Pregenerated sensors for VWC2L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045648Ensembl transcript IDs: ENSMUST00000053922.12, ENSMUST00000161937.2, ENSMUST00000162182.2
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGGGAATCTACCCTACACAGTCTGCTTGCCTTGGCATTCGCGCTTTaGACACTGAGCAGGTTTCCACCAGTCCCCGTTGTGACAGTGACA | + |
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Preference number: 1 (lower is better) Translates to: RESTLHSLLALAFAL*TLSRFPPVPVVTVT Trigger: TGTCACTGTCACAACGGGGACTGGTGGAAACCTGCTCAGTGTTCAAAGCGCGAATGCCAAGGCAAGCAGACTGTGTAGGGTAGATTCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161937.2 |
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| 3UTR GCA 90 bp | CCTAGAACAAGTCACTGGTCGGGAATCTACCCTACACAGTCTGCTTaGCTTGGCATTCGCGCTTTGAACACTGAGCAGGTTTCCACCAGT | + |
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Preference number: 1 (lower is better) Translates to: PRTSHWSGIYPTQSA*LGIRALNTEQVSTS Trigger: ACTGGTGGAAACCTGCTCAGTGTTCAAAGCGCGAATGCCAAGGCAAGCAGACTGTGTAGGGTAGATTCCCGACCAGTGACTTGTTCTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161937.2 |
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| 3UTR CCA 90 bp | ATGTGCAGTGTAGAAGCCATAGCATCCCCTCCTAGAACAAGTCACTaGTCGGGAATCTACCCTACACAGTCTGCTTGCCTTGGCATTCGC | + |
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Preference number: 1 (lower is better) Translates to: MCSVEAIASPPRTSH*SGIYPTQSACLGIR Trigger: GCGAATGCCAAGGCAAGCAGACTGTGTAGGGTAGATTCCCGACCAGTGACTTGTTCTAGGAGGGGATGCTATGGCTTCTACACTGCACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161937.2 |
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| 3UTR TCA 90 bp | CACTTGACAGGGAGGAGACTGACCCTTGGAGTTACTGTTTGTGCATaGTCCAAAGGGCTCAAGGGCTCAACAAAGCCATATGTGGGCAGT | + |
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Preference number: 1 (lower is better) Translates to: HLTGRRLTLGVTVCA*SKGLKGSTKPYVGS Trigger: ACTGCCCACATATGGCTTTGTTGAGCCCTTGAGCCCTTTGGATCATGCACAAACAGTAACTCCAAGGGTCAGTCTCCTCCCTGTCAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR CCA 90 bp | GAGTGGGTGTTAGAAACACCACTTGACAGGGAGGAGACTGACCCTTaGAGTTACTGTTTGTGCATGATCCAAAGGGCTCAAGGGCTCAAC | + |
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Preference number: 1 (lower is better) Translates to: EWVLETPLDREETDP*SYCLCMIQRAQGLN Trigger: GTTGAGCCCTTGAGCCCTTTGGATCATGCACAAACAGTAACTCCAAGGGTCAGTCTCCTCCCTGTCAAGTGGTGTTTCTAACACCCACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR CCA 90 bp | AAGGCACCAACCTCGCAGCAAATTGGTGTTCTAAAGGAAGGCGGCTaGGTGTTCTTCCTCGGATGGCACCAGGATGGTTATTTGTATCAT | + |
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Preference number: 1 (lower is better) Translates to: KAPTSQQIGVLKEGG*VFFLGWHQDGYLYH Trigger: ATGATACAAATAACCATCCTGGTGCCATCCGAGGAAGAACACCCAGCCGCCTTCCTTTAGAACACCAATTTGCTGCGAGGTTGGTGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR TCA 90 bp | CTAGCCTACCGAATCCTTGCTGGGAATGTCAGTGGGCTCAGACTTTaGTGCAAAATCTCTGTATCTTCCCTTCCAAGCTGCACATCCCAT | + |
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Preference number: 1 (lower is better) Translates to: LAYRILAGNVSGLRL*CKISVSSLPSCTSH Trigger: ATGGGATGTGCAGCTTGGAAGGGAAGATACAGAGATTTTGCATCAAAGTCTGAGCCCACTGACATTCCCAGCAAGGATTCGGTAGGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR TCA 90 bp | CACAGTGGGGCTACTCACCCTGGTTCTGGTATTTATATCGCCCGATaGCAAGGTGGGCTTTGCTGTGTGTTTAATTATAAACCAGACTCA | + |
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Preference number: 1 (lower is better) Translates to: HSGATHPGSGIYIAR*QGGLCCVFNYKPDS Trigger: TGAGTCTGGTTTATAATTAAACACACAGCAAAGCCCACCTTGTCATCGGGCGATATAAATACCAGAACCAGGGTGAGTAGCCCCACTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR CCA 90 bp | CAAATTGGTGTTCTAAAGGAAGGCGGCTGGGTGTTCTTCCTCGGATaGCACCAGGATGGTTATTTGTATCATAACACAAGCACACTGTGT | + |
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Preference number: 1 (lower is better) Translates to: QIGVLKEGGWVFFLG*HQDGYLYHNTSTLC Trigger: ACACAGTGTGCTTGTGTTATGATACAAATAACCATCCTGGTGCCATCCGAGGAAGAACACCCAGCCGCCTTCCTTTAGAACACCAATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR CCA 90 bp | TGGTTGTTACACTCTAGCCTACCGAATCCTTGCTGGGAATGTCAGTaGGCTCAGACTTTGATGCAAAATCTCTGTATCTTCCCTTCCAAG | + |
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Preference number: 1 (lower is better) Translates to: WLLHSSLPNPCWECQ*AQTLMQNLCIFPSK Trigger: CTTGGAAGGGAAGATACAGAGATTTTGCATCAAAGTCTGAGCCCACTGACATTCCCAGCAAGGATTCGGTAGGCTAGAGTGTAACAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR CCA 90 bp | ATGTTTAGAAAGATTGATTCACAGTGGGGCTACTCACCCTGGTTCTaGTATTTATATCGCCCGATGACAAGGTGGGCTTTGCTGTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: MFRKIDSQWGYSPWF*YLYRPMTRWALLCV Trigger: AACACACAGCAAAGCCCACCTTGTCATCGGGCGATATAAATACCAGAACCAGGGTGAGTAGCCCCACTGTGAATCAATCTTTCTAAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR CCA 90 bp | TCAGAAATGTTTAGAAAGATTGATTCACAGTGGGGCTACTCACCCTaGTTCTGGTATTTATATCGCCCGATGACAAGGTGGGCTTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: SEMFRKIDSQWGYSP*FWYLYRPMTRWALL Trigger: CAGCAAAGCCCACCTTGTCATCGGGCGATATAAATACCAGAACCAGGGTGAGTAGCCCCACTGTGAATCAATCTTTCTAAACATTTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR GCA 90 bp | AGCCCCAAATATCAGAAACTGACACTGAGATATCTTTCTATGCAATaGGATCCTTCACAGAAGCCACATGAAGTGTATATTACGGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: SPKYQKLTLRYLSMQ*DPSQKPHEVYITGG Trigger: CCCACCCGTAATATACACTTCATGTGGCTTCTGTGAAGGATCGCATTGCATAGAAAGATATCTCAGTGTCAGTTTCTGATATTTGGGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR CCA 90 bp | AGAAGTCCGATGATTAAATGCTACAGTTTTAAATACCTGTCTCTGTaGGTTCTTGGGTCAACACATGGTGTTCTCGCTCACCTACTTGGT | + |
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Preference number: 1 (lower is better) Translates to: RSPMIKCYSFKYLSL*VLGSTHGVLAHLLG Trigger: ACCAAGTAGGTGAGCGAGAACACCATGTGTTGACCCAAGAACCCACAGAGACAGGTATTTAAAACTGTAGCATTTAATCATCGGACTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR TCA 90 bp | CTTTGCTGTGTGTTTAATTATAAACCAGACTCAAGGCTGGCATCATaGAGAAGTCCGATGATTAAATGCTACAGTTTTAAATACCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: LCCVFNYKPDSRLAS*RSPMIKCYSFKYLS Trigger: AGACAGGTATTTAAAACTGTAGCATTTAATCATCGGACTTCTTCATGATGCCAGCCTTGAGTCTGGTTTATAATTAAACACACAGCAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR TCA 90 bp | GAAACAACAATAATAAAATGGTTAGATCAGAAGAACTCTGATGTCTaGGCTTGGAAAGAATTTCTCAGTGACCTGGTAGTAGGAAATTGT | + |
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Preference number: 1 (lower is better) Translates to: ETTIIKWLDQKNSDV*AWKEFLSDLVVGNC Trigger: ACAATTTCCTACTACCAGGTCACTGAGAAATTCTTTCCAAGCTCAGACATCAGAGTTCTTCTGATCTAACCATTTTATTATTGTTGTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR CAA 90 bp | TCGGGAATCTACCCTACACAGTCTGCTTGCCTTGGCATTCGCGCTTaGAACACTGAGCAGGTTTCCACCAGTCCCCGTTGTGACAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: SGIYPTQSACLGIRA*NTEQVSTSPRCDSD Trigger: GTCACTGTCACAACGGGGACTGGTGGAAACCTGCTCAGTGTTCAAAGCGCGAATGCCAAGGCAAGCAGACTGTGTAGGGTAGATTCCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161937.2 |
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| 3UTR CAA 90 bp | GAAACACCACTTGACAGGGAGGAGACTGACCCTTGGAGTTACTGTTaGTGCATGATCCAAAGGGCTCAAGGGCTCAACAAAGCCATATGT | + |
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Preference number: 2 (lower is better) Translates to: ETPLDREETDPWSYC*CMIQRAQGLNKAIC Trigger: ACATATGGCTTTGTTGAGCCCTTGAGCCCTTTGGATCATGCACAAACAGTAACTCCAAGGGTCAGTCTCCTCCCTGTCAAGTGGTGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR CAA 90 bp | TCTAGCCTACCGAATCCTTGCTGGGAATGTCAGTGGGCTCAGACTTaGATGCAAAATCTCTGTATCTTCCCTTCCAAGCTGCACATCCCA | + |
