Pregenerated sensors for VWA5A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023186Ensembl transcript IDs: ENSMUST00000001544.12, ENSMUST00000118144.8, ENSMUST00000129598.2, ENSMUST00000137972.2
Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCACAGCCTTCCTTTCCAGAAGCTCCCATTCACACTTTAAGTCTGTaGCGTTGGCATGCAACCAGACCACAGCCAGCACTGTGGACCAGG | + |
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Preference number: 1 (lower is better) Translates to: PQPSFPEAPIHTLSL*RWHATRPQPALWTR Trigger: CCTGGTCCACAGTGCTGGCTGTGGTCTGGTTGCATGCCAACGGCACAGACTTAAAGTGTGAATGGGAGCTTCTGGAAAGGAAGGCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
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| 3UTR-3UTR TCA 90 bp | GACTCAGTGGTCGCCAGAAAAGGCTTTCCTTTCATGGGTGACATGTTTAGACGCGAACCTGCATGGTCATaGAGCCAGGCCACAGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: DSVVARKGFPFMGDMFRREPAWS*SQATAF Trigger: GAAGGCTGTGGCCTGGCTTCATGACCATGCAGGTTC...GCGTCTAAACATGTCACCCATGAAAGGAAAGCCTTTTCTGGCGACCACTGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGGTGACATGTTTAGACGCCAAAGACAGCAGGATTCACAGATAATTTCAGGATTAAGTCTGTGCCGTTaGCATGCAACCAGACCACAG | + |
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Preference number: 2 (lower is better) Translates to: MGDMFRRQRQQDSQIISGLSLCR*HATRPQ Trigger: CTGTGGTCTGGTTGCATGCCAACGGCACAGACTTAA...TCCTGAAATTATCTGTGAATCCTGCTGTCTTTGGCGTCTAAACATGTCACCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGCAATGGGCAGGGCAAAAATTCATAACAGCATGAGGTACTCAGGACACATATTTAAAGCCATTTGTTaGCCATACTACATGGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: KAMGRAKIHNSMRYSGHIFKAIC*PYYMAL Trigger: CAGAGCCATGTAGTATGGTCAACAAATGGCTTTAAA...TATGTGTCCTGAGTACCTCATGCTGTTATGAATTTTTGCCCTGCCCATTGCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| 3UTR-3UTR CCA 90 bp | AACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCAATGTTTTTAAGCATTGCTCATaGTTAATGCTGCATGCTTAC | + |
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Preference number: 2 (lower is better) Translates to: NKSIRSSPASVRFMLANVFKHCS*LMLHAY Trigger: GTAAGCATGCAGCATTAACCATGAGCAATGCTTAAA...AACATTGGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAAAATTCATAACAGCATGAGGTACTCAGGACACATAGTCCTAGTAGTACTGTTTAAGCATTGCTCATaGTTAATGCTGCATGCTTAC | + |
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Preference number: 2 (lower is better) Translates to: AKIHNSMRYSGHIVLVVLFKHCS*LMLHAY Trigger: GTAAGCATGCAGCATTAACCATGAGCAATGCTTAAA...CAGTACTACTAGGACTATGTGTCCTGAGTACCTCATGCTGTTATGAATTTTTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| 3UTR GCA 72 bp | AGCTCCCATTCACACTTTAAGTCTGTGCCGTTGGCATaGAACCAGACCACAGCCAGCACTGTGGACCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: SSHSHFKSVPLA*NQTTASTVDQA Trigger: AGCCTGGTCCACAGTGCTGGCTGTGGTCTGGTTGCATGCCAACGGCACAGACTTAAAGTGTGAATGGGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
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| 3UTR GCA 72 bp | ATTGGCAGCTTGCACAAGCATGGGGATGGAGGAACCTaGATGGTCATGAAGCCAGGCCACAGCCTTCCTTTC | + |
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Preference number: 3 (lower is better) Translates to: IGSLHKHGDGGT*MVMKPGHSLPF Trigger: GAAAGGAAGGCTGTGGCCTGGCTTCATGACCATGCAGGTTCCTCCATCCCCATGCTTGTGCAAGCTGCCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
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| 3UTR CCA 72 bp | CCAGAAGCTCCCATTCACACTTTAAGTCTGTGCCGTTaGCATGCAACCAGACCACAGCCAGCACTGTGGACC | + |
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Preference number: 3 (lower is better) Translates to: PEAPIHTLSLCR*HATRPQPALWT Trigger: GGTCCACAGTGCTGGCTGTGGTCTGGTTGCATGCCAACGGCACAGACTTAAAGTGTGAATGGGAGCTTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
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| 3UTR CCA 72 bp | GGGACTCAGTGGTCGCCAGAAAAGGCTTTCCTTTCATaGGTGACATGTTTAGACGCCAAAGACAGCAGGATT | + |
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Preference number: 3 (lower is better) Translates to: GTQWSPEKAFLS*VTCLDAKDSRI Trigger: AATCCTGCTGTCTTTGGCGTCTAAACATGTCACCCATGAAAGGAAAGCCTTTTCTGGCGACCACTGAGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
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| 3UTR CCA 72 bp | AGACAGCAGGATTCACAGATAATTTCAGGAGACTATTaGCAGCTTGCACAAGCATGGGGATGGAGGAACCTG | + |
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Preference number: 3 (lower is better) Translates to: RQQDSQIISGDY*QLAQAWGWRNL Trigger: CAGGTTCCTCCATCCCCATGCTTGTGCAAGCTGCCAATAGTCTCCTGAAATTATCTGTGAATCCTGCTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
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| 3UTR TCA 72 bp | CTGGTAGGGCTATTCTATGAGTTTAAAGCCATTTGTTaGCCATACTACATGGCTCTGCATAGAGAATGGATA | + |
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Preference number: 3 (lower is better) Translates to: LVGLFYEFKAIC*PYYMALHREWI Trigger: TATCCATTCTCTATGCAGAGCCATGTAGTATGGTCAACAAATGGCTTTAAACTCATAGAATAGCCCTACCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR TCA 90 bp | AGGACACATAGTCCTAGTAGTACTGCCTCAACTGAGGAGCATCCATCATGTCTGCCTGGAGGATGTGCTTaGGGCACACTGCTCCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: RTHSPSSTASTEEHPSCLPGGCA*GTLLLC Trigger: GCACAGGAGCAGTGTGCCTCAAGCACATCCTCCAGG...CAGACATGATGGATGCTCCTCAGTTGAGGCAGTACTACTAGGACTATGTGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR TCA 90 bp | CACATAGTCCTAGTAGTACTGCCTCAACTGAGGAGCATCCATCATGTCTGTGCTGAACCTGCATGGTCATaGAGCCAGGCCACAGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: HIVLVVLPQLRSIHHVCAEPAWS*SQATAF Trigger: GAAGGCTGTGGCCTGGCTTCATGACCATGCAGGTTC...AGCACAGACATGATGGATGCTCCTCAGTTGAGGCAGTACTACTAGGACTATGTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR GCA 90 bp | TTTTCTCAGCCAGCTCCTCTTACTCTCAGGCAGCAATTTGCACTTACGAAGGAATGGGCCAGAGGCCCCTaGACTGGTTTGTTCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: FSQPAPLTLRQQFALTKEWARGP*TGLFSS Trigger: GGAGCTGAACAAACCAGTGCAGGGGCCTCTGGCCCA...TTCCTTCGTAAGTGCAAATTGCTGCCTGAGAGTAAGAGGAGCTGGCTGAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001544.12 |
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| CDS-3UTR GCA 90 bp | AGACATAACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCGCTGAGGGGTCCTCATaGTTGGCAGGGTTTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: RHNKSIRSSPASVRFMLAAEGSS*LAGFAA Trigger: GGCTGCAAACCCTGCCAAGCATGAGGACCCCTCAGC...GGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTTATGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR GCA 90 bp | TCAGGACACATAGTCCTAGTAGTACTGCCTCAACTGAGGAGCATCCATCATGTCCCAAGAGCCTTGGTCTaGATCCTGTCCTTGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGHIVLVVLPQLRSIHHVPRALV*ILSLPV Trigger: CACAGGCAAGGACAGGATGCAGACCAAGGCTCTTGG...GACATGATGGATGCTCCTCAGTTGAGGCAGTACTACTAGGACTATGTGTCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR GCA 90 bp | AAAATAAGGGACTCAGTGGTCGCCAGAAAAGGCTTTCCTTTCATGGGTGACATGTCTGTGCCGTTGGCATaGAACCAGACCACAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KIRDSVVARKGFPFMGDMSVPLA*NQTTAS Trigger: GCTGGCTGTGGTCTGGTTGCATGCCAACGGCACAGA...CATGTCACCCATGAAAGGAAAGCCTTTTCTGGCGACCACTGAGTCCCTTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR TCA 90 bp | TCAGGACACATAGTCCTAGTAGTACTGCCTCAACTGAGGAGCATCCATCATGTCGCCTCGATGCGTAGCTaGGAATTGTTCTCTGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: SGHIVLVVLPQLRSIHHVASMRS*ELFSVL Trigger: GAGCACAGAGAACAATTCTCAGCTACGCATCGAGGC...GACATGATGGATGCTCCTCAGTTGAGGCAGTACTACTAGGACTATGTGTCCTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR CCA 90 bp | CACATAGTCCTAGTAGTACTGCCTCAACTGAGGAGCATCCATCATGTCTGTGCTAATAAGTATGCTTGGTaGCCCTGGGAGAGGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: HIVLVVLPQLRSIHHVCANKYAW*PWERAS Trigger: GGAAGCCCTCTCCCAGGGCCACCAAGCATACTTATT...AGCACAGACATGATGGATGCTCCTCAGTTGAGGCAGTACTACTAGGACTATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR CCA 90 bp | TCAGGACACATAGTCCTAGTAGTACTGCCTCAACTGAGGAGCATCCATCATGTCCAGAGGCCCCTGCACTaGTTTGTTCAGCTCCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: SGHIVLVVLPQLRSIHHVQRPLH*FVQLLV Trigger: AACAAGGAGCTGAACAAACCAGTGCAGGGGCCTCTG...GACATGATGGATGCTCCTCAGTTGAGGCAGTACTACTAGGACTATGTGTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR CCA 90 bp | TCAGGACACATAGTCCTAGTAGTACTGCCTCAACTGAGGAGCATCCATCATGTCGCACAAGCATGGGGATaGAGGAACCTGCATGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: SGHIVLVVLPQLRSIHHVAQAWG*RNLHGH Trigger: ATGACCATGCAGGTTCCTCCATCCCCATGCTTGTGC...GACATGATGGATGCTCCTCAGTTGAGGCAGTACTACTAGGACTATGTGTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR TCA 90 bp | AACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCAATGTTCCTGTGCTCTCCACTTaGGGCATAAGCCCAGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: NKSIRSSPASVRFMLANVPVLST*GISPVS Trigger: ACTGACTGGGCTTATGCCTCAAGTGGAGAGCACAGG...AACATTGGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR GCA 90 bp | AGGACACATAGTCCTAGTAGTACTGCCTCAACTGAGGAGCATCCATCATGTCTGATACCTCAGGGTAACTaGAACCTTAGCTCCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: RTHSPSSTASTEEHPSCLIPQGN*NLSSRL Trigger: CAGCCTGGAGCTAAGGTTGCAGTTACCCTGAGGTAT...CAGACATGATGGATGCTCCTCAGTTGAGGCAGTACTACTAGGACTATGTGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR GCA 90 bp | AAGGCAATGGGCAGGGCAAAAATTCATAACAGCATGAGGTACTCAGGACACATACTACCCTGGAGGATGTaGTTGAGGCACACTGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KAMGRAKIHNSMRYSGHILPWRM*LRHTAP Trigger: AGGAGCAGTGTGCCTCAAGCACATCCTCCAGGGTAG...TATGTGTCCTGAGTACCTCATGCTGTTATGAATTTTTGCCCTGCCCATTGCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR GCA 90 bp | CCTTCCTTTCCAGAAGCTCCCATTCACACTTTAAGTCTGTGCCGTTGGCATGCACTCCCAGGAGCCATTTaGCTTTTGGAGAGAAATCAG | + |
