Pregenerated sensors for VWC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050830Ensembl transcript IDs: ENSMUST00000056344.5, ENSMUST00000109681.8, ENSMUST00000129670.8
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTTCCCTGGGGGCATGCTTGTTTCATTTCTTTTTGCTGCCAGAGGTaGGAACCTGCCCAAGGCCAAGCTTCGACCACAGCAATGTATTGT | + |
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Preference number: 1 (lower is better) Translates to: VPWGHACFISFCCQR*EPAQGQASTTAMYC Trigger: ACAATACATTGCTGTGGTCGAAGCTTGGCCTTGGGCAGGTTCTCACCTCTGGCAGCAAAAAGAAATGAAACAAGCATGCCCCCAGGGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR TCA 90 bp | TTTTGGGAGGAGCAGCTCTTAGCTGACAAGTTTCAGGACTGCAGCTaGGTTAGGAGAGACTGGTGCTGTCCATTCCCTCCTGTGTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: FWEEQLLADKFQDCS*VRRDWCCPFPPVFL Trigger: AAGAAACACAGGAGGGAATGGACAGCACCAGTCTCTCCTAACTCAGCTGCAGTCCTGAAACTTGTCAGCTAAGAGCTGCTCCTCCCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR GCA 90 bp | GGAGAGACTGGTGCTGTCCATTCCCTCCTGTGTTTCTTGGGATGTTaGTGGCTCCTTTCTAGAGGTCAGTGTCTAAACATGAATGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: GETGAVHSLLCFLGC*WLLSRGQCLNMNEK Trigger: CTTCTCATTCATGTTTAGACACTGACCTCTAGAAAGGAGCCAGCAACATCCCAAGAAACACAGGAGGGAATGGACAGCACCAGTCTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR CCA 90 bp | GAGACTGGTGCTGTCCATTCCCTCCTGTGTTTCTTGGGATGTTGCTaGCTCCTTTCTAGAGGTCAGTGTCTAAACATGAATGAGAAGACT | + |
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Preference number: 1 (lower is better) Translates to: ETGAVHSLLCFLGCC*LLSRGQCLNMNEKT Trigger: AGTCTTCTCATTCATGTTTAGACACTGACCTCTAGAAAGGAGCCAGCAACATCCCAAGAAACACAGGAGGGAATGGACAGCACCAGTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR GCA 90 bp | CCACAGGCGCATTTGTTGACTATTTCGTGGCACTTGCTCAATGAATaGTTCCTAGACATATTTTGGAAGCTGATAAAAACTTTGAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: PQAHLLTISWHLLNE*FLDIFWKLIKTLRD Trigger: GTCTCTCAAAGTTTTTATCAGCTTCCAAAATATGTCTAGGAAGCATTCATTGAGCAAGTGCCACGAAATAGTCAACAAATGCGCCTGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGTGTGTCATTAACTGTGGAATAAGTGAGAGATTGGCTAGGGCTCACACTTTTTGCTGCCAGAGGTaGGAACCTGCCCAAGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: TECVINCGISERLARAHTFCCQR*EPAQGQ Trigger: TTGGCCTTGGGCAGGTTCTCACCTCTGGCAGCAAAA...AGTGTGAGCCCTAGCCAATCTCTCACTTATTCCACAGTTAATGACACACTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR-3UTR TCA 90 bp | GCCGCTGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACACCAACCATTTTCCTTaGCTCCTTATCCAAAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: AAALLSCITQKHGDMQIHTNHFP*LLIQSL Trigger: AAGACTTTGGATAAGGAGTCAAGGAAAATGGTTGGT...GTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCAGCGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTGTCATTCAATAATTACTGAAATTCTTGTATACTGGCAGGGTTTGGGGGTATATACCGGTACACAGTaGGGACGGTTGACAACAGCA | + |
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Preference number: 2 (lower is better) Translates to: GCHSIITEILVYWQGLGVYTGTQ*GRLTTA Trigger: TGCTGTTGTCAACCGTCCTCACTGTGTACCGGTATA...TACCCCCAAACCCTGCCAGTATACAAGAATTTCAGTAATTATTGAATGACAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTTCTTTGAATCAGCCTGCGAATTCCCTGTGAATATAGTGCATATTCTGGGCAATGAGAGTGAGGTTTaGCATTGTGATGAAGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: PFFESACEFPVNIVHILGNESEV*HCDEGH Trigger: GTGACCTTCATCACAATGGCAAACCTCACTCTCATT...GCCCAGAATATGCACTATATTCACAGGGAATTCGCAGGCTGATTCAAAGAAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTTCTTTGAATCAGCCTGCGAATTCCCTGTGAATATAGTGCATATTCTGGGCCAGGTATGCGTTTCATaGATCATAAACTGTCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: PFFESACEFPVNIVHILGQVCVS*IINCQQ Trigger: CTGCTGACAGTTTATGATGCATGAAACGCATACCTG...GCCCAGAATATGCACTATATTCACAGGGAATTCGCAGGCTGATTCAAAGAAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGTGTGTCATTAACTGTGGAATAAGTGAGAGATTGGCTAGGGCTCACACTTGTTTCTTGGGATGTTaGTGGCTCCTTTCTAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: TECVINCGISERLARAHTCFLGC*WLLSRG Trigger: ACCTCTAGAAAGGAGCCAGCAACATCCCAAGAAACA...AGTGTGAGCCCTAGCCAATCTCTCACTTATTCCACAGTTAATGACACACTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTGTCATTCAATAATTACTGAAATTCTTGTATACTGGCAGGGTTTGGGGGTAATAGGAACACTGTGCTaGTTCCTGAGATGTCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: GCHSIITEILVYWQGLGVIGTLC*FLRCLW Trigger: CCACAGACATCTCAGGAATCAGCACAGTGTTCCTAT...TACCCCCAAACCCTGCCAGTATACAAGAATTTCAGTAATTATTGAATGACAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
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| 3UTR-3UTR GCA 90 bp | GCCGCTGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTTTAGAGAGGGAGTATaGCCAAAGTTCTTATTGATG | + |
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Preference number: 2 (lower is better) Translates to: AAALLSCITQKHGDMQIHFREGV*PKFLLM Trigger: CATCAATAAGAACTTTGGGCATACTCCCTCTCTAAA...GTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCAGCGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTTCTTTGAATCAGCCTGCGAATTCCCTGTGAATATAGTGCATATTCTGGGCTTGTTGACTATTTCGTaGCACTTGCTCAATGAATGC | + |
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Preference number: 2 (lower is better) Translates to: PFFESACEFPVNIVHILGLLTIS*HLLNEC Trigger: GCATTCATTGAGCAAGTGCCACGAAATAGTCAACAA...GCCCAGAATATGCACTATATTCACAGGGAATTCGCAGGCTGATTCAAAGAAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTGTCATTCAATAATTACTGAAATTCTTGTATACTGGCAGGGTTTGGGGGTAATTCATGGGCTGCAATaGGAACTGAGAAAGTACCTG | + |
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Preference number: 2 (lower is better) Translates to: GCHSIITEILVYWQGLGVIHGLQ*ELRKYL Trigger: CAGGTACTTTCTCAGTTCTCATTGCAGCCCATGAAT...TACCCCCAAACCCTGCCAGTATACAAGAATTTCAGTAATTATTGAATGACAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTGTCATTCAATAATTACTGAAATTCTTGTATACTGGCAGGGTTTGGGGGTACACTGTGCTGATTCCTaGGATGTCTGTGGCATATTT | + |
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Preference number: 2 (lower is better) Translates to: GCHSIITEILVYWQGLGVHCADS*DVCGIF Trigger: AAATATGCCACAGACATCTCAGGAATCAGCACAGTG...TACCCCCAAACCCTGCCAGTATACAAGAATTTCAGTAATTATTGAATGACAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
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| 3UTR-3UTR TCA 90 bp | GATATCACCAAAACTGGATGTTTTTCTCACAGCAGAGTTGATGATAGCAGGCAGGTGTCTAAACATGAATaGGAAGACTTTGTGCCACAG | + |
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Preference number: 2 (lower is better) Translates to: DITKTGCFSHSRVDDSRQVSKHE*EDFVPQ Trigger: CTGTGGCACAAAGTCTTCTCATTCATGTTTAGACAC...CTGCCTGCTATCATCAACTCTGCTGTGAGAAAAACATCCAGTTTTGGTGATATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR-3UTR GCA 90 bp | GCCGCTGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCCATTTCTGTCTCTTaGTGTATTTGTTACCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: AAALLSCITQKHGDMQIHSISVS*CICYQE Trigger: TTCTTGGTAACAAATACAGCAAGAGACAGAAATGGA...GTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCAGCGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
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| 3UTR CAA 90 bp | AATGTAAAAGCTAAGAATGGCAATTGGTACAATCACTTATTTGCATaGACTTACAGCCTTCAGGGAGCATGCTGGAGTAAGGGGTCTATG | + |
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Preference number: 2 (lower is better) Translates to: NVKAKNGNWYNHLFA*TYSLQGACWSKGSM Trigger: CATAGACCCCTTACTCCAGCATGCTCCCTGAAGGCTGTAAGTCAATGCAAATAAGTGATTGTACCAATTGCCATTCTTAGCTTTTACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR-3UTR TCA 90 bp | GGATGTTGCTGGCTCCTTTCTAGAGGTCAGTGTCTAAACATGAATGAGAAGACTATGTTACTGAATCTTTaGGTGAACATTCTCACCATG | + |
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Preference number: 2 (lower is better) Translates to: GCCWLLSRGQCLNMNEKTMLLNL*VNILTM Trigger: CATGGTGAGAATGTTCACTCAAAGATTCAGTAACAT...AGTCTTCTCATTCATGTTTAGACACTGACCTCTAGAAAGGAGCCAGCAACATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTTCTTTGAATCAGCCTGCGAATTCCCTGTGAATATAGTGCATATTCTGGGCTCCATTTCTGTCTCTTaGTGTATTTGTTACCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: PFFESACEFPVNIVHILGSISVS*CICYQE Trigger: TTCTTGGTAACAAATACAGCAAGAGACAGAAATGGA...GCCCAGAATATGCACTATATTCACAGGGAATTCGCAGGCTGATTCAAAGAAGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR-3UTR GCA 90 bp | GCTACAGAAACAGATACTCATGAAGAAAACAAACCAGCCCTAATTTCCCTTTGTTGGGTGATATATTTCTaGAGGAGAGTCTTAGTAGCC | + |