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Preference number: 2 (lower is better) Translates to: SSLPNPCWECQWAQT*MQNLCIFPSKLHIP Trigger: TGGGATGTGCAGCTTGGAAGGGAAGATACAGAGATTTTGCATCAAAGTCTGAGCCCACTGACATTCCCAGCAAGGATTCGGTAGGCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR-3UTR TCA 90 bp | AGTAGCTCCTTAATAATAGAGAAGGGTCTAGGCTACATGGCTCTCTCTAGTAGCTCGCGCTTTGAACACTaGGCAGGTTTCCACCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: SSSLIIEKGLGYMALSSSSRFEH*AGFHQS Trigger: GGACTGGTGGAAACCTGCTCAGTGTTCAAAGCGCGA...GCTACTAGAGAGAGCCATGTAGCCTAGACCCTTCTCTATTATTAAGGAGCTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161937.2 |
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| 3UTR-3UTR GCA 90 bp | CTCGCAGCAAATTGGTGTTCTAAAGGAAGGCGGCTGGGTGTTCTTCCTCGGATGTGGAGTTACTGTTTGTaGATGATCCAAAGGGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: LAANWCSKGRRLGVLPRMWSYCL*MIQRAQ Trigger: TTGAGCCCTTTGGATCATGCACAAACAGTAACTCCA...CATCCGAGGAAGAACACCCAGCCGCCTTCCTTTAGAACACCAATTTGCTGCGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCAGCTGCGAACTGTCTGAAGAGTCTTGATGGTTGTTACACTCTAGCCTACAAGATTGATTCACAGTaGGGCTACTCACCCTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: LAAANCLKSLDGCYTLAYKIDSQ*GYSPWF Trigger: GAACCAGGGTGAGTAGCCCCACTGTGAATCAATCTT...GTAGGCTAGAGTGTAACAACCATCAAGACTCTTCAGACAGTTCGCAGCTGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR CAA 90 bp | AGCCCAAACCTGACACAAACAATGATAAAAATCCCCTTCTCAAGTTaGTCACAGAGGCCACTATTGATCCGCTGGCAGCTGCGAACTGTC | + |
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Preference number: 2 (lower is better) Translates to: SPNLTQTMIKIPFSS*SQRPLLIRWQLRTV Trigger: GACAGTTCGCAGCTGCCAGCGGATCAATAGTGGCCTCTGTGACAAACTTGAGAAGGGGATTTTTATCATTGTTTGTGTCAGGTTTGGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGCAGCTGCGAACTGTCTGAAGAGTCTTGATGGTTGTTACACTCTAGCCTACCTAGTTGGGTATTCCTaGTACCTAGGGCATGAAATC | + |
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Preference number: 2 (lower is better) Translates to: LAAANCLKSLDGCYTLAYLVGYS*YLGHEI Trigger: GATTTCATGCCCTAGGTAGCAGGAATACCCAACTAG...GTAGGCTAGAGTGTAACAACCATCAAGACTCTTCAGACAGTTCGCAGCTGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR CAA 90 bp | AGGACAGAGAGTGAACTAGGCCATGTGGTCTCAGAGCTGGGAATTTaGCACTTGACTAGAGGTGGCATCAGATACCCTGTGTATTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: RTESELGHVVSELGI*HLTRGGIRYPVYFF Trigger: AAAGAAATACACAGGGTATCTGATGCCACCTCTAGTCAAGTGCAAAATTCCCAGCTCTGAGACCACATGGCCTAGTTCACTCTCTGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR-3UTR TCA 90 bp | AGTAGCTCCTTAATAATAGAGAAGGGTCTAGGCTACATGGCTCTCTCTAGTAGCGTTACTGTTTGTGCATaGTCCAAAGGGCTCAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: SSSLIIEKGLGYMALSSSVTVCA*SKGLKG Trigger: GCCCTTGAGCCCTTTGGATCATGCACAAACAGTAAC...GCTACTAGAGAGAGCCATGTAGCCTAGACCCTTCTCTATTATTAAGGAGCTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR CAA 90 bp | CCCATTCCTTACCTGATTGTCAGAGGGCCCAGTTTACCTTTCTATTaGTTAGCCTACAAACATAACTACCCCCAAGAGAGCCAAGACTTG | + |
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Preference number: 2 (lower is better) Translates to: PIPYLIVRGPSLPFY*LAYKHNYPQESQDL Trigger: CAAGTCTTGGCTCTCTTGGGGGTAGTTATGTTTGTAGGCTAACAAATAGAAAGGTAAACTGGGCCCTCTGACAATCAGGTAAGGAATGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR CAA 90 bp | GGTCTGGCTCGTCAGCACATTAATTTTGGAAATGACAACTCTTTCTaGATGACAGGCAGTGCTTCCAGGAAGGAGAGGCTGACAATTTTG | + |
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Preference number: 2 (lower is better) Translates to: GLARQHINFGNDNSF*MTGSASRKERLTIL Trigger: CAAAATTGTCAGCCTCTCCTTCCTGGAAGCACTGCCTGTCATCAAGAAAGAGTTGTCATTTCCAAAATTAATGTGCTGACGAGCCAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR-3UTR TCA 90 bp | AATCCTTGCTGGGAATGTCAGTGGGCTCAGACTTTGATGCAAAATCTCTGTATCTTACCAGGGCAACCTTaGGACGCTTCAAAAGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: NPCWECQWAQTLMQNLCILPGQP*DASKVL Trigger: GAGAACTTTTGAAGCGTCTCAAGGTTGCCCTGGTAA...GATACAGAGATTTTGCATCAAAGTCTGAGCCCACTGACATTCCCAGCAAGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTTGCTGGGAATGTCAGTGGGCTCAGACTTTGATGCAAAATCTCTGTATCTTAAGATTGATTCACAGTaGGGCTACTCACCCTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: SLLGMSVGSDFDAKSLYLKIDSQ*GYSPWF Trigger: GAACCAGGGTGAGTAGCCCCACTGTGAATCAATCTT...AAGATACAGAGATTTTGCATCAAAGTCTGAGCCCACTGACATTCCCAGCAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCTTGGTTGTCTAGTTACCATCAAGCATTGGCAATTACAAAAGTGGTGTAGAAGAAGGTTTTGCTGGTaGCCCTGTTGTAGCTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: KLGCLVTIKHWQLQKWCRRRFCW*PCCSWQ Trigger: CTGCCAGCTACAACAGGGTCACCAGCAAAACCTTCT...TCTACACCACTTTTGTAATTGCCAATGCTTGATGGTAACTAGACAACCAAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 ENSMUST00000162182.2 |
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| 3UTR-3UTR TCA 90 bp | AAACTGTATAGTACAACTCTGTCTAGACATGGACTGAAGTATGGAGTGCCTTTGTTGGCATTCGCGCTTTaGACACTGAGCAGGTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: KLYSTTLSRHGLKYGVPLLAFAL*TLSRFP Trigger: TGGAAACCTGCTCAGTGTTCAAAGCGCGAATGCCAA...CAAAGGCACTCCATACTTCAGTCCATGTCTAGACAGAGTTGTACTATACAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161937.2 |
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| 3UTR-3UTR CCA 90 bp | CCACATGAAGTGTATATTACGGGTGGGAGCCGAAAACAGGAAAAAGAAAGACAATGGGGCTACTCACCCTaGTTCTGGTATTTATATCGC | + |
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Preference number: 2 (lower is better) Translates to: PHEVYITGGSRKQEKERQWGYSP*FWYLYR Trigger: GCGATATAAATACCAGAACCAGGGTGAGTAGCCCCA...TTGTCTTTCTTTTTCCTGTTTTCGGCTCCCACCCGTAATATACACTTCATGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR-3UTR CCA 90 bp | GGACTGAAGTATGGAGTGCCTTTGCTTTTGAGTGTAGGCATAAATCATGCAGAATGGGGCTACTCACCCTaGTTCTGGTATTTATATCGC | + |
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Preference number: 2 (lower is better) Translates to: GLKYGVPLLLSVGINHAEWGYSP*FWYLYR Trigger: GCGATATAAATACCAGAACCAGGGTGAGTAGCCCCA...TTCTGCATGATTTATGCCTACACTCAAAAGCAAAGGCACTCCATACTTCAGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGTATGGAGTGCCTTTGCTTTTGAGTGTAGGCATAAATCATGCAGAATTGCTACAGTCTGCTTGCCTTaGCATTCGCGCTTTGAACAC | + |
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Preference number: 2 (lower is better) Translates to: EVWSAFAFECRHKSCRIATVCLP*HSRFEH Trigger: GTGTTCAAAGCGCGAATGCCAAGGCAAGCAGACTGT...AGCAATTCTGCATGATTTATGCCTACACTCAAAAGCAAAGGCACTCCATACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161937.2 |
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| 3UTR CAA 90 bp | TGCCACAGAAATTCTGCTTTGTCTCTTCCTAAAGGTGGGAAAACATaGGTGCTTCGGAGTGATAAAGGACATGCTGTAGTGAAACTGAAC | + |
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Preference number: 2 (lower is better) Translates to: CHRNSALSLPKGGKT*VLRSDKGHAVVKLN Trigger: GTTCAGTTTCACTACAGCATGTCCTTTATCACTCCGAAGCACCAATGTTTTCCCACCTTTAGGAAGAGACAAAGCAGAATTTCTGTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR-3UTR TCA 90 bp | CCACATGAAGTGTATATTACGGGTGGGAGCCGAAAACAGGAAAAAGAAAGACAATTCACAGAAGCCACATaGAGTGTATATTACGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: PHEVYITGGSRKQEKERQFTEAT*SVYYGW Trigger: CCACCCGTAATATACACTTCATGTGGCTTCTGTGAA...TTGTCTTTCTTTTTCCTGTTTTCGGCTCCCACCCGTAATATACACTTCATGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGAAAGAGTGTCCTGAATCTGGATTTTAGATTTAGGGCTGAGTGGTTGTTATACTCACCCTGGTTCTaGTATTTATATCGCCCGATG | + |
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Preference number: 2 (lower is better) Translates to: GGKSVLNLDFRFRAEWLLYSPWF*YLYRPM Trigger: CATCGGGCGATATAAATACCAGAACCAGGGTGAGTA...TAACAACCACTCAGCCCTAAATCTAAAATCCAGATTCAGGACACTCTTTCCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR-3UTR CCA 90 bp | ATGACAGGCAGTGCTTCCAGGAAGGAGAGGCTGACAATTTTGAATGAGAAAACTCATCAGCACTTAAGGTaGAAAGAGTGTCCTGAATCT | + |
