Pregenerated sensors for VWCE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043789Ensembl transcript IDs: ENSMUST00000055115.9, ENSMUST00000235938.2
Found 195 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATACAGGGCAGCACTCGCCATCCGGGTGGAAGGGGTAGGTACAGGTaGTGGGACAGTCCACAGGTGAACAGGCCACTGAGCCCAGCAGGC | + |
|
Preference number: 1 (lower is better) Translates to: IQGSTRHPGGRGRYR*WDSPQVNRPLSPAG Trigger: GCCTGCTGGGCTCAGTGGCCTGTTCACCTGTGGACTGTCCCATCACCTGTACCTACCCCTTCCACCCGGATGGCGAGTGCTGCCCTGTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235938.2 |
||
| 3UTR TCA 90 bp | GGATCACCCGAGGCATGGCTCTGCCCGAGTGAGGGTGGACATTGCTaGCTTAGTGTGCCAGGGCCACGGGGACCAACACAGACAATGGCA | + |
|
Preference number: 1 (lower is better) Translates to: GSPEAWLCPSEGGHC*LSVPGPRGPTQTMA Trigger: TGCCATTGTCTGTGTTGGTCCCCGTGGCCCTGGCACACTAAGTCAGCAATGTCCACCCTCACTCGGGCAGAGCCATGCCTCGGGTGATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR GCA 90 bp | GAATCCGGATGGGGTGCGGGCAAGAGTCCACGCAGTCTGTCCTCTTaGAGCTCACAGAGCCGTCTGCCTGGCAGACGCATAACTCACAGG | + |
|
Preference number: 1 (lower is better) Translates to: ESGWGAGKSPRSLSS*SSQSRLPGRRITHR Trigger: CCTGTGAGTTATGCGTCTGCCAGGCAGACGGCTCTGTGAGCTGCAAGAGGACAGACTGCGTGGACTCTTGCCCGCACCCCATCCGGATTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235938.2 |
||
| 3UTR GCA 90 bp | GCAGAAAGCAAAAGGGAGCAAGCTCTGCCCTCCCTCACCTGTCCCTaGCCCCGCCTTCACTGGCCTCTGACATCCCTACTTCACACCCTA | + |
|
Preference number: 1 (lower is better) Translates to: AESKREQALPSLTCP*PRLHWPLTSLLHTL Trigger: TAGGGTGTGAAGTAGGGATGTCAGAGGCCAGTGAAGGCGGGGGCAGGGACAGGTGAGGGAGGGCAGAGCTTGCTCCCTTTTGCTTTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR GCA 90 bp | CCTGCTGAACAGTCAGGACAGCACTGTCCAGGAATCCGGATGGGGTaGGGGCAAGAGTCCACGCAGTCTGTCCTCTTGCAGCTCACAGAG | + |
|
Preference number: 1 (lower is better) Translates to: PAEQSGQHCPGIRMG*GQESTQSVLLQLTE Trigger: CTCTGTGAGCTGCAAGAGGACAGACTGCGTGGACTCTTGCCCGCACCCCATCCGGATTCCTGGACAGTGCTGTCCTGACTGTTCAGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235938.2 |
||
| 3UTR CCA 90 bp | TGCAGCCTGCTGAACAGTCAGGACAGCACTGTCCAGGAATCCGGATaGGGTGCGGGCAAGAGTCCACGCAGTCTGTCCTCTTGCAGCTCA | + |
|
Preference number: 1 (lower is better) Translates to: CSLLNSQDSTVQESG*GAGKSPRSLSSCSS Trigger: TGAGCTGCAAGAGGACAGACTGCGTGGACTCTTGCCCGCACCCCATCCGGATTCCTGGACAGTGCTGTCCTGACTGTTCAGCAGGCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235938.2 |
||
| 3UTR TCA 90 bp | GAATGGCTTTACATAGAAAGTGATGGGTGCGGATCAGCTGAGTGCTaGCACCTGCTGGCCACTGTGGGTGCTACACACAAACACTTGGGC | + |
|
Preference number: 1 (lower is better) Translates to: EWLYIESDGCGSAEC*HLLATVGATHKHLG Trigger: GCCCAAGTGTTTGTGTGTAGCACCCACAGTGGCCAGCAGGTGTCAGCACTCAGCTGATCCGCACCCATCACTTTCTATGTAAAGCCATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR CCA 90 bp | ATTGCTGACTTAGTGTGCCAGGGCCACGGGGACCAACACAGACAATaGCAGGGGCCAAACAGAAACATAGGTTCTCACAATTCTGGAGAC | + |
|
Preference number: 1 (lower is better) Translates to: IADLVCQGHGDQHRQ*QGPNRNIGSHNSGD Trigger: GTCTCCAGAATTGTGAGAACCTATGTTTCTGTTTGGCCCCTGCCATTGTCTGTGTTGGTCCCCGTGGCCCTGGCACACTAAGTCAGCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR CCA 90 bp | TCTACAGAACCCTGGCTATCCTGGAACTCACTACATAGACCAGGCTaGCCTAGTACTCATAGAGATCAGCCTGCTTCTGCCTCCCAACCT | + |
|
Preference number: 1 (lower is better) Translates to: STEPWLSWNSLHRPG*PSTHRDQPASASQP Trigger: AGGTTGGGAGGCAGAAGCAGGCTGATCTCTATGAGTACTAGGCCAGCCTGGTCTATGTAGTGAGTTCCAGGATAGCCAGGGTTCTGTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR TCA 90 bp | TGGCAGGGGCCAAACAGAAACATAGGTTCTCACAATTCTGGAGACTaGAAGTCCAAAGCCAGGGGGTGTTTGGGTTATTTCTTCTGGTGC | + |
|
Preference number: 1 (lower is better) Translates to: WQGPNRNIGSHNSGD*KSKARGCLGYFFWC Trigger: GCACCAGAAGAAATAACCCAAACACCCCCTGGCTTTGGACTTTCAGTCTCCAGAATTGTGAGAACCTATGTTTCTGTTTGGCCCCTGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR CCA 90 bp | GAGGTAGTGGTGTTATTTTTGAAACAGGGTCTCTCTACAGAACCCTaGCTATCCTGGAACTCACTACATAGACCAGGCTGGCCTAGTACT | + |
|
Preference number: 1 (lower is better) Translates to: EVVVLFLKQGLSTEP*LSWNSLHRPGWPST Trigger: AGTACTAGGCCAGCCTGGTCTATGTAGTGAGTTCCAGGATAGCCAGGGTTCTGTAGAGAGACCCTGTTTCAAAAATAACACCACTACCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR CCA 90 bp | GTGTTATTTTTGAAACAGGGTCTCTCTACAGAACCCTGGCTATCCTaGAACTCACTACATAGACCAGGCTGGCCTAGTACTCATAGAGAT | + |
|
Preference number: 1 (lower is better) Translates to: VLFLKQGLSTEPWLS*NSLHRPGWPSTHRD Trigger: ATCTCTATGAGTACTAGGCCAGCCTGGTCTATGTAGTGAGTTCCAGGATAGCCAGGGTTCTGTAGAGAGACCCTGTTTCAAAAATAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR CCA 90 bp | ATAATGGGGGAAGTTAAACATCTTTGCTTGGCTTTGGGTGTTGTTTaGGGGGAGCGGTGTTTGTTTGTTGTGGGAGGTAGTGGTGTTATT | + |
|
Preference number: 1 (lower is better) Translates to: IMGEVKHLCLALGVV*GERCLFVVGGSGVI Trigger: AATAACACCACTACCTCCCACAACAAACAAACACCGCTCCCCCCAAACAACACCCAAAGCCAAGCAAAGATGTTTAACTTCCCCCATTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR TCA 90 bp | AAAGCCAGGGGGTGTTTGGGTTATTTCTTCTGGTGCCTCTCTCCTTaGTTTATAGATGAACCATCTTACTCTAAGGTCTTCTCTGAACAC | + |
|
Preference number: 1 (lower is better) Translates to: KARGCLGYFFWCLSP*FIDEPSYSKVFSEH Trigger: GTGTTCAGAGAAGACCTTAGAGTAAGATGGTTCATCTATAAATCAAGGAGAGAGGCACCAGAAGAAATAACCCAAACACCCCCTGGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR TCA 90 bp | ATAAAGGTCTCTAATAGGTCTACTGGAACTTCGCTGAGTTCTTTCTaGACTGAATGGCTTTACATAGAAAGTGATGGGTGCGGATCAGCT | + |
|
Preference number: 1 (lower is better) Translates to: IKVSNRSTGTSLSSF*TEWLYIESDGCGSA Trigger: AGCTGATCCGCACCCATCACTTTCTATGTAAAGCCATTCAGTTCAGAAAGAACTCAGCGAAGTTCCAGTAGACCTATTAGAGACCTTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR CAA 90 bp | GGAATCCGGATGGGGTGCGGGCAAGAGTCCACGCAGTCTGTCCTCTaGCAGCTCACAGAGCCGTCTGCCTGGCAGACGCATAACTCACAG | + |
|
Preference number: 2 (lower is better) Translates to: GIRMGCGQESTQSVL*QLTEPSAWQTHNSQ Trigger: CTGTGAGTTATGCGTCTGCCAGGCAGACGGCTCTGTGAGCTGCAAGAGGACAGACTGCGTGGACTCTTGCCCGCACCCCATCCGGATTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235938.2 |
||
| 3UTR-3UTR GCA 90 bp | GTAGCCCAGGGTGGCCTTGACCTCCTGACCACCCAACCTCAGCATGCCCAGTTCAAAGGGAGCAAGCTCTaGCCTCCCTCACCTGTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: VAQGGLDLLTTQPQHAQFKGSKL*PPSPVP Trigger: AGGGACAGGTGAGGGAGGGCAGAGCTTGCTCCCTTT...GAACTGGGCATGCTGAGGTTGGGTGGTCAGGAGGTCAAGGCCACCCTGGGCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR CAA 90 bp | GGATCACCAGGCGACCAGATCTGTCCGATCGGAAACTCAACCCCGTaGTCATCCAGAGAGCAGCCTGTGGTGGGTGTGGGTTCCCGACAG | + |
|
Preference number: 2 (lower is better) Translates to: GSPGDQICPIGNSTP*SSREQPVVGVGSRQ Trigger: CTGTCGGGAACCCACACCCACCACAGGCTGCTCTCTGGATGACAACGGGGTTGAGTTTCCGATCGGACAGATCTGGTCGCCTGGTGATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235938.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCGGAAACTCAACCCCGTTGTCATCCAGAGAGCAGCCTGTGGTGGGTGTGGGTAAAACAGCACTGTCCTaGGCCCAGCAGCCACTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: IGNSTPLSSREQPVVGVGKTALS*AQQPLL Trigger: GAGGAGTGGCTGCTGGGCCCAGGACAGTGCTGTTTT...ACCCACACCCACCACAGGCTGCTCTCTGGATGACAACGGGGTTGAGTTTCCGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235938.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGGGTGGCCTTGACCTCCTGACCACCCAACCTCAGCATGCCCAGTTCTGCAGTTCAATGTCAAGAGTATaGGCTGATGGGATCACCCGA | + |
|
Preference number: 2 (lower is better) Translates to: QGGLDLLTTQPQHAQFCSSMSRV*ADGITR Trigger: TCGGGTGATCCCATCAGCGCATACTCTTGACATTGA...ACTGCAGAACTGGGCATGCTGAGGTTGGGTGGTCAGGAGGTCAAGGCCACCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR-3UTR CCA 90 bp | TTCTTAGTCATCAATGACTCCCCACCACTACTACTCCTGACTCCCGTCCCCCTGTGCCCCCGCCTTCACTaGCCTCTGACATCCCTACTT | + |
|
