGTTGCCACCAGGAGCGAGTGTGTGAGGTGATTGCTTCTTAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS TCA 72 bp ACAGGCTCCCCAGGGTGCCACTTGTGGTACAGTGCATaGAGCCATCTTCACAGTAACACATGGTATGGTGGT +
Preference number: 6 (lower is better)
Translates to: TGSPGCHLWYSA*SHLHSNTWYGG
Trigger: ACCACCATACCATGTGTTACTGTGAAGATGGCTTCATGCACTGTACCACAAGTGGCACCCTGGGGAGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS TCA 72 bp AATTCTGACAGTGTGCAGGGTCATCAGGACTCAAGGTaGTTTTCTTTCCAGGAGCCAAGCGCCGACCAGCCA +
Preference number: 6 (lower is better)
Translates to: NSDSVQGHQDSR*FSFQEPSADQP
Trigger: TGGCTGGTCGGCGCTTGGCTCCTGGAAAGAAAATCACCTTGAGTCCTGATGACCCTGCACACTGTCAGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 72 bp CTGAAGGTGAAGTACCTGTTGTCGAAGCTCTTGAAGTaGGATTGGCCTGTGACAAGACACTCCCCTGGGCAT +
Preference number: 6 (lower is better)
Translates to: LKVKYLLSKLLK*DWPVTRHSPGH
Trigger: ATGCCCAGGGGAGTGTCTTGTCACAGGCCAATCGCACTTCAAGAGCTTCGACAACAGGTACTTCACCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS GCA 72 bp ACCAGTCTCCCATCCACTGCCATCTCCATGTTACTGTaGAGCTCAGCAGAGACGCCAGCATGCTTAATCTCA +
Preference number: 6 (lower is better)
Translates to: TSLPSTAISMLL*SSAETPACLIS
Trigger: TGAGATTAAGCATGCTGGCGTCTCTGCTGAGCTGCACAGTAACATGGAGATGGCAGTGGATGGGAGACTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 72 bp ACAGGAGCAAGTGTCATAAATACAGATGTCCAGGTATaGCTCAGGGTCCACCAGCCTGTTGCAGCCCTGGAA +
Preference number: 6 (lower is better)
Translates to: TGASVINTDVQV*LRVHQPVAALE
Trigger: TTCCAGGGCTGCAACAGGCTGGTGGACCCTGAGCCATACCTGGACATCTGTATTTATGACACTTGCTCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CCA 72 bp TCCACACAAACTCCAGAAAACCCAGAACACAGTTTGTaGAAGAAGGAGTTGCCCAGGGTGGCCATGGTGGAG +
Preference number: 6 (lower is better)
Translates to: STQTPENPEHSL*KKELPRVAMVE
Trigger: CTCCACCATGGCCACCCTGGGCAACTCCTTCTTCCACAAACTGTGTTCTGGGTTTTCTGGAGTTTGTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CAA 72 bp GGTCTTGGGGCTAAGCTGCAGTTGGAACTCGTTGTTTaGTGGCGTGTATGTGAGGATGTGGCCAAGATGGGT +
Preference number: 6 (lower is better)
Translates to: GLGAKLQLELVV*WRVCEDVAKMG
Trigger: ACCCATCTTGGCCACATCCTCACATACACGCCACAAAACAACGAGTTCCAACTGCAGCTTAGCCCCAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CAA 72 bp TCTGTGGTGACCGTGCCATCTCGCAACGTGAAGTCATaGGCCCCGTTTTCATCACAGATTCCGCAAAGACCA +
Preference number: 6 (lower is better)
Translates to: SVVTVPSRNVKS*APFSSQIPQRP
Trigger: TGGTCTTTGCGGAATCTGTGATGAAAACGGGGCCAATGACTTCACGTTGCGAGATGGCACGGTCACCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CAA 90 bp TTCATCCAAGAGCTCTCCCTCAGGGCAGCTACAGCCGTCTACACATaGCTGCTGACACACTTCATTGATAGACAGGCTCTGGCAGGTTCT +
Preference number: 6 (lower is better)
Translates to: FIQELSLRAATAVYT*LLTHFIDRQALAGS
Trigger: AGAACCTGCCAGAGCCTGTCTATCAATGAAGTGTGTCAGCAGCAATGTGTAGACGGCTGTAGCTGCCCTGAGGGAGAGCTCTTGGATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CAA 90 bp GACAATGGAGAAAGTGTGATCCTCGCAGTCCCGGGCCAGCAGATATaGGCAGATCCCACTGAAGGTGAAGTACCTGTTGTCGAAGCTCTT +