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Preference number: 2 (lower is better) Translates to: MTGSASRKERLTILNEKTHQHLR*KECPES Trigger: AGATTCAGGACACTCTTTCCACCTTAAGTGCTGATG...AGTTTTCTCATTCAAAATTGTCAGCCTCTCCTTCCTGGAAGCACTGCCTGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGGCTACATGGCTCTCTCTAGTAGCGATATTTTTCTCAGTTTTAAACCTTATTACCCATTCCTTACCTaGTTGTCAGAGGGCCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: LGYMALSSSDIFLSFKPYYPFLT*LSEGPV Trigger: AACTGGGCCCTCTGACAATCAGGTAAGGAATGGGTA...ATAAGGTTTAAAACTGAGAAAAATATCGCTACTAGAGAGAGCCATGTAGCCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR-3UTR TCA 90 bp | GGACTGAAGTATGGAGTGCCTTTGCTTTTGAGTGTAGGCATAAATCATGCAGAATGGAAAACACAGTCCTaGACCATAAAAACTGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: GLKYGVPLLLSVGINHAEWKTQS*TIKTAV Trigger: CACAGCAGTTTTTATGGTTCAGGACTGTGTTTTCCA...TTCTGCATGATTTATGCCTACACTCAAAAGCAAAGGCACTCCATACTTCAGTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGGCAAAGAAAACTGTATAGTACAACTCTGTCTAGACATGGACTGAAGTATGAGGAGACTGACCCTTaGAGTTACTGTTTGTGCATG | + |
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Preference number: 2 (lower is better) Translates to: SGQRKLYSTTLSRHGLKYEETDP*SYCLCM Trigger: CATGCACAAACAGTAACTCCAAGGGTCAGTCTCCTC...ATACTTCAGTCCATGTCTAGACAGAGTTGTACTATACAGTTTTCTTTGCCCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGGCTACATGGCTCTCTCTAGTAGCGATATTTTTCTCAGTTTTAAACCTTATCTGGTGTCCGGAGAGTaGGTGTTAGAAACACCACTT | + |
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Preference number: 2 (lower is better) Translates to: LGYMALSSSDIFLSFKPYLVSGE*VLETPL Trigger: AAGTGGTGTTTCTAACACCCACTCTCCGGACACCAG...ATAAGGTTTAAAACTGAGAAAAATATCGCTACTAGAGAGAGCCATGTAGCCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| 3UTR-3UTR TCA 90 bp | ATGACAGGCAGTGCTTCCAGGAAGGAGAGGCTGACAATTTTGAATGAGAAAACTAGCCAAACTGGTACTTaGAAGTCAGAAATGTTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: MTGSASRKERLTILNEKTSQTGT*KSEMFR Trigger: TCTAAACATTTCTGACTTTCAAGTACCAGTTTGGCT...AGTTTTCTCATTCAAAATTGTCAGCCTCTCCTTCCTGGAAGCACTGCCTGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGACAGGCAGTGCTTCCAGGAAGGAGAGGCTGACAATTTTGAATGAGAAAACTGTTACCATCAAGCATTaGCAATTACAAAAGTGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: MTGSASRKERLTILNEKTVTIKH*QLQKWC Trigger: ACACCACTTTTGTAATTGCCAATGCTTGATGGTAAC...AGTTTTCTCATTCAAAATTGTCAGCCTCTCCTTCCTGGAAGCACTGCCTGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGACAGGCAGTGCTTCCAGGAAGGAGAGGCTGACAATTTTGAATGAGAAAACTTTGTCCAAGAAAGCTTaGTTGTCTAGTTACCATCAA | + |
|
Preference number: 2 (lower is better) Translates to: MTGSASRKERLTILNEKTLSKKA*LSSYHQ Trigger: TTGATGGTAACTAGACAACCAAGCTTTCTTGGACAA...AGTTTTCTCATTCAAAATTGTCAGCCTCTCCTTCCTGGAAGCACTGCCTGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGACAGGCAGTGCTTCCAGGAAGGAGAGGCTGACAATTTTGAATGAGAAAACTACTTTAGGCTATGTCTaGGGACATTTGGTTGATATA | + |
|
Preference number: 2 (lower is better) Translates to: MTGSASRKERLTILNEKTTLGYV*GHLVDI Trigger: TATATCAACCAAATGTCCCCAGACATAGCCTAAAGT...AGTTTTCTCATTCAAAATTGTCAGCCTCTCCTTCCTGGAAGCACTGCCTGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR CAA 90 bp | CTTTCAGCCAAACTGGTACTTGAAAGTCAGAAATGTTTAGAAAGATaGATTCACAGTGGGGCTACTCACCCTGGTTCTGGTATTTATATC | + |
|
Preference number: 2 (lower is better) Translates to: LSAKLVLESQKCLER*IHSGATHPGSGIYI Trigger: GATATAAATACCAGAACCAGGGTGAGTAGCCCCACTGTGAATCAATCTTTCTAAACATTTCTGACTTTCAAGTACCAGTTTGGCTGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR CAA 90 bp | ACAACTCTGTCTAGACATGGACTGAAGTATGGAGTGCCTTTGCTTTaGAGTGTAGGCATAAATCATGCAGAATTGCTCATGAATGATTCA | + |
|
Preference number: 2 (lower is better) Translates to: TTLSRHGLKYGVPLL*SVGINHAELLMNDS Trigger: TGAATCATTCATGAGCAATTCTGCATGATTTATGCCTACACTCAAAAGCAAAGGCACTCCATACTTCAGTCCATGTCTAGACAGAGTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR-3UTR TCA 90 bp | CTAGGCTACATGGCTCTCTCTAGTAGCGATATTTTTCTCAGTTTTAAACCTTATTCATGGCTGTCTCTATaGTGTATCCATAGTGGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LGYMALSSSDIFLSFKPYSWLSL*CIHSGN Trigger: GTTCCCACTATGGATACATCATAGAGACAGCCATGA...ATAAGGTTTAAAACTGAGAAAAATATCGCTACTAGAGAGAGCCATGTAGCCTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR CAA 90 bp | TATAGTACAACTCTGTCTAGACATGGACTGAAGTATGGAGTGCCTTaGCTTTTGAGTGTAGGCATAAATCATGCAGAATTGCTCATGAAT | + |
|
Preference number: 2 (lower is better) Translates to: YSTTLSRHGLKYGVP*LLSVGINHAELLMN Trigger: ATTCATGAGCAATTCTGCATGATTTATGCCTACACTCAAAAGCAAAGGCACTCCATACTTCAGTCCATGTCTAGACAGAGTTGTACTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAGTATGGAGTGCCTTTGCTTTTGAGTGTAGGCATAAATCATGCAGAATTGCTGGATCTTATCAAATCTaGACCAAGGTTTTTAGGACA | + |
|
Preference number: 2 (lower is better) Translates to: EVWSAFAFECRHKSCRIAGSYQI*TKVFRT Trigger: TGTCCTAAAAACCTTGGTGCAGATTTGATAAGATCC...AGCAATTCTGCATGATTTATGCCTACACTCAAAAGCAAAGGCACTCCATACTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR-3UTR CCA 90 bp | AACCTGACACAAACAATGATAAAAATCCCCTTCTCAAGTTTGTCACAGAGGCCAGTTACCATCAAGCATTaGCAATTACAAAAGTGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: NLTQTMIKIPFSSLSQRPVTIKH*QLQKWC Trigger: ACACCACTTTTGTAATTGCCAATGCTTGATGGTAAC...TGGCCTCTGTGACAAACTTGAGAAGGGGATTTTTATCATTGTTTGTGTCAGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGAAAGCTTGGTTGTCTAGTTACCATCAAGCATTGGCAATTACAAAAGTGGTGTTGTCCAAGAAAGCTTaGTTGTCTAGTTACCATCAA | + |
|
Preference number: 2 (lower is better) Translates to: KKAWLSSYHQALAITKVVLSKKA*LSSYHQ Trigger: TTGATGGTAACTAGACAACCAAGCTTTCTTGGACAA...CACCACTTTTGTAATTGCCAATGCTTGATGGTAACTAGACAACCAAGCTTTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGCTACATGGCTCTCTCTAGTAGCGATATTTTTCTCAGTTTTAAACCTTATACTTTAGGCTATGTCTaGGGACATTTGGTTGATATA | + |
|
Preference number: 2 (lower is better) Translates to: LGYMALSSSDIFLSFKPYTLGYV*GHLVDI Trigger: TATATCAACCAAATGTCCCCAGACATAGCCTAAAGT...ATAAGGTTTAAAACTGAGAAAAATATCGCTACTAGAGAGAGCCATGTAGCCTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR TCA 72 bp | ACCCTACACAGTCTGCTTGCCTTGGCATTCGCGCTTTaGACACTGAGCAGGTTTCCACCAGTCCCCGTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: TLHSLLALAFAL*TLSRFPPVPVV Trigger: CACAACGGGGACTGGTGGAAACCTGCTCAGTGTTCAAAGCGCGAATGCCAAGGCAAGCAGACTGTGTAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161937.2 |
||
| 3UTR GCA 72 bp | AGTCACTGGTCGGGAATCTACCCTACACAGTCTGCTTaGCTTGGCATTCGCGCTTTGAACACTGAGCAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: SHWSGIYPTQSA*LGIRALNTEQV Trigger: AACCTGCTCAGTGTTCAAAGCGCGAATGCCAAGGCAAGCAGACTGTGTAGGGTAGATTCCCGACCAGTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161937.2 |
||
| 3UTR CCA 72 bp | GGTTTTGCTGGTGACCCTGTTGTAGCTGGCAGGGGTTaGTTTGCTCATTCTGTTGAGCGCGATACATGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GFAGDPVVAGRG*FAHSVERDTCA Trigger: TGCACATGTATCGCGCTCAACAGAATGAGCAAACCAACCCCTGCCAGCTACAACAGGGTCACCAGCAAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 ENSMUST00000162182.2 |
||
| 3UTR CCA 72 bp | ACCTCGCAGCAAATTGGTGTTCTAAAGGAAGGCGGCTaGGTGTTCTTCCTCGGATGGCACCAGGATGGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: TSQQIGVLKEGG*VFFLGWHQDGY Trigger: ATAACCATCCTGGTGCCATCCGAGGAAGAACACCCAGCCGCCTTCCTTTAGAACACCAATTTGCTGCGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCAGCTGCGAACTGTCTGAAGAGTCTTGATGGTTGTTACACTCTAGCCTACCTTGGCATTCGCGCTTaGAACACTGAGCAGGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LAAANCLKSLDGCYTLAYLGIRA*NTEQVS Trigger: GGAAACCTGCTCAGTGTTCAAAGCGCGAATGCCAAG...GTAGGCTAGAGTGTAACAACCATCAAGACTCTTCAGACAGTTCGCAGCTGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161937.2 |
||
| 3UTR CCA 72 bp | GTAGAAGCCATAGCATCCCCTCCTAGAACAAGTCACTaGTCGGGAATCTACCCTACACAGTCTGCTTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: VEAIASPPRTSH*SGIYPTQSACL Trigger: AAGGCAAGCAGACTGTGTAGGGTAGATTCCCGACCAGTGACTTGTTCTAGGAGGGGATGCTATGGCTTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161937.2 |
||
| 3UTR TCA 72 bp | TGTTGTAGCTGGCAGGGGTTGGTTTGCTCATTCTGTTaGGCGCGATACATGTGCAGTGTAGAAGCCATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: CCSWQGLVCSFC*ARYMCSVEAIA Trigger: TGCTATGGCTTCTACACTGCACATGTATCGCGCTCAACAGAATGAGCAAACCAACCCCTGCCAGCTACAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 ENSMUST00000162182.2 |