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Preference number: 4 (lower is better) Translates to: PSFPEAPIHTLSLCRWHALPGAI*LLERNQ Trigger: CTGATTTCTCTCCAAAAGGCAAATGGCTCCTGGGAG...TGCATGCCAACGGCACAGACTTAAAGTGTGAATGGGAGCTTCTGGAAAGGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
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| CDS-3UTR CCA 90 bp | AACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCAATGTTTATGCTTGGTGGCCCTaGGAGAGGGCTTCCTCATAC | + |
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Preference number: 4 (lower is better) Translates to: NKSIRSSPASVRFMLANVYAWWP*ERASSY Trigger: GTATGAGGAAGCCCTCTCCCAGGGCCACCAAGCATA...AACATTGGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTCAGCCAGCTCCTCTTACTCTCAGGCAGCAATTTGCACTTACGAAGGAATCCAATAAGTATGCTTaGTGGCCCTGGGAGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: FSQPAPLTLRQQFALTKESNKYA*WPWERA Trigger: AGCCCTCTCCCAGGGCCACCAAGCATACTTATTGGA...TTCCTTCGTAAGTGCAAATTGCTGCCTGAGAGTAAGAGGAGCTGGCTGAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001544.12 |
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| CDS-3UTR CCA 90 bp | AGACATAACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCGCACAAGCATGGGGATaGAGGAACCTGCATGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: RHNKSIRSSPASVRFMLAAQAWG*RNLHGH Trigger: ATGACCATGCAGGTTCCTCCATCCCCATGCTTGTGC...GGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTTATGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR TCA 90 bp | AACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCAATGTTGCCTCGATGCGTAGCTaGGAATTGTTCTCTGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: NKSIRSSPASVRFMLANVASMRS*ELFSVL Trigger: GAGCACAGAGAACAATTCTCAGCTACGCATCGAGGC...AACATTGGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR TCA 90 bp | AGACATAACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCCCCGGGCGATATTTTTaGTTAAACTGGTCGAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: RHNKSIRSSPASVRFMLAPGRYF*LNWSRL Trigger: GAGCCTCGACCAGTTTAATCAAAAATATCGCCCGGG...GGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTTATGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR TCA 90 bp | GGCTATTCTATGAGTTTAAAGCCATTTGTTGACCATACTACATGGCTCTGCATACCTGGAGGATGTGCTTaGGGCACACTGCTCCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: GYSMSLKPFVDHTTWLCIPGGCA*GTLLLC Trigger: GCACAGGAGCAGTGTGCCTCAAGCACATCCTCCAGG...TATGCAGAGCCATGTAGTATGGTCAACAAATGGCTTTAAACTCATAGAATAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR TCA 90 bp | GACTCAGTGGTCGCCAGAAAAGGCTTTCCTTTCATGGGTGACATGTTTAGACGCAGCCTTGATGTCTTTTaGCTTAGTGCCCAGGATCTT | + |
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Preference number: 4 (lower is better) Translates to: DSVVARKGFPFMGDMFRRSLDVF*LSAQDL Trigger: AAGATCCTGGGCACTAAGTCAAAAGACATCAAGGCT...GCGTCTAAACATGTCACCCATGAAAGGAAAGCCTTTTCTGGCGACCACTGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
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| CDS-3UTR TCA 90 bp | GCAAAAATTCATAACAGCATGAGGTACTCAGGACACATAGTCCTAGTAGTACTGGAACCTGCATGGTCATaGAGCCAGGCCACAGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: AKIHNSMRYSGHIVLVVLEPAWS*SQATAF Trigger: GAAGGCTGTGGCCTGGCTTCATGACCATGCAGGTTC...CAGTACTACTAGGACTATGTGTCCTGAGTACCTCATGCTGTTATGAATTTTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR GCA 90 bp | CACATAGTCCTAGTAGTACTGCCTCAACTGAGGAGCATCCATCATGTCTGTGCTTCATTTGCCTTGGGTTaGAGGGAAAATGTCACCCTG | + |
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Preference number: 4 (lower is better) Translates to: HIVLVVLPQLRSIHHVCASFALG*RENVTL Trigger: CAGGGTGACATTTTCCCTGCAACCCAAGGCAAATGA...AGCACAGACATGATGGATGCTCCTCAGTTGAGGCAGTACTACTAGGACTATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR GCA 90 bp | CCACATCTTTTTAAGTTCTTTCCTATGGTAGTACTTGGATCACTAATCTGCTCCTGGGCCAGAGGCCCCTaGACTGGTTTGTTCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PHLFKFFPMVVLGSLICSWARGP*TGLFSS Trigger: GGAGCTGAACAAACCAGTGCAGGGGCCTCTGGCCCA...GGAGCAGATTAGTGATCCAAGTACTACCATAGGAAAGAACTTAAAAAGATGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR CCA 90 bp | AAAATAAGGGACTCAGTGGTCGCCAGAAAAGGCTTTCCTTTCATGGGTGACATGTTAAGTCTGTGCCGTTaGCATGCAACCAGACCACAG | + |
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Preference number: 4 (lower is better) Translates to: KIRDSVVARKGFPFMGDMLSLCR*HATRPQ Trigger: CTGTGGTCTGGTTGCATGCCAACGGCACAGACTTAA...CATGTCACCCATGAAAGGAAAGCCTTTTCTGGCGACCACTGAGTCCCTTATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR TCA 90 bp | TCAGGACACATAGTCCTAGTAGTACTGCCTCAACTGAGGAGCATCCATCATGTCTCAGTCAAGGAAACCTaGGCAGAAGTCTTGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: SGHIVLVVLPQLRSIHHVSVKET*AEVLSS Trigger: AGATGACAAGACTTCTGCTCAGGTTTCCTTGACTGA...GACATGATGGATGCTCCTCAGTTGAGGCAGTACTACTAGGACTATGTGTCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR TCA 90 bp | AGGACACATAGTCCTAGTAGTACTGCCTCAACTGAGGAGCATCCATCATGTCTGTTCCTGAACGGTCCATaGGAAACACAAATTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: RTHSPSSTASTEEHPSCLFLNGP*ETQILH Trigger: GTGGAGAATTTGTGTTTCTCATGGACCGTTCAGGAA...CAGACATGATGGATGCTCCTCAGTTGAGGCAGTACTACTAGGACTATGTGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR TCA 90 bp | CATAACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCAATTCACTTCTCCATCCGTaGAGACAAAGAGCTGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: HNKSIRSSPASVRFMLANSLLHP*RQRAVG Trigger: CCCTACAGCTCTTTGTCTTCACGGATGGAGAAGTGA...ATTGGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR TCA 90 bp | AAGGCAATGGGCAGGGCAAAAATTCATAACAGCATGAGGTACTCAGGACACATAACTGTAGAGCAAACTTaGGAGACCCAAGAGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: KAMGRAKIHNSMRYSGHITVEQT*ETQEPW Trigger: CCAAGGCTCTTGGGTCTCTCAAGTTTGCTCTACAGT...TATGTGTCCTGAGTACCTCATGCTGTTATGAATTTTTGCCCTGCCCATTGCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR TCA 90 bp | TCAGGACACATAGTCCTAGTAGTACTGCCTCAACTGAGGAGCATCCATCATGTCCCAAAATCCTTAGTCTaGATCAAGGACTTTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SGHIVLVVLPQLRSIHHVPKSLV*IKDFAA Trigger: GGCTGCAAAGTCCTTGATTCAGACTAAGGATTTTGG...GACATGATGGATGCTCCTCAGTTGAGGCAGTACTACTAGGACTATGTGTCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR GCA 90 bp | AAGGCAATGGGCAGGGCAAAAATTCATAACAGCATGAGGTACTCAGGACACATAATACCTCAGGGTAACTaGAACCTTAGCTCCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KAMGRAKIHNSMRYSGHIIPQGN*NLSSRL Trigger: CAGCCTGGAGCTAAGGTTGCAGTTACCCTGAGGTAT...TATGTGTCCTGAGTACCTCATGCTGTTATGAATTTTTGCCCTGCCCATTGCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR GCA 90 bp | AAGGCAATGGGCAGGGCAAAAATTCATAACAGCATGAGGTACTCAGGACACATATCTTGGATTCAAGATTaGTGGGAGCAGGTAGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: KAMGRAKIHNSMRYSGHISWIQD*WEQVAQ Trigger: CTGCGCTACCTGCTCCCAGCAATCTTGAATCCAAGA...TATGTGTCCTGAGTACCTCATGCTGTTATGAATTTTTGCCCTGCCCATTGCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS-3UTR GCA 90 bp | AAGGCAATGGGCAGGGCAAAAATTCATAACAGCATGAGGTACTCAGGACACATATCCCGGTCAAACTTGTaGCCTTCAGTCAAGGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: KAMGRAKIHNSMRYSGHISRSNL*PSVKET Trigger: GGTTTCCTTGACTGAAGGGCACAAGTTTGACCGGGA...TATGTGTCCTGAGTACCTCATGCTGTTATGAATTTTTGCCCTGCCCATTGCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTCAGCCAGCTCCTCTTACTCTCAGGCAGCAATTTGCACTTACGAAGGAACTCCCAGGAGCCATTTaGCTTTTGGAGAGAAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSQPAPLTLRQQFALTKELPGAI*LLERNQ Trigger: CTGATTTCTCTCCAAAAGGCAAATGGCTCCTGGGAG...TTCCTTCGTAAGTGCAAATTGCTGCCTGAGAGTAAGAGGAGCTGGCTGAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001544.12 |
||
| CDS-3UTR GCA 90 bp | CCACATCTTTTTAAGTTCTTTCCTATGGTAGTACTTGGATCACTAATCTGCTCCGGGGATGGAGGAACCTaGATGGTCATGAAGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PHLFKFFPMVVLGSLICSGDGGT*MVMKPG Trigger: GCCTGGCTTCATGACCATGCAGGTTCCTCCATCCCC...GGAGCAGATTAGTGATCCAAGTACTACCATAGGAAAGAACTTAAAAAGATGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR GCA 90 bp | AACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCAATGTTAGACTATTGGCAGCTTaGACAAGCATGGGGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NKSIRSSPASVRFMLANVRLLAA*TSMGME Trigger: CTCCATCCCCATGCTTGTGCAAGCTGCCAATAGTCT...AACATTGGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | AGGACACATAGTCCTAGTAGTACTGCCTCAACTGAGGAGCATCCATCATGTCTGAAAGAGCAGTTGGACTaGACCCTTTCAATACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RTHSPSSTASTEEHPSCLKEQLD*TLSIPC Trigger: GCATGGTATTGAAAGGGTCCAGTCCAACTGCTCTTT...CAGACATGATGGATGCTCCTCAGTTGAGGCAGTACTACTAGGACTATGTGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR TCA 90 bp | GGCTATTCTATGAGTTTAAAGCCATTTGTTGACCATACTACATGGCTCTGCATACCTGTGCTCTCCACTTaGGGCATAAGCCCAGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GYSMSLKPFVDHTTWLCIPVLST*GISPVS Trigger: ACTGACTGGGCTTATGCCTCAAGTGGAGAGCACAGG...TATGCAGAGCCATGTAGTATGGTCAACAAATGGCTTTAAACTCATAGAATAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR TCA 90 bp | AGACATAACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCCCAACCGATGAATGGTaGAATTGTCATTTGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RHNKSIRSSPASVRFMLAPTDEW*NCHLPW Trigger: CCAAGGCAAATGACAATTTCACCATTCATCGGTTGG...GGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTTATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR TCA 90 bp | AAAATAAGGGACTCAGTGGTCGCCAGAAAAGGCTTTCCTTTCATGGGTGACATGAGCCTTGATGTCTTTTaGCTTAGTGCCCAGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KIRDSVVARKGFPFMGDMSLDVF*LSAQDL Trigger: AAGATCCTGGGCACTAAGTCAAAAGACATCAAGGCT...CATGTCACCCATGAAAGGAAAGCCTTTTCTGGCGACCACTGAGTCCCTTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 ENSMUST00000137972.2 |