Preference number: 2 (lower is better) Translates to: FLVINDSPPLLLLTPVPLCPRLH*PLTSLL Trigger: AAGTAGGGATGTCAGAGGCCAGTGAAGGCGGGGGCA...CAGGGGGACGGGAGTCAGGAGTAGTAGTGGTGGGGAGTCATTGATGACTAAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR-3UTR TCA 90 bp | CTGGCCACTGTGGGTGCTACACACAAACACTTGGGCAGGTACCCTACTGTCCTACACAATTCTGGAGACTaGAAGTCCAAAGCCAGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: LATVGATHKHLGRYPTVLHNSGD*KSKARG Trigger: CCCCCTGGCTTTGGACTTTCAGTCTCCAGAATTGTG...TAGGACAGTAGGGTACCTGCCCAAGTGTTTGTGTGTAGCACCCACAGTGGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR-3UTR TCA 90 bp | CTGGCCACTGTGGGTGCTACACACAAACACTTGGGCAGGTACCCTACTGTCCTATGGACTGTGAACTTGTaGGGAGAGAGGTTTAGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: LATVGATHKHLGRYPTVLWTVNL*GERFSS Trigger: ACTGCTAAACCTCTCTCCTCACAAGTTCACAGTCCA...TAGGACAGTAGGGTACCTGCCCAAGTGTTTGTGTGTAGCACCCACAGTGGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR-3UTR TCA 90 bp | GGAGGTAGTGGTGTTATTTTTGAAACAGGGTCTCTCTACAGAACCCTGGCTATCGGATCAGCTGAGTGCTaGCACCTGCTGGCCACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: GGSGVIFETGSLYRTLAIGSAEC*HLLATV Trigger: CACAGTGGCCAGCAGGTGTCAGCACTCAGCTGATCC...GATAGCCAGGGTTCTGTAGAGAGACCCTGTTTCAAAAATAACACCACTACCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGGCCACTGTGGGTGCTACACACAAACACTTGGGCAGGTACCCTACTGTCCTACCGGTTTTACCCCTGTaGTCACACACATTCCACATT | + |
|
Preference number: 2 (lower is better) Translates to: LATVGATHKHLGRYPTVLPVLPL*SHTFHI Trigger: AATGTGGAATGTGTGTGACCACAGGGGTAAAACCGG...TAGGACAGTAGGGTACCTGCCCAAGTGTTTGTGTGTAGCACCCACAGTGGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR-3UTR TCA 90 bp | TTGTTGTGGGAGGTAGTGGTGTTATTTTTGAAACAGGGTCTCTCTACAGAACCCGAGGGTGGACATTGCTaGCTTAGTGTGCCAGGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: LLWEVVVLFLKQGLSTEPEGGHC*LSVPGP Trigger: TGGCCCTGGCACACTAAGTCAGCAATGTCCACCCTC...GGGTTCTGTAGAGAGACCCTGTTTCAAAAATAACACCACTACCTCCCACAACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGGCCACTGTGGGTGCTACACACAAACACTTGGGCAGGTACCCTACTGTCCTATGGGGACTTAACACATaGTCTGAACACATCTTGACA | + |
|
Preference number: 2 (lower is better) Translates to: LATVGATHKHLGRYPTVLWGLNT*SEHILT Trigger: TGTCAAGATGTGTTCAGAGCATGTGTTAAGTCCCCA...TAGGACAGTAGGGTACCTGCCCAAGTGTTTGTGTGTAGCACCCACAGTGGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR-3UTR TCA 90 bp | ACACCTGCTGGCCACTGTGGGTGCTACACACAAACACTTGGGCAGGTACCCTACGCTCTGAACACATCTTaGCATGAGTATTACATGAAA | + |
|
Preference number: 2 (lower is better) Translates to: TPAGHCGCYTQTLGQVPYALNTS*HEYYMK Trigger: TTTCATGTAATACTCATGTCAAGATGTGTTCAGAGC...GTAGGGTACCTGCCCAAGTGTTTGTGTGTAGCACCCACAGTGGCCAGCAGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR-3UTR TCA 90 bp | ACAGGTATGAGCCACCATGCCTTAACTAACATTACTTTACAAAAGATAAAGGTCCCCCATCCTGGACTGTaGACTTGTGAGGAGAGAGGT | + |
|
Preference number: 2 (lower is better) Translates to: TGMSHHALTNITLQKIKVPHPGL*TCEERG Trigger: ACCTCTCTCCTCACAAGTTCACAGTCCAGGATGGGG...GACCTTTATCTTTTGTAAAGTAATGTTAGTTAAGGCATGGTGGCTCATACCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR-3UTR CCA 90 bp | TCACTGGCCTCTGACATCCCTACTTCACACCCTAAAGTACACTTGTTTTCTGAGAGGTTCTCACAATTCTaGAGACTGAAAGTCCAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: SLASDIPTSHPKVHLFSERFSQF*RLKVQS Trigger: GCTTTGGACTTTCAGTCTCCAGAATTGTGAGAACCT...CTCAGAAAACAAGTGTACTTTAGGGTGTGAAGTAGGGATGTCAGAGGCCAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR-3UTR TCA 90 bp | AAACATAGGTTCTCACAATTCTGGAGACTGAAAGTCCAAAGCCAGGGGGTGTTTTGGTGCCTCTCTCCTTaGTTTATAGATGAACCATCT | + |
|
Preference number: 2 (lower is better) Translates to: KHRFSQFWRLKVQSQGVFWCLSP*FIDEPS Trigger: AGATGGTTCATCTATAAATCAAGGAGAGAGGCACCA...AAACACCCCCTGGCTTTGGACTTTCAGTCTCCAGAATTGTGAGAACCTATGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR-3UTR TCA 90 bp | CCTGCCCCTGTGGCCAATGCTAAGATAATGGGGGAAGTTAAACATCTTTGCTTGGAGTTCTTTCTGAACTaGATGGCTTTACATAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: PAPVANAKIMGEVKHLCLEFFLN*MALHRK Trigger: CTTTCTATGTAAAGCCATTCAGTTCAGAAAGAACTC...CAAGCAAAGATGTTTAACTTCCCCCATTATCTTAGCATTGGCCACAGGGGCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGTATGAGCCACCATGCCTTAACTAACATTACTTTACAAAAGATAAAGGTCGACCAACACAGACAATaGCAGGGGCCAAACAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: TGMSHHALTNITLQKIKVDQHRQ*QGPNRN Trigger: GTTTCTGTTTGGCCCCTGCCATTGTCTGTGTTGGTC...GACCTTTATCTTTTGTAAAGTAATGTTAGTTAAGGCATGGTGGCTCATACCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTGTGGGAGGTAGTGGTGTTATTTTTGAAACAGGGTCTCTCTACAGAACCCAAAACACTTCTAGGATaGATGTCACATGACGTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: LLWEVVVLFLKQGLSTEPKTLLG*MSHDVN Trigger: ATTGACGTCATGTGACATCCATCCTAGAAGTGTTTT...GGGTTCTGTAGAGAGACCCTGTTTCAAAAATAACACCACTACCTCCCACAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR TCA 72 bp | GAGGCATGGCTCTGCCCGAGTGAGGGTGGACATTGCTaGCTTAGTGTGCCAGGGCCACGGGGACCAACACAG | + |
|
Preference number: 3 (lower is better) Translates to: EAWLCPSEGGHC*LSVPGPRGPTQ Trigger: CTGTGTTGGTCCCCGTGGCCCTGGCACACTAAGTCAGCAATGTCCACCCTCACTCGGGCAGAGCCATGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR GCA 72 bp | TGGGGTGCGGGCAAGAGTCCACGCAGTCTGTCCTCTTaGAGCTCACAGAGCCGTCTGCCTGGCAGACGCATA | + |
|
Preference number: 3 (lower is better) Translates to: WGAGKSPRSLSS*SSQSRLPGRRI Trigger: TATGCGTCTGCCAGGCAGACGGCTCTGTGAGCTGCAAGAGGACAGACTGCGTGGACTCTTGCCCGCACCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235938.2 |
||
| 3UTR GCA 72 bp | CAGTCAGGACAGCACTGTCCAGGAATCCGGATGGGGTaGGGGCAAGAGTCCACGCAGTCTGTCCTCTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QSGQHCPGIRMG*GQESTQSVLLQ Trigger: CTGCAAGAGGACAGACTGCGTGGACTCTTGCCCGCACCCCATCCGGATTCCTGGACAGTGCTGTCCTGACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235938.2 |
||
| 3UTR CCA 72 bp | CTGAACAGTCAGGACAGCACTGTCCAGGAATCCGGATaGGGTGCGGGCAAGAGTCCACGCAGTCTGTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LNSQDSTVQESG*GAGKSPRSLSS Trigger: AGAGGACAGACTGCGTGGACTCTTGCCCGCACCCCATCCGGATTCCTGGACAGTGCTGTCCTGACTGTTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235938.2 |
||
| 3UTR CCA 72 bp | GTGATGGGTGCGGATCAGCTGAGTGCTGACACCTGCTaGCCACTGTGGGTGCTACACACAAACACTTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VMGADQLSADTC*PLWVLHTNTWA Trigger: TGCCCAAGTGTTTGTGTGTAGCACCCACAGTGGCCAGCAGGTGTCAGCACTCAGCTGATCCGCACCCATCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR TCA 72 bp | ACCCCTGTGGTCACACACATTCCACATTCGAGGCCATaGGCCGAGAGCTCTATCTGGCATGTCCCGGGCATT | + |
|
Preference number: 3 (lower is better) Translates to: TPVVTHIPHSRP*AESSIWHVPGI Trigger: AATGCCCGGGACATGCCAGATAGAGCTCTCGGCTCATGGCCTCGAATGTGGAATGTGTGTGACCACAGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR GCA 72 bp | AAAGTGATGGGTGCGGATCAGCTGAGTGCTGACACCTaGTGGCCACTGTGGGTGCTACACACAAACACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: KVMGADQLSADT*WPLWVLHTNTW Trigger: CCAAGTGTTTGTGTGTAGCACCCACAGTGGCCAGCAGGTGTCAGCACTCAGCTGATCCGCACCCATCACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR-3UTR CAA 90 bp | ACACCTGCTGGCCACTGTGGGTGCTACACACAAACACTTGGGCAGGTACCCTACAAAGCCAGGGGGTGTTaGGGTTATTTCTTCTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: TPAGHCGCYTQTLGQVPYKARGC*GYFFWC Trigger: GCACCAGAAGAAATAACCCAAACACCCCCTGGCTTT...GTAGGGTACCTGCCCAAGTGTTTGTGTGTAGCACCCACAGTGGCCAGCAGGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR TCA 72 bp | CAGCAGGCAGATGCAGCTCAGACAGGGGTCGAGCACTaGCGGGAACGTTTCGTTGTTGTAGAAGATTCTACC | + |
|
Preference number: 3 (lower is better) Translates to: QQADAAQTGVEH*RERFVVVEDST Trigger: GGTAGAATCTTCTACAACAACGAAACGTTCCCGTCAGTGCTCGACCCCTGTCTGAGCTGCATCTGCCTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235938.2 |
||
| 3UTR CCA 72 bp | CCCTGGCTATCCTGGAACTCACTACATAGACCAGGCTaGCCTAGTACTCATAGAGATCAGCCTGCTTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: PWLSWNSLHRPG*PSTHRDQPASA Trigger: GGCAGAAGCAGGCTGATCTCTATGAGTACTAGGCCAGCCTGGTCTATGTAGTGAGTTCCAGGATAGCCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR TCA 72 bp | TACATAGAAAGTGATGGGTGCGGATCAGCTGAGTGCTaGCACCTGCTGGCCACTGTGGGTGCTACACACAAA | + |
|
Preference number: 3 (lower is better) Translates to: YIESDGCGSAEC*HLLATVGATHK Trigger: TTTGTGTGTAGCACCCACAGTGGCCAGCAGGTGTCAGCACTCAGCTGATCCGCACCCATCACTTTCTATGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR CCA 72 bp | TTAGTGTGCCAGGGCCACGGGGACCAACACAGACAATaGCAGGGGCCAAACAGAAACATAGGTTCTCACAAT | + |
|