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Preference number: 2 (lower is better) Translates to: ATETDTHEENKPALISLCWVIYF*RRVLVA Trigger: GGCTACTAAGACTCTCCTGCAGAAATATATCACCCA...ACAAAGGGAAATTAGGGCTGGTTTGTTTTCTTCATGAGTATCTGTTTCTGTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
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| 3UTR-3UTR TCA 90 bp | GCTACAGAAACAGATACTCATGAAGAAAACAAACCAGCCCTAATTTCCCTTTGTACCAACCATTTTCCTTaGCTCCTTATCCAAAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: ATETDTHEENKPALISLCTNHFP*LLIQSL Trigger: AAGACTTTGGATAAGGAGTCAAGGAAAATGGTTGGT...ACAAAGGGAAATTAGGGCTGGTTTGTTTTCTTCATGAGTATCTGTTTCTGTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
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| 3UTR-3UTR TCA 90 bp | GCTACAGAAACAGATACTCATGAAGAAAACAAACCAGCCCTAATTTCCCTTTGTTGCTCACACTGCTCTTaGTGCACAATCATTTATCAT | + |
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Preference number: 2 (lower is better) Translates to: ATETDTHEENKPALISLCCSHCS*CTIIYH Trigger: ATGATAAATGATTGTGCATCAAGAGCAGTGTGAGCA...ACAAAGGGAAATTAGGGCTGGTTTGTTTTCTTCATGAGTATCTGTTTCTGTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGGAGAAAAGAGGCAGATTGTATGTAATTACAACTGGCTCAATAGCCCATGTTTTAGAGAGGGAGTATaGCCAAAGTTCTTATTGATG | + |
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Preference number: 2 (lower is better) Translates to: CGEKRQIVCNYNWLNSPCFREGV*PKFLLM Trigger: CATCAATAAGAACTTTGGGCATACTCCCTCTCTAAA...ACATGGGCTATTGAGCCAGTTGTAATTACATACAATCTGCCTCTTTTCTCCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGGAGAAAAGAGGCAGATTGTATGTAATTACAACTGGCTCAATAGCCCATGTGCCTTTATTTTCCAATaGTTAGGCATAACTGGACAA | + |
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Preference number: 2 (lower is better) Translates to: CGEKRQIVCNYNWLNSPCAFIFQ*LGITGQ Trigger: TTGTCCAGTTATGCCTAAGCATTGGAAAATAAAGGC...ACATGGGCTATTGAGCCAGTTGTAATTACATACAATCTGCCTCTTTTCTCCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
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| 3UTR-3UTR GCA 90 bp | TTATGTGGAGAAAAGAGGCAGATTGTATGTAATTACAACTGGCTCAATAGCCCAACTCTGCCTATGCTGTaGTACCCAAAATATTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: LCGEKRQIVCNYNWLNSPTLPML*YPKYSS Trigger: TGAAGAATATTTTGGGTAGCACAGCATAGGCAGAGT...TGGGCTATTGAGCCAGTTGTAATTACATACAATCTGCCTCTTTTCTCCACATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAAAGATAAATACAGCATCCTGTATAGTGTTTGTGTCAGATATCTTCCACAGACCAACCATTTTCCTTaGCTCCTTATCCAAAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: SKDKYSILYSVCVRYLPQTNHFP*LLIQSL Trigger: AAGACTTTGGATAAGGAGTCAAGGAAAATGGTTGGT...CTGTGGAAGATATCTGACACAAACACTATACAGGATGCTGTATTTATCTTTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAAAGATAAATACAGCATCCTGTATAGTGTTTGTGTCAGATATCTTCCACAGACTCATTCACTAGGTTaGAACTTCAGGCATTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: SKDKYSILYSVCVRYLPQTHSLG*NFRHFL Trigger: GAGAAAATGCCTGAAGTTTCAACCTAGTGAATGAGT...CTGTGGAAGATATCTGACACAAACACTATACAGGATGCTGTATTTATCTTTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR-3UTR GCA 90 bp | TATGCTACAGAAACAGATACTCATGAAGAAAACAAACCAGCCCTAATTTCCCTTTCCCAGCCTTCCTTTTaGTCAGAAAATGAATTGATG | + |
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Preference number: 2 (lower is better) Translates to: YATETDTHEENKPALISLSQPSF*SENELM Trigger: CATCAATTCATTTTCTGAGCAAAAGGAAGGCTGGGA...AAGGGAAATTAGGGCTGGTTTGTTTTCTTCATGAGTATCTGTTTCTGTAGCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
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| 3UTR-3UTR CCA 90 bp | TATGCTACAGAAACAGATACTCATGAAGAAAACAAACCAGCCCTAATTTCCCTTATGCTTAGGCATAACTaGACAAAGAATAGCTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: YATETDTHEENKPALISLMLRHN*TKNSLL Trigger: GAGCAAGCTATTCTTTGTCCAGTTATGCCTAAGCAT...AAGGGAAATTAGGGCTGGTTTGTTTTCTTCATGAGTATCTGTTTCTGTAGCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAAAGATAAATACAGCATCCTGTATAGTGTTTGTGTCAGATATCTTCCACAGCATTCTCACCATGATTaGCAGTATCACTTAGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: SKDKYSILYSVCVRYLPQHSHHD*QYHLEV Trigger: AACTTCTAAGTGATACTGTCAATCATGGTGAGAATG...CTGTGGAAGATATCTGACACAAACACTATACAGGATGCTGTATTTATCTTTGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAAAGATAAATACAGCATCCTGTATAGTGTTTGTGTCAGATATCTTCCACAGTATTACACAGAAGCATaGAGATATGCAGATACACTC | + |
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Preference number: 2 (lower is better) Translates to: SKDKYSILYSVCVRYLPQYYTEA*RYADTL Trigger: GAGTGTATCTGCATATCTCCATGCTTCTGTGTAATA...CTGTGGAAGATATCTGACACAAACACTATACAGGATGCTGTATTTATCTTTGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR-3UTR GCA 90 bp | TATGCTACAGAAACAGATACTCATGAAGAAAACAAACCAGCCCTAATTTCCCTTTCCATTTCTGTCTCTTaGTGTATTTGTTACCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: YATETDTHEENKPALISLSISVS*CICYQE Trigger: TTCTTGGTAACAAATACAGCAAGAGACAGAAATGGA...AAGGGAAATTAGGGCTGGTTTGTTTTCTTCATGAGTATCTGTTTCTGTAGCATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
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| 3UTR CCA 72 bp | ACAGCCTTCAGGGAGCATGCTGGAGTAAGGGGTCTATaGAGCCAAAGAGTACACACTGATCACTACCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: TAFREHAGVRGL*SQRVHTDHYPG Trigger: GCCAGGGTAGTGATCAGTGTGTACTCTTTGGCTCCATAGACCCCTTACTCCAGCATGCTCCCTGAAGGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR CCA 72 bp | GAGAGACTGGTGCTGTCCATTCCCTCCTGTGTTTCTTaGGATGTTGCTGGCTCCTTTCTAGAGGTCAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: ERLVLSIPSCVS*DVAGSFLEVSV Trigger: GACACTGACCTCTAGAAAGGAGCCAGCAACATCCCAAGAAACACAGGAGGGAATGGACAGCACCAGTCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR TCA 72 bp | TGGAGTAAGGGGTCTATGGAGCCAAAGAGTACACACTaGTCACTACCCTGGCCTGATGGCCTTAGAACACAG | + |
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Preference number: 3 (lower is better) Translates to: WSKGSMEPKSTH*SLPWPDGLRTQ Trigger: CTGTGTTCTAAGGCCATCAGGCCAGGGTAGTGATCAGTGTGTACTCTTTGGCTCCATAGACCCCTTACTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGAGTGTGTCATTAACTGTGGAATAAGTGAGAGATTGGCTAGGGCTCACACTGGGCCATCAACACTTTaGGGAGGAGCAGCTCTTAGC | + |
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Preference number: 3 (lower is better) Translates to: TECVINCGISERLARAHTGPSTL*GGAALS Trigger: GCTAAGAGCTGCTCCTCCCAAAAGTGTTGATGGCCC...AGTGTGAGCCCTAGCCAATCTCTCACTTATTCCACAGTTAATGACACACTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR GCA 72 bp | CACACTACTCCCCTTGGGAAAATGCTGAATGGAGGATaGTCTATCCCTTCTTTGAATCAGCCTGCGAATTCC | + |
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Preference number: 3 (lower is better) Translates to: HTTPLGKMLNGG*SIPSLNQPANS Trigger: GGAATTCGCAGGCTGATTCAAAGAAGGGATAGAGCATCCTCCATTCAGCATTTTCCCAAGGGGAGTAGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR-3UTR CAA 90 bp | CCCTTCTTTGAATCAGCCTGCGAATTCCCTGTGAATATAGTGCATATTCTGGGCCGCTGCACTGCTCAGTaGTATTACACAGAAGCATGG | + |
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Preference number: 3 (lower is better) Translates to: PFFESACEFPVNIVHILGRCTAQ*YYTEAW Trigger: CCATGCTTCTGTGTAATACAACTGAGCAGTGCAGCG...GCCCAGAATATGCACTATATTCACAGGGAATTCGCAGGCTGATTCAAAGAAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR-3UTR CAA 90 bp | CCCTTCTTTGAATCAGCCTGCGAATTCCCTGTGAATATAGTGCATATTCTGGGCGAAGGTCACCAGCCATaGCCTTTAAACCCTTTTCCA | + |
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Preference number: 3 (lower is better) Translates to: PFFESACEFPVNIVHILGEGHQP*PLNPFP Trigger: TGGAAAAGGGTTTAAAGGCAATGGCTGGTGACCTTC...GCCCAGAATATGCACTATATTCACAGGGAATTCGCAGGCTGATTCAAAGAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR GCA 72 bp | AACTTGGTTCCCTGTCATCAGTTTCATAGACGCCGCTaGACTGCTCAGTTGTATTACACAGAAGCATGGAGA | + |