Preference number: 6 (lower is better)
Translates to: DNGESVILAVPGQQI*ADPTEGEVPVVEAL
Trigger: AAGAGCTTCGACAACAGGTACTTCACCTTCAGTGGGATCTGCCAATATCTGCTGGCCCGGGACTGCGAGGATCACACTTTCTCCATTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CAA 90 bp GTCTTGTTGAAGTGTCTGTCTGACATCAGGACTTGGAAGTTGCCATaGCCATCGATTCTGGCCGCAAAGCCAAAGGTCTCACTGGAGAGC +
Preference number: 6 (lower is better)
Translates to: VLLKCLSDIRTWKLP*PSILAAKPKVSLES
Trigger: GCTCTCCAGTGAGACCTTTGGCTTTGCGGCCAGAATCGATGGCAATGGCAACTTCCAAGTCCTGATGTCAGACAGACACTTCAACAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CAA 90 bp CCACAGGTCTTGTTGAAGTGTCTGTCTGACATCAGGACTTGGAAGTaGCCATTGCCATCGATTCTGGCCGCAAAGCCAAAGGTCTCACTG +
Preference number: 6 (lower is better)
Translates to: PQVLLKCLSDIRTWK*PLPSILAAKPKVSL
Trigger: CAGTGAGACCTTTGGCTTTGCGGCCAGAATCGATGGCAATGGCAACTTCCAAGTCCTGATGTCAGACAGACACTTCAACAAGACCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CAA 90 bp TTCCCATCTTCATCCACACAAACTCCAGAAAACCCAGAACACAGTTaGTGGAAGAAGGAGTTGCCCAGGGTGGCCATGGTGGAGAGGTCT +
Preference number: 6 (lower is better)
Translates to: FPSSSTQTPENPEHS*WKKELPRVAMVERS
Trigger: AGACCTCTCCACCATGGCCACCCTGGGCAACTCCTTCTTCCACAAACTGTGTTCTGGGTTTTCTGGAGTTTGTGTGGATGAAGATGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CAA 90 bp CGAAGCAAAGGTCTTGGGGCTAAGCTGCAGTTGGAACTCGTTGTTTaGTGGCGTGTATGTGAGGATGTGGCCAAGATGGGTAAACCTGAC +
Preference number: 6 (lower is better)
Translates to: RSKGLGAKLQLELVV*WRVCEDVAKMGKPD
Trigger: GTCAGGTTTACCCATCTTGGCCACATCCTCACATACACGCCACAAAACAACGAGTTCCAACTGCAGCTTAGCCCCAAGACCTTTGCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS TCA 72 bp ACCGCACAGCCCACAGGTCTTGTTGAAGTGTCTGTCTaGCATCAGGACTTGGAAGTTGCCATTGCCATCGAT +
Preference number: 6 (lower is better)
Translates to: TAQPTGLVEVSV*HQDLEVAIAID
Trigger: ATCGATGGCAATGGCAACTTCCAAGTCCTGATGTCAGACAGACACTTCAACAAGACCTGTGGGCTGTGCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS GCA 72 bp AGTGTCTGTCTGACATCAGGACTTGGAAGTTGCCATTaGCATCGATTCTGGCCGCAAAGCCAAAGGTCTCAC +
Preference number: 6 (lower is better)
Translates to: SVCLTSGLGSCH*HRFWPQSQRSH
Trigger: GTGAGACCTTTGGCTTTGCGGCCAGAATCGATGGCAATGGCAACTTCCAAGTCCTGATGTCAGACAGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CCA 72 bp AGTGTGTACTTCAAAACCTCACTGGTAGAGGCCACCTaGCTGCCTGTATACTTAATCTGGCTGGTGATGCGC +
Preference number: 6 (lower is better)
Translates to: SVYFKTSLVEAT*LPVYLIWLVMR
Trigger: GCGCATCACCAGCCAGATTAAGTATACAGGCAGCCAGGTGGCCTCTACCAGTGAGGTTTTGAAGTACACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CAA 72 bp ATCCCACTGAAGGTGAAGTACCTGTTGTCGAAGCTCTaGAAGTGCGATTGGCCTGTGACAAGACACTCCCCT +
Preference number: 6 (lower is better)
Translates to: IPLKVKYLLSKL*KCDWPVTRHSP
Trigger: AGGGGAGTGTCTTGTCACAGGCCAATCGCACTTCAAGAGCTTCGACAACAGGTACTTCACCTTCAGTGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CAA 72 bp TCATCCACACAAACTCCAGAAAACCCAGAACACAGTTaGTGGAAGAAGGAGTTGCCCAGGGTGGCCATGGTG +