Preference number: 3 (lower is better) Translates to: LVCQGHGDQHRQ*QGPNRNIGSHN Trigger: ATTGTGAGAACCTATGTTTCTGTTTGGCCCCTGCCATTGTCTGTGTTGGTCCCCGTGGCCCTGGCACACTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTAGTCATCAATGACTCCCCACCACTACTACTCCTGACTCCCGTCCCCCTGCACCCTAAAGTACACTaGTTTTCTGAGCACCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: FLVINDSPPLLLLTPVPLHPKVH*FSEHLL Trigger: GAGCAGGTGCTCAGAAAACAAGTGTACTTTAGGGTG...CAGGGGGACGGGAGTCAGGAGTAGTAGTGGTGGGGAGTCATTGATGACTAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR CCA 72 bp | GCAGGGGCCAAACAGAAACATAGGTTCTCACAATTCTaGAGACTGAAAGTCCAAAGCCAGGGGGTGTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: AGAKQKHRFSQF*RLKVQSQGVFG Trigger: CCCAAACACCCCCTGGCTTTGGACTTTCAGTCTCCAGAATTGTGAGAACCTATGTTTCTGTTTGGCCCCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR CCA 72 bp | TTGAAACAGGGTCTCTCTACAGAACCCTGGCTATCCTaGAACTCACTACATAGACCAGGCTGGCCTAGTACT | + |
|
Preference number: 3 (lower is better) Translates to: LKQGLSTEPWLS*NSLHRPGWPST Trigger: AGTACTAGGCCAGCCTGGTCTATGTAGTGAGTTCCAGGATAGCCAGGGTTCTGTAGAGAGACCCTGTTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR CCA 72 bp | GTGTTATTTTTGAAACAGGGTCTCTCTACAGAACCCTaGCTATCCTGGAACTCACTACATAGACCAGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VLFLKQGLSTEP*LSWNSLHRPGW Trigger: CCAGCCTGGTCTATGTAGTGAGTTCCAGGATAGCCAGGGTTCTGTAGAGAGACCCTGTTTCAAAAATAACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR CCA 72 bp | GAAGTTAAACATCTTTGCTTGGCTTTGGGTGTTGTTTaGGGGGAGCGGTGTTTGTTTGTTGTGGGAGGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: EVKHLCLALGVV*GERCLFVVGGS Trigger: ACTACCTCCCACAACAAACAAACACCGCTCCCCCCAAACAACACCCAAAGCCAAGCAAAGATGTTTAACTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR TCA 72 bp | CCAAACAGAAACATAGGTTCTCACAATTCTGGAGACTaGAAGTCCAAAGCCAGGGGGTGTTTGGGTTATTTC | + |
|
Preference number: 3 (lower is better) Translates to: PNRNIGSHNSGD*KSKARGCLGYF Trigger: GAAATAACCCAAACACCCCCTGGCTTTGGACTTTCAGTCTCCAGAATTGTGAGAACCTATGTTTCTGTTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR TCA 72 bp | TCTAATAGGTCTACTGGAACTTCGCTGAGTTCTTTCTaGACTGAATGGCTTTACATAGAAAGTGATGGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SNRSTGTSLSSF*TEWLYIESDGC Trigger: GCACCCATCACTTTCTATGTAAAGCCATTCAGTTCAGAAAGAACTCAGCGAAGTTCCAGTAGACCTATTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR TCA 72 bp | TGGGGACTTAACACATGCTCTGAACACATCTTGACATaGGTATTACATGAAATCAGTGTTGAAAACAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: WGLNTCSEHILT*VLHEISVENKA Trigger: TGCTTTGTTTTCAACACTGATTTCATGTAATACTCATGTCAAGATGTGTTCAGAGCATGTGTTAAGTCCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR TCA 90 bp | TGTCCTGGGCCCAGCAGCCACTCCTCTCGAGGGCACTCCAGCTCTGGACATGGTCGTCACCACCCCCACTaGACACAGCCCCATCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CPGPSSHSSRGHSSSGHGRHHPH*TQPHPC Trigger: ACACGGATGGGGCTGTGTTCAGTGGGGGTGGTGACG...ACCATGTCCAGAGCTGGAGTGCCCTCGAGAGGAGTGGCTGCTGGGCCCAGGACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235938.2 |
||
| CDS-3UTR GCA 90 bp | GTAGCCCAGGGTGGCCTTGACCTCCTGACCACCCAACCTCAGCATGCCCAGTTCGGAATCCGGATGGGGTaGGGGCAAGAGTCCACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VAQGGLDLLTTQPQHAQFGIRMG*GQESTQ Trigger: CTGCGTGGACTCTTGCCCGCACCCCATCCGGATTCC...GAACTGGGCATGCTGAGGTTGGGTGGTCAGGAGGTCAAGGCCACCCTGGGCTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR GCA 90 bp | GTAGCCCAGGGTGGCCTTGACCTCCTGACCACCCAACCTCAGCATGCCCAGTTCTGTGAAAGCAGCCAGTaGAAGAGGGGCAGCACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VAQGGLDLLTTQPQHAQFCESSQ*KRGSTP Trigger: GGGGGTGCTGCCCCTCTTGCACTGGCTGCTTTCACA...GAACTGGGCATGCTGAGGTTGGGTGGTCAGGAGGTCAAGGCCACCCTGGGCTAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | CCTGTGGTGGGTGTGGGTTCCCGACAGGTAAAACAGCACTGTCCTGGGCCCAGCTCTGGCAGACACAGGTaGTACAGTCGTCACCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: PVVGVGSRQVKQHCPGPSSGRHR*YSRHHP Trigger: GGGGTGGTGACGACTGTACCACCTGTGTCTGCCAGA...GCTGGGCCCAGGACAGTGCTGTTTTACCTGTCGGGAACCCACACCCACCACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235938.2 |
||
| CDS-3UTR CCA 90 bp | GTAGCCCAGGGTGGCCTTGACCTCCTGACCACCCAACCTCAGCATGCCCAGTTCAAAACAGCACTGTCCTaGGCCCAGCAGCCACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VAQGGLDLLTTQPQHAQFKTALS*AQQPLL Trigger: GAGGAGTGGCTGCTGGGCCCAGGACAGTGCTGTTTT...GAACTGGGCATGCTGAGGTTGGGTGGTCAGGAGGTCAAGGCCACCCTGGGCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | GTGTGCCAGGGCCACGGGGACCAACACAGACAATGGCAGGGGCCAAACAGAAACCTCACCTCTCCCAGCTaGCAGATGCACCGGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: VCQGHGDQHRQWQGPNRNLTSPS*QMHRVQ Trigger: CTGTACCCGGTGCATCTGCCAGCTGGGAGAGGTGAG...GTTTCTGTTTGGCCCCTGCCATTGTCTGTGTTGGTCCCCGTGGCCCTGGCACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | ACACCTGCTGGCCACTGTGGGTGCTACACACAAACACTTGGGCAGGTACCCTACCTGCAGGATGGCAGATaGGGCCAGAACGGCCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TPAGHCGCYTQTLGQVPYLQDGR*GQNGLR Trigger: CCGAAGGCCGTTCTGGCCCCATCTGCCATCCTGCAG...GTAGGGTACCTGCCCAAGTGTTTGTGTGTAGCACCCACAGTGGCCAGCAGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| 3UTR CAA 72 bp | GGCGACCAGATCTGTCCGATCGGAAACTCAACCCCGTaGTCATCCAGAGAGCAGCCTGTGGTGGGTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GDQICPIGNSTP*SSREQPVVGVG Trigger: ACCCACACCCACCACAGGCTGCTCTCTGGATGACAACGGGGTTGAGTTTCCGATCGGACAGATCTGGTCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235938.2 |
||
| CDS-3UTR GCA 90 bp | GTAGCCCAGGGTGGCCTTGACCTCCTGACCACCCAACCTCAGCATGCCCAGTTCCAGCAGACAGTTGCATaGCTGGCCCACATTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: VAQGGLDLLTTQPQHAQFQQTVA*LAHIHT Trigger: TGTGTGAATGTGGGCCAGGCATGCAACTGTCTGCTG...GAACTGGGCATGCTGAGGTTGGGTGGTCAGGAGGTCAAGGCCACCCTGGGCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR GCA 90 bp | GGGGACCAACACAGACAATGGCAGGGGCCAAACAGAAACATAGGTTCTCACAATCAGGGCAGGCCGGCCTaGCTCAGGGAGGAGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GDQHRQWQGPNRNIGSHNQGRPA*LREEQG Trigger: TCCCTGCTCCTCCCTGAGGCAGGCCGGCCTGCCCTG...ATTGTGAGAACCTATGTTTCTGTTTGGCCCCTGCCATTGTCTGTGTTGGTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | ACACCTGCTGGCCACTGTGGGTGCTACACACAAACACTTGGGCAGGTACCCTACGGATCCATGGGCTTCTaGGCAAGTGGCCCCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPAGHCGCYTQTLGQVPYGSMGF*ASGPLL Trigger: GAGCAAGGGGCCACTTGCCCAGAAGCCCATGGATCC...GTAGGGTACCTGCCCAAGTGTTTGTGTGTAGCACCCACAGTGGCCAGCAGGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR TCA 90 bp | GTGTGCCAGGGCCACGGGGACCAACACAGACAATGGCAGGGGCCAAACAGAAACAGTGGTGAGGGTCTCTaGGAGGTCAGCATTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VCQGHGDQHRQWQGPNRNSGEGL*EVSIGH Trigger: ATGACCAATGCTGACCTCTCAGAGACCCTCACCACT...GTTTCTGTTTGGCCCCTGCCATTGTCTGTGTTGGTCCCCGTGGCCCTGGCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | CACTGGCCTCTGACATCCCTACTTCACACCCTAAAGTACACTTGTTTTCTGAGCAGTGCCCGCTGCCCATaGAAGGGGCCCAGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HWPLTSLLHTLKYTCFLSSARCP*KGPSQG Trigger: GCCCTGGCTGGGCCCCTTCCATGGGCAGCGGGCACT...GCTCAGAAAACAAGTGTACTTTAGGGTGTGAAGTAGGGATGTCAGAGGCCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCCACTGTGGGTGCTACACACAAACACTTGGGCAGGTACCCTACTGTCCTAGGTGAGGATGAGGTCTaGGCTATGGGAGGGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LATVGATHKHLGRYPTVLGEDEV*AMGGLG Trigger: CCCAAGCCCTCCCATAGCCCAGACCTCATCCTCACC...TAGGACAGTAGGGTACCTGCCCAAGTGTTTGTGTGTAGCACCCACAGTGGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | GTGTGCCAGGGCCACGGGGACCAACACAGACAATGGCAGGGGCCAAACAGAAACTCAATTGTGGACTGTTaGGGAACAGGGTTGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VCQGHGDQHRQWQGPNRNSIVDC*GTGLGV Trigger: CACCCCCAACCCTGTTCCCCAACAGTCCACAATTGA...GTTTCTGTTTGGCCCCTGCCATTGTCTGTGTTGGTCCCCGTGGCCCTGGCACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR TCA 90 bp | TTCTTAGTCATCAATGACTCCCCACCACTACTACTCCTGACTCCCGTCCCCCTGACTCGGGCTACCTCCTaGCAGCCACCATGGTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: FLVINDSPPLLLLTPVPLTRATS*QPPWLQ Trigger: CTGTAACCATGGTGGCTGTCAGGAGGTAGCCCGAGT...CAGGGGGACGGGAGTCAGGAGTAGTAGTGGTGGGGAGTCATTGATGACTAAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR GCA 90 bp | TTCTTAGTCATCAATGACTCCCCACCACTACTACTCCTGACTCCCGTCCCCCTGAGGTGCACAGGAAGCTaGCCACAGTGTTGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLVINDSPPLLLLTPVPLRCTGS*PQCCGR Trigger: CCTGCCACAACACTGTGGGCAGCTTCCTGTGCACCT...CAGGGGGACGGGAGTCAGGAGTAGTAGTGGTGGGGAGTCATTGATGACTAAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | CACTGGCCTCTGACATCCCTACTTCACACCCTAAAGTACACTTGTTTTCTGAGCCCAGAGAGGCAGACGTaGGGCCCCAGACGACGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HWPLTSLLHTLKYTCFLSPERQT*GPRRRL Trigger: GAGACGTCGTCTGGGGCCCCACGTCTGCCTCTCTGG...GCTCAGAAAACAAGTGTACTTTAGGGTGTGAAGTAGGGATGTCAGAGGCCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | CCTGCCCCTGTGGCCAATGCTAAGATAATGGGGGAAGTTAAACATCTTTGCTTGGTATCCTGGGGCCCCTaGAGGAGGGCTGTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PAPVANAKIMGEVKHLCLVSWGP*RRAVSW Trigger: CCAGGACACAGCCCTCCTCCAGGGGCCCCAGGATAC...CAAGCAAAGATGTTTAACTTCCCCCATTATCTTAGCATTGGCCACAGGGGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | CACTGGCCTCTGACATCCCTACTTCACACCCTAAAGTACACTTGTTTTCTGAGCTCCAGTGGGGTATCCTaGGGCCCCTGGAGGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HWPLTSLLHTLKYTCFLSSSGVS*GPWRRA Trigger: AGCCCTCCTCCAGGGGCCCCAGGATACCCCACTGGA...GCTCAGAAAACAAGTGTACTTTAGGGTGTGAAGTAGGGATGTCAGAGGCCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR TCA 90 bp | CTGGCCACTGTGGGTGCTACACACAAACACTTGGGCAGGTACCCTACTGTCCTACACCATGGTTACAGGTaGGATCACAGCCATACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LATVGATHKHLGRYPTVLHHGYR*DHSHTP Trigger: GGGAGTATGGCTGTGATCTCACCTGTAACCATGGTG...TAGGACAGTAGGGTACCTGCCCAAGTGTTTGTGTGTAGCACCCACAGTGGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR TCA 90 bp | TTCTTAGTCATCAATGACTCCCCACCACTACTACTCCTGACTCCCGTCCCCCTGGTGTCTTGGCAGCTGTaGCGATCAGCAGACAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLVINDSPPLLLLTPVPLVSWQL*RSADSC Trigger: GCAACTGTCTGCTGATCGTCACAGCTGCCAAGACAC...CAGGGGGACGGGAGTCAGGAGTAGTAGTGGTGGGGAGTCATTGATGACTAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR TCA 90 bp | ACACCTGCTGGCCACTGTGGGTGCTACACACAAACACTTGGGCAGGTACCCTACTTCTGGAGTGACAGGTaGCAAAGGAGTCCCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TPAGHCGCYTQTLGQVPYFWSDR*QRSPWN Trigger: ATTCCAGGGACTCCTTTGTCACCTGTCACTCCAGAA...GTAGGGTACCTGCCCAAGTGTTTGTGTGTAGCACCCACAGTGGCCAGCAGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | TTGTTGTGGGAGGTAGTGGTGTTATTTTTGAAACAGGGTCTCTCTACAGAACCCCGGTTGCCGTGGAGGTaGAAGCCAGCGCGGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLWEVVVLFLKQGLSTEPRLPWR*KPARQE Trigger: CTCCTGCCGCGCTGGCTTCCACCTCCACGGCAACCG...GGGTTCTGTAGAGAGACCCTGTTTCAAAAATAACACCACTACCTCCCACAACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | ACACCTGCTGGCCACTGTGGGTGCTACACACAAACACTTGGGCAGGTACCCTACAGGAAACACAGAATCTaGGCAGGAGGGGTCAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: TPAGHCGCYTQTLGQVPYRKHRI*AGGVST Trigger: TGTACTGACCCCTCCTGCCCAGATTCTGTGTTTCCT...GTAGGGTACCTGCCCAAGTGTTTGTGTGTAGCACCCACAGTGGCCAGCAGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR TCA 90 bp | CACTGGCCTCTGACATCCCTACTTCACACCCTAAAGTACACTTGTTTTCTGAGCTTCAGGACCCCTAGGTaGGGAAGGGGTCCCTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: HWPLTSLLHTLKYTCFLSFRTPR*GRGPYS Trigger: GCTGTAGGGACCCCTTCCTCACCTAGGGGTCCTGAA...GCTCAGAAAACAAGTGTACTTTAGGGTGTGAAGTAGGGATGTCAGAGGCCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR TCA 90 bp | GGGGACCAACACAGACAATGGCAGGGGCCAAACAGAAACATAGGTTCTCACAATAGGGGTAGGTACAGGTaGTGGGACAGTCCACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GDQHRQWQGPNRNIGSHNRGRYR*WDSPQV Trigger: CACCTGTGGACTGTCCCATCACCTGTACCTACCCCT...ATTGTGAGAACCTATGTTTCTGTTTGGCCCCTGCCATTGTCTGTGTTGGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR GCA 90 bp | CACTGGCCTCTGACATCCCTACTTCACACCCTAAAGTACACTTGTTTTCTGAGCACTGTGGGGAAGCCTTaGAGGGACCAGGGGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: HWPLTSLLHTLKYTCFLSTVGKP*RDQGDT Trigger: AGTGTCCCCCTGGTCCCTGCAAGGCTTCCCCACAGT...GCTCAGAAAACAAGTGTACTTTAGGGTGTGAAGTAGGGATGTCAGAGGCCAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | ACCCTACTGTCCTATAACTTCCCTGCCTTTAGACCTATTAATCCCACTGTGACAGAGTGTCGGTTGCCGTaGAGGTGGAAGCCAGCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TLLSYNFPAFRPINPTVTECRLP*RWKPAR Trigger: CCGCGCTGGCTTCCACCTCCACGGCAACCGACACTC...TGTCACAGTGGGATTAATAGGTCTAAAGGCAGGGAAGTTATAGGACAGTAGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | ACACCTGCTGGCCACTGTGGGTGCTACACACAAACACTTGGGCAGGTACCCTACGACCTGGGTGGTAGATaGCTGACTGATTGTTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: TPAGHCGCYTQTLGQVPYDLGGR*LTDCSN Trigger: GTTAGAACAATCAGTCAGCCATCTACCACCCAGGTC...GTAGGGTACCTGCCCAAGTGTTTGTGTGTAGCACCCACAGTGGCCAGCAGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGTAGTGGTGTTATTTTTGAAACAGGGTCTCTCTACAGAACCCTGGCTATCGTTGGGGAACAGGGTTaGGGGTGTCCGGGAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGSGVIFETGSLYRTLAIVGEQG*GCPGEL Trigger: CAGCTCTCCCGGACACCCCCAACCCTGTTCCCCAAC...GATAGCCAGGGTTCTGTAGAGAGACCCTGTTTCAAAAATAACACCACTACCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR TCA 90 bp | AAACATAGGTTCTCACAATTCTGGAGACTGAAAGTCCAAAGCCAGGGGGTGTTTCGTCACCACCCCCACTaGACACAGCCCCATCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KHRFSQFWRLKVQSQGVFRHHPH*TQPHPC Trigger: ACACGGATGGGGCTGTGTTCAGTGGGGGTGGTGACG...AAACACCCCCTGGCTTTGGACTTTCAGTCTCCAGAATTGTGAGAACCTATGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR TCA 90 bp | TTCTTAGTCATCAATGACTCCCCACCACTACTACTCCTGACTCCCGTCCCCCTGTTGGCAAGTTCTCCATaGGGGGATGGTTGCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLVINDSPPLLLLTPVPLLASSP*GDGCCF Trigger: AAAGCAGCAACCATCCCCTCATGGAGAACTTGCCAA...CAGGGGGACGGGAGTCAGGAGTAGTAGTGGTGGGGAGTCATTGATGACTAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR TCA 90 bp | AAACATAGGTTCTCACAATTCTGGAGACTGAAAGTCCAAAGCCAGGGGGTGTTTCATGGGTCTTGTAGGTaGTGCCGATGGAGGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KHRFSQFWRLKVQSQGVFHGSCR*CRWRPR Trigger: CCGGGGCCTCCATCGGCATCACCTACAAGACCCATG...AAACACCCCCTGGCTTTGGACTTTCAGTCTCCAGAATTGTGAGAACCTATGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | TTCTTAGTCATCAATGACTCCCCACCACTACTACTCCTGACTCCCGTCCCCCTGCAGTGGGGAGGAACTTaGCACTGGAGTGGATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLVINDSPPLLLLTPVPLQWGGT*HWSGYQ Trigger: TTGATATCCACTCCAGTGCCAAGTTCCTCCCCACTG...CAGGGGGACGGGAGTCAGGAGTAGTAGTGGTGGGGAGTCATTGATGACTAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | TCACTGGCCTCTGACATCCCTACTTCACACCCTAAAGTACACTTGTTTTCTGAGTCCAAGGGTCCCCAGTaGGGAGGAACTTGGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLASDIPTSHPKVHLFSESKGPQ*GGTWHW Trigger: CCAGTGCCAAGTTCCTCCCCACTGGGGACCCTTGGA...CTCAGAAAACAAGTGTACTTTAGGGTGTGAAGTAGGGATGTCAGAGGCCAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | CCACGGGGACCAACACAGACAATGGCAGGGGCCAAACAGAAACATAGGTTCTCATTGGGGTGTCAATTGTaGACTGTTGGGGAACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PRGPTQTMAGAKQKHRFSLGCQL*TVGEQG Trigger: ACCCTGTTCCCCAACAGTCCACAATTGACACCCCAA...TGAGAACCTATGTTTCTGTTTGGCCCCTGCCATTGTCTGTGTTGGTCCCCGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR TCA 90 bp | CCTGCCCCTGTGGCCAATGCTAAGATAATGGGGGAAGTTAAACATCTTTGCTTGGGTCAGATCGAAGCCTaGAACCAGGTCTACAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PAPVANAKIMGEVKHLCLGQIEA*NQVYRC Trigger: GCACCTGTAGACCTGGTTTCAGGCTTCGATCTGACC...CAAGCAAAGATGTTTAACTTCCCCCATTATCTTAGCATTGGCCACAGGGGCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR GCA 90 bp | ACCCTACTGTCCTATAACTTCCCTGCCTTTAGACCTATTAATCCCACTGTGACAAGCCCAGCAGGCAGATaGAGCTCAGACAGGGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TLLSYNFPAFRPINPTVTSPAGR*SSDRGR Trigger: TCGACCCCTGTCTGAGCTGCATCTGCCTGCTGGGCT...TGTCACAGTGGGATTAATAGGTCTAAAGGCAGGGAAGTTATAGGACAGTAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR GCA 90 bp | CTGGCCTCTGACATCCCTACTTCACACCCTAAAGTACACTTGTTTTCTGAGCACGCTTCCCAAGAGATATaGCCTCTGGCTCCAACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LASDIPTSHPKVHLFSEHASQEI*PLAPTG Trigger: CCCTGTTGGAGCCAGAGGGCATATCTCTTGGGAAGC...GTGCTCAGAAAACAAGTGTACTTTAGGGTGTGAAGTAGGGATGTCAGAGGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCCTCTGACATCCCTACTTCACACCCTAAAGTACACTTGTTTTCTGAGCACGGCAGGAACAGACATTaGGAGCGATGCAGATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LASDIPTSHPKVHLFSEHGRNRH*ERCRCH Trigger: GTGGCATCTGCATCGCTCCCAATGTCTGTTCCTGCC...GTGCTCAGAAAACAAGTGTACTTTAGGGTGTGAAGTAGGGATGTCAGAGGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | AAACATAGGTTCTCACAATTCTGGAGACTGAAAGTCCAAAGCCAGGGGGTGTTTCCCTGCTCCCAGCTTTaGGCTTTCAGGACCCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KHRFSQFWRLKVQSQGVFPCSQL*AFRTPR Trigger: CCTAGGGGTCCTGAAAGCCCAAAGCTGGGAGCAGGG...AAACACCCCCTGGCTTTGGACTTTCAGTCTCCAGAATTGTGAGAACCTATGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | CACTGGCCTCTGACATCCCTACTTCACACCCTAAAGTACACTTGTTTTCTGAGCTGCCTGATTCATACGTaGCTCCCAGGTGCCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: HWPLTSLLHTLKYTCFLSCLIHT*LPGANR Trigger: CCTGTTGGCACCTGGGAGCCACGTATGAATCAGGCA...GCTCAGAAAACAAGTGTACTTTAGGGTGTGAAGTAGGGATGTCAGAGGCCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR TCA 90 bp | AAACATAGGTTCTCACAATTCTGGAGACTGAAAGTCCAAAGCCAGGGGGTGTTTGTAGGTGCAGCCTGCTaGACAGTCAGGACAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KHRFSQFWRLKVQSQGVFVGAAC*TVRTAL Trigger: CAGTGCTGTCCTGACTGTTCAGCAGGCTGCACCTAC...AAACACCCCCTGGCTTTGGACTTTCAGTCTCCAGAATTGTGAGAACCTATGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR GCA 90 bp | ACCCTACTGTCCTATAACTTCCCTGCCTTTAGACCTATTAATCCCACTGTGACATACAGGAGTGTCGGTTaGCGTGGAGGTGGAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLLSYNFPAFRPINPTVTYRSVG*RGGGSQ Trigger: CTGGCTTCCACCTCCACGGCAACCGACACTCCTGTA...TGTCACAGTGGGATTAATAGGTCTAAAGGCAGGGAAGTTATAGGACAGTAGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | AAACATAGGTTCTCACAATTCTGGAGACTGAAAGTCCAAAGCCAGGGGGTGTTTTCTGGCAGACACAGGTaGTACAGTCGTCACCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: KHRFSQFWRLKVQSQGVFSGRHR*YSRHHP Trigger: GGGGTGGTGACGACTGTACCACCTGTGTCTGCCAGA...AAACACCCCCTGGCTTTGGACTTTCAGTCTCCAGAATTGTGAGAACCTATGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCCTCTGACATCCCTACTTCACACCCTAAAGTACACTTGTTTTCTGAGCACGGCTATGGGAGGGCTTaGGGATGCAGACTGTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LASDIPTSHPKVHLFSEHGYGRA*GCRLYV Trigger: AACATACAGTCTGCATCCCCAAGCCCTCCCATAGCC...GTGCTCAGAAAACAAGTGTACTTTAGGGTGTGAAGTAGGGATGTCAGAGGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR TCA 90 bp | CCTGCCCCTGTGGCCAATGCTAAGATAATGGGGGAAGTTAAACATCTTTGCTTGTCTGTGTTCACGCAGTaGCCCTCACAAGATGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PAPVANAKIMGEVKHLCLSVFTQ*PSQDEL Trigger: AAGCTCATCTTGTGAGGGTCACTGCGTGAACACAGA...CAAGCAAAGATGTTTAACTTCCCCCATTATCTTAGCATTGGCCACAGGGGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR GCA 90 bp | GGAGGTAGTGGTGTTATTTTTGAAACAGGGTCTCTCTACAGAACCCTGGCTATCCTGTTCTTACATCTCTaGTGGCAGGGTGTTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGSGVIFETGSLYRTLAILFLHL*WQGVPR Trigger: CCTGGGAACACCCTGCCAGCAGAGATGTAAGAACAG...GATAGCCAGGGTTCTGTAGAGAGACCCTGTTTCAAAAATAACACCACTACCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGTATGAGCCACCATGCCTTAACTAACATTACTTTACAAAAGATAAAGGTCGTCGGGGCTGCAGGATaGCAGATGGGGCCAGAACGG | + |
|
Preference number: 4 (lower is better) Translates to: TGMSHHALTNITLQKIKVVGAAG*QMGPER Trigger: CCGTTCTGGCCCCATCTGCCATCCTGCAGCCCCGAC...GACCTTTATCTTTTGTAAAGTAATGTTAGTTAAGGCATGGTGGCTCATACCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | AAACATAGGTTCTCACAATTCTGGAGACTGAAAGTCCAAAGCCAGGGGGTGTTTCGTTCCGTGCAGCTTTaGCAAGTTCTCCATGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KHRFSQFWRLKVQSQGVFRSVQL*QVLHEG Trigger: CCCCTCATGGAGAACTTGCCAAAGCTGCACGGAACG...AAACACCCCCTGGCTTTGGACTTTCAGTCTCCAGAATTGTGAGAACCTATGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR TCA 90 bp | GGAGGTAGTGGTGTTATTTTTGAAACAGGGTCTCTCTACAGAACCCTGGCTATCAAGAGCTTTCTGGAGTaGCAGGTGACAAAGGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGSGVIFETGSLYRTLAIKSFLE*QVTKES Trigger: GGACTCCTTTGTCACCTGTCACTCCAGAAAGCTCTT...GATAGCCAGGGTTCTGTAGAGAGACCCTGTTTCAAAAATAACACCACTACCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR TCA 90 bp | CACTGGCCTCTGACATCCCTACTTCACACCCTAAAGTACACTTGTTTTCTGAGCCTGAGTCCCAAAGGTTaGAGAAGAGCTTTCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HWPLTSLLHTLKYTCFLSLSPKG*RRAFWS Trigger: ACTCCAGAAAGCTCTTCTTCAACCTTTGGGACTCAG...GCTCAGAAAACAAGTGTACTTTAGGGTGTGAAGTAGGGATGTCAGAGGCCAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR GCA 90 bp | TCACTGGCCTCTGACATCCCTACTTCACACCCTAAAGTACACTTGTTTTCTGAGGTTCTTAAAAGCCTCTaGAGGAGGTGGACCATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLASDIPTSHPKVHLFSEVLKSL*RRWTMG Trigger: ACCCATGGTCCACCTCCTGCAGAGGCTTTTAAGAAC...CTCAGAAAACAAGTGTACTTTAGGGTGTGAAGTAGGGATGTCAGAGGCCAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | ACCCTACTGTCCTATAACTTCCCTGCCTTTAGACCTATTAATCCCACTGTGACATTCTTACATCTCTGCTaGCAGGGTGTTCCCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLLSYNFPAFRPINPTVTFLHLC*QGVPRH Trigger: GTGCCTGGGAACACCCTGCCAGCAGAGATGTAAGAA...TGTCACAGTGGGATTAATAGGTCTAAAGGCAGGGAAGTTATAGGACAGTAGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | AAACATAGGTTCTCACAATTCTGGAGACTGAAAGTCCAAAGCCAGGGGGTGTTTCTCCAGCTCTGGACATaGTGTGAAGGAGCACTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: KHRFSQFWRLKVQSQGVFLQLWT*CEGALY Trigger: GTAGAGTGCTCCTTCACACCATGTCCAGAGCTGGAG...AAACACCCCCTGGCTTTGGACTTTCAGTCTCCAGAATTGTGAGAACCTATGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR GCA 90 bp | TTGTTGTGGGAGGTAGTGGTGTTATTTTTGAAACAGGGTCTCTCTACAGAACCCTTCTACCTGTGTAGGTaGAGCCTGCTGAACAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLWEVVVLFLKQGLSTEPFYLCR*SLLNSQ Trigger: CTGACTGTTCAGCAGGCTGCACCTACACAGGTAGAA...GGGTTCTGTAGAGAGACCCTGTTTCAAAAATAACACCACTACCTCCCACAACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | CACTGGCCTCTGACATCCCTACTTCACACCCTAAAGTACACTTGTTTTCTGAGCAACTTGGCACTGGAGTaGATATCAACTGTGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HWPLTSLLHTLKYTCFLSNLALE*ISTVWE Trigger: TTCCCACACAGTTGATATCCACTCCAGTGCCAAGTT...GCTCAGAAAACAAGTGTACTTTAGGGTGTGAAGTAGGGATGTCAGAGGCCAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | TCACTGGCCTCTGACATCCCTACTTCACACCCTAAAGTACACTTGTTTTCTGAGGGAGGAACTTGGCACTaGAGTGGATATCAACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLASDIPTSHPKVHLFSEGGTWH*SGYQLC Trigger: ACACAGTTGATATCCACTCCAGTGCCAAGTTCCTCC...CTCAGAAAACAAGTGTACTTTAGGGTGTGAAGTAGGGATGTCAGAGGCCAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR TCA 90 bp | TTGTTGTGGGAGGTAGTGGTGTTATTTTTGAAACAGGGTCTCTCTACAGAACCCGTCAGCATTGGTCATTaGAGGTGTTTCTGCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLWEVVVLFLKQGLSTEPVSIGH*RCFCLS Trigger: ACTGAGGCAGAAACACCTTCAATGACCAATGCTGAC...GGGTTCTGTAGAGAGACCCTGTTTCAAAAATAACACCACTACCTCCCACAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR TCA 90 bp | ACAGGTATGAGCCACCATGCCTTAACTAACATTACTTTACAAAAGATAAAGGTCAGCTCGAGGAAGTGGTaGGGGTCTCTGAGAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGMSHHALTNITLQKIKVSSRKW*GSLRGQ Trigger: CTGACCTCTCAGAGACCCTCACCACTTCCTCGAGCT...GACCTTTATCTTTTGTAAAGTAATGTTAGTTAAGGCATGGTGGCTCATACCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGTAGTGGTGTTATTTTTGAAACAGGGTCTCTCTACAGAACCCTGGCTATCTGGATATCAACTGTGTaGGAAAGAATGTGGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGSGVIFETGSLYRTLAIWISTV*ERMWVG Trigger: TCCTACCCACATTCTTTCCCACACAGTTGATATCCA...GATAGCCAGGGTTCTGTAGAGAGACCCTGTTTCAAAAATAACACCACTACCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | TTGTTGTGGGAGGTAGTGGTGTTATTTTTGAAACAGGGTCTCTCTACAGAACCCAGAGTTCTCCTTCTTTaGGGTGTCAATTGTGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: LLWEVVVLFLKQGLSTEPRVLLL*GVNCGL Trigger: CAGTCCACAATTGACACCCCAAAGAAGGAGAACTCT...GGGTTCTGTAGAGAGACCCTGTTTCAAAAATAACACCACTACCTCCCACAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR GCA 90 bp | CCTGCCCCTGTGGCCAATGCTAAGATAATGGGGGAAGTTAAACATCTTTGCTTGACTTATAGCTACCAATaGTGTTCTTACATCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PAPVANAKIMGEVKHLCLTYSYQ*CSYISA Trigger: AGCAGAGATGTAAGAACAGCATTGGTAGCTATAAGT...CAAGCAAAGATGTTTAACTTCCCCCATTATCTTAGCATTGGCCACAGGGGCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CCA 90 bp | TTGTTGTGGGAGGTAGTGGTGTTATTTTTGAAACAGGGTCTCTCTACAGAACCCGAAATAGCATCTCCCTaGAACACAAGTACAGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: LLWEVVVLFLKQGLSTEPEIASP*NTSTAI Trigger: GATTGCTGTACTTGTGTTCCAGGGAGATGCTATTTC...GGGTTCTGTAGAGAGACCCTGTTTCAAAAATAACACCACTACCTCCCACAACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 