||
| 3UTR TCA 72 bp | GGGAGGAGACTGACCCTTGGAGTTACTGTTTGTGCATaGTCCAAAGGGCTCAAGGGCTCAACAAAGCCATAT | + |
|
Preference number: 3 (lower is better) Translates to: GRRLTLGVTVCA*SKGLKGSTKPY Trigger: ATATGGCTTTGTTGAGCCCTTGAGCCCTTTGGATCATGCACAAACAGTAACTCCAAGGGTCAGTCTCCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR TCA 72 bp | AAATCCCCTTCTCAAGTTTGTCACAGAGGCCACTATTaGTCCGCTGGCAGCTGCGAACTGTCTGAAGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: KSPSQVCHRGHY*SAGSCELSEES Trigger: AGACTCTTCAGACAGTTCGCAGCTGCCAGCGGATCAATAGTGGCCTCTGTGACAAACTTGAGAAGGGGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAACTGAAAGGCACCAACCTCGCAGCAAATTGGTGTTCTAAAGGAAGGCGGGTGAGCCCCAACATATaGGTCAAAATACCCATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: WELKGTNLAANWCSKGRRVSPNI*VKIPIP Trigger: AGGAATGGGTATTTTGACCAATATGTTGGGGCTCAC...CCGCCTTCCTTTAGAACACCAATTTGCTGCGAGGTTGGTGCCTTTCAGTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR TCA 72 bp | CGAATCCTTGCTGGGAATGTCAGTGGGCTCAGACTTTaGTGCAAAATCTCTGTATCTTCCCTTCCAAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RILAGNVSGLRL*CKISVSSLPSC Trigger: GCAGCTTGGAAGGGAAGATACAGAGATTTTGCATCAAAGTCTGAGCCCACTGACATTCCCAGCAAGGATTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR CCA 72 bp | AAGATTGATTCACAGTGGGGCTACTCACCCTGGTTCTaGTATTTATATCGCCCGATGACAAGGTGGGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: KIDSQWGYSPWF*YLYRPMTRWAL Trigger: CAAAGCCCACCTTGTCATCGGGCGATATAAATACCAGAACCAGGGTGAGTAGCCCCACTGTGAATCAATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR CCA 72 bp | GTTCTAAAGGAAGGCGGCTGGGTGTTCTTCCTCGGATaGCACCAGGATGGTTATTTGTATCATAACACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VLKEGGWVFFLG*HQDGYLYHNTS Trigger: GCTTGTGTTATGATACAAATAACCATCCTGGTGCCATCCGAGGAAGAACACCCAGCCGCCTTCCTTTAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR CCA 72 bp | CACTCTAGCCTACCGAATCCTTGCTGGGAATGTCAGTaGGCTCAGACTTTGATGCAAAATCTCTGTATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: HSSLPNPCWECQ*AQTLMQNLCIF Trigger: GAAGATACAGAGATTTTGCATCAAAGTCTGAGCCCACTGACATTCCCAGCAAGGATTCGGTAGGCTAGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR TCA 72 bp | TCTTTCTATGCAATGCGATCCTTCACAGAAGCCACATaGAGTGTATATTACGGGTGGGAGCCGAAAACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SFYAMRSFTEAT*SVYYGWEPKTG Trigger: TCCTGTTTTCGGCTCCCACCCGTAATATACACTTCATGTGGCTTCTGTGAAGGATCGCATTGCATAGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR CCA 72 bp | TTTAGAAAGATTGATTCACAGTGGGGCTACTCACCCTaGTTCTGGTATTTATATCGCCCGATGACAAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: FRKIDSQWGYSP*FWYLYRPMTRW Trigger: CCACCTTGTCATCGGGCGATATAAATACCAGAACCAGGGTGAGTAGCCCCACTGTGAATCAATCTTTCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCCTTGCTGGGAATGTCAGTGGGCTCAGACTTTGATGCAAAATCTCTGTATCCAGTGGGCTCAGACTTaGATGCAAAATCTCTGTATC | + |
|
Preference number: 3 (lower is better) Translates to: NPCWECQWAQTLMQNLCIQWAQT*MQNLCI Trigger: GATACAGAGATTTTGCATCAAAGTCTGAGCCCACTG...GATACAGAGATTTTGCATCAAAGTCTGAGCCCACTGACATTCCCAGCAAGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACTGAAGTATGGAGTGCCTTTGCTTTTGAGTGTAGGCATAAATCATGCAGAAAATGACAACTCTTTCTaGATGACAGGCAGTGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GLKYGVPLLLSVGINHAENDNSF*MTGSAS Trigger: GGAAGCACTGCCTGTCATCAAGAAAGAGTTGTCATT...TTCTGCATGATTTATGCCTACACTCAAAAGCAAAGGCACTCCATACTTCAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR TCA 72 bp | GCTACTCACCCTGGTTCTGGTATTTATATCGCCCGATaGCAAGGTGGGCTTTGCTGTGTGTTTAATTATAAA | + |
|
Preference number: 3 (lower is better) Translates to: ATHPGSGIYIAR*QGGLCCVFNYK Trigger: TTTATAATTAAACACACAGCAAAGCCCACCTTGTCATCGGGCGATATAAATACCAGAACCAGGGTGAGTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAGGCTACATGGCTCTCTCTAGTAGCGATATTTTTCTCAGTTTTAAACCTTATTCAGAGCTGGGAATTTaGCACTTGACTAGAGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LGYMALSSSDIFLSFKPYSELGI*HLTRGG Trigger: GCCACCTCTAGTCAAGTGCAAAATTCCCAGCTCTGA...ATAAGGTTTAAAACTGAGAAAAATATCGCTACTAGAGAGAGCCATGTAGCCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACTGTATAGTACAACTCTGTCTAGACATGGACTGAAGTATGGAGTGCCTTTGAATGACAACTCTTTCTaGATGACAGGCAGTGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: KLYSTTLSRHGLKYGVPLNDNSF*MTGSAS Trigger: GGAAGCACTGCCTGTCATCAAGAAAGAGTTGTCATT...CAAAGGCACTCCATACTTCAGTCCATGTCTAGACAGAGTTGTACTATACAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR CCA 72 bp | ATGATTAAATGCTACAGTTTTAAATACCTGTCTCTGTaGGTTCTTGGGTCAACACATGGTGTTCTCGCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: MIKCYSFKYLSL*VLGSTHGVLAH Trigger: GTGAGCGAGAACACCATGTGTTGACCCAAGAACCCACAGAGACAGGTATTTAAAACTGTAGCATTTAATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGCATTAGGCAACCTCAGGGCAAAGAAAACTGTATAGTACAACTCTGTCTAAGTTACCATCAAGCATaGGCAATTACAAAAGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: TGIRQPQGKENCIVQLCLSYHQA*AITKVV Trigger: CACCACTTTTGTAATTGCCAATGCTTGATGGTAACT...TAGACAGAGTTGTACTATACAGTTTTCTTTGCCCTGAGGTTGCCTAATGCCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGGCAAAGAAAACTGTATAGTACAACTCTGTCTAGACATGGACTGAAGTATATTACCAGGGCAACCTaGAGACGCTTCAAAAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SGQRKLYSTTLSRHGLKYITRAT*RRFKSS Trigger: AGAACTTTTGAAGCGTCTCAAGGTTGCCCTGGTAAT...ATACTTCAGTCCATGTCTAGACAGAGTTGTACTATACAGTTTTCTTTGCCCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTATGGAGTGCCTTTGCTTTTGAGTGTAGGCATAAATCATGCAGAATTGCTAAGTATGGAGTGCCTTaGCTTTTGAGTGTAGGCATA | + |
|
Preference number: 3 (lower is better) Translates to: EVWSAFAFECRHKSCRIAKYGVP*LLSVGI Trigger: TATGCCTACACTCAAAAGCAAAGGCACTCCATACTT...AGCAATTCTGCATGATTTATGCCTACACTCAAAAGCAAAGGCACTCCATACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGGCAAAGAAAACTGTATAGTACAACTCTGTCTAGACATGGACTGAAGTATAAGTATGGAGTGCCTTaGCTTTTGAGTGTAGGCATA | + |
|
Preference number: 3 (lower is better) Translates to: SGQRKLYSTTLSRHGLKYKYGVP*LLSVGI Trigger: TATGCCTACACTCAAAAGCAAAGGCACTCCATACTT...ATACTTCAGTCCATGTCTAGACAGAGTTGTACTATACAGTTTTCTTTGCCCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR TCA 72 bp | GATATAACTAGTTGGGTATTCCTGCTACCTAGGGCATaGAATCTAAGAATGTCGCTTAGTATCATAAGAGCG | + |
|
Preference number: 3 (lower is better) Translates to: DITSWVFLLPRA*NLRMSLSIIRA Trigger: CGCTCTTATGATACTAAGCGACATTCTTAGATTTCATGCCCTAGGTAGCAGGAATACCCAACTAGTTATATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR CCA 72 bp | GAGCCAAGACTTGGATACTCTTCAATCTTCCCCCTCTaGAAGGATATTTTCCCACAAAGTTTCTTTATCAAA | + |
|
Preference number: 3 (lower is better) Translates to: EPRLGYSSIFPL*KDIFPQSFFIK Trigger: TTTGATAAAGAAACTTTGTGGGAAAATATCCTTCCAGAGGGGGAAGATTGAAGAGTATCCAAGTCTTGGCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR-3UTR CAA 90 bp | AACCTGACACAAACAATGATAAAAATCCCCTTCTCAAGTTTGTCACAGAGGCCAACTAATGAAATTGTATaGTGCAAGACTCACTCTACC | + |
|
Preference number: 3 (lower is better) Translates to: NLTQTMIKIPFSSLSQRPTNEIV*CKTHST Trigger: GGTAGAGTGAGTCTTGCACAATACAATTTCATTAGT...TGGCCTCTGTGACAAACTTGAGAAGGGGATTTTTATCATTGTTTGTGTCAGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR TCA 72 bp | TCCATTATTAGACTAGCAGCATTACCAGGGCAACCTTaGGACGCTTCAAAAGTTCTCTTTAATCGTTTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: SIIRLAALPGQP*DASKVLFNRLV Trigger: TACTAAACGATTAAAGAGAACTTTTGAAGCGTCTCAAGGTTGCCCTGGTAATGCTGCTAGTCTAATAATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR GCA 72 bp | TATCAGAAACTGACACTGAGATATCTTTCTATGCAATaGGATCCTTCACAGAAGCCACATGAAGTGTATATT | + |
|