||
| CDS-3UTR GCA 90 bp | ATTCATAACAGCATGAGGTACTCAGGACACATAGTCCTAGTAGTACTGCCTCAATCTTGGATTCAAGATTaGTGGGAGCAGGTAGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IHNSMRYSGHIVLVVLPQSWIQD*WEQVAQ Trigger: CTGCGCTACCTGCTCCCAGCAATCTTGAATCCAAGA...TTGAGGCAGTACTACTAGGACTATGTGTCCTGAGTACCTCATGCTGTTATGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR GCA 90 bp | ATTCATAACAGCATGAGGTACTCAGGACACATAGTCCTAGTAGTACTGCCTCAATCCCGGTCAAACTTGTaGCCTTCAGTCAAGGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: IHNSMRYSGHIVLVVLPQSRSNL*PSVKET Trigger: GGTTTCCTTGACTGAAGGGCACAAGTTTGACCGGGA...TTGAGGCAGTACTACTAGGACTATGTGTCCTGAGTACCTCATGCTGTTATGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR GCA 90 bp | GGCTATTCTATGAGTTTAAAGCCATTTGTTGACCATACTACATGGCTCTGCATACCAAGAGCCTTGGTCTaGATCCTGTCCTTGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GYSMSLKPFVDHTTWLCIPRALV*ILSLPV Trigger: CACAGGCAAGGACAGGATGCAGACCAAGGCTCTTGG...TATGCAGAGCCATGTAGTATGGTCAACAAATGGCTTTAAACTCATAGAATAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCAATGGGCAGGGCAAAAATTCATAACAGCATGAGGTACTCAGGACACATATCATTTGCCTTGGGTTaGAGGGAAAATGTCACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KAMGRAKIHNSMRYSGHISFALG*RENVTL Trigger: CAGGGTGACATTTTCCCTGCAACCCAAGGCAAATGA...TATGTGTCCTGAGTACCTCATGCTGTTATGAATTTTTGCCCTGCCCATTGCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR GCA 90 bp | AGACATCAGCAATTCTTATTAAATCATATCAGAAAGCTGAGGGCAAAACTAGACGCTGAGGGGTCCTCATaGTTGGCAGGGTTTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RHQQFLLNHIRKLRAKLDAEGSS*LAGFAA Trigger: GGCTGCAAACCCTGCCAAGCATGAGGACCCCTCAGC...GTCTAGTTTTGCCCTCAGCTTTCTGATATGATTTAATAAGAATTGCTGATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR GCA 90 bp | TCTATGAGTTTAAAGCCATTTGTTGACCATACTACATGGCTCTGCATAGAGAATTCTGTGCCGTTGGCATaGAACCAGACCACAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SMSLKPFVDHTTWLCIENSVPLA*NQTTAS Trigger: GCTGGCTGTGGTCTGGTTGCATGCCAACGGCACAGA...ATTCTCTATGCAGAGCCATGTAGTATGGTCAACAAATGGCTTTAAACTCATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR GCA 90 bp | TCTATGAGTTTAAAGCCATTTGTTGACCATACTACATGGCTCTGCATAGAGAATGGGGATGGAGGAACCTaGATGGTCATGAAGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SMSLKPFVDHTTWLCIENGDGGT*MVMKPG Trigger: GCCTGGCTTCATGACCATGCAGGTTCCTCCATCCCC...ATTCTCTATGCAGAGCCATGTAGTATGGTCAACAAATGGCTTTAAACTCATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAAATGATAGGGATAGAAAATAAGGGACTCAGTGGTCGCCAGAAAAGGCTTCCCCTTGTTTCTCTGTaGATCTCACCTTGGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KEMIGIENKGLSGRQKRLPLVSL*ISPWQG Trigger: ACCCTGCCAAGGTGAGATGCACAGAGAAACAAGGGG...AAGCCTTTTCTGGCGACCACTGAGTCCCTTATTTTCTATCCCTATCATTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
||
| CDS-3UTR CCA 90 bp | CCACATCTTTTTAAGTTCTTTCCTATGGTAGTACTTGGATCACTAATCTGCTCCTATGCTTGGTGGCCCTaGGAGAGGGCTTCCTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: PHLFKFFPMVVLGSLICSYAWWP*ERASSY Trigger: GTATGAGGAAGCCCTCTCCCAGGGCCACCAAGCATA...GGAGCAGATTAGTGATCCAAGTACTACCATAGGAAAGAACTTAAAAAGATGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | CACATAGTCCTAGTAGTACTGCCTCAACTGAGGAGCATCCATCATGTCTGTGCTAGAGAGCTGATATCTTaGATTCAAGATTGCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HIVLVVLPQLRSIHHVCARELIS*IQDCWE Trigger: CTCCCAGCAATCTTGAATCCAAGATATCAGCTCTCT...AGCACAGACATGATGGATGCTCCTCAGTTGAGGCAGTACTACTAGGACTATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | AAAATAAGGGACTCAGTGGTCGCCAGAAAAGGCTTTCCTTTCATGGGTGACATGCACTTCTGGGATATCTaGGTAGAAACTCACCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: KIRDSVVARKGFPFMGDMHFWDI*VETHHC Trigger: GCAATGGTGAGTTTCTACCCAGATATCCCAGAAGTG...CATGTCACCCATGAAAGGAAAGCCTTTTCTGGCGACCACTGAGTCCCTTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | CATAACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCAATGGGGATGACCAGGAATaGAGGATGCCTTGTAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: HNKSIRSSPASVRFMLANGDDQE*RMPCKC Trigger: ACATTTACAAGGCATCCTCCATTCCTGGTCATCCCC...ATTGGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | AAAATAAGGGACTCAGTGGTCGCCAGAAAAGGCTTTCCTTTCATGGGTGACATGTCTTTTGAGGCCTCCTaGGATCCAAAATCCTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KIRDSVVARKGFPFMGDMSFEAS*DPKSLV Trigger: GACTAAGGATTTTGGATCCCAGGAGGCCTCAAAAGA...CATGTCACCCATGAAAGGAAAGCCTTTTCTGGCGACCACTGAGTCCCTTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | CATAACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCAATAGCCACCAGAGAAACTaGAGTAGAACCGCATACTAC | + |
|
Preference number: 4 (lower is better) Translates to: HNKSIRSSPASVRFMLANSHQRN*SRTAYY Trigger: GTAGTATGCGGTTCTACTCCAGTTTCTCTGGTGGCT...ATTGGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR TCA 90 bp | CATAACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCAATCAAGCAACTGTTTGCTaGCTGTTCAGAGAGCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: HNKSIRSSPASVRFMLANQATVC*LFRELI Trigger: TATCAGCTCTCTGAACAGTCAGCAAACAGTTGCTTG...ATTGGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR TCA 90 bp | AACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCAATGTTTTCCTGAACGGTCCATaGGAAACACAAATTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NKSIRSSPASVRFMLANVFLNGP*ETQILH Trigger: GTGGAGAATTTGTGTTTCTCATGGACCGTTCAGGAA...AACATTGGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR TCA 90 bp | CATAACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCAATCCAACCGATGAATGGTaGAATTGTCATTTGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HNKSIRSSPASVRFMLANPTDEW*NCHLPW Trigger: CCAAGGCAAATGACAATTTCACCATTCATCGGTTGG...ATTGGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAAATGATAGGGATAGAAAATAAGGGACTCAGTGGTCGCCAGAAAAGGCTTGCAGGTTCCCCACGTTaGAAGAAAAGACATCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KEMIGIENKGLSGRQKRLAGSPR*KKRHLW Trigger: CCAGAGATGTCTTTTCTTGCAACGTGGGGAACCTGC...AAGCCTTTTCTGGCGACCACTGAGTCCCTTATTTTCTATCCCTATCATTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | AGACATAACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCAGAGAGCTGATATCTTaGATTCAAGATTGCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RHNKSIRSSPASVRFMLARELIS*IQDCWE Trigger: CTCCCAGCAATCTTGAATCCAAGATATCAGCTCTCT...GGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTTATGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | ATTCATAACAGCATGAGGTACTCAGGACACATAGTCCTAGTAGTACTGCCTCAACTTCCAAAGGGACTGTaGGTTTCTGGATGTTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IHNSMRYSGHIVLVVLPQLPKGL*VSGCSS Trigger: GCTTGAACATCCAGAAACCCACAGTCCCTTTGGAAG...TTGAGGCAGTACTACTAGGACTATGTGTCCTGAGTACCTCATGCTGTTATGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | ATTCATAACAGCATGAGGTACTCAGGACACATAGTCCTAGTAGTACTGCCTCAAGGGGATGACCAGGAATaGAGGATGCCTTGTAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: IHNSMRYSGHIVLVVLPQGDDQE*RMPCKC Trigger: ACATTTACAAGGCATCCTCCATTCCTGGTCATCCCC...TTGAGGCAGTACTACTAGGACTATGTGTCCTGAGTACCTCATGCTGTTATGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAAATTCATAACAGCATGAGGTACTCAGGACACATAGTCCTAGTAGTACTGTTAAGTCTGTGCCGTTaGCATGCAACCAGACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: AKIHNSMRYSGHIVLVVLLSLCR*HATRPQ Trigger: CTGTGGTCTGGTTGCATGCCAACGGCACAGACTTAA...CAGTACTACTAGGACTATGTGTCCTGAGTACCTCATGCTGTTATGAATTTTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR TCA 90 bp | AGGACACATAGTCCTAGTAGTACTGCCTCAACTGAGGAGCATCCATCATGTCTGGATGGACAATGTTACTaGGATATTTTTCAGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RTHSPSSTASTEEHPSCLDGQCY*DIFQWY Trigger: GTACCACTGAAAAATATCTCAGTAACATTGTCCATC...CAGACATGATGGATGCTCCTCAGTTGAGGCAGTACTACTAGGACTATGTGTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR TCA 90 bp | TATTCTATGAGTTTAAAGCCATTTGTTGACCATACTACATGGCTCTGCATAGAGTTCTCCACAGGCCTTTaGGGCTTCCACTTCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YSMSLKPFVDHTTWLCIEFSTGL*GFHFWD Trigger: ATCCCAGAAGTGGAAGCCTCAAAGGCCTGTGGAGAA...CTCTATGCAGAGCCATGTAGTATGGTCAACAAATGGCTTTAAACTCATAGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR TCA 90 bp | TTTAAGCATTGCTCATGGTTAATGCTGCATGCTTACTATAGATCTCATGCCAATTTCTCCACAGGCCTTTaGGGCTTCCACTTCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FKHCSWLMLHAYYRSHANFSTGL*GFHFWD Trigger: ATCCCAGAAGTGGAAGCCTCAAAGGCCTGTGGAGAA...ATTGGCATGAGATCTATAGTAAGCATGCAGCATTAACCATGAGCAATGCTTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR TCA 90 bp | AACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCAATGTTTTCTTTTTCTTCTTTTaGGGCCTCCTGGGATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NKSIRSSPASVRFMLANVFFFFF*GLLGSK Trigger: TTTGGATCCCAGGAGGCCTCAAAAGAAGAAAAAGAA...AACATTGGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR TCA 90 bp | ATTCATAACAGCATGAGGTACTCAGGACACATAGTCCTAGTAGTACTGCCTCAACTCCAGACTGAAGGCTaGTGTTCATCACATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IHNSMRYSGHIVLVVLPQLQTEG*CSSHLL Trigger: AAGAAGATGTGATGAACATCAGCCTTCAGTCTGGAG...TTGAGGCAGTACTACTAGGACTATGTGTCCTGAGTACCTCATGCTGTTATGAAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR GCA 90 bp | CATAACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCAATCTTATCCTGCAACTCTaGCACAATTTTCTTCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: HNKSIRSSPASVRFMLANLILQL*HNFLPI Trigger: GATGGGAAGAAAATTGTGGCAGAGTTGCAGGATAAG...ATTGGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCAATGGGCAGGGCAAAAATTCATAACAGCATGAGGTACTCAGGACACATAGCCTTCATCTTATCCTaGAACTCTGCCACAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KAMGRAKIHNSMRYSGHIAFILS*NSATIF Trigger: GAAAATTGTGGCAGAGTTGCAGGATAAGATGAAGGC...TATGTGTCCTGAGTACCTCATGCTGTTATGAATTTTTGCCCTGCCCATTGCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR GCA 90 bp | CATAACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCAATGCCTTCATCTTATCCTaGAACTCTGCCACAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HNKSIRSSPASVRFMLANAFILS*NSATIF Trigger: GAAAATTGTGGCAGAGTTGCAGGATAAGATGAAGGC...ATTGGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAAATGATAGGGATAGAAAATAAGGGACTCAGTGGTCGCCAGAAAAGGCTTGAGAATTGTTCTCTGTaGTCATGGGGGAGTCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: KEMIGIENKGLSGRQKRLENCSL*SWGSPY Trigger: GTATGGACTCCCCCATGAGCACAGAGAACAATTCTC...AAGCCTTTTCTGGCGACCACTGAGTCCCTTATTTTCTATCCCTATCATTTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR GCA 90 bp | AGACATAACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCATGCCTTGTAAATGTTaGAGAGGGGTGTCAAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: RHNKSIRSSPASVRFMLAMPCKC*RGVSRF Trigger: AAATCTTGACACCCCTCTGCAACATTTACAAGGCAT...GGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTTATGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAGCATTGCTCATGGTTAATGCTGCATGCTTACTATAGATCTCATGCCAATAATAAGTATGCTTGGTaGCCCTGGGAGAGGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FKHCSWLMLHAYYRSHANNKYAW*PWERAS Trigger: GGAAGCCCTCTCCCAGGGCCACCAAGCATACTTATT...ATTGGCATGAGATCTATAGTAAGCATGCAGCATTAACCATGAGCAATGCTTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | CACATAGTCCTAGTAGTACTGCCTCAACTGAGGAGCATCCATCATGTCTGTGCTAAGAAAAGACATCTCTaGAATAGTCATCCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HIVLVVLPQLRSIHHVCAKKRHL*NSHPLP Trigger: TGGAAGAGGATGACTATTCCAGAGATGTCTTTTCTT...AGCACAGACATGATGGATGCTCCTCAGTTGAGGCAGTACTACTAGGACTATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAAATTCATAACAGCATGAGGTACTCAGGACACATAGTCCTAGTAGTACTGCTTCCAAAGGGACTGTaGGTTTCTGGATGTTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AKIHNSMRYSGHIVLVVLLPKGL*VSGCSS Trigger: GCTTGAACATCCAGAAACCCACAGTCCCTTTGGAAG...CAGTACTACTAGGACTATGTGTCCTGAGTACCTCATGCTGTTATGAATTTTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAGCATTGCTCATGGTTAATGCTGCATGCTTACTATAGATCTCATGCCAATCAGAGGCCCCTGCACTaGTTTGTTCAGCTCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FKHCSWLMLHAYYRSHANQRPLH*FVQLLV Trigger: AACAAGGAGCTGAACAAACCAGTGCAGGGGCCTCTG...ATTGGCATGAGATCTATAGTAAGCATGCAGCATTAACCATGAGCAATGCTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCAATGGGCAGGGCAAAAATTCATAACAGCATGAGGTACTCAGGACACATAGACTGTTCAGAGAGCTaGTATCTTGGATTCAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: KAMGRAKIHNSMRYSGHIDCSES*YLGFKI Trigger: AATCTTGAATCCAAGATATCAGCTCTCTGAACAGTC...TATGTGTCCTGAGTACCTCATGCTGTTATGAATTTTTGCCCTGCCCATTGCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAAATGATAGGGATAGAAAATAAGGGACTCAGTGGTCGCCAGAAAAGGCTTCTCCAGACTGAAGGCTaGTGTTCATCACATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KEMIGIENKGLSGRQKRLLQTEG*CSSHLL Trigger: AAGAAGATGTGATGAACATCAGCCTTCAGTCTGGAG...AAGCCTTTTCTGGCGACCACTGAGTCCCTTATTTTCTATCCCTATCATTTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR GCA 90 bp | TCTATGAGTTTAAAGCCATTTGTTGACCATACTACATGGCTCTGCATAGAGAATGCAGGTTCCCCACGTTaGAAGAAAAGACATCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SMSLKPFVDHTTWLCIENAGSPR*KKRHLW Trigger: CCAGAGATGTCTTTTCTTGCAACGTGGGGAACCTGC...ATTCTCTATGCAGAGCCATGTAGTATGGTCAACAAATGGCTTTAAACTCATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR GCA 90 bp | GGCTATTCTATGAGTTTAAAGCCATTTGTTGACCATACTACATGGCTCTGCATAGAGAATTGTTCTCTGTaGTCATGGGGGAGTCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: GYSMSLKPFVDHTTWLCIENCSL*SWGSPY Trigger: GTATGGACTCCCCCATGAGCACAGAGAACAATTCTC...TATGCAGAGCCATGTAGTATGGTCAACAAATGGCTTTAAACTCATAGAATAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | GGCTATTCTATGAGTTTAAAGCCATTTGTTGACCATACTACATGGCTCTGCATACTTTCAATACCATGCTaGGAAGTGATGGTGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GYSMSLKPFVDHTTWLCILSIPC*EVMVAV Trigger: GACTGCCACCATCACTTCCCAGCATGGTATTGAAAG...TATGCAGAGCCATGTAGTATGGTCAACAAATGGCTTTAAACTCATAGAATAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAAATGATAGGGATAGAAAATAAGGGACTCAGTGGTCGCCAGAAAAGGCTTCAGTACCCCCTAAGTTaGCTTTTAAAGCCTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: KEMIGIENKGLSGRQKRLQYPLS*LLKPSL Trigger: GAGTGAAGGCTTTAAAAGCCAACTTAGGGGGTACTG...AAGCCTTTTCTGGCGACCACTGAGTCCCTTATTTTCTATCCCTATCATTTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAAATTCATAACAGCATGAGGTACTCAGGACACATAGTCCTAGTAGTACTGTCTTTTGAGGCCTCCTaGGATCCAAAATCCTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AKIHNSMRYSGHIVLVVLSFEAS*DPKSLV Trigger: GACTAAGGATTTTGGATCCCAGGAGGCCTCAAAAGA...CAGTACTACTAGGACTATGTGTCCTGAGTACCTCATGCTGTTATGAATTTTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR TCA 90 bp | TTTAAGCATTGCTCATGGTTAATGCTGCATGCTTACTATAGATCTCATGCCAATTCCTCCATTGTATCCTaGGTGTACTTCACACTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FKHCSWLMLHAYYRSHANSSIVS*VYFTLS Trigger: GGAGAGTGTGAAGTACACTCAGGATACAATGGAGGA...ATTGGCATGAGATCTATAGTAAGCATGCAGCATTAACCATGAGCAATGCTTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR TCA 90 bp | TATACACACATACTTGGAGGTGGAAGAAGCAAAGTTTCAACATTATTTTTCCCATCACTTCTCCATCCGTaGAGACAAAGAGCTGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YTHILGGGRSKVSTLFFPSLLHP*RQRAVG Trigger: CCCTACAGCTCTTTGTCTTCACGGATGGAGAAGTGA...TGGGAAAAATAATGTTGAAACTTTGCTTCTTCCACCTCCAAGTATGTGTGTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001544.12 |
||
| CDS-3UTR TCA 90 bp | TATACACACATACTTGGAGGTGGAAGAAGCAAAGTTTCAACATTATTTTTCCCACCCGGGCGATATTTTTaGTTAAACTGGTCGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YTHILGGGRSKVSTLFFPPGRYF*LNWSRL Trigger: GAGCCTCGACCAGTTTAATCAAAAATATCGCCCGGG...TGGGAAAAATAATGTTGAAACTTTGCTTCTTCCACCTCCAAGTATGTGTGTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001544.12 |
||
| CDS-3UTR TCA 90 bp | TATACACACATACTTGGAGGTGGAAGAAGCAAAGTTTCAACATTATTTTTCCCAACTGTAGAGCAAACTTaGGAGACCCAAGAGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YTHILGGGRSKVSTLFFPTVEQT*ETQEPW Trigger: CCAAGGCTCTTGGGTCTCTCAAGTTTGCTCTACAGT...TGGGAAAAATAATGTTGAAACTTTGCTTCTTCCACCTCCAAGTATGTGTGTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001544.12 |
||
| CDS-3UTR GCA 90 bp | CCACATCTTTTTAAGTTCTTTCCTATGGTAGTACTTGGATCACTAATCTGCTCCCTGAATCAAGGACTTTaGAGCCAACCGATGAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PHLFKFFPMVVLGSLICSLNQGL*SQPMNG Trigger: ACCATTCATCGGTTGGCTGCAAAGTCCTTGATTCAG...GGAGCAGATTAGTGATCCAAGTACTACCATAGGAAAGAACTTAAAAAGATGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR GCA 90 bp | TCTATGAGTTTAAAGCCATTTGTTGACCATACTACATGGCTCTGCATAGAGAATCTCCCAGGAGCCATTTaGCTTTTGGAGAGAAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SMSLKPFVDHTTWLCIENLPGAI*LLERNQ Trigger: CTGATTTCTCTCCAAAAGGCAAATGGCTCCTGGGAG...ATTCTCTATGCAGAGCCATGTAGTATGGTCAACAAATGGCTTTAAACTCATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR GCA 90 bp | AGACATCAGCAATTCTTATTAAATCATATCAGAAAGCTGAGGGCAAAACTAGACAGACTATTGGCAGCTTaGACAAGCATGGGGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RHQQFLLNHIRKLRAKLDRLLAA*TSMGME Trigger: CTCCATCCCCATGCTTGTGCAAGCTGCCAATAGTCT...GTCTAGTTTTGCCCTCAGCTTTCTGATATGATTTAATAAGAATTGCTGATGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | CCACATCTTTTTAAGTTCTTTCCTATGGTAGTACTTGGATCACTAATCTGCTCCGGGACTGTGGGTTTCTaGATGTTCAAGCAACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PHLFKFFPMVVLGSLICSGTVGF*MFKQLF Trigger: AAACAGTTGCTTGAACATCCAGAAACCCACAGTCCC...GGAGCAGATTAGTGATCCAAGTACTACCATAGGAAAGAACTTAAAAAGATGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | GGCTATTCTATGAGTTTAAAGCCATTTGTTGACCATACTACATGGCTCTGCATAGGGACTGTGGGTTTCTaGATGTTCAAGCAACTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GYSMSLKPFVDHTTWLCIGTVGF*MFKQLF Trigger: AAACAGTTGCTTGAACATCCAGAAACCCACAGTCCC...TATGCAGAGCCATGTAGTATGGTCAACAAATGGCTTTAAACTCATAGAATAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAGCATTGCTCATGGTTAATGCTGCATGCTTACTATAGATCTCATGCCAATCTTTCAATACCATGCTaGGAAGTGATGGTGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FKHCSWLMLHAYYRSHANLSIPC*EVMVAV Trigger: GACTGCCACCATCACTTCCCAGCATGGTATTGAAAG...ATTGGCATGAGATCTATAGTAAGCATGCAGCATTAACCATGAGCAATGCTTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | CCACATCTTTTTAAGTTCTTTCCTATGGTAGTACTTGGATCACTAATCTGCTCCCAGTACCCCCTAAGTTaGCTTTTAAAGCCTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: PHLFKFFPMVVLGSLICSQYPLS*LLKPSL Trigger: GAGTGAAGGCTTTAAAAGCCAACTTAGGGGGTACTG...GGAGCAGATTAGTGATCCAAGTACTACCATAGGAAAGAACTTAAAAAGATGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCAATGGGCAGGGCAAAAATTCATAACAGCATGAGGTACTCAGGACACATAGATGGTAAGTTGCTCTaGAGAAAGCATTTTAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KAMGRAKIHNSMRYSGHIDGKLL*RKHFNR Trigger: TCTGTTAAAATGCTTTCTCCAGAGCAACTTACCATC...TATGTGTCCTGAGTACCTCATGCTGTTATGAATTTTTGCCCTGCCCATTGCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | TCTATGAGTTTAAAGCCATTTGTTGACCATACTACATGGCTCTGCATAGAGAATAGCCACCAGAGAAACTaGAGTAGAACCGCATACTAC | + |
