Pregenerated sensors for VWA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025082Ensembl transcript IDs: ENSMUST00000026068.8
Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGAAGAAAATGTGGGTCAGAGACGGGGAGAGCATCCTGCAGACGTaGAGTAGCACCTCAGCCAGCCAGCCTGGCACACAGAACACAAAC | + |
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Preference number: 1 (lower is better) Translates to: RKKMWVRDGESILQT*SSTSASQPGTQNTN Trigger: GTTTGTGTTCTGTGTGCCAGGCTGGCTGGCTGAGGTGCTACTCCACGTCTGCAGGATGCTCTCCCCGTCTCTGACCCACATTTTCTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR GCA 90 bp | AAATGTGAAGGAAGAAAATGTGGGTCAGAGACGGGGAGAGCATCCTaGAGACGTGGAGTAGCACCTCAGCCAGCCAGCCTGGCACACAGA | + |
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Preference number: 1 (lower is better) Translates to: KCEGRKCGSETGRAS*RRGVAPQPASLAHR Trigger: TCTGTGTGCCAGGCTGGCTGGCTGAGGTGCTACTCCACGTCTGCAGGATGCTCTCCCCGTCTCTGACCCACATTTTCTTCCTTCACATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR GCA 90 bp | CCAGACCAATCGTACACGGCTGTTCACACATGTCCCTCCCCTACGTaGAAACTGAGTAATTGGTCAAATGGCTGTCTGAGACCTTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: PDQSYTAVHTCPSPT*KLSNWSNGCLRPSQ Trigger: CTGGGAAGGTCTCAGACAGCCATTTGACCAATTACTCAGTTTGCACGTAGGGGAGGGACATGTGTGAACAGCCGTGTACGATTGGTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR TCA 90 bp | TTACCAATGCTTCTCATCTCCCAGAGCGCTACACATGGCTTCTTCTaGAAACCCAGCTTCAAACAGCACAAGAAAGGGGCAGGGTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: LPMLLISQSATHGFF*KPSFKQHKKGAGWG Trigger: TCCCCACCCTGCCCCTTTCTTGTGCTGTTTGAAGCTGGGTTTTCAGAAGAAGCCATGTGTAGCGCTCTGGGAGATGAGAAGCATTGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR GCA 90 bp | AGCATCTGTGATGACCCTCAAGCAGGTCGTCAGATCTCTCTGGCCTaGCTCTTATCCTCAGGAAAAATGACAGGCAGCTTACCTCAGCAA | + |
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Preference number: 1 (lower is better) Translates to: SICDDPQAGRQISLA*LLSSGKMTGSLPQQ Trigger: TTGCTGAGGTAAGCTGCCTGTCATTTTTCCTGAGGATAAGAGGCAGGCCAGAGAGATCTGACGACCTGCTTGAGGGTCATCACAGATGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR CCA 90 bp | AGCCAGCCAGCCTGGCACACAGAACACAAACAGAGTTTACAGCATTaGCTGCACAAAGATACACACCCTTACCAATGCTTCTCATCTCCC | + |
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Preference number: 1 (lower is better) Translates to: SQPAWHTEHKQSLQH*LHKDTHPYQCFSSP Trigger: GGGAGATGAGAAGCATTGGTAAGGGTGTGTATCTTTGTGCAGCCAATGCTGTAAACTCTGTTTGTGTTCTGTGTGCCAGGCTGGCTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR GCA 90 bp | AGCCAGCCTGGCACACAGAACACAAACAGAGTTTACAGCATTGGCTaGACAAAGATACACACCCTTACCAATGCTTCTCATCTCCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: SQPGTQNTNRVYSIG*TKIHTLTNASHLPE Trigger: CTCTGGGAGATGAGAAGCATTGGTAAGGGTGTGTATCTTTGTGCAGCCAATGCTGTAAACTCTGTTTGTGTTCTGTGTGCCAGGCTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR CCA 90 bp | ATACACACCCTTACCAATGCTTCTCATCTCCCAGAGCGCTACACATaGCTTCTTCTGAAAACCCAGCTTCAAACAGCACAAGAAAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: IHTLTNASHLPERYT*LLLKTQLQTAQERG Trigger: GCCCCTTTCTTGTGCTGTTTGAAGCTGGGTTTTCAGAAGAAGCCATGTGTAGCGCTCTGGGAGATGAGAAGCATTGGTAAGGGTGTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR TCA 90 bp | CCCAAAGATATTCCAAAGAAGCCTCGTTGCCAGCGGATACAGTCCTaGTGGACGAACAACCAACCAATCTGTCTTGAGACATTACCGAGT | + |
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Preference number: 1 (lower is better) Translates to: PKDIPKKPRCQRIQS*WTNNQPICLETLPS Trigger: ACTCGGTAATGTCTCAAGACAGATTGGTTGGTTGTTCGTCCATCAGGACTGTATCCGCTGGCAACGAGGCTTCTTTGGAATATCTTTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR GCA 90 bp | CAGAGTTTACAGCATTGGCTGCACAAAGATACACACCCTTACCAATaGTTCTCATCTCCCAGAGCGCTACACATGGCTTCTTCTGAAAAC | + |
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Preference number: 1 (lower is better) Translates to: QSLQHWLHKDTHPYQ*FSSPRALHMASSEN Trigger: GTTTTCAGAAGAAGCCATGTGTAGCGCTCTGGGAGATGAGAAGCATTGGTAAGGGTGTGTATCTTTGTGCAGCCAATGCTGTAAACTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR TCA 90 bp | AGGTCTCTCCCACACACAGATCTGGTCACCAGAAAACGTCACAAATaGCACATAATCCCTTTGCAAATGAAATCCACAGGAGCTGTCTTT | + |