Preference number: 6 (lower is better)
Translates to: SSTQTPENPEHS*WKKELPRVAMV
Trigger: CACCATGGCCACCCTGGGCAACTCCTTCTTCCACAAACTGTGTTCTGGGTTTTCTGGAGTTTGTGTGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000112254.8
CDS CAA 72 bp GCAAAGGTCTTGGGGCTAAGCTGCAGTTGGAACTCGTaGTTTTGTGGCGTGTATGTGAGGATGTGGCCAAGA +
Preference number: 6 (lower is better)
Translates to: AKVLGLSCSWNS*FCGVYVRMWPR
Trigger: TCTTGGCCACATCCTCACATACACGCCACAAAACAACGAGTTCCAACTGCAGCTTAGCCCCAAGACCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CAA 90 bp GGAAGAAAGGGAGAAAAGGTCCCAAGCCTACCTGGGCATTCCTCATaGCTGCAGATCCATAGGCTGTTTCTGCAGATACAAGTGTTGCAG +
Preference number: 6 (lower is better)
Translates to: GRKGEKVPSLPGHSS*LQIHRLFLQIQVLQ
Trigger: CTGCAACACTTGTATCTGCAGAAACAGCCTATGGATCTGCAGCAATGAGGAATGCCCAGGTAGGCTTGGGACCTTTTCTCCCTTTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
CDS CAA 90 bp AAGACCATGCATCTTCGAAGCAAAGGTCTTGGGGCTAAGCTGCAGTaGGAACTCGTTGTTTTGTGGCGTGTATGTGAGGATGTGGCCAAG +
Preference number: 6 (lower is better)
Translates to: KTMHLRSKGLGAKLQ*ELVVLWRVCEDVAK
Trigger: CTTGGCCACATCCTCACATACACGCCACAAAACAACGAGTTCCAACTGCAGCTTAGCCCCAAGACCTTTGCTTCGAAGATGCATGGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS GCA 72 bp CCATGCATCTTCGAAGCAAAGGTCTTGGGGCTAAGCTaGAGTTGGAACTCGTTGTTTTGTGGCGTGTATGTG +
Preference number: 6 (lower is better)
Translates to: PCIFEAKVLGLS*SWNSLFCGVYV
Trigger: CACATACACGCCACAAAACAACGAGTTCCAACTGCAGCTTAGCCCCAAGACCTTTGCTTCGAAGATGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 72 bp CAGGTCTTGTTGAAGTGTCTGTCTGACATCAGGACTTaGAAGTTGCCATTGCCATCGATTCTGGCCGCAAAG +
Preference number: 6 (lower is better)
Translates to: QVLLKCLSDIRT*KLPLPSILAAK
Trigger: CTTTGCGGCCAGAATCGATGGCAATGGCAACTTCCAAGTCCTGATGTCAGACAGACACTTCAACAAGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CAA 72 bp AAGTGTCTGTCTGACATCAGGACTTGGAAGTTGCCATaGCCATCGATTCTGGCCGCAAAGCCAAAGGTCTCA +
Preference number: 6 (lower is better)
Translates to: KCLSDIRTWKLP*PSILAAKPKVS
Trigger: TGAGACCTTTGGCTTTGCGGCCAGAATCGATGGCAATGGCAACTTCCAAGTCCTGATGTCAGACAGACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CAA 90 bp TCTTCCGCGAAGATGTTAAAATCACCGCACAGCCCACAGGTCTTGTaGAAGTGTCTGTCTGACATCAGGACTTGGAAGTTGCCATTGCCA +
Preference number: 6 (lower is better)
Translates to: SSAKMLKSPHSPQVL*KCLSDIRTWKLPLP
Trigger: TGGCAATGGCAACTTCCAAGTCCTGATGTCAGACAGACACTTCAACAAGACCTGTGGGCTGTGCGGTGATTTTAACATCTTCGCGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CAA 90 bp ATCTTCGAAGCAAAGGTCTTGGGGCTAAGCTGCAGTTGGAACTCGTaGTTTTGTGGCGTGTATGTGAGGATGTGGCCAAGATGGGTAAAC +
Preference number: 6 (lower is better)
Translates to: IFEAKVLGLSCSWNS*FCGVYVRMWPRWVN
Trigger: GTTTACCCATCTTGGCCACATCCTCACATACACGCCACAAAACAACGAGTTCCAACTGCAGCTTAGCCCCAAGACCTTTGCTTCGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CCA 72 bp CCAAGATACACAGACAGGCTCATTCTCTTGCCATCTTaGAAGTTCCCGAGAATGGAGAAGGAACGTTTCTGG +