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Preference number: 3 (lower is better) Translates to: NLVPCHQFHRRR*TAQLYYTEAWR Trigger: TCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCAGCGGCGTCTATGAAACTGATGACAGGGAACCAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR GCA 72 bp | CTTTTCCAACACAGTTGGAGCTTCTGGATCTCGATGTaGGCAACTTGGTTCCCTGTCATCAGTTTCATAGAC | + |
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Preference number: 3 (lower is better) Translates to: LFQHSWSFWISM*ATWFPVISFID Trigger: GTCTATGAAACTGATGACAGGGAACCAAGTTGCGCACATCGAGATCCAGAAGCTCCAACTGTGTTGGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR GCA 72 bp | CACTTATTTGCATTGACTTACAGCCTTCAGGGAGCATaGTGGAGTAAGGGGTCTATGGAGCCAAAGAGTACA | + |
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Preference number: 3 (lower is better) Translates to: HLFALTYSLQGA*WSKGSMEPKST Trigger: TGTACTCTTTGGCTCCATAGACCCCTTACTCCAGCATGCTCCCTGAAGGCTGTAAGTCAATGCAAATAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR CCA 72 bp | TTATTTGCATTGACTTACAGCCTTCAGGGAGCATGCTaGAGTAAGGGGTCTATGGAGCCAAAGAGTACACAC | + |
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Preference number: 3 (lower is better) Translates to: LFALTYSLQGAC*SKGSMEPKSTH Trigger: GTGTGTACTCTTTGGCTCCATAGACCCCTTACTCCAGCATGCTCCCTGAAGGCTGTAAGTCAATGCAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR TCA 72 bp | AAGCCAGTCAGTGTGCAAACATGGGCAGGCTGCTACTaGATGAGTTTAATCCAAAGTTTCAGAAAGCTGCGT | + |
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Preference number: 3 (lower is better) Translates to: KPVSVQTWAGCY*MSLIQSFRKLR Trigger: ACGCAGCTTTCTGAAACTTTGGATTAAACTCATTCAGTAGCAGCCTGCCCATGTTTGCACACTGACTGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| 3UTR-3UTR CAA 90 bp | GCCGCTGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACATCCATTTCTGTCTCTaGCTGTATTTGTTACCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: AAALLSCITQKHGDMQIHIHFCL*LYLLPR Trigger: TCTTGGTAACAAATACAGCAAGAGACAGAAATGGAT...GTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCAGCGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| 3UTR TCA 72 bp | CTAAGAATGGCAATTGGTACAATCACTTATTTGCATTaGCTTACAGCCTTCAGGGAGCATGCTGGAGTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LRMAIGTITYLH*LTAFREHAGVR Trigger: CCTTACTCCAGCATGCTCCCTGAAGGCTGTAAGTCAATGCAAATAAGTGATTGTACCAATTGCCATTCTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGAATCAGCCTGCGAATTCCCTGTGAATATAGTGCATATTCTGGGCTTTGACTTGTTTCATTTCTTTTaGCTGCCAGAGGTGAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: FESACEFPVNIVHILGFDLFHFF*LPEVRT Trigger: GGTTCTCACCTCTGGCAGCAAAAAGAAATGAAACAA...GTCAAAGCCCAGAATATGCACTATATTCACAGGGAATTCGCAGGCTGATTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGAATCAGCCTGCGAATTCCCTGTGAATATAGTGCATATTCTGGGCTTTGACACTATTTCGTGGCACTaGCTCAATGAATGCTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: FESACEFPVNIVHILGFDTISWH*LNECFL Trigger: TAGGAAGCATTCATTGAGCAAGTGCCACGAAATAGT...GTCAAAGCCCAGAATATGCACTATATTCACAGGGAATTCGCAGGCTGATTCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGCTACAGAAACAGATACTCATGAAGAAAACAAACCAGCCCTAATTTCCCTTCTCATGTACCAACTGTaGATGTCACTCGCAGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: YATETDTHEENKPALISLLMYQL*MSLAER Trigger: CCTTTCTGCGAGTGACATCAACAGTTGGTACATGAG...AAGGGAAATTAGGGCTGGTTTGTTTTCTTCATGAGTATCTGTTTCTGTAGCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| 3UTR-3UTR CAA 90 bp | GATATCACCAAAACTGGATGTTTTTCTCACAGCAGAGTTGATGATAGCAGGCAGCACTCATTCACTAGGTaGAAACTTCAGGCATTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: DITKTGCFSHSRVDDSRQHSFTR*KLQAFS Trigger: AGAAAATGCCTGAAGTTTCAACCTAGTGAATGAGTG...CTGCCTGCTATCATCAACTCTGCTGTGAGAAAAACATCCAGTTTTGGTGATATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| 3UTR-3UTR CAA 90 bp | CATATTAAGACCCTGACTGCCTCTCTAACTCATGTACCAACTGTTGATGTCACTATCCATTTCTGTCTCTaGCTGTATTTGTTACCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HIKTLTASLTHVPTVDVTIHFCL*LYLLPR Trigger: TCTTGGTAACAAATACAGCAAGAGACAGAAATGGAT...AGTGACATCAACAGTTGGTACATGAGTTAGAGAGGCAGTCAGGGTCTTAATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| 3UTR TCA 72 bp | GGCGCATTTGTTGACTATTTCGTGGCACTTGCTCAATaGATGCTTCCTAGACATATTTTGGAAGCTGATAAA | + |
|
Preference number: 3 (lower is better) Translates to: GAFVDYFVALAQ*MLPRHILEADK Trigger: TTTATCAGCTTCCAAAATATGTCTAGGAAGCATTCATTGAGCAAGTGCCACGAAATAGTCAACAAATGCGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| 3UTR GCA 72 bp | TATTTTCTCATTAGAGAATCACAGGTATGCGTTTCATaGATCATAAACTGTCAGCAGGCCAAACACTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: YFLIRESQVCVS*IINCQQAKHLE Trigger: CTCCAAGTGTTTGGCCTGCTGACAGTTTATGATGCATGAAACGCATACCTGTGATTCTCTAATGAGAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| 3UTR CCA 72 bp | CTTAGTAGCCTTTATTTTCCAATGCTTAGGCATAACTaGACAAAGAATAGCTTGCTCACACTGCTCTTGATG | + |
|
Preference number: 3 (lower is better) Translates to: LSSLYFPMLRHN*TKNSLLTLLLM Trigger: CATCAAGAGCAGTGTGAGCAAGCTATTCTTTGTCCAGTTATGCCTAAGCATTGGAAAATAAAGGCTACTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTATCCATTTCTGTCTCTaGCTGTATTTGTTACCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: CTAQLYYTEAWRYADTLIIHFCL*LYLLPR Trigger: TCTTGGTAACAAATACAGCAAGAGACAGAAATGGAT...AATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCTTTCATACTAACATTTAAGTGTTGGAAAGCTGAAAACAGGTACCTGAGATTGCTCACACTGCTCTaGATGCACAATCATTTATCA | + |
|
Preference number: 3 (lower is better) Translates to: QAFILTFKCWKAENRYLRLLTLL*MHNHLS Trigger: TGATAAATGATTGTGCATCAAGAGCAGTGTGAGCAA...TCTCAGGTACCTGTTTTCAGCTTTCCAACACTTAAATGTTAGTATGAAAGCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| 3UTR-3UTR CAA 90 bp | TTATGTGGAGAAAAGAGGCAGATTGTATGTAATTACAACTGGCTCAATAGCCCAAGCCCTAATTTCCCTTaGTCTTCACAAGATTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LCGEKRQIVCNYNWLNSPSPNFP*SSQDLL Trigger: CAACAAATCTTGTGAAGACAAAGGGAAATTAGGGCT...TGGGCTATTGAGCCAGTTGTAATTACATACAATCTGCCTCTTTTCTCCACATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| 3UTR-3UTR CAA 90 bp | TTATGTGGAGAAAAGAGGCAGATTGTATGTAATTACAACTGGCTCAATAGCCCAATTTTCTGGAGTTTTTaGTGGAGTAGAGCATTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LCGEKRQIVCNYNWLNSPIFWSF*WSRAFH Trigger: ATGGAATGCTCTACTCCACAAAAAACTCCAGAAAAT...TGGGCTATTGAGCCAGTTGTAATTACATACAATCTGCCTCTTTTCTCCACATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| 3UTR TCA 72 bp | AACACAGATATCCCAGCCTTCCTTTTGCTCAGAAAATaGATTGATGTCATGTTTAGAAGAATAGGTACCATG | + |
|
Preference number: 3 (lower is better) Translates to: NTDIPAFLLLRK*IDVMFRRIGTM Trigger: CATGGTACCTATTCTTCTAAACATGACATCAATTCATTTTCTGAGCAAAAGGAAGGCTGGGATATCTGTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| 3UTR GCA 72 bp | CTGAGTATTTTCATGAAATTGATGTACATGCTACTCTaGCTATGCTGTGCTACCCAAAATATTCTTCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LSIFMKLMYMLL*LCCATQNILQN Trigger: ATTCTGAAGAATATTTTGGGTAGCACAGCATAGGCAGAGTAGCATGTACATCAATTTCATGAAAATACTCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| 3UTR GCA 72 bp | CATTTGTTGACTATTTCGTGGCACTTGCTCAATGAATaGTTCCTAGACATATTTTGGAAGCTGATAAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: HLLTISWHLLNE*FLDIFWKLIKT Trigger: AGTTTTTATCAGCTTCCAAAATATGTCTAGGAAGCATTCATTGAGCAAGTGCCACGAAATAGTCAACAAATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| 3UTR TCA 72 bp | GTTACTGAATCTTTGAGTGAACATTCTCACCATGATTaGCAGTATCACTTAGAAGTTGGTAGATTTATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VTESLSEHSHHD*QYHLEVGRFIQ Trigger: CTGAATAAATCTACCAACTTCTAAGTGATACTGTCAATCATGGTGAGAATGTTCACTCAAAGATTCAGTAAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| CDS-3UTR TCA 90 bp | GCCGCTGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACCAGACACGGGCAGGCTaGGGGACCTGGGGCGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: AAALLSCITQKHGDMQIHQTRAG*GTWGEL Trigger: AAGTTCGCCCCAGGTCCCTCAGCCTGCCCGTGTCTG...GTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCAGCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | GCCGCTGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTTCTCCTGGCCGGGTTaGTCAGGAGCTTGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AAALLSCITQKHGDMQIHFSWPG*SGAWAS