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Preference number: 1 (lower is better) Translates to: RSLPHTDLVTRKRHK*HIIPLQMKSTGAVF Trigger: AAAGACAGCTCCTGTGGATTTCATTTGCAAAGGGATTATGTGTCATTTGTGACGTTTTCTGGTGACCAGATCTGTGTGTGGGAGAGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTCAGCGCCCAGACCAATCGTACACGGCTGTTCACACATGTCCCTCCCCTACCCAGGCGGTGAGCTCTaGCAGAGTCTTCTTCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: CSAPRPIVHGCSHMSLPYPGGEL*QSLLQS Trigger: GCTTTGAAGAAGACTCTGTCAGAGCTCACCGCCTGG...GTAGGGGAGGGACATGTGTGAACAGCCGTGTACGATTGGTCTGGGCGCTGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTACTGTGACTACAGCTGCACGGGTGTTTGGGAAGTCCTGGTGTTCCACGAACCCCTGTGGCAGAGCTaGAAGCTGATGCTCCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: RYCDYSCTGVWEVLVFHEPLWQS*KLMLQG Trigger: GCCCTGGAGCATCAGCTTCCAGCTCTGCCACAGGGG...TTCGTGGAACACCAGGACTTCCCAAACACCCGTGCAGCTGTAGTCACAGTACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAATGAAATCCACAGGAGCTGTCTTTTGGAACAGGGAGAAACCCACTTTTTGGGCAGAGCTGGAAGCTaGTGCTCCAGGGCCCCCGGG | + |
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Preference number: 2 (lower is better) Translates to: ANEIHRSCLLEQGETHFLGRAGS*CSRAPG Trigger: CCCGGGGGCCCTGGAGCATCAGCTTCCAGCTCTGCC...CAAAAAGTGGGTTTCTCCCTGTTCCAAAAGACAGCTCCTGTGGATTTCATTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGAGGCCGTTGCTCAGCGCCCAGACCAATCGTACACGGCTGTTCACACATGTCAGATCTCTCTGGCCTaGCTCTTATCCTCAGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: LEAVAQRPDQSYTAVHTCQISLA*LLSSGK Trigger: TTTTCCTGAGGATAAGAGGCAGGCCAGAGAGATCTG...ACATGTGTGAACAGCCGTGTACGATTGGTCTGGGCGCTGAGCAACGGCCTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR CAA 90 bp | GTAAGCTTTGAAAGCAAACCTCCTGGGCAACCCCTCATCCCTCCCTaGCTGAGTTTGAGAAGTCTGCCCATCATTGCCACCACTAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: VSFESKPPGQPLIPP*LSLRSLPIIATTKR Trigger: CCTCTTAGTGGTGGCAATGATGGGCAGACTTCTCAAACTCAGCAAGGGAGGGATGAGGGGTTGCCCAGGAGGTTTGCTTTCAAAGCTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTTTGGGAAGTCCTGGTGTTCCACGAAGACATCAGCACTATTCTGCTGTGACCTCCTGAGTAATCTCTaGAAGGAAGCCCCTCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: VFGKSWCSTKTSALFCCDLLSNL*KEAPLE Trigger: CTCCAGAGGGGCTTCCTTTCAGAGATTACTCAGGAG...GTCACAGCAGAATAGTGCTGATGTCTTCGTGGAACACCAGGACTTCCCAAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR CAA 90 bp | CAGCCAGCCAGCCTGGCACACAGAACACAAACAGAGTTTACAGCATaGGCTGCACAAAGATACACACCCTTACCAATGCTTCTCATCTCC | + |
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Preference number: 2 (lower is better) Translates to: QPASLAHRTQTEFTA*AAQRYTPLPMLLIS Trigger: GGAGATGAGAAGCATTGGTAAGGGTGTGTATCTTTGTGCAGCCAATGCTGTAAACTCTGTTTGTGTTCTGTGTGCCAGGCTGGCTGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTATAAATGTGAAGGAAGAAAATGTGGGTCAGAGACGGGGAGAGCATCCTGCCAGCGGATACAGTCCTaGTGGACGAACAACCAACCA | + |
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Preference number: 2 (lower is better) Translates to: VYKCEGRKCGSETGRASCQRIQS*WTNNQP Trigger: TGGTTGGTTGTTCGTCCATCAGGACTGTATCCGCTG...GCAGGATGCTCTCCCCGTCTCTGACCCACATTTTCTTCCTTCACATTTATACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGGGAAGTCCTGGTGTTCCACGAAGACATCAGCACTATTCTGCTGTGACAATAAGCAGTGTCCCCTGTaGCAGAGCTGGAAGCTGATG | + |
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Preference number: 2 (lower is better) Translates to: FGKSWCSTKTSALFCCDNKQCPL*QSWKLM Trigger: CATCAGCTTCCAGCTCTGCCACAGGGGACACTGCTT...ATTGTCACAGCAGAATAGTGCTGATGTCTTCGTGGAACACCAGGACTTCCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGGGAAGTCCTGGTGTTCCACGAAGACATCAGCACTATTCTGCTGTGACAATTGTCCCTCCCCTACGTaGAAACTGAGTAATTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: FGKSWCSTKTSALFCCDNCPSPT*KLSNWS Trigger: TGACCAATTACTCAGTTTGCACGTAGGGGAGGGACA...ATTGTCACAGCAGAATAGTGCTGATGTCTTCGTGGAACACCAGGACTTCCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR CAA 90 bp | ATGACACATAATCCCTTTGCAAATGAAATCCACAGGAGCTGTCTTTaGGAACAGGGAGAAACCCACTTTTTGCACCAATCACCAGGCGGT | + |
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Preference number: 2 (lower is better) Translates to: MTHNPFANEIHRSCL*EQGETHFLHQSPGG Trigger: ACCGCCTGGTGATTGGTGCAAAAAGTGGGTTTCTCCCTGTTCCAAAAGACAGCTCCTGTGGATTTCATTTGCAAAGGGATTATGTGTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR-3UTR TCA 90 bp | CGAAGACATCAGCACTATTCTGCTGTGACAATGTCTACATATTGGTTCGATGATCCAACCAATCTGTCTTaGGACATTACCGAGTGGGCG | + |
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Preference number: 2 (lower is better) Translates to: RRHQHYSAVTMSTYWFDDPTNLS*DITEWA Trigger: CGCCCACTCGGTAATGTCTCAAGACAGATTGGTTGG...ATCATCGAACCAATATGTAGACATTGTCACAGCAGAATAGTGCTGATGTCTTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGGTCACCAGAAAACGTCACAAATGACACATAATCCCTTTGCAAATGAAATCCACCATAGCGACAGCTaGTACTGTCCCAAGCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: SGHQKTSQMTHNPFANEIHHSDS*YCPKQC Trigger: ACACTGCTTGGGACAGTAGCAGCTGTCGCTATGGTG...GATTTCATTTGCAAAGGGATTATGTGTCATTTGTGACGTTTTCTGGTGACCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR-3UTR GCA 90 bp | CGAAGACATCAGCACTATTCTGCTGTGACAATGTCTACATATTGGTTCGATGATGAGAAACCCACTTTTTaGACCAATCACCAGGCGGTG | + |