|
Preference number: 4 (lower is better) Translates to: SMSLKPFVDHTTWLCIENSHQRN*SRTAYY Trigger: GTAGTATGCGGTTCTACTCCAGTTTCTCTGGTGGCT...ATTCTCTATGCAGAGCCATGTAGTATGGTCAACAAATGGCTTTAAACTCATAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR TCA 90 bp | TATTCTATGAGTTTAAAGCCATTTGTTGACCATACTACATGGCTCTGCATAGAGTCAGTCAAGGAAACCTaGGCAGAAGTCTTGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: YSMSLKPFVDHTTWLCIESVKET*AEVLSS Trigger: AGATGACAAGACTTCTGCTCAGGTTTCCTTGACTGA...CTCTATGCAGAGCCATGTAGTATGGTCAACAAATGGCTTTAAACTCATAGAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR TCA 90 bp | TATTCTATGAGTTTAAAGCCATTTGTTGACCATACTACATGGCTCTGCATAGAGCCAAAATCCTTAGTCTaGATCAAGGACTTTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YSMSLKPFVDHTTWLCIEPKSLV*IKDFAA Trigger: GGCTGCAAAGTCCTTGATTCAGACTAAGGATTTTGG...CTCTATGCAGAGCCATGTAGTATGGTCAACAAATGGCTTTAAACTCATAGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAAATGATAGGGATAGAAAATAAGGGACTCAGTGGTCGCCAGAAAAGGCTTATGCCTTGTAAATGTTaGAGAGGGGTGTCAAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: KEMIGIENKGLSGRQKRLMPCKC*RGVSRF Trigger: AAATCTTGACACCCCTCTGCAACATTTACAAGGCAT...AAGCCTTTTCTGGCGACCACTGAGTCCCTTATTTTCTATCCCTATCATTTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAGCATTGCTCATGGTTAATGCTGCATGCTTACTATAGATCTCATGCCAATCTGAATCAAGGACTTTaGAGCCAACCGATGAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: FKHCSWLMLHAYYRSHANLNQGL*SQPMNG Trigger: ACCATTCATCGGTTGGCTGCAAAGTCCTTGATTCAG...ATTGGCATGAGATCTATAGTAAGCATGCAGCATTAACCATGAGCAATGCTTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | TATTCTATGAGTTTAAAGCCATTTGTTGACCATACTACATGGCTCTGCATAGAGAAAGAGCAGTTGGACTaGACCCTTTCAATACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: YSMSLKPFVDHTTWLCIEKEQLD*TLSIPC Trigger: GCATGGTATTGAAAGGGTCCAGTCCAACTGCTCTTT...CTCTATGCAGAGCCATGTAGTATGGTCAACAAATGGCTTTAAACTCATAGAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAGCATTGCTCATGGTTAATGCTGCATGCTTACTATAGATCTCATGCCAATCACTTCTGGGATATCTaGGTAGAAACTCACCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: FKHCSWLMLHAYYRSHANHFWDI*VETHHC Trigger: GCAATGGTGAGTTTCTACCCAGATATCCCAGAAGTG...ATTGGCATGAGATCTATAGTAAGCATGCAGCATTAACCATGAGCAATGCTTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR TCA 90 bp | CCACATCTTTTTAAGTTCTTTCCTATGGTAGTACTTGGATCACTAATCTGCTCCGACTGTTCAGAGAGCTaGTATCTTGGATTCAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: PHLFKFFPMVVLGSLICSDCSES*YLGFKI Trigger: AATCTTGAATCCAAGATATCAGCTCTCTGAACAGTC...GGAGCAGATTAGTGATCCAAGTACTACCATAGGAAAGAACTTAAAAAGATGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR TCA 90 bp | TATACACACATACTTGGAGGTGGAAGAAGCAAAGTTTCAACATTATTTTTCCCAAGCCTTGATGTCTTTTaGCTTAGTGCCCAGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: YTHILGGGRSKVSTLFFPSLDVF*LSAQDL Trigger: AAGATCCTGGGCACTAAGTCAAAAGACATCAAGGCT...TGGGAAAAATAATGTTGAAACTTTGCTTCTTCCACCTCCAAGTATGTGTGTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001544.12 |
||
| CDS-3UTR GCA 90 bp | TTTAAGCATTGCTCATGGTTAATGCTGCATGCTTACTATAGATCTCATGCCAATGGTGAAATTGTCATTTaGCTTGGGTTGCAGGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FKHCSWLMLHAYYRSHANGEIVI*LGLQGK Trigger: TTTTCCCTGCAACCCAAGGCAAATGACAATTTCACC...ATTGGCATGAGATCTATAGTAAGCATGCAGCATTAACCATGAGCAATGCTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR TCA 90 bp | CCACATCTTTTTAAGTTCTTTCCTATGGTAGTACTTGGATCACTAATCTGCTCCGATGGACAATGTTACTaGGATATTTTTCAGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PHLFKFFPMVVLGSLICSDGQCY*DIFQWY Trigger: GTACCACTGAAAAATATCTCAGTAACATTGTCCATC...GGAGCAGATTAGTGATCCAAGTACTACCATAGGAAAGAACTTAAAAAGATGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR TCA 90 bp | AGACATCAGCAATTCTTATTAAATCATATCAGAAAGCTGAGGGCAAAACTAGACTTCTTTTTCTTCTTTTaGGGCCTCCTGGGATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RHQQFLLNHIRKLRAKLDFFFFF*GLLGSK Trigger: TTTGGATCCCAGGAGGCCTCAAAAGAAGAAAAAGAA...GTCTAGTTTTGCCCTCAGCTTTCTGATATGATTTAATAAGAATTGCTGATGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAGCATTGCTCATGGTTAATGCTGCATGCTTACTATAGATCTCATGCCAATAAGAAAAGACATCTCTaGAATAGTCATCCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FKHCSWLMLHAYYRSHANKKRHL*NSHPLP Trigger: TGGAAGAGGATGACTATTCCAGAGATGTCTTTTCTT...ATTGGCATGAGATCTATAGTAAGCATGCAGCATTAACCATGAGCAATGCTTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CCA 90 bp | TCTATGAGTTTAAAGCCATTTGTTGACCATACTACATGGCTCTGCATAGAGAATGATGGTAAGTTGCTCTaGAGAAAGCATTTTAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SMSLKPFVDHTTWLCIENDGKLL*RKHFNR Trigger: TCTGTTAAAATGCTTTCTCCAGAGCAACTTACCATC...ATTCTCTATGCAGAGCCATGTAGTATGGTCAACAAATGGCTTTAAACTCATAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS TCA 90 bp | GCCGTTGGCATGCAACCAGACCACAGCCAGCACTGTGGACCAGGCTaGGGGGTCCTCATGCTTGGCAGGGTTTGCAGCCTTGATGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: AVGMQPDHSQHCGPG*GVLMLGRVCSLDVF Trigger: AAAGACATCAAGGCTGCAAACCCTGCCAAGCATGAGGACCCCTCAGCCTGGTCCACAGTGCTGGCTGTGGTCTGGTTGCATGCCAACGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS CCA 90 bp | TTAAGTCTGTGCCGTTGGCATGCAACCAGACCACAGCCAGCACTGTaGACCAGGCTGAGGGGTCCTCATGCTTGGCAGGGTTTGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSLCRWHATRPQPAL*TRLRGPHAWQGLQP Trigger: AGGCTGCAAACCCTGCCAAGCATGAGGACCCCTCAGCCTGGTCCACAGTGCTGGCTGTGGTCTGGTTGCATGCCAACGGCACAGACTTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS GCA 90 bp | CCAGCCATCACTGGCCTAGGAATCACTCTGTGGGCCAGAGGCCCCTaGACTGGTTTGTTCAGCTCCTTGTTTATGGCAATGAAGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PAITGLGITLWARGP*TGLFSSLFMAMKAV Trigger: CACAGCCTTCATTGCCATAAACAAGGAGCTGAACAAACCAGTGCAGGGGCCTCTGGCCCACAGAGTGATTCCTAGGCCAGTGATGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCCCATTCACACTTTAAGTCTGTGCCGTTGGCATGCAACCAGACCACAGCCTCTGTGCATCTCACCTaGGCAGGGTTTGCAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSHSHFKSVPLACNQTTASVHLT*AGFAAL Trigger: CAAGGCTGCAAACCCTGCCAAGGTGAGATGCACAGA...GGCTGTGGTCTGGTTGCATGCCAACGGCACAGACTTAAAGTGTGAATGGGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
||
| CDS GCA 90 bp | CCCATCTGTTTCCAAGGGCAGTTCCTGCACATACCTCAGGGTAACTaGAACCTTAGCTCCAGGCTGCAGGTTCCCCACGTTGCAAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PICFQGQFLHIPQGN*NLSSRLQVPHVARK Trigger: TTTTCTTGCAACGTGGGGAACCTGCAGCCTGGAGCTAAGGTTGCAGTTACCCTGAGGTATGTGCAGGAACTGCCCTTGGAAACAGATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS CCA 90 bp | CATCACTGGCCTAGGAATCACTCTGTGGGCCAGAGGCCCCTGCACTaGTTTGTTCAGCTCCTTGTTTATGGCAATGAAGGCTGTGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HHWPRNHSVGQRPLH*FVQLLVYGNEGCEG Trigger: TCCTTCACAGCCTTCATTGCCATAAACAAGGAGCTGAACAAACCAGTGCAGGGGCCTCTGGCCCACAGAGTGATTCCTAGGCCAGTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS CCA 90 bp | CGCATACTACTAGATCCAGCCATCACTGGCCTAGGAATCACTCTGTaGGCCAGAGGCCCCTGCACTGGTTTGTTCAGCTCCTTGTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: RILLDPAITGLGITL*ARGPCTGLFSSLFM Trigger: CATAAACAAGGAGCTGAACAAACCAGTGCAGGGGCCTCTGGCCCACAGAGTGATTCCTAGGCCAGTGATGGCTGGATCTAGTAGTATGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | AGGACACATAGTCCTAGTAGTACTGCCTCAACTGAGGAGCATCCATCATGTCTGCCCTGGAGGATGTGCTaGAGGCACACTGCTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RTHSPSSTASTEEHPSCLPWRMC*RHTAPV Trigger: CACAGGAGCAGTGTGCCTCAAGCACATCCTCCAGGG...CAGACATGATGGATGCTCCTCAGTTGAGGCAGTACTACTAGGACTATGTGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | AGACATAACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCGAGGGGTCCTCATGCTaGGCAGGGTTTGCAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RHNKSIRSSPASVRFMLAEGSSC*AGFAAL Trigger: CAAGGCTGCAAACCCTGCCAAGCATGAGGACCCCTC...GGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTTATGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS GCA 90 bp | ACTGCACACTGTAGAGCAAACTTGAGAGACCCAAGAGCCTTGGTCTaGATCCTGTCCTTGCCTGTGATAAACACTGCAGTACCCCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TAHCRANLRDPRALV*ILSLPVINTAVPPD Trigger: ATCAGGGGGTACTGCAGTGTTTATCACAGGCAAGGACAGGATGCAGACCAAGGCTCTTGGGTCTCTCAAGTTTGCTCTACAGTGTGCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | CACATAGTCCTAGTAGTACTGCCTCAACTGAGGAGCATCCATCATGTCTGTGCTAGAGACCCAAGAGCCTaGGTCTGCATCCTGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HIVLVVLPQLRSIHHVCARDPRA*VCILSL Trigger: CAAGGACAGGATGCAGACCAAGGCTCTTGGGTCTCT...AGCACAGACATGATGGATGCTCCTCAGTTGAGGCAGTACTACTAGGACTATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | AACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCAATGTTCCCTGGAGGATGTGCTaGAGGCACACTGCTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: NKSIRSSPASVRFMLANVPWRMC*RHTAPV Trigger: CACAGGAGCAGTGTGCCTCAAGCACATCCTCCAGGG...AACATTGGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS CCA 90 bp | AACTGTCTGGCTTCATGTCCAGCATCCCCATTTCCACAGCTACACTaGGGCTGTGCACTTCATTGTAGTAAATCAGGAGTTCCACATCCC | + |
|