Preference number: 3 (lower is better) Translates to: YQKLTLRYLSMQ*DPSQKPHEVYI Trigger: AATATACACTTCATGTGGCTTCTGTGAAGGATCGCATTGCATAGAAAGATATCTCAGTGTCAGTTTCTGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR TCA 72 bp | ATAATAAAATGGTTAGATCAGAAGAACTCTGATGTCTaGGCTTGGAAAGAATTTCTCAGTGACCTGGTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: IIKWLDQKNSDV*AWKEFLSDLVV Trigger: TACTACCAGGTCACTGAGAAATTCTTTCCAAGCTCAGACATCAGAGTTCTTCTGATCTAACCATTTTATTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR TCA 72 bp | GTGTTTAATTATAAACCAGACTCAAGGCTGGCATCATaGAGAAGTCCGATGATTAAATGCTACAGTTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: VFNYKPDSRLAS*RSPMIKCYSFK Trigger: TTTAAAACTGTAGCATTTAATCATCGGACTTCTTCATGATGCCAGCCTTGAGTCTGGTTTATAATTAAACAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR CAA 72 bp | TACCCTACACAGTCTGCTTGCCTTGGCATTCGCGCTTaGAACACTGAGCAGGTTTCCACCAGTCCCCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YPTQSACLGIRA*NTEQVSTSPRC Trigger: ACAACGGGGACTGGTGGAAACCTGCTCAGTGTTCAAAGCGCGAATGCCAAGGCAAGCAGACTGTGTAGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161937.2 |
||
| CDS-3UTR GCA 90 bp | CTCGCAGCAAATTGGTGTTCTAAAGGAAGGCGGCTGGGTGTTCTTCCTCGGATGCACGGACAGTTGGAATaGCCCGGGAAAAACCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LAANWCSKGRRLGVLPRMHGQLE*PGKNRS Trigger: AGAACGGTTTTTCCCGGGGCATTCCAACTGTCCGTG...CATCCGAGGAAGAACACCCAGCCGCCTTCCTTTAGAACACCAATTTGCTGCGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTAGAAGCCATAGCATCCCCTCCTAGAACAAGTCACTGGTCGGGAATCTACTCGCGCTTTGAACACTaGGCAGGTTTCCACCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVEAIASPPRTSHWSGIYSRFEH*AGFHQS Trigger: GGACTGGTGGAAACCTGCTCAGTGTTCAAAGCGCGA...GTAGATTCCCGACCAGTGACTTGTTCTAGGAGGGGATGCTATGGCTTCTACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
||
| CDS-3UTR GCA 90 bp | CAGCAAATTGGTGTTCTAAAGGAAGGCGGCTGGGTGTTCTTCCTCGGATGGCACGACACACTCAGGAACTaGGCAGTCTGCTACAACACA | + |
|
Preference number: 4 (lower is better) Translates to: QQIGVLKEGGWVFFLGWHDTLRN*AVCYNT Trigger: TGTGTTGTAGCAGACTGCGCAGTTCCTGAGTGTGTC...GTGCCATCCGAGGAAGAACACCCAGCCGCCTTCCTTTAGAACACCAATTTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053922.12 |
||
| CDS-3UTR TCA 90 bp | TGCAGTGTAGAAGCCATAGCATCCCCTCCTAGAACAAGTCACTGGTCGGGAATCTTGGCATTCGCGCTTTaGACACTGAGCAGGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSVEAIASPPRTSHWSGILAFAL*TLSRFP Trigger: TGGAAACCTGCTCAGTGTTCAAAGCGCGAATGCCAA...GATTCCCGACCAGTGACTTGTTCTAGGAGGGGATGCTATGGCTTCTACACTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
||
| CDS-3UTR TCA 90 bp | GTTGTAGCTGGCAGGGGTTGGTTTGCTCATTCTGTTGAGCGCGATACATGTGCATTGGCATTCGCGCTTTaGACACTGAGCAGGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VVAGRGWFAHSVERDTCALAFAL*TLSRFP Trigger: TGGAAACCTGCTCAGTGTTCAAAGCGCGAATGCCAA...TGCACATGTATCGCGCTCAACAGAATGAGCAAACCAACCCCTGCCAGCTACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
||
| CDS-3UTR GCA 90 bp | CGATACATGTGCAGTGTAGAAGCCATAGCATCCCCTCCTAGAACAAGTCACTGGCACAGTGAACTTCATTaGTGGGCTCACAGCGACACC | + |
|
Preference number: 4 (lower is better) Translates to: RYMCSVEAIASPPRTSHWHSELH*WAHSDT Trigger: GGTGTCGCTGTGAGCCCAGCAATGAAGTTCACTGTG...CCAGTGACTTGTTCTAGGAGGGGATGCTATGGCTTCTACACTGCACATGTATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTTTCCACCAGTCCCCGTTGTGACAGTGACAGATGTTACAGTCGTCCACTTTTAGGGCATTCTGGCTaGTCACAGACAGGTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QVSTSPRCDSDRCYSRPLLGHSG*SQTGPS Trigger: AGATGGACCTGTCTGTGACCAGCCAGAATGCCCTAA...AAGTGGACGACTGTAACATCTGTCACTGTCACAACGGGGACTGGTGGAAACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161937.2 |
||
| CDS-3UTR TCA 90 bp | CGATACATGTGCAGTGTAGAAGCCATAGCATCCCCTCCTAGAACAAGTCACTGGGTTCATAGATTGGGTTaGCACACTCAGGAACTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RYMCSVEAIASPPRTSHWVHRLG*HTQELR Trigger: GCGCAGTTCCTGAGTGTGTCAACCCAATCTATGAAC...CCAGTGACTTGTTCTAGGAGGGGATGCTATGGCTTCTACACTGCACATGTATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
||
| CDS-3UTR CCA 90 bp | CGATACATGTGCAGTGTAGAAGCCATAGCATCCCCTCCTAGAACAAGTCACTGGTTAGGGCATTCTGGCTaGTCACAGACAGGTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RYMCSVEAIASPPRTSHWLGHSG*SQTGPS Trigger: AGATGGACCTGTCTGTGACCAGCCAGAATGCCCTAA...CCAGTGACTTGTTCTAGGAGGGGATGCTATGGCTTCTACACTGCACATGTATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 ENSMUST00000162182.2 |
||
| CDS-3UTR CCA 90 bp | GTTGTAGCTGGCAGGGGTTGGTTTGCTCATTCTGTTGAGCGCGATACATGTGCAAGTGAACTTCATTGCTaGGCTCACAGCGACACCATT | + |
|
Preference number: 4 (lower is better) Translates to: VVAGRGWFAHSVERDTCASELHC*AHSDTI Trigger: AATGGTGTCGCTGTGAGCCCAGCAATGAAGTTCACT...TGCACATGTATCGCGCTCAACAGAATGAGCAAACCAACCCCTGCCAGCTACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
||
| CDS-3UTR CCA 90 bp | CTCGCAGCAAATTGGTGTTCTAAAGGAAGGCGGCTGGGTGTTCTTCCTCGGATGCTCTGGTTCATAGATTaGGTTGACACACTCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LAANWCSKGRRLGVLPRMLWFID*VDTLRN Trigger: GTTCCTGAGTGTGTCAACCCAATCTATGAACCAGAG...CATCCGAGGAAGAACACCCAGCCGCCTTCCTTTAGAACACCAATTTGCTGCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053922.12 |
||
| CDS-3UTR CCA 90 bp | CGATACATGTGCAGTGTAGAAGCCATAGCATCCCCTCCTAGAACAAGTCACTGGACAGTCTGCTTGCCTTaGCATTCGCGCTTTGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: RYMCSVEAIASPPRTSHWTVCLP*HSRFEH Trigger: GTGTTCAAAGCGCGAATGCCAAGGCAAGCAGACTGT...CCAGTGACTTGTTCTAGGAGGGGATGCTATGGCTTCTACACTGCACATGTATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
||
| 3UTR CAA 72 bp | AGTGAACTAGGCCATGTGGTCTCAGAGCTGGGAATTTaGCACTTGACTAGAGGTGGCATCAGATACCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SELGHVVSELGI*HLTRGGIRYPV Trigger: CACAGGGTATCTGATGCCACCTCTAGTCAAGTGCAAAATTCCCAGCTCTGAGACCACATGGCCTAGTTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR CAA 72 bp | CTTGACAGGGAGGAGACTGACCCTTGGAGTTACTGTTaGTGCATGATCCAAAGGGCTCAAGGGCTCAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LDREETDPWSYC*CMIQRAQGLNK Trigger: TTTGTTGAGCCCTTGAGCCCTTTGGATCATGCACAAACAGTAACTCCAAGGGTCAGTCTCCTCCCTGTCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTCATTCTGTTGAGCGCGATACATGTGCAGTGTAGAAGCCATAGCATCCCCAATTTTAGGGCATTCTaGCTGGTCACAGACAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLILLSAIHVQCRSHSIPNFRAF*LVTDRS Trigger: GGACCTGTCTGTGACCAGCCAGAATGCCCTAAAATT...GGGGATGCTATGGCTTCTACACTGCACATGTATCGCGCTCAACAGAATGAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 ENSMUST00000162182.2 |
||
| 3UTR CAA 72 bp | CCGAATCCTTGCTGGGAATGTCAGTGGGCTCAGACTTaGATGCAAAATCTCTGTATCTTCCCTTCCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PNPCWECQWAQT*MQNLCIFPSKL Trigger: CAGCTTGGAAGGGAAGATACAGAGATTTTGCATCAAAGTCTGAGCCCACTGACATTCCCAGCAAGGATTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGAAAGAGTGTCCTGAATCTGGATTTTAGATTTAGGGCTGAGTGGTTGTTATCGCGCTTTGAACACTaGGCAGGTTTCCACCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGKSVLNLDFRFRAEWLLSRFEH*AGFHQS Trigger: GGACTGGTGGAAACCTGCTCAGTGTTCAAAGCGCGA...TAACAACCACTCAGCCCTAAATCTAAAATCCAGATTCAGGACACTCTTTCCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053922.12 |
||
| CDS-3UTR CCA 90 bp | GATCCTTCACAGAAGCCACATGAAGTGTATATTACGGGTGGGAGCCGAAAACAGGCGACACCATTCACATaGAGAGGGCTTAAATTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DPSQKPHEVYITGGSRKQATPFT*RGLKFL Trigger: GAGGAATTTAAGCCCTCTCCATGTGAATGGTGTCGC...CTGTTTTCGGCTCCCACCCGTAATATACACTTCATGTGGCTTCTGTGAAGGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053922.12 |
||
| CDS-3UTR CCA 90 bp | GTTGTAGCTGGCAGGGGTTGGTTTGCTCATTCTGTTGAGCGCGATACATGTGCAAGGACAACATTGCTCTaGTTCATAGATTGGGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VVAGRGWFAHSVERDTCARTTLL*FIDWVD Trigger: GTCAACCCAATCTATGAACCAGAGCAATGTTGTCCT...TGCACATGTATCGCGCTCAACAGAATGAGCAAACCAACCCCTGCCAGCTACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
||
| CDS-3UTR CCA 90 bp | TGGGAACTGAAAGGCACCAACCTCGCAGCAAATTGGTGTTCTAAAGGAAGGCGGCACTTCAATGCCAGCTaGAATTATTGTAGTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WELKGTNLAANWCSKGRRHFNAS*NYCSSC Trigger: GCAGGAACTACAATAATTCCAGCTGGCATTGAAGTG...CCGCCTTCCTTTAGAACACCAATTTGCTGCGAGGTTGGTGCCTTTCAGTTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053922.12 |
||