90 bp | CTGTCCTGGGCCCAGCAGCCACTCCTCTCGAGGGCACTCCAGCTCTaGACATGGTGTGAAGGAGCACTCTACCTCCCCATTCTGGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSWAQQPLLSRALQL*TWCEGALYLPILAD Trigger: GTCTGCCAGAATGGGGAGGTAGAGTGCTCCTTCACACCATGTCCAGAGCTGGAGTGCCCTCGAGAGGAGTGGCTGCTGGGCCCAGGACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CAA 90 bp | CAGGGTGGCCTTGACCTCCTGACCACCCAACCTCAGCATGCCCAGTTCTGCAGTTGGGCAAGTGGCCCCTaGCTCTCCATCCTGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QGGLDLLTTQPQHAQFCSWASGP*LSILAG Trigger: TCCTGCCAGGATGGAGAGCAAGGGGCCACTTGCCCA...ACTGCAGAACTGGGCATGCTGAGGTTGGGTGGTCAGGAGGTCAAGGCCACCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS TCA 90 bp | CGCAGAGTAGTGCCCTGGCGCCTTCCTCCCGGTATAGCCTCGGGCTaGAGACCCCAGCAACGGGATCAAGATGTAGGCGACATGGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: RRVVPWRLPPGIASG*RPQQRDQDVGDMEQ Trigger: TTGCTCCATGTCGCCTACATCTTGATCCCGTTGCTGGGGTCTTCAGCCCGAGGCTATACCGGGAGGAAGGCGCCAGGGCACTACTCTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS TCA 90 bp | CTGGCACAAGCACTGAGAACATCCGGGCTGGTTCCAGCGGCTGCCTaGTTCATACGTGGCTCCCAGGTGCCAACAGGAAGAGGACCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LAQALRTSGLVPAAA*FIRGSQVPTGRGPC Trigger: GCAGGGTCCTCTTCCTGTTGGCACCTGGGAGCCACGTATGAATCAGGCAGCCGCTGGAACCAGCCCGGATGTTCTCAGTGCTTGTGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 90 bp | TGGGCCCAGCAGCCACTCCTCTCGAGGGCACTCCAGCTCTGGACATaGTGTGAAGGAGCACTCTACCTCCCCATTCTGGCAGACACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: WAQQPLLSRALQLWT*CEGALYLPILADTG Trigger: ACCTGTGTCTGCCAGAATGGGGAGGTAGAGTGCTCCTTCACACCATGTCCAGAGCTGGAGTGCCCTCGAGAGGAGTGGCTGCTGGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS TCA 90 bp | CAGGGCATACTCGGGCTACCTCCTGACAGCCACCATGGTTACAGGTaGGATCACAGCCATACTCCCCGCAGGATCCATGGGCTTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QGILGLPPDSHHGYR*DHSHTPRRIHGLLG Trigger: GCCCAGAAGCCCATGGATCCTGCGGGGAGTATGGCTGTGATCTCACCTGTAACCATGGTGGCTGTCAGGAGGTAGCCCGAGTATGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS TCA 90 bp | CCAGCAGCCACTCCTCTCGAGGGCACTCCAGCTCTGGACATGGTGTaGAGGAGCACTCTACCTCCCCATTCTGGCAGACACAGGTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PAATPLEGTPALDMV*RSTLPPHSGRHRWY Trigger: GTACCACCTGTGTCTGCCAGAATGGGGAGGTAGAGTGCTCCTTCACACCATGTCCAGAGCTGGAGTGCCCTCGAGAGGAGTGGCTGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS GCA 90 bp | CATCCTGGCACAAGCACTGAGAACATCCGGGCTGGTTCCAGCGGCTaGCTGATTCATACGTGGCTCCCAGGTGCCAACAGGAAGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: HPGTSTENIRAGSSG*LIHTWLPGANRKRT Trigger: GGTCCTCTTCCTGTTGGCACCTGGGAGCCACGTATGAATCAGGCAGCCGCTGGAACCAGCCCGGATGTTCTCAGTGCTTGTGCCAGGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 90 bp | CAGGATCCATGGGCTTCTGGGCAAGTGGCCCCTTGCTCTCCATCCTaGCAGGAACAGACATTGGGAGCGATGCAGATGCCACTCCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: QDPWASGQVAPCSPS*QEQTLGAMQMPLPQ Trigger: CTGTGGGAGTGGCATCTGCATCGCTCCCAATGTCTGTTCCTGCCAGGATGGAGAGCAAGGGGCCACTTGCCCAGAAGCCCATGGATCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 90 bp | GATCACAGCCATACTCCCCGCAGGATCCATGGGCTTCTGGGCAAGTaGCCCCTTGCTCTCCATCCTGGCAGGAACAGACATTGGGAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: DHSHTPRRIHGLLGK*PLALHPGRNRHWER Trigger: TCGCTCCCAATGTCTGTTCCTGCCAGGATGGAGAGCAAGGGGCCACTTGCCCAGAAGCCCATGGATCCTGCGGGGAGTATGGCTGTGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 90 bp | ACTGAGAACATCCGGGCTGGTTCCAGCGGCTGCCTGATTCATACGTaGCTCCCAGGTGCCAACAGGAAGAGGACCCTGCTCCCAGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TENIRAGSSGCLIHT*LPGANRKRTLLPAL Trigger: CAAAGCTGGGAGCAGGGTCCTCTTCCTGTTGGCACCTGGGAGCCACGTATGAATCAGGCAGCCGCTGGAACCAGCCCGGATGTTCTCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 90 bp | CCATGGTTACAGGTGAGATCACAGCCATACTCCCCGCAGGATCCATaGGCTTCTGGGCAAGTGGCCCCTTGCTCTCCATCCTGGCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PWLQVRSQPYSPQDP*ASGQVAPCSPSWQE Trigger: TTCCTGCCAGGATGGAGAGCAAGGGGCCACTTGCCCAGAAGCCCATGGATCCTGCGGGGAGTATGGCTGTGATCTCACCTGTAACCATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS GCA 90 bp | CGTGGAGGTGGAAGCCAGCGCGGCAGGAGCACTTATAGCTACCAATaGTGTTCTTACATCTCTGCTGGCAGGGTGTTCCCAGGCACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: RGGGSQRGRSTYSYQ*CSYISAGRVFPGTR Trigger: ACGAGTGCCTGGGAACACCCTGCCAGCAGAGATGTAAGAACAGCATTGGTAGCTATAAGTGCTCCTGCCGCGCTGGCTTCCACCTCCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 90 bp | GCCCACAGTGTTGTGGCAGGTGTGGTGACAGACTCTCCTCTCTTGTaGCCGCCGACACTCGTTGACATCTATACAGGAGTGTCGGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AHSVVAGVVTDSPLL*PPTLVDIYTGVSVA Trigger: GGCAACCGACACTCCTGTATAGATGTCAACGAGTGTCGGCGGCCACAAGAGAGGAGAGTCTGTCACCACACCTGCCACAACACTGTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS GCA 90 bp | ACTCGTCAGTGTCTTGGCAGCTGTGACGATCAGCAGACAGTTGCATaGCTGGCCCACATTCACACACGAAGCCACCTTCTGTGTTCACGC | + |
|
Preference number: 5 (lower is better) Translates to: TRQCLGSCDDQQTVA*LAHIHTRSHLLCSR Trigger: GCGTGAACACAGAAGGTGGCTTCGTGTGTGAATGTGGGCCAGGCATGCAACTGTCTGCTGATCGTCACAGCTGCCAAGACACTGACGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS GCA 90 bp | GGAGCTACAGTTGACAGGGACTTCAGTGTCTCCACGGGCGTTCCGTaGAGCTTTGGCAAGTTCTCCATGAGGGGATGGTTGCTGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GATVDRDFSVSTGVP*SFGKFSMRGWLLLF Trigger: GAAAAGCAGCAACCATCCCCTCATGGAGAACTTGCCAAAGCTGCACGGAACGCCCGTGGAGACACTGAAGTCCCTGTCAACTGTAGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 90 bp | GTCAGTGTCTTGGCAGCTGTGACGATCAGCAGACAGTTGCATGCCTaGCCCACATTCACACACGAAGCCACCTTCTGTGTTCACGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VSVLAAVTISRQLHA*PTFTHEATFCVHAV Trigger: CACTGCGTGAACACAGAAGGTGGCTTCGTGTGTGAATGTGGGCCAGGCATGCAACTGTCTGCTGATCGTCACAGCTGCCAAGACACTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 90 bp | GACTGTATGTTAGACAGGTTTGTTCTTAAAAGCCTCTGCAGGAGGTaGACCATGGGTCTTGTAGGTGATGCCGATGGAGGCCCCGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DCMLDRFVLKSLCRR*TMGLVGDADGGPGQ Trigger: CTGCCCGGGGCCTCCATCGGCATCACCTACAAGACCCATGGTCCACCTCCTGCAGAGGCTTTTAAGAACAAACCTGTCTAACATACAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CAA 90 bp | TTCTTAGTCATCAATGACTCCCCACCACTACTACTCCTGACTCCCGTCCCCCTGTGGCAGGAACAGACATaGGGAGCGATGCAGATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLVINDSPPLLLLTPVPLWQEQT*GAMQMP Trigger: TGGCATCTGCATCGCTCCCAATGTCTGTTCCTGCCA...CAGGGGGACGGGAGTCAGGAGTAGTAGTGGTGGGGAGTCATTGATGACTAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CAA 90 bp | TTCTTAGTCATCAATGACTCCCCACCACTACTACTCCTGACTCCCGTCCCCCTGGGAAACTCAACCCCGTaGTCATCCAGAGAGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FLVINDSPPLLLLTPVPLGNSTP*SSREQP Trigger: AGGCTGCTCTCTGGATGACAACGGGGTTGAGTTTCC...CAGGGGGACGGGAGTCAGGAGTAGTAGTGGTGGGGAGTCATTGATGACTAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS TCA 90 bp | CCTGGCCCACATTCACACACGAAGCCACCTTCTGTGTTCACGCAGTaGCCCTCACAAGATGAGCTTAAACACTCGTCAATGTCCGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: PGPHSHTKPPSVFTQ*PSQDELKHSSMSAH Trigger: GTGTGCGGACATTGACGAGTGTTTAAGCTCATCTTGTGAGGGTCACTGCGTGAACACAGAAGGTGGCTTCGTGTGTGAATGTGGGCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS TCA 90 bp | CTCCCAGCTGGCAGATGCACCGGGTACAGGGCTCATCATCCAAGGTaGACACCTGACCATTCACTACCTTTCTCCCTTCGAAGTTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LPAGRCTGYRAHHPR*TPDHSLPFSLRSYS Trigger: ACTGTAACTTCGAAGGGAGAAAGGTAGTGAATGGTCAGGTGTTCACCTTGGATGATGAGCCCTGTACCCGGTGCATCTGCCAGCTGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CAA 90 bp | CTGGCCACTGTGGGTGCTACACACAAACACTTGGGCAGGTACCCTACTGTCCTAGGTCAGCATTGGTCATaGAAGGTGTTTCTGCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LATVGATHKHLGRYPTVLGQHWS*KVFLPQ Trigger: CTGAGGCAGAAACACCTTCAATGACCAATGCTGACC...TAGGACAGTAGGGTACCTGCCCAAGTGTTTGTGTGTAGCACCCACAGTGGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS TCA 90 bp | TGGCAGATGCACCGGGTACAGGGCTCATCATCCAAGGTGAACACCTaGCCATTCACTACCTTTCTCCCTTCGAAGTTACAGTCGTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: WQMHRVQGSSSKVNT*PFTTFLPSKLQSWH Trigger: ATGCCACGACTGTAACTTCGAAGGGAGAAAGGTAGTGAATGGTCAGGTGTTCACCTTGGATGATGAGCCCTGTACCCGGTGCATCTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS GCA 90 bp | ATCTCCCTGGAACACAAGTACAGCAATCTGACTGTGGGGAAGCCTTaGAGGGACCAGGGGGACACTCGGGAGAGATACAAGAAACATTTC | + |