Preference number: 6 (lower is better)
Translates to: PRYTDRLILLPS*KFPRMEKERFW
Trigger: CCAGAAACGTTCCTTCTCCATTCTCGGGAACTTCCAAGATGGCAAGAGAATGAGCCTGTCTGTGTATCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CAA 72 bp CCCAAGATACACAGACAGGCTCATTCTCTTGCCATCTaGGAAGTTCCCGAGAATGGAGAAGGAACGTTTCTG +
Preference number: 6 (lower is better)
Translates to: PKIHRQAHSLAI*EVPENGEGTFL
Trigger: CAGAAACGTTCCTTCTCCATTCTCGGGAACTTCCAAGATGGCAAGAGAATGAGCCTGTCTGTGTATCTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CAA 72 bp TTGTTGAAGTGTCTGTCTGACATCAGGACTTGGAAGTaGCCATTGCCATCGATTCTGGCCGCAAAGCCAAAG +
Preference number: 6 (lower is better)
Translates to: LLKCLSDIRTWK*PLPSILAAKPK
Trigger: CTTTGGCTTTGCGGCCAGAATCGATGGCAATGGCAACTTCCAAGTCCTGATGTCAGACAGACACTTCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CAA 72 bp GCGAAGATGTTAAAATCACCGCACAGCCCACAGGTCTaGTTGAAGTGTCTGTCTGACATCAGGACTTGGAAG +
Preference number: 6 (lower is better)
Translates to: AKMLKSPHSPQV*LKCLSDIRTWK
Trigger: CTTCCAAGTCCTGATGTCAGACAGACACTTCAACAAGACCTGTGGGCTGTGCGGTGATTTTAACATCTTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CAA 72 bp CATCTTCGAAGCAAAGGTCTTGGGGCTAAGCTGCAGTaGGAACTCGTTGTTTTGTGGCGTGTATGTGAGGAT +
Preference number: 6 (lower is better)
Translates to: HLRSKGLGAKLQ*ELVVLWRVCED
Trigger: ATCCTCACATACACGCCACAAAACAACGAGTTCCAACTGCAGCTTAGCCCCAAGACCTTTGCTTCGAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CAA 90 bp TCATCTTCCGCGAAGATGTTAAAATCACCGCACAGCCCACAGGTCTaGTTGAAGTGTCTGTCTGACATCAGGACTTGGAAGTTGCCATTG +
Preference number: 6 (lower is better)
Translates to: SSSAKMLKSPHSPQV*LKCLSDIRTWKLPL
Trigger: CAATGGCAACTTCCAAGTCCTGATGTCAGACAGACACTTCAACAAGACCTGTGGGCTGTGCGGTGATTTTAACATCTTCGCGGAAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8
CDS CAA 90 bp TCATCACAGATTCCGCAAAGACCATGCATCTTCGAAGCAAAGGTCTaGGGGCTAAGCTGCAGTTGGAACTCGTTGTTTTGTGGCGTGTAT +
Preference number: 6 (lower is better)
Translates to: SSQIPQRPCIFEAKV*GLSCSWNSLFCGVY
Trigger: ATACACGCCACAAAACAACGAGTTCCAACTGCAGCTTAGCCCCAAGACCTTTGCTTCGAAGATGCATGGTCTTTGCGGAATCTGTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CAA 72 bp ATTCCGCAAAGACCATGCATCTTCGAAGCAAAGGTCTaGGGGCTAAGCTGCAGTTGGAACTCGTTGTTTTGT +
Preference number: 6 (lower is better)
Translates to: IPQRPCIFEAKV*GLSCSWNSLFC
Trigger: ACAAAACAACGAGTTCCAACTGCAGCTTAGCCCCAAGACCTTTGCTTCGAAGATGCATGGTCTTTGCGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112254.8
ENSMUST00000147101.2
CDS CAA 72 bp AAGATGTTAAAATCACCGCACAGCCCACAGGTCTTGTaGAAGTGTCTGTCTGACATCAGGACTTGGAAGTTG +
Preference number: 6 (lower is better)
Translates to: KMLKSPHSPQVL*KCLSDIRTWKL
Trigger: CAACTTCCAAGTCCTGATGTCAGACAGACACTTCAACAAGACCTGTGGGCTGTGCGGTGATTTTAACATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000100941.9
ENSMUST00000112253.6
ENSMUST00000112254.8