Preference number: 5 (lower is better) Translates to: NCLASCPASPFPQLH*GCALHCSKSGVPHP Trigger: GGGATGTGGAACTCCTGATTTACTACAATGAAGTGCACAGCCCCAGTGTAGCTGTGGAAATGGGGATGCTGGACATGAAGCCAGACAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | TCAGGACACATAGTCCTAGTAGTACTGCCTCAACTGAGGAGCATCCATCATGTCGGCCCCTGCACTGGTTaGTTCAGCTCCTTGTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: SGHIVLVVLPQLRSIHHVGPCTG*FSSLFM Trigger: CATAAACAAGGAGCTGAACAAACCAGTGCAGGGGCC...GACATGATGGATGCTCCTCAGTTGAGGCAGTACTACTAGGACTATGTGTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS GCA 90 bp | GGCTTCCTCATACTCGCTGTGAGCCTTCATCTTATCCTGCAACTCTaGCACAATTTTCTTCCCATCCACCAAGGCTTCAAAGCTGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GFLILAVSLHLILQL*HNFLPIHQGFKAVD Trigger: GTCTACAGCTTTGAAGCCTTGGTGGATGGGAAGAAAATTGTGGCAGAGTTGCAGGATAAGATGAAGGCTCACAGCGAGTATGAGGAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | AGGACACATAGTCCTAGTAGTACTGCCTCAACTGAGGAGCATCCATCATGTCTGGGTAGAAACTCACCATaGCAGAAGGAGCTCCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: RTHSPSSTASTEEHPSCLGRNSP*QKELPS Trigger: TGATGGGAGCTCCTTCTGCAATGGTGAGTTTCTACC...CAGACATGATGGATGCTCCTCAGTTGAGGCAGTACTACTAGGACTATGTGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | GTGGTCGCCAGAAAAGGCTTTCCTTTCATGGGTGACATGTTTAGACGCCAAAGAGCTCCCAGGAGCCATTaGCCTTTTGGAGAGAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: VVARKGFPFMGDMFRRQRAPRSH*PFGEKS Trigger: TGATTTCTCTCCAAAAGGCAAATGGCTCCTGGGAGC...TCTTTGGCGTCTAAACATGTCACCCATGAAAGGAAAGCCTTTTCTGGCGACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
||
| CDS TCA 90 bp | ATTTTTCTCCTGGGCCCTGGCTCACTTCAACTCTCGTTATGTTCCTaGCTTCAGGAAGCACACATTCTTCCCCTTGTTTCTCTGTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: IFLLGPGSLQLSLCS*LQEAHILPLVSLCI Trigger: GATGCACAGAGAAACAAGGGGAAGAATGTGTGCTTCCTGAAGTCAGGAACATAACGAGAGTTGAAGTGAGCCAGGGCCCAGGAGAAAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
||
| CDS-3UTR CAA 90 bp | AGACATAACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCTGCAGGTTCCCCACGTaGCAAGAAAAGACATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RHNKSIRSSPASVRFMLACRFPT*QEKTSL Trigger: CAGAGATGTCTTTTCTTGCAACGTGGGGAACCTGCA...GGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTTATGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTCAGCCAGCTCCTCTTACTCTCAGGCAGCAATTTGCACTTACGAAGGAAGTCATTTGCCTTGGGTaGCAGGGAAAATGTCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: FSQPAPLTLRQQFALTKEVICLG*QGKCHP Trigger: AGGGTGACATTTTCCCTGCAACCCAAGGCAAATGAC...TTCCTTCGTAAGTGCAAATTGCTGCCTGAGAGTAAGAGGAGCTGGCTGAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001544.12 |
||
| CDS-3UTR CAA 90 bp | AGACATAACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCGTCATTTGCCTTGGGTaGCAGGGAAAATGTCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: RHNKSIRSSPASVRFMLAVICLG*QGKCHP Trigger: AGGGTGACATTTTCCCTGCAACCCAAGGCAAATGAC...GGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTTATGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | CCACATCTTTTTAAGTTCTTTCCTATGGTAGTACTTGGATCACTAATCTGCTCCGAGGGGTCCTCATGCTaGGCAGGGTTTGCAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PHLFKFFPMVVLGSLICSEGSSC*AGFAAL Trigger: CAAGGCTGCAAACCCTGCCAAGCATGAGGACCCCTC...GGAGCAGATTAGTGATCCAAGTACTACCATAGGAAAGAACTTAAAAAGATGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCAGAAGCTCCCATTCACACTTTAAGTCTGTGCCGTTGGCATGCAACCAGACACACATTCTTCCCCTaGTTTCTCTGTGCATCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: FPEAPIHTLSLCRWHATRHTFFP*FLCASH Trigger: GTGAGATGCACAGAGAAACAAGGGGAAGAATGTGTG...TCTGGTTGCATGCCAACGGCACAGACTTAAAGTGTGAATGGGAGCTTCTGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
||
| CDS-3UTR CAA 90 bp | CATAACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCAATTGCAGGTTCCCCACGTaGCAAGAAAAGACATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HNKSIRSSPASVRFMLANCRFPT*QEKTSL Trigger: CAGAGATGTCTTTTCTTGCAACGTGGGGAACCTGCA...ATTGGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | CACATAGTCCTAGTAGTACTGCCTCAACTGAGGAGCATCCATCATGTCTGTGCTTGTTCAAGCAACTGTTaGCTGACTGTTCAGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HIVLVVLPQLRSIHHVCACSSNC*LTVQRA Trigger: AGCTCTCTGAACAGTCAGCAAACAGTTGCTTGAACA...AGCACAGACATGATGGATGCTCCTCAGTTGAGGCAGTACTACTAGGACTATGTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTCAGCCAGCTCCTCTTACTCTCAGGCAGCAATTTGCACTTACGAAGGAAACCCGGGCGATATTTTaGATTAAACTGGTCGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FSQPAPLTLRQQFALTKETRAIF*IKLVEA Trigger: AGCCTCGACCAGTTTAATCAAAAATATCGCCCGGGT...TTCCTTCGTAAGTGCAAATTGCTGCCTGAGAGTAAGAGGAGCTGGCTGAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001544.12 |
||
| CDS TCA 90 bp | TTCCAAAGGGACTGTGGGTTTCTGGATGTTCAAGCAACTGTTTGCTaGCTGTTCAGAGAGCTGATATCTTGGATTCAAGATTGCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FQRDCGFLDVQATVC*LFRELISWIQDCWE Trigger: CTCCCAGCAATCTTGAATCCAAGATATCAGCTCTCTGAACAGTCAGCAAACAGTTGCTTGAACATCCAGAAACCCACAGTCCCTTTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS GCA 90 bp | AATCAAGGACTTTGCAGCCAACCGATGAATGGTGAAATTGTCATTTaGCTTGGGTTGCAGGGAAAATGTCACCCTGTTTTCCAGACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: NQGLCSQPMNGEIVI*LGLQGKCHPVFQTP Trigger: AGGAGTCTGGAAAACAGGGTGACATTTTCCCTGCAACCCAAGGCAAATGACAATTTCACCATTCATCGGTTGGCTGCAAAGTCCTTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTCAGCCAGCTCCTCTTACTCTCAGGCAGCAATTTGCACTTACGAAGGAAGGTACTGTCTCTTTGTaGCTAGTGATTAGACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: FSQPAPLTLRQQFALTKEGTVSL*LVIRPQ Trigger: CTGTGGTCTAATCACTAGCAACAAAGAGACAGTACC...TTCCTTCGTAAGTGCAAATTGCTGCCTGAGAGTAAGAGGAGCTGGCTGAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001544.12 |
||
| CDS-3UTR CAA 90 bp | AGAAGCTCCCATTCACACTTTAAGTCTGTGCCGTTGGCATGCAACCAGACCACAGAACACGCAGATTTTTaGAGGACAAGATTAGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: RSSHSHFKSVPLACNQTTEHADF*RTRLAL Trigger: AAGTGCTAATCTTGTCCTCAAAAAATCTGCGTGTTC...TGTGGTCTGGTTGCATGCCAACGGCACAGACTTAAAGTGTGAATGGGAGCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
||
| CDS-3UTR CAA 90 bp | CGCCAAAGACAGCAGGATTCACAGATAATTTCAGGAGACTATTGGCAGCTTGCATTAGTGCCCAGGATCTaGGTCAAATCTTCATCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: RQRQQDSQIISGDYWQLALVPRI*VKSSSS Trigger: GCTAGATGAAGATTTGACCAAGATCCTGGGCACTAA...TGCAAGCTGCCAATAGTCTCCTGAAATTATCTGTGAATCCTGCTGTCTTTGGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGACACATAGTCCTAGTAGTACTGCCTCAACTGAGGAGCATCCATCATGTCGAACACGCAGATTTTTaGAGGACAAGATTAGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: SGHIVLVVLPQLRSIHHVEHADF*RTRLAL Trigger: AAGTGCTAATCTTGTCCTCAAAAAATCTGCGTGTTC...GACATGATGGATGCTCCTCAGTTGAGGCAGTACTACTAGGACTATGTGTCCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | GCAAAAATTCATAACAGCATGAGGTACTCAGGACACATAGTCCTAGTAGTACTGGCTCCCAGGAGCCATTaGCCTTTTGGAGAGAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: AKIHNSMRYSGHIVLVVLAPRSH*PFGEKS Trigger: TGATTTCTCTCCAAAAGGCAAATGGCTCCTGGGAGC...CAGTACTACTAGGACTATGTGTCCTGAGTACCTCATGCTGTTATGAATTTTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | GGCTATTCTATGAGTTTAAAGCCATTTGTTGACCATACTACATGGCTCTGCATAGGTAGAAACTCACCATaGCAGAAGGAGCTCCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: GYSMSLKPFVDHTTWLCIGRNSP*QKELPS Trigger: TGATGGGAGCTCCTTCTGCAATGGTGAGTTTCTACC...TATGCAGAGCCATGTAGTATGGTCAACAAATGGCTTTAAACTCATAGAATAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAAATGATAGGGATAGAAAATAAGGGACTCAGTGGTCGCCAGAAAAGGCTTTCACTGCGTCCTCCATaGTATCCTGAGTGTACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KEMIGIENKGLSGRQKRLSLRPP*YPECTS Trigger: TGAAGTACACTCAGGATACAATGGAGGACGCAGTGA...AAGCCTTTTCTGGCGACCACTGAGTCCCTTATTTTCTATCCCTATCATTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAAATGATAGGGATAGAAAATAAGGGACTCAGTGGTCGCCAGAAAAGGCTTACTGGTCGAGGCTCCTaGTCCAATTCCAAAAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: KEMIGIENKGLSGRQKRLTGRGS*SNSKRE Trigger: TTCTCTTTTGGAATTGGACAAGGAGCCTCGACCAGT...AAGCCTTTTCTGGCGACCACTGAGTCCCTTATTTTCTATCCCTATCATTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | GCAAAAATTCATAACAGCATGAGGTACTCAGGACACATAGTCCTAGTAGTACTGACTGGTCGAGGCTCCTaGTCCAATTCCAAAAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: AKIHNSMRYSGHIVLVVLTGRGS*SNSKRE Trigger: TTCTCTTTTGGAATTGGACAAGGAGCCTCGACCAGT...CAGTACTACTAGGACTATGTGTCCTGAGTACCTCATGCTGTTATGAATTTTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | CATAACAAGTCAATCAGGAGCAGTCCAGCCTCAGTGAGATTCATGTTAGCCAATAAATTGTCATTTGCCTaGGGTTGCAGGGAAAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: HNKSIRSSPASVRFMLANKLSFA*GCRENV Trigger: GACATTTTCCCTGCAACCCAAGGCAAATGACAATTT...ATTGGCTAACATGAATCTCACTGAGGCTGGACTGCTCCTGATTGACTTGTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | ATTCATAACAGCATGAGGTACTCAGGACACATAGTCCTAGTAGTACTGCCTCAACTTCTTTTTCTTCTTTaGAGGCCTCCTGGGATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: IHNSMRYSGHIVLVVLPQLLFLL*RPPGIQ Trigger: TTGGATCCCAGGAGGCCTCAAAAGAAGAAAAAGAAG...TTGAGGCAGTACTACTAGGACTATGTGTCCTGAGTACCTCATGCTGTTATGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAAATGATAGGGATAGAAAATAAGGGACTCAGTGGTCGCCAGAAAAGGCTTTGTTCAAGCAACTGTTaGCTGACTGTTCAGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KEMIGIENKGLSGRQKRLCSSNC*LTVQRA Trigger: AGCTCTCTGAACAGTCAGCAAACAGTTGCTTGAACA...AAGCCTTTTCTGGCGACCACTGAGTCCCTTATTTTCTATCCCTATCATTTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | ATTCATAACAGCATGAGGTACTCAGGACACATAGTCCTAGTAGTACTGCCTCAAAAATTGTCATTTGCCTaGGGTTGCAGGGAAAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: IHNSMRYSGHIVLVVLPQKLSFA*GCRENV Trigger: GACATTTTCCCTGCAACCCAAGGCAAATGACAATTT...TTGAGGCAGTACTACTAGGACTATGTGTCCTGAGTACCTCATGCTGTTATGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | AGACATCAGCAATTCTTATTAAATCATATCAGAAAGCTGAGGGCAAAACTAGACGGCCCCTGCACTGGTTaGTTCAGCTCCTTGTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: RHQQFLLNHIRKLRAKLDGPCTG*FSSLFM Trigger: CATAAACAAGGAGCTGAACAAACCAGTGCAGGGGCC...GTCTAGTTTTGCCCTCAGCTTTCTGATATGATTTAATAAGAATTGCTGATGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | TCTCAGGCAGCAATTTGCACTTACGAAGGAAGGACTAATTATTGTGTTTATCTTGCTCCCAGGAGCCATTaGCCTTTTGGAGAGAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: SQAAICTYEGRTNYCVYLAPRSH*PFGEKS Trigger: TGATTTCTCTCCAAAAGGCAAATGGCTCCTGGGAGC...AAGATAAACACAATAATTAGTCCTTCCTTCGTAAGTGCAAATTGCTGCCTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001544.12 |