Trigger: GCTGGCCCAAGCTCCTGAGCAACCCGGCCAGGAGAA...GTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCAGCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR TCA 90 bp | ACAGAGTGTGTCATTAACTGTGGAATAAGTGAGAGATTGGCTAGGGCTCACACTCAGACACGGGCAGGCTaGGGGACCTGGGGCGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: TECVINCGISERLARAHTQTRAG*GTWGEL Trigger: AAGTTCGCCCCAGGTCCCTCAGCCTGCCCGTGTCTG...AGTGTGAGCCCTAGCCAATCTCTCACTTATTCCACAGTTAATGACACACTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| CDS-3UTR TCA 90 bp | GCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTCTGGATGCAGCGCGGGTaGAGCCGTGGGCACTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALLSCITQKHGDMQIHSFWMQRG*SRGHSG Trigger: GCCAGAGTGCCCACGGCTTCACCCGCGCTGCATCCA...GAATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | GCCGCTGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACGCTTCTCCAGCGGGATaGTCGGACTGCACAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AAALLSCITQKHGDMQIHASPAG*SDCTEP Trigger: TGGCTCTGTGCAGTCCGAGCATCCCGCTGGAGAAGC...GTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCAGCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTCTCCAGTCCCGGGCACTaGTGCCCTCGTCCCTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALLSCITQKHGDMQIHSFSSPGH*CPRPSR Trigger: CCTCGAGGGACGAGGGCAGCAGTGCCCGGGACTGGA...GAATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | GATATCACCAAAACTGGATGTTTTTCTCACAGCAGAGTTGATGATAGCAGGCAGTCCAGTCCCGGGCACTaGTGCCCTCGTCCCTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DITKTGCFSHSRVDDSRQSSPGH*CPRPSR Trigger: CCTCGAGGGACGAGGGCAGCAGTGCCCGGGACTGGA...CTGCCTGCTATCATCAACTCTGCTGTGAGAAAAACATCCAGTTTTGGTGATATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| CDS-3UTR CCA 90 bp | TGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTAGGCTGATAGCTTCCTaGGCGGCGGCCGGGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CTAQLYYTEAWRYADTLIRLIAS*AAAGGS Trigger: GGAGCCCCCGGCCGCCGCCCAGGAAGCTATCAGCCT...AATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR TCA 90 bp | CATATTAAGACCCTGACTGCCTCTCTAACTCATGTACCAACTGTTGATGTCACTCAGACACGGGCAGGCTaGGGGACCTGGGGCGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: HIKTLTASLTHVPTVDVTQTRAG*GTWGEL Trigger: AAGTTCGCCCCAGGTCCCTCAGCCTGCCCGTGTCTG...AGTGACATCAACAGTTGGTACATGAGTTAGAGAGGCAGTCAGGGTCTTAATATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS-3UTR GCA 90 bp | TGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTAGGCCTGCTTCTGCTTaGTCCACGCCTCCCGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CTAQLYYTEAWRYADTLIRPASA*STPPGP Trigger: CGGGCCGGGAGGCGTGGAGCAAGCAGAAGCAGGCCT...AATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGTCATTCAATAATTACTGAAATTCTTGTATACTGGCAGGGTTTGGGGGTAAGGCCTGCTTCTGCTTaGTCCACGCCTCCCGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GCHSIITEILVYWQGLGVRPASA*STPPGP Trigger: CGGGCCGGGAGGCGTGGAGCAAGCAGAAGCAGGCCT...TACCCCCAAACCCTGCCAGTATACAAGAATTTCAGTAATTATTGAATGACAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTCTGGGCAGCCCAGGCCTaGTTCTGCTTGCTCCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALLSCITQKHGDMQIHSFWAAQA*FCLLHA Trigger: GGCGTGGAGCAAGCAGAAGCAGGCCTGGGCTGCCCA...GAATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCTTTCATACTAACATTTAAGTGTTGGAAAGCTGAAAACAGGTACCTGAGAAGGCTGATAGCTTCCTaGGCGGCGGCCGGGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QAFILTFKCWKAENRYLRRLIAS*AAAGGS Trigger: GGAGCCCCCGGCCGCCGCCCAGGAAGCTATCAGCCT...TCTCAGGTACCTGTTTTCAGCTTTCCAACACTTAAATGTTAGTATGAAAGCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS-3UTR CCA 90 bp | GCCGCTGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACCACTGCGGACAGCACTaGCTGTTGTCGACGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: AAALLSCITQKHGDMQIHHCGQH*LLSTWM Trigger: CATCCACGTCGACAACAGCCAGTGCTGTCCGCAGTG...GTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCAGCGGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCTTTCATACTAACATTTAAGTGTTGGAAAGCTGAAAACAGGTACCTGAGATGGATGCAGCGCGGGTaGAGCCGTGGGCACTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QAFILTFKCWKAENRYLRWMQRG*SRGHSG Trigger: GCCAGAGTGCCCACGGCTTCACCCGCGCTGCATCCA...TCTCAGGTACCTGTTTTCAGCTTTCCAACACTTAAATGTTAGTATGAAAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTCGGAGAGCGCGCCAACTaGCATCGCAGAGGAGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALLSCITQKHGDMQIHSFGERAN*HRRGAR Trigger: CCTAGCTCCTCTGCGATGGCAGTTGGCGCGCTCTCC...GAATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | TTTGAATCAGCCTGCGAATTCCCTGTGAATATAGTGCATATTCTGGGCTTTGACGGAGAGCGCGCCAACTaGCATCGCAGAGGAGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: FESACEFPVNIVHILGFDGERAN*HRRGAR Trigger: CCTAGCTCCTCTGCGATGGCAGTTGGCGCGCTCTCC...GTCAAAGCCCAGAATATGCACTATATTCACAGGGAATTCGCAGGCTGATTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTCTTCTCCTGGCCGGGTTaGTCAGGAGCTTGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALLSCITQKHGDMQIHSFFSWPG*SGAWAS Trigger: GCTGGCCCAAGCTCCTGAGCAACCCGGCCAGGAGAA...GAATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCTTTCATACTAACATTTAAGTGTTGGAAAGCTGAAAACAGGTACCTGAGATCCAGTCCCGGGCACTaGTGCCCTCGTCCCTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QAFILTFKCWKAENRYLRSSPGH*CPRPSR Trigger: CCTCGAGGGACGAGGGCAGCAGTGCCCGGGACTGGA...TCTCAGGTACCTGTTTTCAGCTTTCCAACACTTAAATGTTAGTATGAAAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS-3UTR GCA 90 bp | TGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTTGGGCAGCCCAGGCCTaGTTCTGCTTGCTCCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: CTAQLYYTEAWRYADTLIWAAQA*FCLLHA Trigger: GGCGTGGAGCAAGCAGAAGCAGGCCTGGGCTGCCCA...AATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTCGGTTGCTCAGGAGCTTaGGCCAGCTTCTCCAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALLSCITQKHGDMQIHSFGCSGA*ASFSSG Trigger: CCCGCTGGAGAAGCTGGCCCAAGCTCCTGAGCAACC...GAATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGAGAAAAGAGGCAGATTGTATGTAATTACAACTGGCTCAATAGCCCATGTTTCTCCTGGCCGGGTTaGTCAGGAGCTTGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CGEKRQIVCNYNWLNSPCFSWPG*SGAWAS Trigger: GCTGGCCCAAGCTCCTGAGCAACCCGGCCAGGAGAA...ACATGGGCTATTGAGCCAGTTGTAATTACATACAATCTGCCTCTTTTCTCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCTTTCATACTAACATTTAAGTGTTGGAAAGCTGAAAACAGGTACCTGAGATGGGCAGCCCAGGCCTaGTTCTGCTTGCTCCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: QAFILTFKCWKAENRYLRWAAQA*FCLLHA Trigger: GGCGTGGAGCAAGCAGAAGCAGGCCTGGGCTGCCCA...TCTCAGGTACCTGTTTTCAGCTTTCCAACACTTAAATGTTAGTATGAAAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTCTGTTGTCGACGTGGATaGAGCGCGGGTGAAGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALLSCITQKHGDMQIHSFCCRRG*SAGEAV Trigger: CACGGCTTCACCCGCGCTGCATCCACGTCGACAACA...GAATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | CATATTAAGACCCTGACTGCCTCTCTAACTCATGTACCAACTGTTGATGTCACTTGTTGTCGACGTGGATaGAGCGCGGGTGAAGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: HIKTLTASLTHVPTVDVTCCRRG*SAGEAV Trigger: CACGGCTTCACCCGCGCTGCATCCACGTCGACAACA...AGTGACATCAACAGTTGGTACATGAGTTAGAGAGGCAGTCAGGGTCTTAATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS-3UTR GCA 90 bp | GATATCACCAAAACTGGATGTTTTTCTCACAGCAGAGTTGATGATAGCAGGCAGTGTTGTCGACGTGGATaGAGCGCGGGTGAAGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: DITKTGCFSHSRVDDSRQCCRRG*SAGEAV Trigger: CACGGCTTCACCCGCGCTGCATCCACGTCGACAACA...CTGCCTGCTATCATCAACTCTGCTGTGAGAAAAACATCCAGTTTTGGTGATATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | GCCGCTGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACCTCGTGCACATGGCTTaGCGTTCAATTCTCCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: AAALLSCITQKHGDMQIHLVHMA*RSILHV Trigger: CACGTGGAGAATTGAACGGCAAGCCATGTGCACGAG...GTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCAGCGGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGAGAAAAGAGGCAGATTGTATGTAATTACAACTGGCTCAATAGCCCATGTGGTTGCTCAGGAGCTTaGGCCAGCTTCTCCAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: CGEKRQIVCNYNWLNSPCGCSGA*ASFSSG