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Preference number: 2 (lower is better) Translates to: RRHQHYSAVTMSTYWFDDEKPTF*TNHQAV Trigger: CACCGCCTGGTGATTGGTGCAAAAAGTGGGTTTCTC...ATCATCGAACCAATATGTAGACATTGTCACAGCAGAATAGTGCTGATGTCTTCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR-3UTR GCA 90 bp | CGAAGACATCAGCACTATTCTGCTGTGACAATGTCTACATATTGGTTCGATGATCGAGTGGGCGTGAGATaGACATTAAAACAGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: RRHQHYSAVTMSTYWFDDRVGVR*TLKQSS Trigger: GCTGCTCTGTTTTAATGTGCATCTCACGCCCACTCG...ATCATCGAACCAATATGTAGACATTGTCACAGCAGAATAGTGCTGATGTCTTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR-3UTR TCA 90 bp | CGAAGACATCAGCACTATTCTGCTGTGACAATGTCTACATATTGGTTCGATGATTATCCTCAGGAAAAATaGCAGGCAGCTTACCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: RRHQHYSAVTMSTYWFDDYPQEK*QAAYLS Trigger: GCTGAGGTAAGCTGCCTGTCATTTTTCCTGAGGATA...ATCATCGAACCAATATGTAGACATTGTCACAGCAGAATAGTGCTGATGTCTTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR CCA 72 bp | AGCGACAGCTGCTACTGTCCCAAGCAGTGTCCCCTGTaGCAGAGCTGGAAGCTGATGCTCCAGGGCCCCCGG | + |
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Preference number: 3 (lower is better) Translates to: SDSCYCPKQCPL*QSWKLMLQGPR Trigger: CCGGGGGCCCTGGAGCATCAGCTTCCAGCTCTGCCACAGGGGACACTGCTTGGGACAGTAGCAGCTGTCGCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR CCA 72 bp | ATGTGGGTCAGAGACGGGGAGAGCATCCTGCAGACGTaGAGTAGCACCTCAGCCAGCCAGCCTGGCACACAG | + |
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Preference number: 3 (lower is better) Translates to: MWVRDGESILQT*SSTSASQPGTQ Trigger: CTGTGTGCCAGGCTGGCTGGCTGAGGTGCTACTCCACGTCTGCAGGATGCTCTCCCCGTCTCTGACCCACAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR TCA 72 bp | GGCAGCACTCACTGCCACTCTCTCCTGAGTAATCTCTaGAAGGAAGCCCCTCTGGAGGCCGTTGCTCAGCGC | + |
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Preference number: 3 (lower is better) Translates to: GSTHCHSLLSNL*KEAPLEAVAQR Trigger: GCGCTGAGCAACGGCCTCCAGAGGGGCTTCCTTTCAGAGATTACTCAGGAGAGAGTGGCAGTGAGTGCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR GCA 72 bp | CGCAGTAGTCGTTCCCAACATCACCATAGCGACAGCTaGTACTGTCCCAAGCAGTGTCCCCTGTGGCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: RSSRSQHHHSDS*YCPKQCPLWQS Trigger: GCTCTGCCACAGGGGACACTGCTTGGGACAGTAGCAGCTGTCGCTATGGTGATGTTGGGAACGACTACTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR-3UTR CAA 90 bp | AGGTACTGTGACTACAGCTGCACGGGTGTTTGGGAAGTCCTGGTGTTCCACGAACCCCTCATCCCTCCCTaGCTGAGTTTGAGAAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: RYCDYSCTGVWEVLVFHEPLIPP*LSLRSL Trigger: CAGACTTCTCAAACTCAGCAAGGGAGGGATGAGGGG...TTCGTGGAACACCAGGACTTCCCAAACACCCGTGCAGCTGTAGTCACAGTACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR TCA 72 bp | ACCCACTTTTTGCACCAATCACCAGGCGGTGAGCTCTaGCAGAGTCTTCTTCAAAGCGCTACCACCTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: THFLHQSPGGEL*QSLLQSATTSG Trigger: TCCTGAGGTGGTAGCGCTTTGAAGAAGACTCTGTCAGAGCTCACCGCCTGGTGATTGGTGCAAAAAGTGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR GCA 72 bp | GGACAGGAGTTTACAGGAAGGTACTGTGACTACAGCTaGACGGGTGTTTGGGAAGTCCTGGTGTTCCACGAA | + |
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Preference number: 3 (lower is better) Translates to: GQEFTGRYCDYS*TGVWEVLVFHE Trigger: TTCGTGGAACACCAGGACTTCCCAAACACCCGTGCAGCTGTAGTCACAGTACCTTCCTGTAAACTCCTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR CCA 72 bp | CACACATGTCCCTCCCCTACGTGCAAACTGAGTAATTaGTCAAATGGCTGTCTGAGACCTTCCCAGGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: HTCPSPTCKLSN*SNGCLRPSQVS Trigger: AGAGACCTGGGAAGGTCTCAGACAGCCATTTGACCAATTACTCAGTTTGCACGTAGGGGAGGGACATGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR CCA 72 bp | ACTGTGACTACAGCTGCACGGGTGTTTGGGAAGTCCTaGTGTTCCACGAAGACATCAGCACTATTCTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: TVTTAARVFGKS*CSTKTSALFCC Trigger: ACAGCAGAATAGTGCTGATGTCTTCGTGGAACACCAGGACTTCCCAAACACCCGTGCAGCTGTAGTCACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR TCA 72 bp | CTTCTCATCTCCCAGAGCGCTACACATGGCTTCTTCTaGAAACCCAGCTTCAAACAGCACAAGAAAGGGGCA | + |
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Preference number: 3 (lower is better) Translates to: LLISQSATHGFF*KPSFKQHKKGA Trigger: TGCCCCTTTCTTGTGCTGTTTGAAGCTGGGTTTTCAGAAGAAGCCATGTGTAGCGCTCTGGGAGATGAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR GCA 72 bp | TCGTACACGGCTGTTCACACATGTCCCTCCCCTACGTaGAAACTGAGTAATTGGTCAAATGGCTGTCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: SYTAVHTCPSPT*KLSNWSNGCLR Trigger: TCTCAGACAGCCATTTGACCAATTACTCAGTTTGCACGTAGGGGAGGGACATGTGTGAACAGCCGTGTACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR TCA 72 bp | AGATCTCTCTGGCCTGCCTCTTATCCTCAGGAAAAATaGCAGGCAGCTTACCTCAGCAAGGTACAAACGGAT | + |