|
Preference number: 5 (lower is better) Translates to: ISLEHKYSNLTVGKP*RDQGDTRERYKKHF Trigger: GAAATGTTTCTTGTATCTCTCCCGAGTGTCCCCCTGGTCCCTGCAAGGCTTCCCCACAGTCAGATTGCTGTACTTGTGTTCCAGGGAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CAA 90 bp | GGGGACCAACACAGACAATGGCAGGGGCCAAACAGAAACATAGGTTCTCACAATGTCAATTGTGGACTGTaGGGGAACAGGGTTGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GDQHRQWQGPNRNIGSHNVNCGL*GNRVGG Trigger: ACCCCCAACCCTGTTCCCCAACAGTCCACAATTGAC...ATTGTGAGAACCTATGTTTCTGTTTGGCCCCTGCCATTGTCTGTGTTGGTCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CAA 90 bp | GGAGGTAGTGGTGTTATTTTTGAAACAGGGTCTCTCTACAGAACCCTGGCTATCGCACTCGTCAGTGTCTaGGCAGCTGTGACGATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGSGVIFETGSLYRTLAIALVSV*AAVTIS Trigger: GCTGATCGTCACAGCTGCCAAGACACTGACGAGTGC...GATAGCCAGGGTTCTGTAGAGAGACCCTGTTTCAAAAATAACACCACTACCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CAA 90 bp | AAACATAGGTTCTCACAATTCTGGAGACTGAAAGTCCAAAGCCAGGGGGTGTTTACGCAGTCTGTCCTCTaGCAGCTCACAGAGCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KHRFSQFWRLKVQSQGVFTQSVL*QLTEPS Trigger: AGACGGCTCTGTGAGCTGCAAGAGGACAGACTGCGT...AAACACCCCCTGGCTTTGGACTTTCAGTCTCCAGAATTGTGAGAACCTATGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CAA 90 bp | TTGTTGTGGGAGGTAGTGGTGTTATTTTTGAAACAGGGTCTCTCTACAGAACCCGGGCTATGGGAGGGCTaGGGGATGCAGACTGTATGT | + |
|
Preference number: 5 (lower is better) Translates to: LLWEVVVLFLKQGLSTEPGLWEG*GMQTVC Trigger: ACATACAGTCTGCATCCCCAAGCCCTCCCATAGCCC...GGGTTCTGTAGAGAGACCCTGTTTCAAAAATAACACCACTACCTCCCACAACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS-3UTR CAA 90 bp | TTGTTGTGGGAGGTAGTGGTGTTATTTTTGAAACAGGGTCTCTCTACAGAACCCTCTGAGTCCCAAAGGTaGAAGAAGAGCTTTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLWEVVVLFLKQGLSTEPSESQR*KKSFLE Trigger: CTCCAGAAAGCTCTTCTTCAACCTTTGGGACTCAGA...GGGTTCTGTAGAGAGACCCTGTTTCAAAAATAACACCACTACCTCCCACAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS TCA 72 bp | GTGCCCTGGCGCCTTCCTCCCGGTATAGCCTCGGGCTaGAGACCCCAGCAACGGGATCAAGATGTAGGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: VPWRLPPGIASG*RPQQRDQDVGD Trigger: GTCGCCTACATCTTGATCCCGTTGCTGGGGTCTTCAGCCCGAGGCTATACCGGGAGGAAGGCGCCAGGGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS GCA 72 bp | CCTGCCTCAGGGAGGAGCAGGGACATCTTAGCAGGATaGTGTCGGGGCTGCAGGATGGCAGATGGGGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PASGRSRDILAG*CRGCRMADGAR Trigger: TCTGGCCCCATCTGCCATCCTGCAGCCCCGACAGCATCCTGCTAAGATGTCCCTGCTCCTCCCTGAGGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CAA 72 bp | GGTGATGCCGATGGAGGCCCCGGGCAGGAGCTACAGTaGACAGGGACTTCAGTGTCTCCACGGGCGTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: GDADGGPGQELQ*TGTSVSPRAFR Trigger: ACGGAACGCCCGTGGAGACACTGAAGTCCCTGTCAACTGTAGCTCCTGCCCGGGGCCTCCATCGGCATCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS TCA 72 bp | GGCAGACACAGGTGGTACAGTCGTCACCACCCCCACTaGACACAGCCCCATCCGTGTACCACCGGCCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: GRHRWYSRHHPH*TQPHPCTTGHG Trigger: TCCATGGCCGGTGGTACACGGATGGGGCTGTGTTCAGTGGGGGTGGTGACGACTGTACCACCTGTGTCTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055115.9 ENSMUST00000235938.2 |
||
| CDS CCA 72 bp | ATCCGGGCTGGTTCCAGCGGCTGCCTGATTCATACGTaGCTCCCAGGTGCCAACAGGAAGAGGACCCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: IRAGSSGCLIHT*LPGANRKRTLL Trigger: GAGCAGGGTCCTCTTCCTGTTGGCACCTGGGAGCCACGTATGAATCAGGCAGCCGCTGGAACCAGCCCGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CAA 90 bp | GGTCTTGTAGGTGATGCCGATGGAGGCCCCGGGCAGGAGCTACAGTaGACAGGGACTTCAGTGTCTCCACGGGCGTTCCGTGCAGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: GLVGDADGGPGQELQ*TGTSVSPRAFRAAL Trigger: CAAAGCTGCACGGAACGCCCGTGGAGACACTGAAGTCCCTGTCAACTGTAGCTCCTGCCCGGGGCCTCCATCGGCATCACCTACAAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS TCA 72 bp | CCTCCACAGGTCACCTCTCCATCCTGGCACAAGCACTaGGAACATCCGGGCTGGTTCCAGCGGCTGCCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: PPQVTSPSWHKH*EHPGWFQRLPD Trigger: ATCAGGCAGCCGCTGGAACCAGCCCGGATGTTCTCAGTGCTTGTGCCAGGATGGAGAGGTGACCTGTGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS TCA 72 bp | GGGTTGGGGGTGTCCGGGAGAGCTGCAGATAGCCTTTaGGAGCTCGAGGAAGTGGTGAGGGTCTCTGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GLGVSGRAADSL*ELEEVVRVSER Trigger: CCTCTCAGAGACCCTCACCACTTCCTCGAGCTCTCAAAGGCTATCTGCAGCTCTCCCGGACACCCCCAACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 72 bp | CAGGTGAGATCACAGCCATACTCCCCGCAGGATCCATaGGCTTCTGGGCAAGTGGCCCCTTGCTCTCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: QVRSQPYSPQDP*ASGQVAPCSPS Trigger: GGATGGAGAGCAAGGGGCCACTTGCCCAGAAGCCCATGGATCCTGCGGGGAGTATGGCTGTGATCTCACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 72 bp | GCCCAGCAGCCACTCCTCTCGAGGGCACTCCAGCTCTaGACATGGTGTGAAGGAGCACTCTACCTCCCCATT | + |
|
Preference number: 6 (lower is better) Translates to: AQQPLLSRALQL*TWCEGALYLPI Trigger: AATGGGGAGGTAGAGTGCTCCTTCACACCATGTCCAGAGCTGGAGTGCCCTCGAGAGGAGTGGCTGCTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CAA 90 bp | GCCATACTCCCCGCAGGATCCATGGGCTTCTGGGCAAGTGGCCCCTaGCTCTCCATCCTGGCAGGAACAGACATTGGGAGCGATGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: AILPAGSMGFWASGP*LSILAGTDIGSDAD Trigger: ATCTGCATCGCTCCCAATGTCTGTTCCTGCCAGGATGGAGAGCAAGGGGCCACTTGCCCAGAAGCCCATGGATCCTGCGGGGAGTATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS TCA 72 bp | CTCGGGCTACCTCCTGACAGCCACCATGGTTACAGGTaGGATCACAGCCATACTCCCCGCAGGATCCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: LGLPPDSHHGYR*DHSHTPRRIHG Trigger: CCCATGGATCCTGCGGGGAGTATGGCTGTGATCTCACCTGTAACCATGGTGGCTGTCAGGAGGTAGCCCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS TCA 72 bp | GCACTGAGAACATCCGGGCTGGTTCCAGCGGCTGCCTaGTTCATACGTGGCTCCCAGGTGCCAACAGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: ALRTSGLVPAAA*FIRGSQVPTGR Trigger: TCTTCCTGTTGGCACCTGGGAGCCACGTATGAATCAGGCAGCCGCTGGAACCAGCCCGGATGTTCTCAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS GCA 72 bp | ACAAGCACTGAGAACATCCGGGCTGGTTCCAGCGGCTaGCTGATTCATACGTGGCTCCCAGGTGCCAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: TSTENIRAGSSG*LIHTWLPGANR Trigger: CCTGTTGGCACCTGGGAGCCACGTATGAATCAGGCAGCCGCTGGAACCAGCCCGGATGTTCTCAGTGCTTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 72 bp | TGGCCCCTTGCTCTCCATCCTGGCAGGAACAGACATTaGGAGCGATGCAGATGCCACTCCCACAGCCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: WPLALHPGRNRH*ERCRCHSHSQR Trigger: CCTTTGGCTGTGGGAGTGGCATCTGCATCGCTCCCAATGTCTGTTCCTGCCAGGATGGAGAGCAAGGGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 72 bp | TGGGCTTCTGGGCAAGTGGCCCCTTGCTCTCCATCCTaGCAGGAACAGACATTGGGAGCGATGCAGATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: WASGQVAPCSPS*QEQTLGAMQMP Trigger: TGGCATCTGCATCGCTCCCAATGTCTGTTCCTGCCAGGATGGAGAGCAAGGGGCCACTTGCCCAGAAGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 72 bp | CATACTCCCCGCAGGATCCATGGGCTTCTGGGCAAGTaGCCCCTTGCTCTCCATCCTGGCAGGAACAGACAT | + |
|
Preference number: 6 (lower is better) Translates to: HTPRRIHGLLGK*PLALHPGRNRH Trigger: ATGTCTGTTCCTGCCAGGATGGAGAGCAAGGGGCCACTTGCCCAGAAGCCCATGGATCCTGCGGGGAGTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 72 bp | CAGCCACTCCTCTCGAGGGCACTCCAGCTCTGGACATaGTGTGAAGGAGCACTCTACCTCCCCATTCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: QPLLSRALQLWT*CEGALYLPILA Trigger: TGCCAGAATGGGGAGGTAGAGTGCTCCTTCACACCATGTCCAGAGCTGGAGTGCCCTCGAGAGGAGTGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 72 bp | ATGCCCTCTGGCTCCAACAGGGGTGAGGATGAGGTCTaGGCTATGGGAGGGCTTGGGGATGCAGACTGTATG | + |
|