Trigger: CCCGCTGGAGAAGCTGGCCCAAGCTCCTGAGCAACC...ACATGGGCTATTGAGCCAGTTGTAATTACATACAATCTGCCTCTTTTCTCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS-3UTR CCA 90 bp | GCCGCTGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACACAGCACTTCACCATTaGCTTCACAGCGGCACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: AAALLSCITQKHGDMQIHTALHH*LHSGTV Trigger: AACGGTGCCGCTGTGAAGCCAATGGTGAAGTGCTGT...GTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCAGCGGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR CCA 90 bp | GCCGCTGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACCACCTCTCTACCAGCTaGGATTACAGCGGTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AAALLSCITQKHGDMQIHHLSTS*DYSGFC Trigger: GCAGAAACCGCTGTAATCCCAGCTGGTAGAGAGGTG...GTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCAGCGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTAGACATATTTTGGAAGCTGATAAAAACTTTGAGAGACAAGGCTGAGGGAGGTTGCTCAGGAGCTTaGGCCAGCTTCTCCAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLDIFWKLIKTLRDKAEGGCSGA*ASFSSG Trigger: CCCGCTGGAGAAGCTGGCCCAAGCTCCTGAGCAACC...TCCCTCAGCCTTGTCTCTCAAAGTTTTTATCAGCTTCCAAAATATGTCTAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTCCACTGCGGACAGCACTaGCTGTTGTCGACGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: ALLSCITQKHGDMQIHSFHCGQH*LLSTWM Trigger: CATCCACGTCGACAACAGCCAGTGCTGTCCGCAGTG...GAATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | TATGCTACAGAAACAGATACTCATGAAGAAAACAAACCAGCCCTAATTTCCCTTGGAGAGCGCGCCAACTaGCATCGCAGAGGAGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: YATETDTHEENKPALISLGERAN*HRRGAR Trigger: CCTAGCTCCTCTGCGATGGCAGTTGGCGCGCTCTCC...AAGGGAAATTAGGGCTGGTTTGTTTTCTTCATGAGTATCTGTTTCTGTAGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS-3UTR GCA 90 bp | GGATGTTGCTGGCTCCTTTCTAGAGGTCAGTGTCTAAACATGAATGAGAAGACTTTCTTCTCCTTGCACTaGGGACAGCACTGGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GCCWLLSRGQCLNMNEKTFFSLH*GQHWLL Trigger: CAACAGCCAGTGCTGTCCGCAGTGCAAGGAGAAGAA...AGTCTTCTCATTCATGTTTAGACACTGACCTCTAGAAAGGAGCCAGCAACATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTCGACACGCCGACACTGTaGACAGCACTTCACCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALLSCITQKHGDMQIHSFDTPTL*TALHHW Trigger: CCAATGGTGAAGTGCTGTGCACAGTGTCGGCGTGTC...GAATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | GCCGCTGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACAGTTTGGACCGTTTTTaGAGATCGGGCAGCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AAALLSCITQKHGDMQIHSLDRF*RSGSTD Trigger: ATCAGTGCTGCCCGATCTGCAAAAACGGTCCAAACT...GTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCAGCGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | GCCGCTGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTGCAGTGACATATGGTaGACTCGTCAGTCTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: AAALLSCITQKHGDMQIHCSDIW*TRQSSP Trigger: AGGTGAAGACTGACGAGTGCACCATATGTCACTGCA...GTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCAGCGGC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | TATGCTACAGAAACAGATACTCATGAAGAAAACAAACCAGCCCTAATTTCCCTTGCTTCTCCAGCGGGATaGTCGGACTGCACAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YATETDTHEENKPALISLASPAG*SDCTEP Trigger: TGGCTCTGTGCAGTCCGAGCATCCCGCTGGAGAAGC...AAGGGAAATTAGGGCTGGTTTGTTTTCTTCATGAGTATCTGTTTCTGTAGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTCTTCTTCTCCTTGCACTaGGGACAGCACTGGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ALLSCITQKHGDMQIHSFFFSLH*GQHWLL Trigger: CAACAGCCAGTGCTGTCCGCAGTGCAAGGAGAAGAA...GAATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | GCCGCTGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACGATTACAGCGGTTTCTaGAAAGCAGTTTGGACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: AAALLSCITQKHGDMQIHDYSGF*KAVWTV Trigger: AACGGTCCAAACTGCTTTGCAGAAACCGCTGTAATC...GTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCAGCGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | TGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTAAGTCTGGTAGGTCTTaGCCCGGAACTCGCAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: CTAQLYYTEAWRYADTLIKSGRS*PGTRSS Trigger: ACTACTGCGAGTTCCGGGGCAAGACCTACCAGACTT...AATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGAGAAAAGAGGCAGATTGTATGTAATTACAACTGGCTCAATAGCCCATGTAAGTCTGGTAGGTCTTaGCCCGGAACTCGCAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: CGEKRQIVCNYNWLNSPCKSGRS*PGTRSS Trigger: ACTACTGCGAGTTCCGGGGCAAGACCTACCAGACTT...ACATGGGCTATTGAGCCAGTTGTAATTACATACAATCTGCCTCTTTTCTCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS-3UTR GCA 90 bp | TTATGTGGAGAAAAGAGGCAGATTGTATGTAATTACAACTGGCTCAATAGCCCAGACACGCCGACACTGTaGACAGCACTTCACCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCGEKRQIVCNYNWLNSPDTPTL*TALHHW Trigger: CCAATGGTGAAGTGCTGTGCACAGTGTCGGCGTGTC...TGGGCTATTGAGCCAGTTGTAATTACATACAATCTGCCTCTTTTCTCCACATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS-3UTR GCA 90 bp | TGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTCTCGTGCACATGGCTTaGCGTTCAATTCTCCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: CTAQLYYTEAWRYADTLILVHMA*RSILHV Trigger: CACGTGGAGAATTGAACGGCAAGCCATGTGCACGAG...AATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | GATATCACCAAAACTGGATGTTTTTCTCACAGCAGAGTTGATGATAGCAGGCAGTGCACTCATGTCTCGTaGACATGGCTTGCCGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: DITKTGCFSHSRVDDSRQCTHVS*TWLAVQ Trigger: TTGAACGGCAAGCCATGTGCACGAGACATGAGTGCA...CTGCCTGCTATCATCAACTCTGCTGTGAGAAAAACATCCAGTTTTGGTGATATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| CDS-3UTR CCA 90 bp | TATGCTACAGAAACAGATACTCATGAAGAAAACAAACCAGCCCTAATTTCCCTTCACTGCGGACAGCACTaGCTGTTGTCGACGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: YATETDTHEENKPALISLHCGQH*LLSTWM Trigger: CATCCACGTCGACAACAGCCAGTGCTGTCCGCAGTG...AAGGGAAATTAGGGCTGGTTTGTTTTCTTCATGAGTATCTGTTTCTGTAGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGAGAAAAGAGGCAGATTGTATGTAATTACAACTGGCTCAATAGCCCATGTCACCTCTCTACCAGCTaGGATTACAGCGGTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CGEKRQIVCNYNWLNSPCHLSTS*DYSGFC Trigger: GCAGAAACCGCTGTAATCCCAGCTGGTAGAGAGGTG...ACATGGGCTATTGAGCCAGTTGTAATTACATACAATCTGCCTCTTTTCTCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| 3UTR CAA 72 bp | AGTGAGGTTTGCCATTGTGATGAAGGTCACCAGCCATaGCCTTTAAACCCTTTTCCAACACAGTTGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SEVCHCDEGHQP*PLNPFPTQLEL Trigger: AAGCTCCAACTGTGTTGGAAAAGGGTTTAAAGGCAATGGCTGGTGACCTTCATCACAATGGCAAACCTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| 3UTR CAA 72 bp | CCCCCACAGGCGCATTTGTTGACTATTTCGTGGCACTaGCTCAATGAATGCTTCCTAGACATATTTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PPQAHLLTISWH*LNECFLDIFWK Trigger: CTTCCAAAATATGTCTAGGAAGCATTCATTGAGCAAGTGCCACGAAATAGTCAACAAATGCGCCTGTGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| 3UTR CAA 72 bp | ACAGAGTGTGTCATTAACTGTGGAATAAGTGAGAGATaGGCTAGGGCTCACACTACTCCCCTTGGGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: TECVINCGISER*ARAHTTPLGKM Trigger: CATTTTCCCAAGGGGAGTAGTGTGAGCCCTAGCCAATCTCTCACTTATTCCACAGTTAATGACACACTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | TTATGTGGAGAAAAGAGGCAGATTGTATGTAATTACAACTGGCTCAATAGCCCATTCTTCTCCTTGCACTaGGGACAGCACTGGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LCGEKRQIVCNYNWLNSPFFSLH*GQHWLL Trigger: CAACAGCCAGTGCTGTCCGCAGTGCAAGGAGAAGAA...TGGGCTATTGAGCCAGTTGTAATTACATACAATCTGCCTCTTTTCTCCACATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAAGATAAATACAGCATCCTGTATAGTGTTTGTGTCAGATATCTTCCACAGGACACGCCGACACTGTaGACAGCACTTCACCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKDKYSILYSVCVRYLPQDTPTL*TALHHW Trigger: CCAATGGTGAAGTGCTGTGCACAGTGTCGGCGTGTC...CTGTGGAAGATATCTGACACAAACACTATACAGGATGCTGTATTTATCTTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | TTTGAATCAGCCTGCGAATTCCCTGTGAATATAGTGCATATTCTGGGCTTTGACAGTTTGGACCGTTTTTaGAGATCGGGCAGCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FESACEFPVNIVHILGFDSLDRF*RSGSTD Trigger: ATCAGTGCTGCCCGATCTGCAAAAACGGTCCAAACT...GTCAAAGCCCAGAATATGCACTATATTCACAGGGAATTCGCAGGCTGATTCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | TTATGTGGAGAAAAGAGGCAGATTGTATGTAATTACAACTGGCTCAATAGCCCACTCGTGCACATGGCTTaGCGTTCAATTCTCCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCGEKRQIVCNYNWLNSPLVHMA*RSILHV Trigger: CACGTGGAGAATTGAACGGCAAGCCATGTGCACGAG...TGGGCTATTGAGCCAGTTGTAATTACATACAATCTGCCTCTTTTCTCCACATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS-3UTR GCA 90 bp | TGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTTGCACTCATGTCTCGTaGACATGGCTTGCCGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CTAQLYYTEAWRYADTLICTHVS*TWLAVQ Trigger: TTGAACGGCAAGCCATGTGCACGAGACATGAGTGCA...AATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