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Preference number: 3 (lower is better) Translates to: RSLWPASYPQEK*QAAYLSKVQTD Trigger: ATCCGTTTGTACCTTGCTGAGGTAAGCTGCCTGTCATTTTTCCTGAGGATAAGAGGCAGGCCAGAGAGATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR TCA 72 bp | ATTCCAAAGAAGCCTCGTTGCCAGCGGATACAGTCCTaGTGGACGAACAACCAACCAATCTGTCTTGAGACA | + |
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Preference number: 3 (lower is better) Translates to: IPKKPRCQRIQS*WTNNQPICLET Trigger: TGTCTCAAGACAGATTGGTTGGTTGTTCGTCCATCAGGACTGTATCCGCTGGCAACGAGGCTTCTTTGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR CCA 72 bp | CTTACCAATGCTTCTCATCTCCCAGAGCGCTACACATaGCTTCTTCTGAAAACCCAGCTTCAAACAGCACAA | + |
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Preference number: 3 (lower is better) Translates to: LTNASHLPERYT*LLLKTQLQTAQ Trigger: TTGTGCTGTTTGAAGCTGGGTTTTCAGAAGAAGCCATGTGTAGCGCTCTGGGAGATGAGAAGCATTGGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR CCA 72 bp | GCCTGGCACACAGAACACAAACAGAGTTTACAGCATTaGCTGCACAAAGATACACACCCTTACCAATGCTTC | + |
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Preference number: 3 (lower is better) Translates to: AWHTEHKQSLQH*LHKDTHPYQCF Trigger: GAAGCATTGGTAAGGGTGTGTATCTTTGTGCAGCCAATGCTGTAAACTCTGTTTGTGTTCTGTGTGCCAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR GCA 72 bp | GGCACACAGAACACAAACAGAGTTTACAGCATTGGCTaGACAAAGATACACACCCTTACCAATGCTTCTCAT | + |
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Preference number: 3 (lower is better) Translates to: GTQNTNRVYSIG*TKIHTLTNASH Trigger: ATGAGAAGCATTGGTAAGGGTGTGTATCTTTGTGCAGCCAATGCTGTAAACTCTGTTTGTGTTCTGTGTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR CCA 72 bp | ATCCCTTTGCAAATGAAATCCACAGGAGCTGTCTTTTaGAACAGGGAGAAACCCACTTTTTGCACCAATCAC | + |
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Preference number: 3 (lower is better) Translates to: IPLQMKSTGAVF*NREKPTFCTNH Trigger: GTGATTGGTGCAAAAAGTGGGTTTCTCCCTGTTCCAAAAGACAGCTCCTGTGGATTTCATTTGCAAAGGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR TCA 72 bp | CCACACACAGATCTGGTCACCAGAAAACGTCACAAATaGCACATAATCCCTTTGCAAATGAAATCCACAGGA | + |
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Preference number: 3 (lower is better) Translates to: PHTDLVTRKRHK*HIIPLQMKSTG Trigger: TCCTGTGGATTTCATTTGCAAAGGGATTATGTGTCATTTGTGACGTTTTCTGGTGACCAGATCTGTGTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| 3UTR TCA 72 bp | CTGGTGTTCCACGAAGACATCAGCACTATTCTGCTGTaGCAATGTCTACATATTGGTTCGATGATTGAAATA | + |
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Preference number: 3 (lower is better) Translates to: LVFHEDISTILL*QCLHIGSMIEI Trigger: TATTTCAATCATCGAACCAATATGTAGACATTGTCACAGCAGAATAGTGCTGATGTCTTCGTGGAACACCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR CCA 90 bp | CGACAGCTGCTACTGTCCCAAGCAGTGTCCCCTGTGGCAGAGCTGGAAGCTGATGCATCACCACGGCCTTaGGGACACCGGGGCGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: RQLLLSQAVSPVAELEADASPRP*GHRGGH Trigger: GTGCCCGCCCCGGTGTCCCCAAGGCCGTGGTGATGC...ATCAGCTTCCAGCTCTGCCACAGGGGACACTGCTTGGGACAGTAGCAGCTGTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR CCA 90 bp | AAGCCCCTCTGGAGGCCGTTGCTCAGCGCCCAGACCAATCGTACACGGCTGTTCCCGTGCTCTGCCACCTaGAGCAAGGCACTCCCGGTT | + |
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Preference number: 4 (lower is better) Translates to: KPLWRPLLSAQTNRTRLFPCSAT*SKALPV Trigger: AACCGGGAGTGCCTTGCTCCAGGTGGCAGAGCACGG...GAACAGCCGTGTACGATTGGTCTGGGCGCTGAGCAACGGCCTCCAGAGGGGCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR TCA 90 bp | CGACAGCTGCTACTGTCCCAAGCAGTGTCCCCTGTGGCAGAGCTGGAAGCTGATCTGCGTGGCCTGTCCTaGCCAGTCCTGCTGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: RQLLLSQAVSPVAELEADLRGLS*PVLLAL Trigger: GAGTGCCAGCAGGACTGGTCAGGACAGGCCACGCAG...ATCAGCTTCCAGCTCTGCCACAGGGGACACTGCTTGGGACAGTAGCAGCTGTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCAGCGCCCAGACCAATCGTACACGGCTGTTCACACATGTCCCTCCCCTACACACGGCAGCCCGGGTaGGATGGGTGTCTAGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: CSAPRPIVHGCSHMSLPYTRQPG*DGCLAR Trigger: TCGGGCTAGACACCCATCCCACCCGGGCTGCCGTGT...GTAGGGGAGGGACATGTGTGAACAGCCGTGTACGATTGGTCTGGGCGCTGAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR TCA 90 bp | CTGGAGGCCGTTGCTCAGCGCCCAGACCAATCGTACACGGCTGTTCACACATGTGAAGACCAGGTCCAGTaGCTGTGCCTGGCAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEAVAQRPDQSYTAVHTCEDQVQ*LCLAAW Trigger: CCAGGCTGCCAGGCACAGTCACTGGACCTGGTCTTC...ACATGTGTGAACAGCCGTGTACGATTGGTCTGGGCGCTGAGCAACGGCCTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR GCA 90 bp | CTGGAGGCCGTTGCTCAGCGCCCAGACCAATCGTACACGGCTGTTCACACATGTAGCCCGAAGGCAGTCTaGACCCGGCTGCCATATACC | + |