||
| CDS-3UTR CAA 90 bp | TCTCAGGCAGCAATTTGCACTTACGAAGGAAGGACTAATTATTGTGTTTATCTTCAGAGAGCTGATATCTaGGATTCAAGATTGCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SQAAICTYEGRTNYCVYLQRADI*DSRLLG Trigger: TCCCAGCAATCTTGAATCCAAGATATCAGCTCTCTG...AAGATAAACACAATAATTAGTCCTTCCTTCGTAAGTGCAAATTGCTGCCTGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001544.12 |
||
| CDS-3UTR CAA 90 bp | AGACATCAGCAATTCTTATTAAATCATATCAGAAAGCTGAGGGCAAAACTAGACACCCGGGCGATATTTTaGATTAAACTGGTCGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RHQQFLLNHIRKLRAKLDTRAIF*IKLVEA Trigger: AGCCTCGACCAGTTTAATCAAAAATATCGCCCGGGT...GTCTAGTTTTGCCCTCAGCTTTCTGATATGATTTAATAAGAATTGCTGATGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | TCTATGAGTTTAAAGCCATTTGTTGACCATACTACATGGCTCTGCATAGAGAATCTTCTTTTTCTTCTTTaGAGGCCTCCTGGGATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SMSLKPFVDHTTWLCIENLLFLL*RPPGIQ Trigger: TTGGATCCCAGGAGGCCTCAAAAGAAGAAAAAGAAG...ATTCTCTATGCAGAGCCATGTAGTATGGTCAACAAATGGCTTTAAACTCATAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | GCAAAAATTCATAACAGCATGAGGTACTCAGGACACATAGTCCTAGTAGTACTGGAACACGCAGATTTTTaGAGGACAAGATTAGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: AKIHNSMRYSGHIVLVVLEHADF*RTRLAL Trigger: AAGTGCTAATCTTGTCCTCAAAAAATCTGCGTGTTC...CAGTACTACTAGGACTATGTGTCCTGAGTACCTCATGCTGTTATGAATTTTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | TTTAAGCATTGCTCATGGTTAATGCTGCATGCTTACTATAGATCTCATGCCAATTTAGTGCCCAGGATCTaGGTCAAATCTTCATCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: FKHCSWLMLHAYYRSHANLVPRI*VKSSSS Trigger: GCTAGATGAAGATTTGACCAAGATCCTGGGCACTAA...ATTGGCATGAGATCTATAGTAAGCATGCAGCATTAACCATGAGCAATGCTTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | TCTATGAGTTTAAAGCCATTTGTTGACCATACTACATGGCTCTGCATAGAGAATTTAGTGCCCAGGATCTaGGTCAAATCTTCATCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SMSLKPFVDHTTWLCIENLVPRI*VKSSSS Trigger: GCTAGATGAAGATTTGACCAAGATCCTGGGCACTAA...ATTCTCTATGCAGAGCCATGTAGTATGGTCAACAAATGGCTTTAAACTCATAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS-3UTR CAA 90 bp | AGACATCAGCAATTCTTATTAAATCATATCAGAAAGCTGAGGGCAAAACTAGACGGTACTGTCTCTTTGTaGCTAGTGATTAGACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: RHQQFLLNHIRKLRAKLDGTVSL*LVIRPQ Trigger: CTGTGGTCTAATCACTAGCAACAAAGAGACAGTACC...GTCTAGTTTTGCCCTCAGCTTTCTGATATGATTTAATAAGAATTGCTGATGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS TCA 72 bp | ATGCAACCAGACCACAGCCAGCACTGTGGACCAGGCTaGGGGGTCCTCATGCTTGGCAGGGTTTGCAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: MQPDHSQHCGPG*GVLMLGRVCSL Trigger: AAGGCTGCAAACCCTGCCAAGCATGAGGACCCCTCAGCCTGGTCCACAGTGCTGGCTGTGGTCTGGTTGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS CCA 72 bp | CTAGATCCAGCCATCACTGGCCTAGGAATCACTCTGTaGGCCAGAGGCCCCTGCACTGGTTTGTTCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LDPAITGLGITL*ARGPCTGLFSS Trigger: GGAGCTGAACAAACCAGTGCAGGGGCCTCTGGCCCACAGAGTGATTCCTAGGCCAGTGATGGCTGGATCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS TCA 72 bp | CCCTGTTTTCCAGACTCCTACCCTGGAGGATGTGCTTaGGGCACACTGCTCCTGTGCTCTCCACTTGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PCFPDSYPGGCA*GTLLLCSPLEA Trigger: TGCCTCAAGTGGAGAGCACAGGAGCAGTGTGCCTCAAGCACATCCTCCAGGGTAGGAGTCTGGAAAACAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS GCA 72 bp | CAGACTCCTACCCTGGAGGATGTGCTTGAGGCACACTaGTCCTGTGCTCTCCACTTGAGGCATAAGCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: QTPTLEDVLEAH*SCALHLRHKPS Trigger: ACTGGGCTTATGCCTCAAGTGGAGAGCACAGGAGCAGTGTGCCTCAAGCACATCCTCCAGGGTAGGAGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS CCA 72 bp | GGAGTAGAACCGCATACTACTAGATCCAGCCATCACTaGCCTAGGAATCACTCTGTGGGCCAGAGGCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GVEPHTTRSSHH*PRNHSVGQRPL Trigger: CAGGGGCCTCTGGCCCACAGAGTGATTCCTAGGCCAGTGATGGCTGGATCTAGTAGTATGCGGTTCTACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS CAA 72 bp | GCCAGCACTGTGGACCAGGCTGAGGGGTCCTCATGCTaGGCAGGGTTTGCAGCCTTGATGTCTTTTGACTTA | + |
|
Preference number: 6 (lower is better) Translates to: ASTVDQAEGSSC*AGFAALMSFDL Trigger: TAAGTCAAAAGACATCAAGGCTGCAAACCCTGCCAAGCATGAGGACCCCTCAGCCTGGTCCACAGTGCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS GCA 72 bp | ACTGGCCTAGGAATCACTCTGTGGGCCAGAGGCCCCTaGACTGGTTTGTTCAGCTCCTTGTTTATGGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: TGLGITLWARGP*TGLFSSLFMAM Trigger: CATTGCCATAAACAAGGAGCTGAACAAACCAGTGCAGGGGCCTCTGGCCCACAGAGTGATTCCTAGGCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS CCA 72 bp | AGGGAAAATGTCACCCTGTTTTCCAGACTCCTACCCTaGAGGATGTGCTTGAGGCACACTGCTCCTGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RENVTLFSRLLP*RMCLRHTAPVL Trigger: GAGCACAGGAGCAGTGTGCCTCAAGCACATCCTCCAGGGTAGGAGTCTGGAAAACAGGGTGACATTTTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS CCA 72 bp | CCTAGGAATCACTCTGTGGGCCAGAGGCCCCTGCACTaGTTTGTTCAGCTCCTTGTTTATGGCAATGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PRNHSVGQRPLH*FVQLLVYGNEG Trigger: GCCTTCATTGCCATAAACAAGGAGCTGAACAAACCAGTGCAGGGGCCTCTGGCCCACAGAGTGATTCCTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS CAA 72 bp | TGGGCCAGAGGCCCCTGCACTGGTTTGTTCAGCTCCTaGTTTATGGCAATGAAGGCTGTGAAGGAGCTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: WARGPCTGLFSS*FMAMKAVKELR Trigger: CCTTAGCTCCTTCACAGCCTTCATTGCCATAAACAAGGAGCTGAACAAACCAGTGCAGGGGCCTCTGGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS CAA 72 bp | GCTGAGGGGTCCTCATGCTTGGCAGGGTTTGCAGCCTaGATGTCTTTTGACTTAGTGCCCAGGATCTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: AEGSSCLAGFAA*MSFDLVPRILV Trigger: GACCAAGATCCTGGGCACTAAGTCAAAAGACATCAAGGCTGCAAACCCTGCCAAGCATGAGGACCCCTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS CAA 90 bp | ATCACTCTGTGGGCCAGAGGCCCCTGCACTGGTTTGTTCAGCTCCTaGTTTATGGCAATGAAGGCTGTGAAGGAGCTAAGGACTCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ITLWARGPCTGLFSS*FMAMKAVKELRTPD Trigger: GTCTGGAGTCCTTAGCTCCTTCACAGCCTTCATTGCCATAAACAAGGAGCTGAACAAACCAGTGCAGGGGCCTCTGGCCCACAGAGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS CAA 90 bp | ACTGGCCTAGGAATCACTCTGTGGGCCAGAGGCCCCTGCACTGGTTaGTTCAGCTCCTTGTTTATGGCAATGAAGGCTGTGAAGGAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: TGLGITLWARGPCTG*FSSLFMAMKAVKEL Trigger: TAGCTCCTTCACAGCCTTCATTGCCATAAACAAGGAGCTGAACAAACCAGTGCAGGGGCCTCTGGCCCACAGAGTGATTCCTAGGCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS GCA 72 bp | TCAGCAACAGCAACAGAGTTTCCTTGGCAGCCTCGATaGGTAGCTGAGAATTGTTCTCTGTGCTCATGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SATATEFPWQPR*VAENCSLCSWG Trigger: CCCCCATGAGCACAGAGAACAATTCTCAGCTACGCATCGAGGCTGCCAAGGAAACTCTGTTGCTGTTGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS CAA 90 bp | GGATGTTCAAGCAACTGTTTGCTGACTGTTCAGAGAGCTGATATCTaGGATTCAAGATTGCTGGGAGCAGGTAGCGCAGGGCCCCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: GCSSNCLLTVQRADI*DSRLLGAGSAGPHL Trigger: CAGATGGGGCCCTGCGCTACCTGCTCCCAGCAATCTTGAATCCAAGATATCAGCTCTCTGAACAGTCAGCAAACAGTTGCTTGAACATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS CCA 72 bp | CTGTTCAGAGAGCTGATATCTTGGATTCAAGATTGCTaGGAGCAGGTAGCGCAGGGCCCCATCTGTTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LFRELISWIQDC*EQVAQGPICFQ Trigger: TTGGAAACAGATGGGGCCCTGCGCTACCTGCTCCCAGCAATCTTGAATCCAAGATATCAGCTCTCTGAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS CAA 72 bp | GATGTGCTTGAGGCACACTGCTCCTGTGCTCTCCACTaGAGGCATAAGCCCAGTCAGTTGTGCATAGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: DVLEAHCSCALH*RHKPSQLCIDD Trigger: ATCATCTATGCACAACTGACTGGGCTTATGCCTCAAGTGGAGAGCACAGGAGCAGTGTGCCTCAAGCACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS CAA 90 bp | TTATCCACTGCACACTGTAGAGCAAACTTGAGAGACCCAAGAGCCTaGGTCTGCATCCTGTCCTTGCCTGTGATAAACACTGCAGTACCC | + |
|
Preference number: 6 (lower is better) Translates to: LSTAHCRANLRDPRA*VCILSLPVINTAVP Trigger: GGGTACTGCAGTGTTTATCACAGGCAAGGACAGGATGCAGACCAAGGCTCTTGGGTCTCTCAAGTTTGCTCTACAGTGTGCAGTGGATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS CAA 90 bp | TCCCAACTTAGAGAGATGTTATCCACTGCACACTGTAGAGCAAACTaGAGAGACCCAAGAGCCTTGGTCTGCATCCTGTCCTTGCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SQLREMLSTAHCRAN*RDPRALVCILSLPV Trigger: CACAGGCAAGGACAGGATGCAGACCAAGGCTCTTGGGTCTCTCAAGTTTGCTCTACAGTGTGCAGTGGATAACATCTCTCTAAGTTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS CAA 90 bp | TCAGGAAGCACACATTCTTCCCCTTGTTTCTCTGTGCATCTCACCTaGGCAGGGTTTGCAGCCTTGATGTCTTTTGACTTAGTGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SGSTHSSPCFSVHLT*AGFAALMSFDLVPR Trigger: CCTGGGCACTAAGTCAAAAGACATCAAGGCTGCAAACCCTGCCAAGGTGAGATGCACAGAGAAACAAGGGGAAGAATGTGTGCTTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
||