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| CDS-3UTR CCA 90 bp | TTCCTAGACATATTTTGGAAGCTGATAAAAACTTTGAGAGACAAGGCTGAGGGAACAGCACTTCACCATTaGCTTCACAGCGGCACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLDIFWKLIKTLRDKAEGTALHH*LHSGTV Trigger: AACGGTGCCGCTGTGAAGCCAATGGTGAAGTGCTGT...TCCCTCAGCCTTGTCTCTCAAAGTTTTTATCAGCTTCCAAAATATGTCTAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGAGAAAAGAGGCAGATTGTATGTAATTACAACTGGCTCAATAGCCCATGTAGTTTGGACCGTTTTTaGAGATCGGGCAGCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CGEKRQIVCNYNWLNSPCSLDRF*RSGSTD Trigger: ATCAGTGCTGCCCGATCTGCAAAAACGGTCCAAACT...ACATGGGCTATTGAGCCAGTTGTAATTACATACAATCTGCCTCTTTTCTCCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS-3UTR GCA 90 bp | GCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTCGATTACAGCGGTTTCTaGAAAGCAGTTTGGACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALLSCITQKHGDMQIHSFDYSGF*KAVWTV Trigger: AACGGTCCAAACTGCTTTGCAGAAACCGCTGTAATC...GAATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR CCA 90 bp | TATGCTACAGAAACAGATACTCATGAAGAAAACAAACCAGCCCTAATTTCCCTTACAGCACTTCACCATTaGCTTCACAGCGGCACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: YATETDTHEENKPALISLTALHH*LHSGTV Trigger: AACGGTGCCGCTGTGAAGCCAATGGTGAAGTGCTGT...AAGGGAAATTAGGGCTGGTTTGTTTTCTTCATGAGTATCTGTTTCTGTAGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTCAAGTGCAGTGACATATaGTGCACTCGTCAGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALLSCITQKHGDMQIHSFKCSDI*CTRQSS Trigger: TGAAGACTGACGAGTGCACCATATGTCACTGCACTT...GAATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR CCA 90 bp | GATATCACCAAAACTGGATGTTTTTCTCACAGCAGAGTTGATGATAGCAGGCAGAAGTGCAGTGACATATaGTGCACTCGTCAGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DITKTGCFSHSRVDDSRQKCSDI*CTRQSS Trigger: TGAAGACTGACGAGTGCACCATATGTCACTGCACTT...CTGCCTGCTATCATCAACTCTGCTGTGAGAAAAACATCCAGTTTTGGTGATATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| 3UTR CAA 72 bp | GCTAAGAATGGCAATTGGTACAATCACTTATTTGCATaGACTTACAGCCTTCAGGGAGCATGCTGGAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: AKNGNWYNHLFA*TYSLQGACWSK Trigger: CTTACTCCAGCATGCTCCCTGAAGGCTGTAAGTCAATGCAAATAAGTGATTGTACCAATTGCCATTCTTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGAGAAAAGAGGCAGATTGTATGTAATTACAACTGGCTCAATAGCCCATGTGATTACAGCGGTTTCTaGAAAGCAGTTTGGACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: CGEKRQIVCNYNWLNSPCDYSGF*KAVWTV Trigger: AACGGTCCAAACTGCTTTGCAGAAACCGCTGTAATC...ACATGGGCTATTGAGCCAGTTGTAATTACATACAATCTGCCTCTTTTCTCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS-3UTR GCA 90 bp | GCTACAGAAACAGATACTCATGAAGAAAACAAACCAGCCCTAATTTCCCTTTGTTGCAGTGACATATGGTaGACTCGTCAGTCTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: ATETDTHEENKPALISLCCSDIW*TRQSSP Trigger: AGGTGAAGACTGACGAGTGCACCATATGTCACTGCA...ACAAAGGGAAATTAGGGCTGGTTTGTTTTCTTCATGAGTATCTGTTTCTGTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS-3UTR GCA 90 bp | TATGCTACAGAAACAGATACTCATGAAGAAAACAAACCAGCCCTAATTTCCCTTTGCACTCATGTCTCGTaGACATGGCTTGCCGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: YATETDTHEENKPALISLCTHVS*TWLAVQ Trigger: TTGAACGGCAAGCCATGTGCACGAGACATGAGTGCA...AAGGGAAATTAGGGCTGGTTTGTTTTCTTCATGAGTATCTGTTTCTGTAGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| 3UTR CAA 72 bp | TGCTTCCTAGACATATTTTGGAAGCTGATAAAAACTTaGAGAGACAAGGCTGAGGGAGGAAGTATGTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CFLDIFWKLIKT*RDKAEGGSMFP Trigger: AGGGAACATACTTCCTCCCTCAGCCTTGTCTCTCAAAGTTTTTATCAGCTTCCAAAATATGTCTAGGAAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAAGATAAATACAGCATCCTGTATAGTGTTTGTGTCAGATATCTTCCACAGTGCAGTGACATATGGTaGACTCGTCAGTCTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SKDKYSILYSVCVRYLPQCSDIW*TRQSSP Trigger: AGGTGAAGACTGACGAGTGCACCATATGTCACTGCA...CTGTGGAAGATATCTGACACAAACACTATACAGGATGCTGTATTTATCTTTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCTTTCATACTAACATTTAAGTGTTGGAAAGCTGAAAACAGGTACCTGAGAAAGTGCAGTGACATATaGTGCACTCGTCAGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QAFILTFKCWKAENRYLRKCSDI*CTRQSS Trigger: TGAAGACTGACGAGTGCACCATATGTCACTGCACTT...TCTCAGGTACCTGTTTTCAGCTTTCCAACACTTAAATGTTAGTATGAAAGCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| 3UTR CAA 72 bp | CATAACTGGACAAAGAATAGCTTGCTCACACTGCTCTaGATGCACAATCATTTATCATCTCACTATGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: HNWTKNSLLTLL*MHNHLSSHYVY Trigger: GTAGACATAGTGAGATGATAAATGATTGTGCATCAAGAGCAGTGTGAGCAAGCTATTCTTTGTCCAGTTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS GCA 90 bp | GCGCGCCCGAGCTCGCTCACCCGCCCCGGGCTGTCCCGAGACGCGTaGTCGCGCTTCTCCTGGCCGGGTTGCTCAGGAGCTTGGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ARPSSLTRPGLSRDA*SRFSWPGCSGAWAS Trigger: GCTGGCCCAAGCTCCTGAGCAACCCGGCCAGGAGAAGCGCGAGCACGCGTCTCGGGACAGCCCGGGGCGGGTGAGCGAGCTCGGGCGCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
||
| CDS CCA 90 bp | CCTGTGGGGTATCCCCGCGAGGCCGGACCTGCCAGTCCGCGGCCTTaGCGCTCCCGCCCTGGGCAGCCCAGGCCTGCTTCTGCTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PVGYPREAGPASPRP*RSRPGQPRPASACS Trigger: GGAGCAAGCAGAAGCAGGCCTGGGCTGCCCAGGGCGGGAGCGCCAAGGCCGCGGACTGGCAGGTCCGGCCTCGCGGGGATACCCCACAGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
||
| CDS GCA 90 bp | TCTGCTTGCTCCACGCCTCCCGGCCCGAGAGCGCGCGGCTGCCCTTaGTCTTCCAGTCCCGGGCACTGCTGCCCTCGTCCCTCGAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SACSTPPGPRARGCP*SSSPGHCCPRPSRR Trigger: GCGCCTCGAGGGACGAGGGCAGCAGTGCCCGGGACTGGAAGAGCAAGGGCAGCCGCGCGCTCTCGGGCCGGGAGGCGTGGAGCAAGCAGA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
||
| CDS TCA 90 bp | CACTGCGGACAGCACTGGCTGTTGTCGACGTGGATGCAGCGCGGGTaGAGCCGTGGGCACTCTGGCTGTGCGCAAAGGGGCCCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HCGQHWLLSTWMQRG*SRGHSGCAQRGPSS Trigger: GGAGGAGGGGCCCCTTTGCGCACAGCCAGAGTGCCCACGGCTTCACCCGCGCTGCATCCACGTCGACAACAGCCAGTGCTGTCCGCAGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS CCA 90 bp | CGAGACGCGTGCTCGCGCTTCTCCTGGCCGGGTTGCTCAGGAGCTTaGGCCAGCTTCTCCAGCGGGATGCTCGGACTGCACAGAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: RDACSRFSWPGCSGA*ASFSSGMLGLHRAT Trigger: GGTGGCTCTGTGCAGTCCGAGCATCCCGCTGGAGAAGCTGGCCCAAGCTCCTGAGCAACCCGGCCAGGAGAAGCGCGAGCACGCGTCTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS CCA 90 bp | GCTGTTGTCGACGTGGATGCAGCGCGGGTGAAGCCGTGGGCACTCTaGCTGTGCGCAAAGGGGCCCCTCCTCCGTACACAGACACGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AVVDVDAARVKPWAL*LCAKGPLLRTQTRA Trigger: TGCCCGTGTCTGTGTACGGAGGAGGGGCCCCTTTGCGCACAGCCAGAGTGCCCACGGCTTCACCCGCGCTGCATCCACGTCGACAACAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS CCA 90 bp | ACAGCACTGGCTGTTGTCGACGTGGATGCAGCGCGGGTGAAGCCGTaGGCACTCTGGCTGTGCGCAAAGGGGCCCCTCCTCCGTACACAG | + |
|
Preference number: 5 (lower is better) Translates to: TALAVVDVDAARVKP*ALWLCAKGPLLRTQ Trigger: CTGTGTACGGAGGAGGGGCCCCTTTGCGCACAGCCAGAGTGCCCACGGCTTCACCCGCGCTGCATCCACGTCGACAACAGCCAGTGCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS GCA 90 bp | TCTTCTCCTTGCACTGCGGACAGCACTGGCTGTTGTCGACGTGGATaGAGCGCGGGTGAAGCCGTGGGCACTCTGGCTGTGCGCAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSPCTADSTGCCRRG*SAGEAVGTLAVRKG Trigger: CCCTTTGCGCACAGCCAGAGTGCCCACGGCTTCACCCGCGCTGCATCCACGTCGACAACAGCCAGTGCTGTCCGCAGTGCAAGGAGAAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