|
Preference number: 4 (lower is better) Translates to: LEAVAQRPDQSYTAVHTCSPKAV*TRLPYT Trigger: GGTATATGGCAGCCGGGTGCAGACTGCCTTCGGGCT...ACATGTGTGAACAGCCGTGTACGATTGGTCTGGGCGCTGAGCAACGGCCTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR GCA 90 bp | AAGCCCCTCTGGAGGCCGTTGCTCAGCGCCCAGACCAATCGTACACGGCTGTTCCATCTCCTCTCAAGATaGGGTTCTCACAGTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KPLWRPLLSAQTNRTRLFHLLSR*GSHSGG Trigger: GCCCCCACTGTGAGAACCGCATCTTGAGAGGAGATG...GAACAGCCGTGTACGATTGGTCTGGGCGCTGAGCAACGGCCTCCAGAGGGGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCCCTCTGGAGGCCGTTGCTCAGCGCCCAGACCAATCGTACACGGCTGTTCCAGCGATCTTCCCCATaGTCTCCCGGTTCACATGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPLWRPLLSAQTNRTRLFQRSSP*SPGSHA Trigger: TGCATGTGAACCGGGAGACCATGGGGAAGATCGCTG...GAACAGCCGTGTACGATTGGTCTGGGCGCTGAGCAACGGCCTCCAGAGGGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR CCA 90 bp | CGACAGCTGCTACTGTCCCAAGCAGTGTCCCCTGTGGCAGAGCTGGAAGCTGATCCATTTTGGCAGGGCTaGGAGTCACAGGGGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RQLLLSQAVSPVAELEADPFWQG*ESQGPG Trigger: TCCAGGCCCCTGTGACTCCCAGCCCTGCCAAAATGG...ATCAGCTTCCAGCTCTGCCACAGGGGACACTGCTTGGGACAGTAGCAGCTGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCCCTCTGGAGGCCGTTGCTCAGCGCCCAGACCAATCGTACACGGCTGTTCCCACACCTTCTGGAATaGACGTGCCTCCATTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KPLWRPLLSAQTNRTRLFPHLLE*TCLHFG Trigger: GCCAAAATGGAGGCACGTGCATTCCAGAAGGTGTGG...GAACAGCCGTGTACGATTGGTCTGGGCGCTGAGCAACGGCCTCCAGAGGGGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR GCA 90 bp | CCGTTGCTCAGCGCCCAGACCAATCGTACACGGCTGTTCACACATGTCCCTCCCGCAGAACTACTACTCTaGGTGGCCTGTCCTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLLSAQTNRTRLFTHVPPAELLL*VACPDQ Trigger: CTGGTCAGGACAGGCCACGCAGAGTAGTAGTTCTGC...GGGAGGGACATGTGTGAACAGCCGTGTACGATTGGTCTGGGCGCTGAGCAACGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR CCA 90 bp | CCGTTGCTCAGCGCCCAGACCAATCGTACACGGCTGTTCACACATGTCCCTCCCCCTCCTCTGCAGCTCTaGGATTTGGCTGAACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PLLSAQTNRTRLFTHVPPPPLQL*DLAEQV Trigger: GACCTGTTCAGCCAAATCCCAGAGCTGCAGAGGAGG...GGGAGGGACATGTGTGAACAGCCGTGTACGATTGGTCTGGGCGCTGAGCAACGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR CCA 90 bp | ATGACCCTCAAGCAGGTCGTCAGATCTCTCTGGCCTGCCTCTTATCCTCAGGAATCCAGTGACTGTGCCTaGCAGCCTGGCCGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MTLKQVVRSLWPASYPQESSDCA*QPGRGW Trigger: CCAGCCACGGCCAGGCTGCCAGGCACAGTCACTGGA...TTCCTGAGGATAAGAGGCAGGCCAGAGAGATCTGACGACCTGCTTGAGGGTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR TCA 90 bp | GTGTTTGGGAAGTCCTGGTGTTCCACGAAGACATCAGCACTATTCTGCTGTGACTCCCGAGCCCTTGCGTaGGCTGCTGGCCCAGACACC | + |
|
Preference number: 4 (lower is better) Translates to: VFGKSWCSTKTSALFCCDSRALA*AAGPDT Trigger: GGTGTCTGGGCCAGCAGCTCACGCAAGGGCTCGGGA...GTCACAGCAGAATAGTGCTGATGTCTTCGTGGAACACCAGGACTTCCCAAACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR GCA 90 bp | CGACAGCTGCTACTGTCCCAAGCAGTGTCCCCTGTGGCAGAGCTGGAAGCTGATGTGTGGACCATCACATaGTTCGGGCTACCGGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: RQLLLSQAVSPVAELEADVWTIT*FGLPVI Trigger: GATCACCGGTAGCCCGAAGCATGTGATGGTCCACAC...ATCAGCTTCCAGCTCTGCCACAGGGGACACTGCTTGGGACAGTAGCAGCTGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR TCA 90 bp | GACAGCTGCTACTGTCCCAAGCAGTGTCCCCTGTGGCAGAGCTGGAAGCTGATGTTCACATGCACTTCCTaGAGAGAGATGGTCGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DSCYCPKQCPLWQSWKLMFTCTS*REMVGD Trigger: GTCCCCGACCATCTCTCTTCAGGAAGTGCATGTGAA...CATCAGCTTCCAGCTCTGCCACAGGGGACACTGCTTGGGACAGTAGCAGCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR GCA 90 bp | AGGTACTGTGACTACAGCTGCACGGGTGTTTGGGAAGTCCTGGTGTTCCACGAAGCACAGAGCCATTTCTaGCTCCGGGGAACCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RYCDYSCTGVWEVLVFHEAQSHF*LRGTLC Trigger: GCAGAGGGTTCCCCGGAGGCAGAAATGGCTCTGTGC...TTCGTGGAACACCAGGACTTCCCAAACACCCGTGCAGCTGTAGTCACAGTACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR GCA 90 bp | ATGACCCTCAAGCAGGTCGTCAGATCTCTCTGGCCTGCCTCTTATCCTCAGGAAGACAGCTGCATCTTCTaGCCCACTCCCGCCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: MTLKQVVRSLWPASYPQEDSCIF*PTPACE Trigger: CTCACAGGCGGGAGTGGGGCAGAAGATGCAGCTGTC...TTCCTGAGGATAAGAGGCAGGCCAGAGAGATCTGACGACCTGCTTGAGGGTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGCATCCTGCAGACGTGGAGTAGCACCTCAGCCAGCCAGCCTGGCACACAGATTCCAGATGAGGAGTaGAACCAAACTGCAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ESILQTWSSTSASQPGTQIPDEE*NQTARL