| CDS-3UTR TCA 90 bp | GTTGTAGCTGGCAGGGGTTGGTTTGCTCATTCTGTTGAGCGCGATACATGTGCATTTGTACATTTCGGATaGATTTTAGGGCATTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VVAGRGWFAHSVERDTCAFVHFG*ILGHSG Trigger: GCCAGAATGCCCTAAAATTCATCCGAAATGTACAAA...TGCACATGTATCGCGCTCAACAGAATGAGCAAACCAACCCCTGCCAGCTACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 ENSMUST00000162182.2 |
||
| CDS-3UTR GCA 90 bp | GAAGTATGGAGTGCCTTTGCTTTTGAGTGTAGGCATAAATCATGCAGAATTGCTCACGGACAGTTGGAATaGCCCGGGAAAAACCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EVWSAFAFECRHKSCRIAHGQLE*PGKNRS Trigger: AGAACGGTTTTTCCCGGGGCATTCCAACTGTCCGTG...AGCAATTCTGCATGATTTATGCCTACACTCAAAAGCAAAGGCACTCCATACTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| CDS-3UTR CCA 90 bp | GATCCTTCACAGAAGCCACATGAAGTGTATATTACGGGTGGGAGCCGAAAACAGTCAGATTGTCATTACTaGAAGCCTGGTCACCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DPSQKPHEVYITGGSRKQSDCHY*KPGHLH Trigger: ATGAAGGTGACCAGGCTTCCAGTAATGACAATCTGA...CTGTTTTCGGCTCCCACCCGTAATATACACTTCATGTGGCTTCTGTGAAGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| CDS-3UTR TCA 90 bp | GATCCTTCACAGAAGCCACATGAAGTGTATATTACGGGTGGGAGCCGAAAACAGTTTGTACATTTCGGATaGATTTTAGGGCATTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DPSQKPHEVYITGGSRKQFVHFG*ILGHSG Trigger: GCCAGAATGCCCTAAAATTCATCCGAAATGTACAAA...CTGTTTTCGGCTCCCACCCGTAATATACACTTCATGTGGCTTCTGTGAAGGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| CDS-3UTR GCA 90 bp | AAGAAAGCTTGGTTGTCTAGTTACCATCAAGCATTGGCAATTACAAAAGTGGTGCACAGTGAACTTCATTaGTGGGCTCACAGCGACACC | + |
|
Preference number: 4 (lower is better) Translates to: KKAWLSSYHQALAITKVVHSELH*WAHSDT Trigger: GGTGTCGCTGTGAGCCCAGCAATGAAGTTCACTGTG...CACCACTTTTGTAATTGCCAATGCTTGATGGTAACTAGACAACCAAGCTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
||
| CDS-3UTR CCA 90 bp | ATCAACAGTGAGCCCCAACATATTGGTCAAAATACCCATTCCTTACCTGATTGTTTAGGGCATTCTGGCTaGTCACAGACAGGTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: INSEPQHIGQNTHSLPDCLGHSG*SQTGPS Trigger: AGATGGACCTGTCTGTGACCAGCCAGAATGCCCTAA...ACAATCAGGTAAGGAATGGGTATTTTGACCAATATGTTGGGGCTCACTGTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR CAA 72 bp | TACCTGATTGTCAGAGGGCCCAGTTTACCTTTCTATTaGTTAGCCTACAAACATAACTACCCCCAAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YLIVRGPSLPFY*LAYKHNYPQES Trigger: GCTCTCTTGGGGGTAGTTATGTTTGTAGGCTAACAAATAGAAAGGTAAACTGGGCCCTCTGACAATCAGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| 3UTR CAA 72 bp | AATGCTACAGTTTTAAATACCTGTCTCTGTGGGTTCTaGGGTCAACACATGGTGTTCTCGCTCACCTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: NATVLNTCLCGF*GQHMVFSLTYL Trigger: CAAGTAGGTGAGCGAGAACACCATGTGTTGACCCAAGAACCCACAGAGACAGGTATTTAAAACTGTAGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| CDS-3UTR TCA 90 bp | AACCTGACACAAACAATGATAAAAATCCCCTTCTCAAGTTTGTCACAGAGGCCATCTGCTACAACACAGTaGACTTCATTGCTGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NLTQTMIKIPFSSLSQRPSATTQ*TSLLGS Trigger: TGAGCCCAGCAATGAAGTTCACTGTGTTGTAGCAGA...TGGCCTCTGTGACAAACTTGAGAAGGGGATTTTTATCATTGTTTGTGTCAGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053922.12 |
||
| CDS-3UTR TCA 90 bp | AAGAAAGCTTGGTTGTCTAGTTACCATCAAGCATTGGCAATTACAAAAGTGGTGGTTCATAGATTGGGTTaGCACACTCAGGAACTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KKAWLSSYHQALAITKVVVHRLG*HTQELR Trigger: GCGCAGTTCCTGAGTGTGTCAACCCAATCTATGAAC...CACCACTTTTGTAATTGCCAATGCTTGATGGTAACTAGACAACCAAGCTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
||
| CDS-3UTR GCA 90 bp | ACTTGGATACTCTTCAATCTTCCCCCTCTGGAAGGATATTTTCCCACAAAGTTTAGGAACTGCGCAGTCTaGTACAACACAGTGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TWILFNLPPLEGYFPTKFRNCAV*YNTVNF Trigger: GAAGTTCACTGTGTTGTAGCAGACTGCGCAGTTCCT...AAACTTTGTGGGAAAATATCCTTCCAGAGGGGGAAGATTGAAGAGTATCCAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053922.12 |
||
| CDS-3UTR GCA 90 bp | AAGAAAGCTTGGTTGTCTAGTTACCATCAAGCATTGGCAATTACAAAAGTGGTGGACACACTCAGGAACTaGGCAGTCTGCTACAACACA | + |
|
Preference number: 4 (lower is better) Translates to: KKAWLSSYHQALAITKVVDTLRN*AVCYNT Trigger: TGTGTTGTAGCAGACTGCGCAGTTCCTGAGTGTGTC...CACCACTTTTGTAATTGCCAATGCTTGATGGTAACTAGACAACCAAGCTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
||
| CDS-3UTR CCA 90 bp | ATCAACAGTGAGCCCCAACATATTGGTCAAAATACCCATTCCTTACCTGATTGTAATTTTAGGGCATTCTaGCTGGTCACAGACAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: INSEPQHIGQNTHSLPDCNFRAF*LVTDRS Trigger: GGACCTGTCTGTGACCAGCCAGAATGCCCTAAAATT...ACAATCAGGTAAGGAATGGGTATTTTGACCAATATGTTGGGGCTCACTGTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| CDS-3UTR CCA 90 bp | GAAGTATGGAGTGCCTTTGCTTTTGAGTGTAGGCATAAATCATGCAGAATTGCTAATTTTAGGGCATTCTaGCTGGTCACAGACAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EVWSAFAFECRHKSCRIANFRAF*LVTDRS Trigger: GGACCTGTCTGTGACCAGCCAGAATGCCCTAAAATT...AGCAATTCTGCATGATTTATGCCTACACTCAAAAGCAAAGGCACTCCATACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTGCTGGGAATGTCAGTGGGCTCAGACTTTGATGCAAAATCTCTGTATCTTAGGACAACATTGCTCTaGTTCATAGATTGGGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLLGMSVGSDFDAKSLYLRTTLL*FIDWVD Trigger: GTCAACCCAATCTATGAACCAGAGCAATGTTGTCCT...AAGATACAGAGATTTTGCATCAAAGTCTGAGCCCACTGACATTCCCAGCAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053922.12 |
||
| CDS-3UTR CCA 90 bp | TACTCTTCAATCTTCCCCCTCTGGAAGGATATTTTCCCACAAAGTTTCTTTATCACAGTCTGCTTGCCTTaGCATTCGCGCTTTGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: YSSIFPLWKDIFPQSFFITVCLP*HSRFEH Trigger: GTGTTCAAAGCGCGAATGCCAAGGCAAGCAGACTGT...GATAAAGAAACTTTGTGGGAAAATATCCTTCCAGAGGGGGAAGATTGAAGAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053922.12 |
||
| CDS-3UTR CCA 90 bp | TCCTTGCTGGGAATGTCAGTGGGCTCAGACTTTGATGCAAAATCTCTGTATCTTTCCTGCAAAGCAGTTTaGACCTTAAATTCCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLGMSVGSDFDAKSLYLSCKAV*TLNSSK Trigger: CTTGGAGGAATTTAAGGTCCAAACTGCTTTGCAGGA...AAGATACAGAGATTTTGCATCAAAGTCTGAGCCCACTGACATTCCCAGCAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161937.2 |
||
| CDS-3UTR TCA 90 bp | AAGAAAGCTTGGTTGTCTAGTTACCATCAAGCATTGGCAATTACAAAAGTGGTGTCTGCTACAACACAGTaGACTTCATTGCTGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KKAWLSSYHQALAITKVVSATTQ*TSLLGS Trigger: TGAGCCCAGCAATGAAGTTCACTGTGTTGTAGCAGA...CACCACTTTTGTAATTGCCAATGCTTGATGGTAACTAGACAACCAAGCTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCTTGGTTGTCTAGTTACCATCAAGCATTGGCAATTACAAAAGTGGTGTGCGACACCATTCACATaGAGAGGGCTTAAATTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKLGCLVTIKHWQLQKWCATPFT*RGLKFL Trigger: GAGGAATTTAAGCCCTCTCCATGTGAATGGTGTCGC...ACACCACTTTTGTAATTGCCAATGCTTGATGGTAACTAGACAACCAAGCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
||
| CDS-3UTR CCA 90 bp | CTGTGGCTTTCAGCCAAACTGGTACTTGAAAGTCAGAAATGTTTAGAAAGATTGAGTGAACTTCATTGCTaGGCTCACAGCGACACCATT | + |
|
Preference number: 4 (lower is better) Translates to: LWLSAKLVLESQKCLERLSELHC*AHSDTI Trigger: AATGGTGTCGCTGTGAGCCCAGCAATGAAGTTCACT...CAATCTTTCTAAACATTTCTGACTTTCAAGTACCAGTTTGGCTGAAAGCCACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053922.12 |
||
| 3UTR CAA 72 bp | TCTAGACATGGACTGAAGTATGGAGTGCCTTTGCTTTaGAGTGTAGGCATAAATCATGCAGAATTGCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SRHGLKYGVPLL*SVGINHAELLM Trigger: CATGAGCAATTCTGCATGATTTATGCCTACACTCAAAAGCAAAGGCACTCCATACTTCAGTCCATGTCTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
||