||
| CDS-3UTR CAA 90 bp | GCCGCTGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTGCCAGTCCGCGGCCTaGGCGCTCCCGCCCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AAALLSCITQKHGDMQIHCQSAA*ALPPWA Trigger: TGCCCAGGGCGGGAGCGCCAAGGCCGCGGACTGGCA...GTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCAGCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS GCA 90 bp | TCTGGTAGGTCTTGCCCCGGAACTCGCAGTAGTTCTTCTTCTCCTTaGACTGCGGACAGCACTGGCTGTTGTCGACGTGGATGCAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: SGRSCPGTRSSSSSP*TADSTGCCRRGCSA Trigger: CGCGCTGCATCCACGTCGACAACAGCCAGTGCTGTCCGCAGTGCAAGGAGAAGAAGAACTACTGCGAGTTCCGGGGCAAGACCTACCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS GCA 90 bp | CATATACGGGGTCCACACATTCCGTCTGGGGACACGCCGACACTGTaGACAGCACTTCACCATTGGCTTCACAGCGGCACCGTTCACATG | + |
|
Preference number: 5 (lower is better) Translates to: HIRGPHIPSGDTPTL*TALHHWLHSGTVHM Trigger: CATGTGAACGGTGCCGCTGTGAAGCCAATGGTGAAGTGCTGTGCACAGTGTCGGCGTGTCCCCAGACGGAATGTGTGGACCCCGTATATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS CCA 90 bp | ATTCCGTCTGGGGACACGCCGACACTGTGCACAGCACTTCACCATTaGCTTCACAGCGGCACCGTTCACATGGAGACACCACAAACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: IPSGDTPTLCTALHH*LHSGTVHMETPQTP Trigger: AGGAGTTTGTGGTGTCTCCATGTGAACGGTGCCGCTGTGAAGCCAATGGTGAAGTGCTGTGCACAGTGTCGGCGTGTCCCCAGACGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
||
| CDS-3UTR CAA 90 bp | GCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTCTGCCAGTCCGCGGCCTaGGCGCTCCCGCCCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ALLSCITQKHGDMQIHSFCQSAA*ALPPWA Trigger: TGCCCAGGGCGGGAGCGCCAAGGCCGCGGACTGGCA...GAATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR CAA 90 bp | GGCTGTCATTCAATAATTACTGAAATTCTTGTATACTGGCAGGGTTTGGGGGTATGCCAGTCCGCGGCCTaGGCGCTCCCGCCCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GCHSIITEILVYWQGLGVCQSAA*ALPPWA Trigger: TGCCCAGGGCGGGAGCGCCAAGGCCGCGGACTGGCA...TACCCCCAAACCCTGCCAGTATACAAGAATTTCAGTAATTATTGAATGACAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS-3UTR CAA 90 bp | GCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTCAGCGCGCGGCTGCCCTaGCTCTTCCAGTCCCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ALLSCITQKHGDMQIHSFSARLP*LFQSRA Trigger: TGCCCGGGACTGGAAGAGCAAGGGCAGCCGCGCGCT...GAATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS-3UTR CAA 90 bp | CATATTAAGACCCTGACTGCCTCTCTAACTCATGTACCAACTGTTGATGTCACTAGCGCGCGGCTGCCCTaGCTCTTCCAGTCCCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HIKTLTASLTHVPTVDVTSARLP*LFQSRA Trigger: TGCCCGGGACTGGAAGAGCAAGGGCAGCCGCGCGCT...AGTGACATCAACAGTTGGTACATGAGTTAGAGAGGCAGTCAGGGTCTTAATATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
||
| CDS GCA 90 bp | GTTCACATGGAGACACCACAAACTCCTCCAAAGTCTGGTAGGTCTTaGCCCGGAACTCGCAGTAGTTCTTCTTCTCCTTGCACTGCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VHMETPQTPPKSGRS*PGTRSSSSSPCTAD Trigger: GTCCGCAGTGCAAGGAGAAGAAGAACTACTGCGAGTTCCGGGGCAAGACCTACCAGACTTTGGAGGAGTTTGTGGTGTCTCCATGTGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS-3UTR CAA 90 bp | GCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTCGGGTTGCTCAGGAGCTaGGGCCAGCTTCTCCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ALLSCITQKHGDMQIHSFGLLRS*GQLLQR Trigger: CCGCTGGAGAAGCTGGCCCAAGCTCCTGAGCAACCC...GAATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
||
| CDS GCA 90 bp | GTTCAATTCTCCACGTGCCCTCTTCATAAGTGCAGTGACATATGGTaGACTCGTCAGTCTTCACCTCTCTACCAGCTGGGATTACAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VQFSTCPLHKCSDIW*TRQSSPLYQLGLQR Trigger: CCGCTGTAATCCCAGCTGGTAGAGAGGTGAAGACTGACGAGTGCACCATATGTCACTGCACTTATGAAGAGGGCACGTGGAGAATTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS GCA 90 bp | TGCACATGGCTTGCCGTTCAATTCTCCACGTGCCCTCTTCATAAGTaGAGTGACATATGGTGCACTCGTCAGTCTTCACCTCTCTACCAG | + |
|
Preference number: 5 (lower is better) Translates to: CTWLAVQFSTCPLHK*SDIWCTRQSSPLYQ Trigger: CTGGTAGAGAGGTGAAGACTGACGAGTGCACCATATGTCACTGCACTTATGAAGAGGGCACGTGGAGAATTGAACGGCAAGCCATGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS GCA 90 bp | TGCACTCATGTCTCGTGCACATGGCTTGCCGTTCAATTCTCCACGTaGCCTCTTCATAAGTGCAGTGACATATGGTGCACTCGTCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CTHVSCTWLAVQFST*PLHKCSDIWCTRQS Trigger: AGACTGACGAGTGCACCATATGTCACTGCACTTATGAAGAGGGCACGTGGAGAATTGAACGGCAAGCCATGTGCACGAGACATGAGTGCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS CCA 90 bp | GCCGTTCAATTCTCCACGTGCCCTCTTCATAAGTGCAGTGACATATaGTGCACTCGTCAGTCTTCACCTCTCTACCAGCTGGGATTACAG | + |
|
Preference number: 5 (lower is better) Translates to: AVQFSTCPLHKCSDI*CTRQSSPLYQLGLQ Trigger: CTGTAATCCCAGCTGGTAGAGAGGTGAAGACTGACGAGTGCACCATATGTCACTGCACTTATGAAGAGGGCACGTGGAGAATTGAACGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS-3UTR CAA 90 bp | TGTGGAGAAAAGAGGCAGATTGTATGTAATTACAACTGGCTCAATAGCCCATGTGGGTTGCTCAGGAGCTaGGGCCAGCTTCTCCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CGEKRQIVCNYNWLNSPCGLLRS*GQLLQR Trigger: CCGCTGGAGAAGCTGGCCCAAGCTCCTGAGCAACCC...ACATGGGCTATTGAGCCAGTTGTAATTACATACAATCTGCCTCTTTTCTCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
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| CDS-3UTR CAA 90 bp | GCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTCGGACAGCACTGGCTGTaGTCGACGTGGATGCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: ALLSCITQKHGDMQIHSFGQHWL*STWMQR Trigger: GCGCTGCATCCACGTCGACAACAGCCAGTGCTGTCC...GAATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
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| CDS-3UTR CAA 90 bp | TGTGGAGAAAAGAGGCAGATTGTATGTAATTACAACTGGCTCAATAGCCCATGTGGACAGCACTGGCTGTaGTCGACGTGGATGCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: CGEKRQIVCNYNWLNSPCGQHWL*STWMQR Trigger: GCGCTGCATCCACGTCGACAACAGCCAGTGCTGTCC...ACATGGGCTATTGAGCCAGTTGTAATTACATACAATCTGCCTCTTTTCTCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
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| CDS-3UTR CAA 90 bp | TGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTGGACAGCACTGGCTGTaGTCGACGTGGATGCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: CTAQLYYTEAWRYADTLIGQHWL*STWMQR Trigger: GCGCTGCATCCACGTCGACAACAGCCAGTGCTGTCC...AATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
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| CDS-3UTR CAA 90 bp | GCCGCTGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCTCGTGCACATGGCTaGCCGTTCAATTCTCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: AAALLSCITQKHGDMQIHSRAHG*PFNSPR Trigger: ACGTGGAGAATTGAACGGCAAGCCATGTGCACGAGA...GTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCAGCGGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
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| CDS-3UTR CAA 90 bp | AGCAAAGATAAATACAGCATCCTGTATAGTGTTTGTGTCAGATATCTTCCACAGGGGTTGCTCAGGAGCTaGGGCCAGCTTCTCCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SKDKYSILYSVCVRYLPQGLLRS*GQLLQR Trigger: CCGCTGGAGAAGCTGGCCCAAGCTCCTGAGCAACCC...CTGTGGAAGATATCTGACACAAACACTATACAGGATGCTGTATTTATCTTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| CDS-3UTR CAA 90 bp | GGCTGTCATTCAATAATTACTGAAATTCTTGTATACTGGCAGGGTTTGGGGGTATCTCGTGCACATGGCTaGCCGTTCAATTCTCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: GCHSIITEILVYWQGLGVSRAHG*PFNSPR Trigger: ACGTGGAGAATTGAACGGCAAGCCATGTGCACGAGA...TACCCCCAAACCCTGCCAGTATACAAGAATTTCAGTAATTATTGAATGACAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
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| CDS-3UTR CAA 90 bp | TTTGAATCAGCCTGCGAATTCCCTGTGAATATAGTGCATATTCTGGGCTTTGACTTTCTGCAAAGCAGTTaGGACCGTTTTTGCAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: FESACEFPVNIVHILGFDFLQSS*DRFCRS Trigger: CGATCTGCAAAAACGGTCCAAACTGCTTTGCAGAAA...GTCAAAGCCCAGAATATGCACTATATTCACAGGGAATTCGCAGGCTGATTCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129670.8 |