Trigger: GAGCCTTGCAGTTTGGTTCCACTCCTCATCTGGAAT...CTGTGTGCCAGGCTGGCTGGCTGAGGTGCTACTCCACGTCTGCAGGATGCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| 3UTR CAA 72 bp | CCTCCTGGGCAACCCCTCATCCCTCCCTTGCTGAGTTaGAGAAGTCTGCCCATCATTGCCACCACTAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPGQPLIPPLLS*RSLPIIATTKR Trigger: CCTCTTAGTGGTGGCAATGATGGGCAGACTTCTCAAACTCAGCAAGGGAGGGATGAGGGGTTGCCCAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR TCA 90 bp | TTTGGGAAGTCCTGGTGTTCCACGAAGACATCAGCACTATTCTGCTGTGACAATGCTCACTGGCCAGCGTaGGCAGCTCGTCCCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FGKSWCSTKTSALFCCDNAHWPA*AARPTW Trigger: CCAGGTGGGACGAGCTGCTCACGCTGGCCAGTGAGC...ATTGTCACAGCAGAATAGTGCTGATGTCTTCGTGGAACACCAGGACTTCCCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR GCA 90 bp | AGGTACTGTGACTACAGCTGCACGGGTGTTTGGGAAGTCCTGGTGTTCCACGAAGACTTCCCCTCCGAATaGCAGTGGGCAGAGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RYCDYSCTGVWEVLVFHEDFPSE*QWAETV Trigger: CACTGTCTCTGCCCACTGGCATTCGGAGGGGAAGTC...TTCGTGGAACACCAGGACTTCCCAAACACCCGTGCAGCTGTAGTCACAGTACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGCATCCTGCAGACGTGGAGTAGCACCTCAGCCAGCCAGCCTGGCACACAGACGATGATAAGAATCTaGGGCACAGAGCCATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESILQTWSSTSASQPGTQTMIRI*GTEPFL Trigger: CAGAAATGGCTCTGTGCCCCAGATTCTTATCATCGT...CTGTGTGCCAGGCTGGCTGGCTGAGGTGCTACTCCACGTCTGCAGGATGCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| 3UTR CAA 72 bp | GAAAGCAAACCTCCTGGGCAACCCCTCATCCCTCCCTaGCTGAGTTTGAGAAGTCTGCCCATCATTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: ESKPPGQPLIPP*LSLRSLPIIAT Trigger: GGTGGCAATGATGGGCAGACTTCTCAAACTCAGCAAGGGAGGGATGAGGGGTTGCCCAGGAGGTTTGCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR TCA 90 bp | GGCTGCACAAAGATACACACCCTTACCAATGCTTCTCATCTCCCAGAGCGCTACGCTCTGGGATTTGGCTaGACAGGTCCTGAGGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCTKIHTLTNASHLPERYALGFG*TGPEGL Trigger: CAGACCCTCAGGACCTGTTCAGCCAAATCCCAGAGC...GTAGCGCTCTGGGAGATGAGAAGCATTGGTAAGGGTGTGTATCTTTGTGCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR GCA 90 bp | CGACAGCTGCTACTGTCCCAAGCAGTGTCCCCTGTGGCAGAGCTGGAAGCTGATAGCACCACATTAATTTaGTGGCCACAGCGATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RQLLLSQAVSPVAELEADSTTLI*WPQRSS Trigger: GGAAGATCGCTGTGGCCAGCAAATTAATGTGGTGCT...ATCAGCTTCCAGCTCTGCCACAGGGGACACTGCTTGGGACAGTAGCAGCTGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR CCA 90 bp | TTTGGGAAGTCCTGGTGTTCCACGAAGACATCAGCACTATTCTGCTGTGACAATGCAGCCCGGGTGGGATaGGTGTCTAGCCCGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FGKSWCSTKTSALFCCDNAARVG*VSSPKA Trigger: TGCCTTCGGGCTAGACACCCATCCCACCCGGGCTGC...ATTGTCACAGCAGAATAGTGCTGATGTCTTCGTGGAACACCAGGACTTCCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR GCA 90 bp | TGGCTTCTTCTGAAAACCCAGCTTCAAACAGCACAAGAAAGGGGCAGGGTGGGGCTTCTGGAATGCACGTaGCTCCATTTTGGCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WLLLKTQLQTAQERGRVGLLECT*LHFGRA Trigger: AGCCCTGCCAAAATGGAGGCACGTGCATTCCAGAAG...CCCCACCCTGCCCCTTTCTTGTGCTGTTTGAAGCTGGGTTTTCAGAAGAAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR GCA 90 bp | GCAAATGAAATCCACAGGAGCTGTCTTTTGGAACAGGGAGAAACCCACTTTTTGGGCAAGCCTCCGTACTaGCTCCCTGAGGACGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ANEIHRSCLLEQGETHFLGKPPY*LPEDGS Trigger: GGAGCCGTCCTCAGGGAGGCAGTACGGAGGCTTGCC...CAAAAAGTGGGTTTCTCCCTGTTCCAAAAGACAGCTCCTGTGGATTTCATTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR CCA 90 bp | CAATGCTTCTCATCTCCCAGAGCGCTACACATGGCTTCTTCTGAAAACCCAGCTCCCTCCGAATGCCAGTaGGCAGAGACAGTGGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: QCFSSPRALHMASSENPAPSECQ*AETVVP Trigger: AGGTACCACTGTCTCTGCCCACTGGCATTCGGAGGG...AGCTGGGTTTTCAGAAGAAGCCATGTGTAGCGCTCTGGGAGATGAGAAGCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR CCA 90 bp | GCAAATGAAATCCACAGGAGCTGTCTTTTGGAACAGGGAGAAACCCACTTTTTGGGGCGGGCACCCCTCTaGACCGTCATCACCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ANEIHRSCLLEQGETHFLGRAPL*TVITLS Trigger: GGACAAGGTGATGACGGTCCAGAGGGGTGCCCGCCC...CAAAAAGTGGGTTTCTCCCTGTTCCAAAAGACAGCTCCTGTGGATTTCATTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR TCA 90 bp | CGAAGACATCAGCACTATTCTGCTGTGACAATGTCTACATATTGGTTCGATGATTGCCAGCGAGCTCCCTaGCGGTCTCCAGCGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRHQHYSAVTMSTYWFDDCQRAP*RSPASS Trigger: GGAGGACGCTGGAGACCGTCAGGGAGCTCGCTGGCA...ATCATCGAACCAATATGTAGACATTGTCACAGCAGAATAGTGCTGATGTCTTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR TCA 90 bp | TTTGGGAAGTCCTGGTGTTCCACGAAGACATCAGCACTATTCTGCTGTGACAATTCGGCTTGCAGAGGTTaGCTGGCAGCCTGGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FGKSWCSTKTSALFCCDNSACRG*LAAWLL Trigger: GAGAAGCCAGGCTGCCAGTCAACCTCTGCAAGCCGA...ATTGTCACAGCAGAATAGTGCTGATGTCTTCGTGGAACACCAGGACTTCCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR GCA 90 bp | TTTGGGAAGTCCTGGTGTTCCACGAAGACATCAGCACTATTCTGCTGTGACAATAGCAGTGGTGCAGAGTaGGGAGCTGCTGAGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FGKSWCSTKTSALFCCDNSSGAE*GAAEGA Trigger: AGCACCCTCAGCAGCTCCGCACTCTGCACCACTGCT...ATTGTCACAGCAGAATAGTGCTGATGTCTTCGTGGAACACCAGGACTTCCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR GCA 90 bp | ATGACCCTCAAGCAGGTCGTCAGATCTCTCTGGCCTGCCTCTTATCCTCAGGAAAGAGGACATCGATTCTaGATTCCAGGCTCAGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: MTLKQVVRSLWPASYPQERGHRF*IPGSAS Trigger: CGAAGCTGAGCCTGGAATGCAGAATCGATGTCCTCT...TTCCTGAGGATAAGAGGCAGGCCAGAGAGATCTGACGACCTGCTTGAGGGTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR GCA 90 bp | GCAAATGAAATCCACAGGAGCTGTCTTTTGGAACAGGGAGAAACCCACTTTTTGATCAGGTCCGGCACATaGTGGTACTCCCCGACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ANEIHRSCLLEQGETHFLIRSGT*WYSPTG Trigger: GCCCGTCGGGGAGTACCAGCATGTGCCGGACCTGAT...CAAAAAGTGGGTTTCTCCCTGTTCCAAAAGACAGCTCCTGTGGATTTCATTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR GCA 90 bp | GTGTATAAATGTGAAGGAAGAAAATGTGGGTCAGAGACGGGGAGAGCATCCTGCCAGTCTGCACCCGGCTaGCATATACCACCAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VYKCEGRKCGSETGRASCQSAPG*HIPPGQ Trigger: TTGGCCTGGTGGTATATGGCAGCCGGGTGCAGACTG...GCAGGATGCTCTCCCCGTCTCTGACCCACATTTTCTTCCTTCACATTTATACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR CCA 90 bp | CTTATCCTCAGGAAAAATGACAGGCAGCTTACCTCAGCAAGGTACAAACGGATTGATCAGGGAGTCGCGTaGACCGGCAAGCCTCCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LILRKNDRQLTSARYKRIDQGVA*TGKPPY Trigger: GTACGGAGGCTTGCCGGTCCACGCGACTCCCTGATC...AATCCGTTTGTACCTTGCTGAGGTAAGCTGCCTGTCATTTTTCCTGAGGATAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR TCA 90 bp | CAATGCTTCTCATCTCCCAGAGCGCTACACATGGCTTCTTCTGAAAACCCAGCTTGGTCGGGGACACTCTaGAGAACAGGAGCATGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QCFSSPRALHMASSENPAWSGTL*RTGACR Trigger: TCTACATGCTCCTGTTCTTCAGAGTGTCCCCGACCA...AGCTGGGTTTTCAGAAGAAGCCATGTGTAGCGCTCTGGGAGATGAGAAGCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR CCA 90 bp | TGGCTTCTTCTGAAAACCCAGCTTCAAACAGCACAAGAAAGGGGCAGGGTGGGGACAGGAGCATGTAGATaGCTGGTAGAAGCAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: WLLLKTQLQTAQERGRVGTGACR*LVEAEV Trigger: CACTTCTGCTTCTACCAGCCATCTACATGCTCCTGT...CCCCACCCTGCCCCTTTCTTGTGCTGTTTGAAGCTGGGTTTTCAGAAGAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR CCA 90 bp | AGGTACTGTGACTACAGCTGCACGGGTGTTTGGGAAGTCCTGGTGTTCCACGAAACCACATTAATTTGCTaGCCACAGCGATCTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RYCDYSCTGVWEVLVFHETTLIC*PQRSSP Trigger: TGGGGAAGATCGCTGTGGCCAGCAAATTAATGTGGT...TTCGTGGAACACCAGGACTTCCCAAACACCCGTGCAGCTGTAGTCACAGTACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGGAAGTCCTGGTGTTCCACGAAGACATCAGCACTATTCTGCTGTGACAATCACGTGCCTCCATTTTaGCAGGGCTGGGAGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FGKSWCSTKTSALFCCDNHVPPF*QGWESQ Trigger: CTGTGACTCCCAGCCCTGCCAAAATGGAGGCACGTG...ATTGTCACAGCAGAATAGTGCTGATGTCTTCGTGGAACACCAGGACTTCCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR CCA 90 bp | GTGTTTGGGAAGTCCTGGTGTTCCACGAAGACATCAGCACTATTCTGCTGTGACGCCTTCATTCATGCATaGGCTCGGCTTGCAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VFGKSWCSTKTSALFCCDAFIHA*ARLAEV Trigger: AACCTCTGCAAGCCGAGCCCATGCATGAATGAAGGC...GTCACAGCAGAATAGTGCTGATGTCTTCGTGGAACACCAGGACTTCCCAAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR TCA 90 bp | GTGTTTGGGAAGTCCTGGTGTTCCACGAAGACATCAGCACTATTCTGCTGTGACAAGGGGAATTCCAGATaGGGAGTGGAACCAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VFGKSWCSTKTSALFCCDKGNSR*GVEPNC Trigger: GCAGTTTGGTTCCACTCCTCATCTGGAATTCCCCTT...GTCACAGCAGAATAGTGCTGATGTCTTCGTGGAACACCAGGACTTCCCAAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR GCA 90 bp | AGGTACTGTGACTACAGCTGCACGGGTGTTTGGGAAGTCCTGGTGTTCCACGAACCACCATTAGATTCCTaGCATAACTGGCTATCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RYCDYSCTGVWEVLVFHEPPLDS*HNWLSQ Trigger: TTGGGATAGCCAGTTATGGCAGGAATCTAATGGTGG...TTCGTGGAACACCAGGACTTCCCAAACACCCGTGCAGCTGTAGTCACAGTACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR TCA 90 bp | CGAAGACATCAGCACTATTCTGCTGTGACAATGTCTACATATTGGTTCGATGATCTCCGCTCACAGGGATaGGGTTCCACCCTGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRHQHYSAVTMSTYWFDDLRSQG*GSTLQS