| CDS-3UTR GCA 90 bp | GGACTGAAGTATGGAGTGCCTTTGCTTTTGAGTGTAGGCATAAATCATGCAGAAAGTTTGGACCATTTTTaGAGACAGGACAACATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLKYGVPLLLSVGINHAESLDHF*RQDNIA Trigger: AGCAATGTTGTCCTGTCTGCAAAAATGGTCCAAACT...TTCTGCATGATTTATGCCTACACTCAAAAGCAAAGGCACTCCATACTTCAGTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053922.12 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCTTGGTTGTCTAGTTACCATCAAGCATTGGCAATTACAAAAGTGGTGTCTCTGGTTCATAGATTaGGTTGACACACTCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RKLGCLVTIKHWQLQKWCLWFID*VDTLRN Trigger: GTTCCTGAGTGTGTCAACCCAATCTATGAACCAGAG...ACACCACTTTTGTAATTGCCAATGCTTGATGGTAACTAGACAACCAAGCTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTTGGTTGTCTAGTTACCATCAAGCATTGGCAATTACAAAAGTGGTGTAGATCCTGCAAAGCAGTTTaGACCATTTTTGCAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLGCLVTIKHWQLQKWCRSCKAV*TIFADR Trigger: CCTGTCTGCAAAAATGGTCCAAACTGCTTTGCAGGA...TCTACACCACTTTTGTAATTGCCAATGCTTGATGGTAACTAGACAACCAAGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
||
| CDS-3UTR CCA 90 bp | AAGAAAGCTTGGTTGTCTAGTTACCATCAAGCATTGGCAATTACAAAAGTGGTGTCAGATTGTCATTACTaGAAGCCTGGTCACCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KKAWLSSYHQALAITKVVSDCHY*KPGHLH Trigger: ATGAAGGTGACCAGGCTTCCAGTAATGACAATCTGA...CACCACTTTTGTAATTGCCAATGCTTGATGGTAACTAGACAACCAAGCTTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| CDS-3UTR CCA 90 bp | CTAGGCTACATGGCTCTCTCTAGTAGCGATATTTTTCTCAGTTTTAAACCTTATTCCTGCAAAGCAGTTTaGACCATTTTTGCAGACAGG | + |
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Preference number: 4 (lower is better) Translates to: LGYMALSSSDIFLSFKPYSCKAV*TIFADR Trigger: CCTGTCTGCAAAAATGGTCCAAACTGCTTTGCAGGA...ATAAGGTTTAAAACTGAGAAAAATATCGCTACTAGAGAGAGCCATGTAGCCTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000053922.12 |
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| CDS-3UTR TCA 90 bp | AAGAAAGCTTGGTTGTCTAGTTACCATCAAGCATTGGCAATTACAAAAGTGGTGTTTGTACATTTCGGATaGATTTTAGGGCATTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: KKAWLSSYHQALAITKVVFVHFG*ILGHSG Trigger: GCCAGAATGCCCTAAAATTCATCCGAAATGTACAAA...CACCACTTTTGTAATTGCCAATGCTTGATGGTAACTAGACAACCAAGCTTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 ENSMUST00000162182.2 |
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| CDS-3UTR CCA 90 bp | AAGAGAAAGAGAGAGAGATTTCCTCTTCGTAAAATATTCACTTTTGTCAACCCCCACTTCAATGCCAGCTaGAATTATTGTAGTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: KRKRERFPLRKIFTFVNPHFNAS*NYCSSC Trigger: GCAGGAACTACAATAATTCCAGCTGGCATTGAAGTG...GGGGTTGACAAAAGTGAATATTTTACGAAGAGGAAATCTCTCTCTCTTTCTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
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| CDS-3UTR GCA 90 bp | AAGAGAAAGAGAGAGAGATTTCCTCTTCGTAAAATATTCACTTTTGTCAACCCCAGTTTGGACCATTTTTaGAGACAGGACAACATTGCT | + |
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Preference number: 4 (lower is better) Translates to: KRKRERFPLRKIFTFVNPSLDHF*RQDNIA Trigger: AGCAATGTTGTCCTGTCTGCAAAAATGGTCCAAACT...GGGGTTGACAAAAGTGAATATTTTACGAAGAGGAAATCTCTCTCTCTTTCTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
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| CDS GCA 90 bp | TCACAGACAGGTCCATCTAGGGCACAGACACACGGACAGTTGGAATaGCCCGGGAAAAACCGTTCTCCCAACTTGTATACAAAGCCGCTG | + |
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Preference number: 5 (lower is better) Translates to: SQTGPSRAQTHGQLE*PGKNRSPNLYTKPL Trigger: CAGCGGCTTTGTATACAAGTTGGGAGAACGGTTTTTCCCGGGGCATTCCAACTGTCCGTGTGTCTGTGCCCTAGATGGACCTGTCTGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| CDS CCA 90 bp | GCTGGTCACAGACAGGTCCATCTAGGGCACAGACACACGGACAGTTaGAATGCCCCGGGAAAAACCGTTCTCCCAACTTGTATACAAAGC | + |
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Preference number: 5 (lower is better) Translates to: AGHRQVHLGHRHTDS*NAPGKTVLPTCIQS Trigger: GCTTTGTATACAAGTTGGGAGAACGGTTTTTCCCGGGGCATTCCAACTGTCCGTGTGTCTGTGCCCTAGATGGACCTGTCTGTGACCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| CDS TCA 90 bp | ATTGGGTTGACACACTCAGGAACTGCGCAGTCTGCTACAACACAGTaGACTTCATTGCTGGGCTCACAGCGACACCATTCACATGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: IGLTHSGTAQSATTQ*TSLLGSQRHHSHGE Trigger: CTCTCCATGTGAATGGTGTCGCTGTGAGCCCAGCAATGAAGTTCACTGTGTTGTAGCAGACTGCGCAGTTCCTGAGTGTGTCAACCCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
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| CDS-3UTR CAA 90 bp | TTGCTCATTCTGTTGAGCGCGATACATGTGCAGTGTAGAAGCCATAGCATCCCCCTTGGCATTCGCGCTTaGAACACTGAGCAGGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: LLILLSAIHVQCRSHSIPLGIRA*NTEQVS Trigger: GGAAACCTGCTCAGTGTTCAAAGCGCGAATGCCAAG...GGGGATGCTATGGCTTCTACACTGCACATGTATCGCGCTCAACAGAATGAGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
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| CDS-3UTR CAA 90 bp | CAGCAAATTGGTGTTCTAAAGGAAGGCGGCTGGGTGTTCTTCCTCGGATGGCACTCATCAAAGATCAGATaGTCATTACTGGAAGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: QQIGVLKEGGWVFFLGWHSSKIR*SLLEAW Trigger: CCAGGCTTCCAGTAATGACAATCTGATCTTTGATGA...GTGCCATCCGAGGAAGAACACCCAGCCGCCTTCCTTTAGAACACCAATTTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| CDS-3UTR CAA 90 bp | AGTGTAGAAGCCATAGCATCCCCTCCTAGAACAAGTCACTGGTCGGGAATCTACAACCGTTCTCCCAACTaGTATACAAAGCCGCTGTCA | + |
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Preference number: 5 (lower is better) Translates to: SVEAIASPPRTSHWSGIYNRSPN*YTKPLS Trigger: TGACAGCGGCTTTGTATACAAGTTGGGAGAACGGTT...GTAGATTCCCGACCAGTGACTTGTTCTAGGAGGGGATGCTATGGCTTCTACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| CDS-3UTR CAA 90 bp | TTGCTCATTCTGTTGAGCGCGATACATGTGCAGTGTAGAAGCCATAGCATCCCCTCGGGACAGCATCCATaGTGTTCCACCTTTGTACAT | + |
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Preference number: 5 (lower is better) Translates to: LLILLSAIHVQCRSHSIPSGQHP*CSTFVH Trigger: ATGTACAAAGGTGGAACACAATGGATGCTGTCCCGA...GGGGATGCTATGGCTTCTACACTGCACATGTATCGCGCTCAACAGAATGAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 ENSMUST00000162182.2 |
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| CDS-3UTR CAA 90 bp | GTTGTAGCTGGCAGGGGTTGGTTTGCTCATTCTGTTGAGCGCGATACATGTGCACAGTTTGGACCATTTTaGCAGACAGGACAACATTGC | + |
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Preference number: 5 (lower is better) Translates to: VVAGRGWFAHSVERDTCAQFGPF*QTGQHC Trigger: GCAATGTTGTCCTGTCTGCAAAAATGGTCCAAACTG...TGCACATGTATCGCGCTCAACAGAATGAGCAAACCAACCCCTGCCAGCTACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
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| CDS TCA 90 bp | CATTCGGGACAGCATCCATTGTGTTCCACCTTTGTACATTTCGGATaGATTTTAGGGCATTCTGGCTGGTCACAGACAGGTCCATCTAGG | + |
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Preference number: 5 (lower is better) Translates to: HSGQHPLCSTFVHFG*ILGHSGWSQTGPSR Trigger: CCTAGATGGACCTGTCTGTGACCAGCCAGAATGCCCTAAAATTCATCCGAAATGTACAAAGGTGGAACACAATGGATGCTGTCCCGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| CDS GCA 90 bp | ACAACATTGCTCTGGTTCATAGATTGGGTTGACACACTCAGGAACTaGGCAGTCTGCTACAACACAGTGAACTTCATTGCTGGGCTCACA | + |
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Preference number: 5 (lower is better) Translates to: TTLLWFIDWVDTLRN*AVCYNTVNFIAGLT Trigger: TGTGAGCCCAGCAATGAAGTTCACTGTGTTGTAGCAGACTGCGCAGTTCCTGAGTGTGTCAACCCAATCTATGAACCAGAGCAATGTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
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| CDS-3UTR CAA 90 bp | AATCCTTGCTGGGAATGTCAGTGGGCTCAGACTTTGATGCAAAATCTCTGTATCCTTGGCATTCGCGCTTaGAACACTGAGCAGGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: NPCWECQWAQTLMQNLCILGIRA*NTEQVS Trigger: GGAAACCTGCTCAGTGTTCAAAGCGCGAATGCCAAG...GATACAGAGATTTTGCATCAAAGTCTGAGCCCACTGACATTCCCAGCAAGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053922.12 |
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| CDS TCA 90 bp | CATTCGGGACAGCATCCATTGTGTTCCACCTTTGTACATTTCGGATaGATTTTAGGGCATTCTGGCTGGTCACAGACAGGTCCATCTTCA | + |
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Preference number: 5 (lower is better) Translates to: HSGQHPLCSTFVHFG*ILGHSGWSQTGPSS Trigger: TGAAGATGGACCTGTCTGTGACCAGCCAGAATGCCCTAAAATTCATCCGAAATGTACAAAGGTGGAACACAATGGATGCTGTCCCGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162182.2 |