Preference number: 6 (lower is better) Translates to: MPSGSNRGEDEV*AMGGLGDADCM Trigger: CATACAGTCTGCATCCCCAAGCCCTCCCATAGCCCAGACCTCATCCTCACCCCTGTTGGAGCCAGAGGGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CAA 72 bp | GTGGCCCCTTGCTCTCCATCCTGGCAGGAACAGACATaGGGAGCGATGCAGATGCCACTCCCACAGCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: VAPCSPSWQEQT*GAMQMPLPQPK Trigger: CTTTGGCTGTGGGAGTGGCATCTGCATCGCTCCCAATGTCTGTTCCTGCCAGGATGGAGAGCAAGGGGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CAA 90 bp | CTTCTAGAGGAAACACAGAATCTGGGCAGGAGGGGTCAGTACAGATaGGCCGGCAGGGTACCGTCTCACAGCTCACCTCTCCCAGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLEETQNLGRRGQYR*AGRVPSHSSPLPAG Trigger: GCCAGCTGGGAGAGGTGAGCTGTGAGACGGTACCCTGCCGGCCAATCTGTACTGACCCCTCCTGCCCAGATTCTGTGTTTCCTCTAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CAA 90 bp | CTTACATCTCTGCTGGCAGGGTGTTCCCAGGCACTCGTCAGTGTCTaGGCAGCTGTGACGATCAGCAGACAGTTGCATGCCTGGCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: LTSLLAGCSQALVSV*AAVTISRQLHAWPT Trigger: TGTGGGCCAGGCATGCAACTGTCTGCTGATCGTCACAGCTGCCAAGACACTGACGAGTGCCTGGGAACACCCTGCCAGCAGAGATGTAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS TCA 72 bp | GGTGTTCCCAGGCACTCGTCAGTGTCTTGGCAGCTGTaGCGATCAGCAGACAGTTGCATGCCTGGCCCACAT | + |
|
Preference number: 6 (lower is better) Translates to: GVPRHSSVSWQL*RSADSCMPGPH Trigger: ATGTGGGCCAGGCATGCAACTGTCTGCTGATCGTCACAGCTGCCAAGACACTGACGAGTGCCTGGGAACACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS TCA 72 bp | ACTCCTCTCGAGGGCACTCCAGCTCTGGACATGGTGTaGAGGAGCACTCTACCTCCCCATTCTGGCAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: TPLEGTPALDMV*RSTLPPHSGRH Trigger: GTGTCTGCCAGAATGGGGAGGTAGAGTGCTCCTTCACACCATGTCCAGAGCTGGAGTGCCCTCGAGAGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 72 bp | AAACACAGAATCTGGGCAGGAGGGGTCAGTACAGATTaGCCGGCAGGGTACCGTCTCACAGCTCACCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KHRIWAGGVSTD*PAGYRLTAHLS Trigger: GGAGAGGTGAGCTGTGAGACGGTACCCTGCCGGCCAATCTGTACTGACCCCTCCTGCCCAGATTCTGTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CAA 90 bp | GCTGCCCACAGTGTTGTGGCAGGTGTGGTGACAGACTCTCCTCTCTaGTGGCCGCCGACACTCGTTGACATCTATACAGGAGTGTCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: AAHSVVAGVVTDSPL*WPPTLVDIYTGVSV Trigger: AACCGACACTCCTGTATAGATGTCAACGAGTGTCGGCGGCCACAAGAGAGGAGAGTCTGTCACCACACCTGCCACAACACTGTGGGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS TCA 72 bp | GACAGACTCTCCTCTCTTGTGGCCGCCGACACTCGTTaGCATCTATACAGGAGTGTCGGTTGCCGTGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: DRLSSLVAADTR*HLYRSVGCRGG Trigger: ACCTCCACGGCAACCGACACTCCTGTATAGATGTCAACGAGTGTCGGCGGCCACAAGAGAGGAGAGTCTGTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS GCA 72 bp | GTTGACAGGGACTTCAGTGTCTCCACGGGCGTTCCGTaGAGCTTTGGCAAGTTCTCCATGAGGGGATGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VDRDFSVSTGVP*SFGKFSMRGWL Trigger: CAACCATCCCCTCATGGAGAACTTGCCAAAGCTGCACGGAACGCCCGTGGAGACACTGAAGTCCCTGTCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 72 bp | GGGTCCAAGGGTCCCCAGTGGGGAGGAACTTGGCACTaGAGTGGATATCAACTGTGTGGGAAAGAATGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GSKGPQWGGTWH*SGYQLCGKECG Trigger: CCCACATTCTTTCCCACACAGTTGATATCCACTCCAGTGCCAAGTTCCTCCCCACTGGGGACCCTTGGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 72 bp | GAGTTCTCCTTCTTTGGGGTGTCAATTGTGGACTGTTaGGGAACAGGGTTGGGGGTGTCCGGGAGAGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: EFSFFGVSIVDC*GTGLGVSGRAA Trigger: TGCAGCTCTCCCGGACACCCCCAACCCTGTTCCCCAACAGTCCACAATTGACACCCCAAAGAAGGAGAACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CAA 90 bp | CAGGCACTCGTCAGTGTCTTGGCAGCTGTGACGATCAGCAGACAGTaGCATGCCTGGCCCACATTCACACACGAAGCCACCTTCTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: QALVSVLAAVTISRQ*HAWPTFTHEATFCV Trigger: AACACAGAAGGTGGCTTCGTGTGTGAATGTGGGCCAGGCATGCAACTGTCTGCTGATCGTCACAGCTGCCAAGACACTGACGAGTGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS GCA 72 bp | GAACACAAGTACAGCAATCTGACTGTGGGGAAGCCTTaGAGGGACCAGGGGGACACTCGGGAGAGATACAAG | + |
|
Preference number: 6 (lower is better) Translates to: EHKYSNLTVGKP*RDQGDTRERYK Trigger: CTTGTATCTCTCCCGAGTGTCCCCCTGGTCCCTGCAAGGCTTCCCCACAGTCAGATTGCTGTACTTGTGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 72 bp | GTTGTGGCAGGTGTGGTGACAGACTCTCCTCTCTTGTaGCCGCCGACACTCGTTGACATCTATACAGGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: VVAGVVTDSPLL*PPTLVDIYTGV Trigger: CACTCCTGTATAGATGTCAACGAGTGTCGGCGGCCACAAGAGAGGAGAGTCTGTCACCACACCTGCCACAAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 72 bp | CCATTCACTACCTTTCTCCCTTCGAAGTTACAGTCGTaGCATACAGGGCAGCACTCGCCATCCGGGTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PFTTFLPSKLQS*HTGQHSPSGWK Trigger: CTTCCACCCGGATGGCGAGTGCTGCCCTGTATGCCACGACTGTAACTTCGAAGGGAGAAAGGTAGTGAATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS TCA 72 bp | GGCAGATGCACCGGGTACAGGGCTCATCATCCAAGGTaGACACCTGACCATTCACTACCTTTCTCCCTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: GRCTGYRAHHPR*TPDHSLPFSLR Trigger: TCGAAGGGAGAAAGGTAGTGAATGGTCAGGTGTTCACCTTGGATGATGAGCCCTGTACCCGGTGCATCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS TCA 72 bp | CCACGGGCGTTCCGTGCAGCTTTGGCAAGTTCTCCATaGGGGGATGGTTGCTGCTTTTCTTCTAGAGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: PRAFRAALASSP*GDGCCFSSRGN Trigger: GTTTCCTCTAGAAGAAAAGCAGCAACCATCCCCTCATGGAGAACTTGCCAAAGCTGCACGGAACGCCCGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 72 bp | TTGGCAGCTGTGACGATCAGCAGACAGTTGCATGCCTaGCCCACATTCACACACGAAGCCACCTTCTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LAAVTISRQLHA*PTFTHEATFCV Trigger: AACACAGAAGGTGGCTTCGTGTGTGAATGTGGGCCAGGCATGCAACTGTCTGCTGATCGTCACAGCTGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 72 bp | CAAGGGTCCCCAGTGGGGAGGAACTTGGCACTGGAGTaGATATCAACTGTGTGGGAAAGAATGTGGGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: QGSPVGRNLALE*ISTVWERMWVG Trigger: TCCTACCCACATTCTTTCCCACACAGTTGATATCCACTCCAGTGCCAAGTTCCTCCCCACTGGGGACCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CAA 72 bp | AGTGTTGTGGCAGGTGTGGTGACAGACTCTCCTCTCTaGTGGCCGCCGACACTCGTTGACATCTATACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SVVAGVVTDSPL*WPPTLVDIYTG Trigger: TCCTGTATAGATGTCAACGAGTGTCGGCGGCCACAAGAGAGGAGAGTCTGTCACCACACCTGCCACAACACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS TCA 72 bp | GGAAAGAATGTGGGTAGGACCTGGGTGGTAGATGGCTaGCTGATTGTTCTAACTCCAGTGGGGTATCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GKNVGRTWVVDG*LIVLTPVGYPG Trigger: CCCAGGATACCCCACTGGAGTTAGAACAATCAGTCAGCCATCTACCACCCAGGTCCTACCCACATTCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 72 bp | TGGTCATTGAAGGTGTTTCTGCCTCAGTTAAGGGGGTaGCAGACAGAAGCCACTGGAATGCTGTCTGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: WSLKVFLPQLRG*QTEATGMLSES Trigger: GGACTCAGACAGCATTCCAGTGGCTTCTGTCTGCCACCCCCTTAACTGAGGCAGAAACACCTTCAATGACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CAA 72 bp | CTCGAGGAAGTGGTGAGGGTCTCTGAGAGGTCAGCATaGGTCATTGAAGGTGTTTCTGCCTCAGTTAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LEEVVRVSERSA*VIEGVSASVKG Trigger: CCCCTTAACTGAGGCAGAAACACCTTCAATGACCAATGCTGACCTCTCAGAGACCCTCACCACTTCCTCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS TCA 72 bp | CACCGGGTACAGGGCTCATCATCCAAGGTGAACACCTaGCCATTCACTACCTTTCTCCCTTCGAAGTTACAG | + |
|
Preference number: 6 (lower is better) Translates to: HRVQGSSSKVNT*PFTTFLPSKLQ Trigger: CTGTAACTTCGAAGGGAGAAAGGTAGTGAATGGTCAGGTGTTCACCTTGGATGATGAGCCCTGTACCCGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS CCA 72 bp | TTAGACAGGTTTGTTCTTAAAAGCCTCTGCAGGAGGTaGACCATGGGTCTTGTAGGTGATGCCGATGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LDRFVLKSLCRR*TMGLVGDADGG Trigger: GCCTCCATCGGCATCACCTACAAGACCCATGGTCCACCTCCTGCAGAGGCTTTTAAGAACAAACCTGTCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS TCA 72 bp | CATTCACACACGAAGCCACCTTCTGTGTTCACGCAGTaGCCCTCACAAGATGAGCTTAAACACTCGTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: HSHTKPPSVFTQ*PSQDELKHSSM Trigger: CATTGACGAGTGTTTAAGCTCATCTTGTGAGGGTCACTGCGTGAACACAGAAGGTGGCTTCGTGTGTGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||
| CDS GCA 72 bp | GACTGTATGTTAGACAGGTTTGTTCTTAAAAGCCTCTaGAGGAGGTGGACCATGGGTCTTGTAGGTGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: DCMLDRFVLKSL*RRWTMGLVGDA Trigger: GGCATCACCTACAAGACCCATGGTCCACCTCCTGCAGAGGCTTTTAAGAACAAACCTGTCTAACATACAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055115.9 |
||