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| CDS-3UTR CAA 90 bp | TGCACTGCTCAGTTGTATTACACAGAAGCATGGAGATATGCAGATACACTCATTTTTCTGCAAAGCAGTTaGGACCGTTTTTGCAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: CTAQLYYTEAWRYADTLIFLQSS*DRFCRS Trigger: CGATCTGCAAAAACGGTCCAAACTGCTTTGCAGAAA...AATGAGTGTATCTGCATATCTCCATGCTTCTGTGTAATACAACTGAGCAGTGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000056344.5 ENSMUST00000129670.8 |
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| CDS-3UTR CAA 90 bp | TATGCTACAGAAACAGATACTCATGAAGAAAACAAACCAGCCCTAATTTCCCTTTTTCTGCAAAGCAGTTaGGACCGTTTTTGCAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: YATETDTHEENKPALISLFLQSS*DRFCRS Trigger: CGATCTGCAAAAACGGTCCAAACTGCTTTGCAGAAA...AAGGGAAATTAGGGCTGGTTTGTTTTCTTCATGAGTATCTGTTTCTGTAGCATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000109681.8 |
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| CDS GCA 72 bp | GCGCGCGGCTGCCCTTGCTCTTCCAGTCCCGGGCACTaGTGCCCTCGTCCCTCGAGGCGCGCCCGAGCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: ARGCPCSSSPGH*CPRPSRRARAR Trigger: GCGAGCTCGGGCGCGCCTCGAGGGACGAGGGCAGCAGTGCCCGGGACTGGAAGAGCAAGGGCAGCCGCGCGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS GCA 72 bp | TCCACGCCTCCCGGCCCGAGAGCGCGCGGCTGCCCTTaGTCTTCCAGTCCCGGGCACTGCTGCCCTCGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: STPPGPRARGCP*SSSPGHCCPRP Trigger: GGGACGAGGGCAGCAGTGCCCGGGACTGGAAGAGCAAGGGCAGCCGCGCGCTCTCGGGCCGGGAGGCGTGGA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS GCA 72 bp | CGCGGCTGCCCTTGCTCTTCCAGTCCCGGGCACTGCTaGCCTCGTCCCTCGAGGCGCGCCCGAGCTCGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RGCPCSSSPGHC*PRPSRRARARS Trigger: TGAGCGAGCTCGGGCGCGCCTCGAGGGACGAGGGCAGCAGTGCCCGGGACTGGAAGAGCAAGGGCAGCCGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS CCA 72 bp | CCCGGGCTGTCCCGAGACGCGTGCTCGCGCTTCTCCTaGCCGGGTTGCTCAGGAGCTTGGGCCAGCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PGLSRDACSRFS*PGCSGAWASFS Trigger: GGAGAAGCTGGCCCAAGCTCCTGAGCAACCCGGCCAGGAGAAGCGCGAGCACGCGTCTCGGGACAGCCCGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS CAA 90 bp | CCCCGGGCTGTCCCGAGACGCGTGCTCGCGCTTCTCCTGGCCGGGTaGCTCAGGAGCTTGGGCCAGCTTCTCCAGCGGGATGCTCGGACT | + |
|
Preference number: 6 (lower is better) Translates to: PRAVPRRVLALLLAG*LRSLGQLLQRDART Trigger: AGTCCGAGCATCCCGCTGGAGAAGCTGGCCCAAGCTCCTGAGCAACCCGGCCAGGAGAAGCGCGAGCACGCGTCTCGGGACAGCCCGGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS CAA 90 bp | CCGAGACGCGTGCTCGCGCTTCTCCTGGCCGGGTTGCTCAGGAGCTaGGGCCAGCTTCTCCAGCGGGATGCTCGGACTGCACAGAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PRRVLALLLAGLLRS*GQLLQRDARTAQSH Trigger: GTGGCTCTGTGCAGTCCGAGCATCCCGCTGGAGAAGCTGGCCCAAGCTCCTGAGCAACCCGGCCAGGAGAAGCGCGAGCACGCGTCTCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS CCA 72 bp | GACGTGGATGCAGCGCGGGTGAAGCCGTGGGCACTCTaGCTGTGCGCAAAGGGGCCCCTCCTCCGTACACAG | + |
|
Preference number: 6 (lower is better) Translates to: DVDAARVKPWAL*LCAKGPLLRTQ Trigger: CTGTGTACGGAGGAGGGGCCCCTTTGCGCACAGCCAGAGTGCCCACGGCTTCACCCGCGCTGCATCCACGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
||
| CDS CCA 72 bp | GCTGTTGTCGACGTGGATGCAGCGCGGGTGAAGCCGTaGGCACTCTGGCTGTGCGCAAAGGGGCCCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AVVDVDAARVKP*ALWLCAKGPLL Trigger: GAGGAGGGGCCCCTTTGCGCACAGCCAGAGTGCCCACGGCTTCACCCGCGCTGCATCCACGTCGACAACAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
||
| CDS TCA 72 bp | CAGCACTGGCTGTTGTCGACGTGGATGCAGCGCGGGTaGAGCCGTGGGCACTCTGGCTGTGCGCAAAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QHWLLSTWMQRG*SRGHSGCAQRG Trigger: GCCCCTTTGCGCACAGCCAGAGTGCCCACGGCTTCACCCGCGCTGCATCCACGTCGACAACAGCCAGTGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
||
| CDS CCA 72 bp | TGCTCGCGCTTCTCCTGGCCGGGTTGCTCAGGAGCTTaGGCCAGCTTCTCCAGCGGGATGCTCGGACTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: CSRFSWPGCSGA*ASFSSGMLGLH Trigger: GTGCAGTCCGAGCATCCCGCTGGAGAAGCTGGCCCAAGCTCCTGAGCAACCCGGCCAGGAGAAGCGCGAGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
||
| CDS CAA 72 bp | GTGCTCGCGCTTCTCCTGGCCGGGTTGCTCAGGAGCTaGGGCCAGCTTCTCCAGCGGGATGCTCGGACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VLALLLAGLLRS*GQLLQRDARTA Trigger: TGCAGTCCGAGCATCCCGCTGGAGAAGCTGGCCCAAGCTCCTGAGCAACCCGGCCAGGAGAAGCGCGAGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
||
| CDS GCA 72 bp | TGCACTGCGGACAGCACTGGCTGTTGTCGACGTGGATaGAGCGCGGGTGAAGCCGTGGGCACTCTGGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: CTADSTGCCRRG*SAGEAVGTLAV Trigger: CACAGCCAGAGTGCCCACGGCTTCACCCGCGCTGCATCCACGTCGACAACAGCCAGTGCTGTCCGCAGTGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
||
| CDS GCA 72 bp | GTTGCTCAGGAGCTTGGGCCAGCTTCTCCAGCGGGATaGTCGGACTGCACAGAGCCACCATCAGGCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VAQELGPASPAG*SDCTEPPSGSR Trigger: CCTGCTGCCTGATGGTGGCTCTGTGCAGTCCGAGCATCCCGCTGGAGAAGCTGGCCCAAGCTCCTGAGCAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
||
| CDS CCA 72 bp | GGGGACACGCCGACACTGTGCACAGCACTTCACCATTaGCTTCACAGCGGCACCGTTCACATGGAGACACCA | + |
|
Preference number: 6 (lower is better) Translates to: GDTPTLCTALHH*LHSGTVHMETP Trigger: TGGTGTCTCCATGTGAACGGTGCCGCTGTGAAGCCAATGGTGAAGTGCTGTGCACAGTGTCGGCGTGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS CAA 90 bp | CATTCCGTCTGGGGACACGCCGACACTGTGCACAGCACTTCACCATaGGCTTCACAGCGGCACCGTTCACATGGAGACACCACAAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: HSVWGHADTVHSTSP*ASQRHRSHGDTTNS Trigger: GGAGTTTGTGGTGTCTCCATGTGAACGGTGCCGCTGTGAAGCCAATGGTGAAGTGCTGTGCACAGTGTCGGCGTGTCCCCAGACGGAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS GCA 72 bp | TCTTGCCCCGGAACTCGCAGTAGTTCTTCTTCTCCTTaGACTGCGGACAGCACTGGCTGTTGTCGACGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SCPGTRSSSSSP*TADSTGCCRRG Trigger: TCCACGTCGACAACAGCCAGTGCTGTCCGCAGTGCAAGGAGAAGAAGAACTACTGCGAGTTCCGGGGCAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS TCA 72 bp | AAGCAGTTTGGACCGTTTTTGCAGATCGGGCAGCACTaGTCAGGCTCATATACGGGGTCCACACATTCCGTC | + |
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Preference number: 6 (lower is better) Translates to: KQFGPFLQIGQH*SGSYTGSTHSV Trigger: GACGGAATGTGTGGACCCCGTATATGAGCCTGATCAGTGCTGCCCGATCTGCAAAAACGGTCCAAACTGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS GCA 72 bp | GAGACACCACAAACTCCTCCAAAGTCTGGTAGGTCTTaGCCCGGAACTCGCAGTAGTTCTTCTTCTCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: ETPQTPPKSGRS*PGTRSSSSSPC Trigger: GCAAGGAGAAGAAGAACTACTGCGAGTTCCGGGGCAAGACCTACCAGACTTTGGAGGAGTTTGTGGTGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS GCA 72 bp | TCCACGTGCCCTCTTCATAAGTGCAGTGACATATGGTaGACTCGTCAGTCTTCACCTCTCTACCAGCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: STCPLHKCSDIW*TRQSSPLYQLG Trigger: TCCCAGCTGGTAGAGAGGTGAAGACTGACGAGTGCACCATATGTCACTGCACTTATGAAGAGGGCACGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS GCA 72 bp | GTCTCGTGCACATGGCTTGCCGTTCAATTCTCCACGTaGCCTCTTCATAAGTGCAGTGACATATGGTGCACT | + |
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Preference number: 6 (lower is better) Translates to: VSCTWLAVQFST*PLHKCSDIWCT Trigger: AGTGCACCATATGTCACTGCACTTATGAAGAGGGCACGTGGAGAATTGAACGGCAAGCCATGTGCACGAGAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS CCA 72 bp | TTCTCCACGTGCCCTCTTCATAAGTGCAGTGACATATaGTGCACTCGTCAGTCTTCACCTCTCTACCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: FSTCPLHKCSDI*CTRQSSPLYQL Trigger: CAGCTGGTAGAGAGGTGAAGACTGACGAGTGCACCATATGTCACTGCACTTATGAAGAGGGCACGTGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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| CDS GCA 72 bp | CTTGCCGTTCAATTCTCCACGTGCCCTCTTCATAAGTaGAGTGACATATGGTGCACTCGTCAGTCTTCACCT | + |
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Preference number: 6 (lower is better) Translates to: LAVQFSTCPLHK*SDIWCTRQSSP Trigger: AGGTGAAGACTGACGAGTGCACCATATGTCACTGCACTTATGAAGAGGGCACGTGGAGAATTGAACGGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056344.5 ENSMUST00000109681.8 ENSMUST00000129670.8 |
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