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| CDS CCA 90 bp | ATTGTGTTCCACCTTTGTACATTTCGGATGAATTTTAGGGCATTCTaGCTGGTCACAGACAGGTCCATCTTCATCAGCAGGATAGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: IVFHLCTFRMNFRAF*LVTDRSIFISRIVF Trigger: GAAGACTATCCTGCTGATGAAGATGGACCTGTCTGTGACCAGCCAGAATGCCCTAAAATTCATCCGAAATGTACAAAGGTGGAACACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162182.2 |
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| CDS-3UTR CAA 90 bp | CCACATGAAGTGTATATTACGGGTGGGAGCCGAAAACAGGAAAAAGAAAGACAAAACCGTTCTCCCAACTaGTATACAAAGCCGCTGTCA | + |
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Preference number: 5 (lower is better) Translates to: PHEVYITGGSRKQEKERQNRSPN*YTKPLS Trigger: TGACAGCGGCTTTGTATACAAGTTGGGAGAACGGTT...TTGTCTTTCTTTTTCCTGTTTTCGGCTCCCACCCGTAATATACACTTCATGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| CDS-3UTR CAA 90 bp | ACTGGCATTAGGCAACCTCAGGGCAAAGAAAACTGTATAGTACAACTCTGTCTATCATCAAAGATCAGATaGTCATTACTGGAAGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: TGIRQPQGKENCIVQLCLSSKIR*SLLEAW Trigger: CCAGGCTTCCAGTAATGACAATCTGATCTTTGATGA...TAGACAGAGTTGTACTATACAGTTTTCTTTGCCCTGAGGTTGCCTAATGCCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| CDS-3UTR CAA 90 bp | CTGTGGCTTTCAGCCAAACTGGTACTTGAAAGTCAGAAATGTTTAGAAAGATTGTCGGGACAGCATCCATaGTGTTCCACCTTTGTACAT | + |
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Preference number: 5 (lower is better) Translates to: LWLSAKLVLESQKCLERLSGQHP*CSTFVH Trigger: ATGTACAAAGGTGGAACACAATGGATGCTGTCCCGA...CAATCTTTCTAAACATTTCTGACTTTCAAGTACCAGTTTGGCTGAAAGCCACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| CDS-3UTR CAA 90 bp | TACTCTTCAATCTTCCCCCTCTGGAAGGATATTTTCCCACAAAGTTTCTTTATCTCGGGACAGCATCCATaGTGTTCCACCTTTGTACAT | + |
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Preference number: 5 (lower is better) Translates to: YSSIFPLWKDIFPQSFFISGQHP*CSTFVH Trigger: ATGTACAAAGGTGGAACACAATGGATGCTGTCCCGA...GATAAAGAAACTTTGTGGGAAAATATCCTTCCAGAGGGGGAAGATTGAAGAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| CDS-3UTR CAA 90 bp | AAGCTTGGTTGTCTAGTTACCATCAAGCATTGGCAATTACAAAAGTGGTGTAGACAGTTTGGACCATTTTaGCAGACAGGACAACATTGC | + |
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Preference number: 5 (lower is better) Translates to: KLGCLVTIKHWQLQKWCRQFGPF*QTGQHC Trigger: GCAATGTTGTCCTGTCTGCAAAAATGGTCCAAACTG...TCTACACCACTTTTGTAATTGCCAATGCTTGATGGTAACTAGACAACCAAGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
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| CDS-3UTR CAA 90 bp | AGAAAGCTTGGTTGTCTAGTTACCATCAAGCATTGGCAATTACAAAAGTGGTGTTTCCTGCAAAGCAGTTaGGACCATTTTTGCAGACAG | + |
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Preference number: 5 (lower is better) Translates to: RKLGCLVTIKHWQLQKWCFLQSS*DHFCRQ Trigger: CTGTCTGCAAAAATGGTCCAAACTGCTTTGCAGGAA...ACACCACTTTTGTAATTGCCAATGCTTGATGGTAACTAGACAACCAAGCTTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
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| CDS-3UTR CAA 90 bp | AAGAAAGCTTGGTTGTCTAGTTACCATCAAGCATTGGCAATTACAAAAGTGGTGTTCCTGCAAAGCAGTTaGGACCATTTTTGCAGACAG | + |
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Preference number: 5 (lower is better) Translates to: KKAWLSSYHQALAITKVVFLQSS*DHFCRQ Trigger: CTGTCTGCAAAAATGGTCCAAACTGCTTTGCAGGAA...CACCACTTTTGTAATTGCCAATGCTTGATGGTAACTAGACAACCAAGCTTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
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| CDS-3UTR CAA 90 bp | ATCAACAGTGAGCCCCAACATATTGGTCAAAATACCCATTCCTTACCTGATTGTCATTGTGTTCCACCTTaGTACATTTCGGATGAATTT | + |
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Preference number: 5 (lower is better) Translates to: INSEPQHIGQNTHSLPDCHCVPP*YISDEF Trigger: AAATTCATCCGAAATGTACAAAGGTGGAACACAATG...ACAATCAGGTAAGGAATGGGTATTTTGACCAATATGTTGGGGCTCACTGTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| CDS CCA 72 bp | AGACAGGTCCATCTAGGGCACAGACACACGGACAGTTaGAATGCCCCGGGAAAAACCGTTCTCCCAACTTGT | + |
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Preference number: 6 (lower is better) Translates to: RQVHLGHRHTDS*NAPGKTVLPTC Trigger: ACAAGTTGGGAGAACGGTTTTTCCCGGGGCATTCCAACTGTCCGTGTGTCTGTGCCCTAGATGGACCTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| CDS CAA 90 bp | GGCTGGTCACAGACAGGTCCATCTAGGGCACAGACACACGGACAGTaGGAATGCCCCGGGAAAAACCGTTCTCCCAACTTGTATACAAAG | + |
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Preference number: 6 (lower is better) Translates to: GWSQTGPSRAQTHGQ*ECPGKNRSPNLYTK Trigger: CTTTGTATACAAGTTGGGAGAACGGTTTTTCCCGGGGCATTCCAACTGTCCGTGTGTCTGTGCCCTAGATGGACCTGTCTGTGACCAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| CDS GCA 72 bp | GGTCCATCTAGGGCACAGACACACGGACAGTTGGAATaGCCCGGGAAAAACCGTTCTCCCAACTTGTATACA | + |
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Preference number: 6 (lower is better) Translates to: GPSRAQTHGQLE*PGKNRSPNLYT Trigger: TGTATACAAGTTGGGAGAACGGTTTTTCCCGGGGCATTCCAACTGTCCGTGTGTCTGTGCCCTAGATGGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| CDS GCA 72 bp | GAACTGCGCAGTCTGCTACAACACAGTGAACTTCATTaGTGGGCTCACAGCGACACCATTCACATGGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: ELRSLLQHSELH*WAHSDTIHMER Trigger: CCTCTCCATGTGAATGGTGTCGCTGTGAGCCCAGCAATGAAGTTCACTGTGTTGTAGCAGACTGCGCAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
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| CDS TCA 72 bp | ACACACTCAGGAACTGCGCAGTCTGCTACAACACAGTaGACTTCATTGCTGGGCTCACAGCGACACCATTCA | + |
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Preference number: 6 (lower is better) Translates to: THSGTAQSATTQ*TSLLGSQRHHS Trigger: TGAATGGTGTCGCTGTGAGCCCAGCAATGAAGTTCACTGTGTTGTAGCAGACTGCGCAGTTCCTGAGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
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| CDS CAA 72 bp | CAGTTGGAATGCCCCGGGAAAAACCGTTCTCCCAACTaGTATACAAAGCCGCTGTCATCCACACACCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: QLECPGKNRSPN*YTKPLSSTHPF Trigger: GAAAGGGTGTGTGGATGACAGCGGCTTTGTATACAAGTTGGGAGAACGGTTTTTCCCGGGGCATTCCAACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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| CDS TCA 72 bp | AGACAGGACAACATTGCTCTGGTTCATAGATTGGGTTaGCACACTCAGGAACTGCGCAGTCTGCTACAACAC | + |
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Preference number: 6 (lower is better) Translates to: RQDNIALVHRLG*HTQELRSLLQH Trigger: GTGTTGTAGCAGACTGCGCAGTTCCTGAGTGTGTCAACCCAATCTATGAACCAGAGCAATGTTGTCCTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
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| CDS GCA 72 bp | CTCTGGTTCATAGATTGGGTTGACACACTCAGGAACTaGGCAGTCTGCTACAACACAGTGAACTTCATTGCT | + |
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Preference number: 6 (lower is better) Translates to: LWFIDWVDTLRN*AVCYNTVNFIA Trigger: AGCAATGAAGTTCACTGTGTTGTAGCAGACTGCGCAGTTCCTGAGTGTGTCAACCCAATCTATGAACCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000162182.2 |
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| CDS CCA 72 bp | CACCTTTGTACATTTCGGATGAATTTTAGGGCATTCTaGCTGGTCACAGACAGGTCCATCTTCATCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: HLCTFRMNFRAF*LVTDRSIFISR Trigger: CCTGCTGATGAAGATGGACCTGTCTGTGACCAGCCAGAATGCCCTAAAATTCATCCGAAATGTACAAAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162182.2 |
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| CDS CCA 72 bp | TCCCTCGATAGTCATCAAAGATCAGATTGTCATTACTaGAAGCCTGGTCACCTTCATCAGCAGGATAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: SLDSHQRSDCHY*KPGHLHQQDSL Trigger: AAGACTATCCTGCTGATGAAGGTGACCAGGCTTCCAGTAATGACAATCTGATCTTTGATGACTATCGAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053922.12 ENSMUST00000161937.2 |
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