| CDS TCA 72 bp | TGCTCATGGGGGAGTCCATACTTCCTGAACGGTCCATaGGAAACACAAATTCTCCACAGGCCTTTGAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: CSWGSPYFLNGP*ETQILHRPLRL Trigger: AAGCCTCAAAGGCCTGTGGAGAATTTGTGTTTCTCATGGACCGTTCAGGAAGTATGGACTCCCCCATGAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS TCA 72 bp | GAGAGATGTTATCCACTGCACACTGTAGAGCAAACTTaGGAGACCCAAGAGCCTTGGTCTGCATCCTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ERCYPLHTVEQT*ETQEPWSASCP Trigger: AGGACAGGATGCAGACCAAGGCTCTTGGGTCTCTCAAGTTTGCTCTACAGTGTGCAGTGGATAACATCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS GCA 72 bp | CTCAAAGAGCAGTTGGACTGGACCCTTTCAATACCATaGTGGGAAGTGATGGTGGCAGTCATGTTGAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LKEQLDWTLSIP*WEVMVAVMLSV Trigger: CACACTCAACATGACTGCCACCATCACTTCCCAGCATGGTATTGAAAGGGTCCAGTCCAACTGCTCTTTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS CAA 72 bp | AGCAACTGTTTGCTGACTGTTCAGAGAGCTGATATCTaGGATTCAAGATTGCTGGGAGCAGGTAGCGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SNCLLTVQRADI*DSRLLGAGSAG Trigger: CCCTGCGCTACCTGCTCCCAGCAATCTTGAATCCAAGATATCAGCTCTCTGAACAGTCAGCAAACAGTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS CAA 72 bp | GCACACTGTAGAGCAAACTTGAGAGACCCAAGAGCCTaGGTCTGCATCCTGTCCTTGCCTGTGATAAACACT | + |
|
Preference number: 6 (lower is better) Translates to: AHCRANLRDPRA*VCILSLPVINT Trigger: AGTGTTTATCACAGGCAAGGACAGGATGCAGACCAAGGCTCTTGGGTCTCTCAAGTTTGCTCTACAGTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS CAA 72 bp | TTCTCTGTGCATCTCACCTTGGCAGGGTTTGCAGCCTaGATGTCTTTTGACTTAGTGCCCAGGATCTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: FSVHLTLAGFAA*MSFDLVPRILV Trigger: GACCAAGATCCTGGGCACTAAGTCAAAAGACATCAAGGCTGCAAACCCTGCCAAGGTGAGATGCACAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
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| CDS CAA 90 bp | CTTTGCAGCCAACCGATGAATGGTGAAATTGTCATTTGCCTTGGGTaGCAGGGAAAATGTCACCCTGTTTTCCAGACTCCTACCCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LCSQPMNGEIVICLG*QGKCHPVFQTPTLE Trigger: CTCCAGGGTAGGAGTCTGGAAAACAGGGTGACATTTTCCCTGCAACCCAAGGCAAATGACAATTTCACCATTCATCGGTTGGCTGCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS TCA 72 bp | ATTGTTCTCTGTGCTCATGGGGGAGTCCATACTTCCTaGACGGTCCATGAGAAACACAAATTCTCCACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: IVLCAHGGVHTS*TVHEKHKFSTG Trigger: GCCTGTGGAGAATTTGTGTTTCTCATGGACCGTTCAGGAAGTATGGACTCCCCCATGAGCACAGAGAACAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS TCA 72 bp | ACACTGCAGTACCCCCTGATACCCGGGCGATATTTTTaGTTAAACTGGTCGAGGCTCCTTGTCCAATTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: TLQYPLIPGRYF*LNWSRLLVQFQ Trigger: TTGGAATTGGACAAGGAGCCTCGACCAGTTTAATCAAAAATATCGCCCGGGTATCAGGGGGTACTGCAGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS GCA 72 bp | TGTAGAGCAAACTTGAGAGACCCAAGAGCCTTGGTCTaGATCCTGTCCTTGCCTGTGATAAACACTGCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: CRANLRDPRALV*ILSLPVINTAV Trigger: TACTGCAGTGTTTATCACAGGCAAGGACAGGATGCAGACCAAGGCTCTTGGGTCTCTCAAGTTTGCTCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS CAA 72 bp | CTTCCACTTCTGGGATATCTGGGTAGAAACTCACCATaGCAGAAGGAGCTCCCATCAAACTGTCTGGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LPLLGYLGRNSP*QKELPSNCLAS Trigger: TGAAGCCAGACAGTTTGATGGGAGCTCCTTCTGCAATGGTGAGTTTCTACCCAGATATCCCAGAAGTGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS CAA 72 bp | AACACTGCAGTACCCCCTGATACCCGGGCGATATTTTaGATTAAACTGGTCGAGGCTCCTTGTCCAATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: NTAVPPDTRAIF*IKLVEAPCPIP Trigger: TGGAATTGGACAAGGAGCCTCGACCAGTTTAATCAAAAATATCGCCCGGGTATCAGGGGGTACTGCAGTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS CAA 90 bp | TCCCCTTGTTTCTCTGTGCATCTCACCTTGGCAGGGTTTGCAGCCTaGATGTCTTTTGACTTAGTGCCCAGGATCTTGGTCAAATCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SPCFSVHLTLAGFAA*MSFDLVPRILVKSS Trigger: TGAAGATTTGACCAAGATCCTGGGCACTAAGTCAAAAGACATCAAGGCTGCAAACCCTGCCAAGGTGAGATGCACAGAGAAACAAGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
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| CDS CAA 90 bp | AACTCTCGTTATGTTCCTGACTTCAGGAAGCACACATTCTTCCCCTaGTTTCTCTGTGCATCTCACCTTGGCAGGGTTTGCAGCCTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: NSRYVPDFRKHTFFP*FLCASHLGRVCSLD Trigger: ATCAAGGCTGCAAACCCTGCCAAGGTGAGATGCACAGAGAAACAAGGGGAAGAATGTGTGCTTCCTGAAGTCAGGAACATAACGAGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
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| CDS TCA 72 bp | CTCATGCTTGGCAGGGTTTGCAGCCTTGATGTCTTTTaGCTTAGTGCCCAGGATCTTGGTCAAATCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: LMLGRVCSLDVF*LSAQDLGQIFI Trigger: GATGAAGATTTGACCAAGATCCTGGGCACTAAGTCAAAAGACATCAAGGCTGCAAACCCTGCCAAGCATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS TCA 72 bp | TCTCACCTTGGCAGGGTTTGCAGCCTTGATGTCTTTTaGCTTAGTGCCCAGGATCTTGGTCAAATCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: SHLGRVCSLDVF*LSAQDLGQIFI Trigger: GATGAAGATTTGACCAAGATCCTGGGCACTAAGTCAAAAGACATCAAGGCTGCAAACCCTGCCAAGGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
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| CDS CAA 72 bp | GCAGCCTTGATGTCTTTTGACTTAGTGCCCAGGATCTaGGTCAAATCTTCATCTAGCTCCCAGGAGCCATTT | + |
|
Preference number: 6 (lower is better) Translates to: AALMSFDLVPRI*VKSSSSSQEPF Trigger: AAATGGCTCCTGGGAGCTAGATGAAGATTTGACCAAGATCCTGGGCACTAAGTCAAAAGACATCAAGGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 ENSMUST00000137972.2 |
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| CDS CAA 90 bp | GGTCTTCCAAAGGGACTGTGGGTTTCTGGATGTTCAAGCAACTGTTaGCTGACTGTTCAGAGAGCTGATATCTTGGATTCAAGATTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GLPKGLWVSGCSSNC*LTVQRADILDSRLL Trigger: CAGCAATCTTGAATCCAAGATATCAGCTCTCTGAACAGTCAGCAAACAGTTGCTTGAACATCCAGAAACCCACAGTCCCTTTGGAAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS TCA 72 bp | GCCTTCACTCTTTTCACTGCGTCCTCCATTGTATCCTaGGTGTACTTCACACTCTCCGGAAAGAATTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: AFTLFTASSIVS*VYFTLSGKNFS Trigger: TGAGAAATTCTTTCCGGAGAGTGTGAAGTACACTCAGGATACAATGGAGGACGCAGTGAAAAGAGTGAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS GCA 72 bp | ATACTCGCTGTGAGCCTTCATCTTATCCTGCAACTCTaGCACAATTTTCTTCCCATCCACCAAGGCTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: ILAVSLHLILQL*HNFLPIHQGFK Trigger: TTTGAAGCCTTGGTGGATGGGAAGAAAATTGTGGCAGAGTTGCAGGATAAGATGAAGGCTCACAGCGAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS GCA 72 bp | CTTTGCAGCCAACCGATGAATGGTGAAATTGTCATTTaGCTTGGGTTGCAGGGAAAATGTCACCCTGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LCSQPMNGEIVI*LGLQGKCHPVF Trigger: GAAAACAGGGTGACATTTTCCCTGCAACCCAAGGCAAATGACAATTTCACCATTCATCGGTTGGCTGCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS CCA 72 bp | GCTGCAGGTTCCCCACGTTGCAAGAAAAGACATCTCTaGAATAGTCATCCTCTTCCAATAAGTATGCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: AAGSPRCKKRHL*NSHPLPISMLG Trigger: ACCAAGCATACTTATTGGAAGAGGATGACTATTCCAGAGATGTCTTTTCTTGCAACGTGGGGAACCTGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS CAA 72 bp | CAACCGATGAATGGTGAAATTGTCATTTGCCTTGGGTaGCAGGGAAAATGTCACCCTGTTTTCCAGACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: QPMNGEIVICLG*QGKCHPVFQTP Trigger: AGGAGTCTGGAAAACAGGGTGACATTTTCCCTGCAACCCAAGGCAAATGACAATTTCACCATTCATCGGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS CAA 72 bp | ACACATTCTTCCCCTTGTTTCTCTGTGCATCTCACCTaGGCAGGGTTTGCAGCCTTGATGTCTTTTGACTTA | + |
|
Preference number: 6 (lower is better) Translates to: THSSPCFSVHLT*AGFAALMSFDL Trigger: TAAGTCAAAAGACATCAAGGCTGCAAACCCTGCCAAGGTGAGATGCACAGAGAAACAAGGGGAAGAATGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137972.2 |
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| CDS CAA 72 bp | CTTTTAAAGCCTTCACTCTTTTCACTGCGTCCTCCATaGTATCCTGAGTGTACTTCACACTCTCCGGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LLKPSLFSLRPP*YPECTSHSPER Trigger: TCTTTCCGGAGAGTGTGAAGTACACTCAGGATACAATGGAGGACGCAGTGAAAAGAGTGAAGGCTTTAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS TCA 72 bp | GACTGTGGGTTTCTGGATGTTCAAGCAACTGTTTGCTaGCTGTTCAGAGAGCTGATATCTTGGATTCAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: DCGFLDVQATVC*LFRELISWIQD Trigger: ATCTTGAATCCAAGATATCAGCTCTCTGAACAGTCAGCAAACAGTTGCTTGAACATCCAGAAACCCACAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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| CDS GCA 72 bp | CTGGGATCCAAAATCCTTAGTCTGAATCAAGGACTTTaGAGCCAACCGATGAATGGTGAAATTGTCATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LGSKILSLNQGL*SQPMNGEIVIC Trigger: GCAAATGACAATTTCACCATTCATCGGTTGGCTGCAAAGTCCTTGATTCAGACTAAGGATTTTGGATCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS CAA 90 bp | CTAAGTTGGCTTTTAAAGCCTTCACTCTTTTCACTGCGTCCTCCATaGTATCCTGAGTGTACTTCACACTCTCCGGAAAGAATTTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LSWLLKPSLFSLRPP*YPECTSHSPERISH Trigger: ATGAGAAATTCTTTCCGGAGAGTGTGAAGTACACTCAGGATACAATGGAGGACGCAGTGAAAAGAGTGAAGGCTTTAAAAGCCAACTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
||
| CDS TCA 72 bp | CACAGCAGCCACAAATTCATTGATGGACAATGTTACTaGGATATTTTTCAGTGGTACTGTCTCTTTGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: HSSHKFIDGQCY*DIFQWYCLFVA Trigger: AGCAACAAAGAGACAGTACCACTGAAAAATATCTCAGTAACATTGTCCATCAATGAATTTGTGGCTGCTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 ENSMUST00000129598.2 |
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| CDS TCA 72 bp | AATTTAAGGTTGCCACCACAGCAGCCACAAATTCATTaGTGGACAATGTTACTGAGATATTTTTCAGTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: NLRLPPQQPQIH*WTMLLRYFSVV Trigger: TACCACTGAAAAATATCTCAGTAACATTGTCCATCAATGAATTTGTGGCTGCTGTGGTGGCAACCTTAAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001544.12 ENSMUST00000118144.8 |
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