Trigger: AGACTGCAGGGTGGAACCTCATCCCTGTGAGCGGAG...ATCATCGAACCAATATGTAGACATTGTCACAGCAGAATAGTGCTGATGTCTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR GCA 90 bp | CTTATCCTCAGGAAAAATGACAGGCAGCTTACCTCAGCAAGGTACAAACGGATTCTGCATAGCCTCCTCTaGAGCTCTGGGATTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LILRKNDRQLTSARYKRILHSLL*SSGIWL Trigger: CAGCCAAATCCCAGAGCTGCAGAGGAGGCTATGCAG...AATCCGTTTGTACCTTGCTGAGGTAAGCTGCCTGTCATTTTTCCTGAGGATAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR CCA 90 bp | CTTATCCTCAGGAAAAATGACAGGCAGCTTACCTCAGCAAGGTACAAACGGATTTTCCACCCTGCAGTCTaGATCAGCAGTGGTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LILRKNDRQLTSARYKRIFHPAV*ISSGAE Trigger: CTCTGCACCACTGCTGATCCAGACTGCAGGGTGGAA...AATCCGTTTGTACCTTGCTGAGGTAAGCTGCCTGTCATTTTTCCTGAGGATAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGTCACCAGAAAACGTCACAAATGACACATAATCCCTTTGCAAATGAAATCCCTGCACAAAGCGCTTaGCAAAGGCCTTGGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGHQKTSQMTHNPFANEIPAQSA*QRPWPS Trigger: GGAGGGCCAAGGCCTTTGTCAAGCGCTTTGTGCAGG...GATTTCATTTGCAAAGGGATTATGTGTCATTTGTGACGTTTTCTGGTGACCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR CCA 90 bp | CTTATCCTCAGGAAAAATGACAGGCAGCTTACCTCAGCAAGGTACAAACGGATTCTTGCAGAGGTTGACTaGCAGCCTGGCTTCTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: LILRKNDRQLTSARYKRILAEVD*QPGFST Trigger: TGTAGAGAAGCCAGGCTGCCAGTCAACCTCTGCAAG...AATCCGTTTGTACCTTGCTGAGGTAAGCTGCCTGTCATTTTTCCTGAGGATAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR TCA 90 bp | CACAGATCTGGTCACCAGAAAACGTCACAAATGACACATAATCCCTTTGCAAATAGTGTCTGCTTGCCTTaGTCCTCTCCAGCACAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HRSGHQKTSQMTHNPFANSVCLP*SSPAQG Trigger: GCCTTGTGCTGGAGAGGATCAAGGCAAGCAGACACT...ATTTGCAAAGGGATTATGTGTCATTTGTGACGTTTTCTGGTGACCAGATCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR GCA 90 bp | CTTATCCTCAGGAAAAATGACAGGCAGCTTACCTCAGCAAGGTACAAACGGATTACCTTGTCCTCAATGTaGAGCAAGGCTGTACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LILRKNDRQLTSARYKRITLSSM*SKAVPA Trigger: TGCTGGTACAGCCTTGCTGCACATTGAGGACAAGGT...AATCCGTTTGTACCTTGCTGAGGTAAGCTGCCTGTCATTTTTCCTGAGGATAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR CCA 90 bp | GCAAATGAAATCCACAGGAGCTGTCTTTTGGAACAGGGAGAAACCCACTTTTTGTGGTTCTGTAGCAGTTaGCAGGGTGTGTCTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: ANEIHRSCLLEQGETHFLWFCSS*QGVSGT Trigger: TGTTCCAGACACACCCTGCCAACTGCTACAGAACCA...CAAAAAGTGGGTTTCTCCCTGTTCCAAAAGACAGCTCCTGTGGATTTCATTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR CCA 90 bp | CACAGATCTGGTCACCAGAAAACGTCACAAATGACACATAATCCCTTTGCAAATAGGGGCCTGGACAGATaGTTCTGTAGCAGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HRSGHQKTSQMTHNPFANRGLDR*FCSSWQ Trigger: CTGCCAACTGCTACAGAACCATCTGTCCAGGCCCCT...ATTTGCAAAGGGATTATGTGTCATTTGTGACGTTTTCTGGTGACCAGATCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| 3UTR CAA 72 bp | AGCCTGGCACACAGAACACAAACAGAGTTTACAGCATaGGCTGCACAAAGATACACACCCTTACCAATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLAHRTQTEFTA*AAQRYTPLPML Trigger: AAGCATTGGTAAGGGTGTGTATCTTTGTGCAGCCAATGCTGTAAACTCTGTTTGTGTTCTGTGTGCCAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGTCACCAGAAAACGTCACAAATGACACATAATCCCTTTGCAAATGAAATCCACTTCCTGTCGAGTTaGGAAGGAGTCCAAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGHQKTSQMTHNPFANEIHFLSS*EGVQGE Trigger: TTCCCCTTGGACTCCTTCTCAACTCGACAGGAAGTG...GATTTCATTTGCAAAGGGATTATGTGTCATTTGTGACGTTTTCTGGTGACCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGTCACCAGAAAACGTCACAAATGACACATAATCCCTTTGCAAATGAAATCCTCATCCTGGGAGCGTaGTTCAGTGAGCAGAACTAC | + |
|
Preference number: 4 (lower is better) Translates to: SGHQKTSQMTHNPFANEILILGA*FSEQNY Trigger: GTAGTTCTGCTCACTGAATCACGCTCCCAGGATGAG...GATTTCATTTGCAAAGGGATTATGTGTCATTTGTGACGTTTTCTGGTGACCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR GCA 90 bp | TCTGGTCACCAGAAAACGTCACAAATGACACATAATCCCTTTGCAAATGAAATCAGACTGAGATGCCATTaGCTCTCAGCTTCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGHQKTSQMTHNPFANEIRLRCH*LSASGQ Trigger: CTGCCCAGAAGCTGAGAGGCAATGGCATCTCAGTCT...GATTTCATTTGCAAAGGGATTATGTGTCATTTGTGACGTTTTCTGGTGACCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| 3UTR CAA 72 bp | AATCCCTTTGCAAATGAAATCCACAGGAGCTGTCTTTaGGAACAGGGAGAAACCCACTTTTTGCACCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: NPFANEIHRSCL*EQGETHFLHQS Trigger: TGATTGGTGCAAAAAGTGGGTTTCTCCCTGTTCCAAAAGACAGCTCCTGTGGATTTCATTTGCAAAGGGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS CCA 90 bp | CTAGGTAGGGAGCCTGGCTCATGGCCCGCAACACGGCAGCCCGGGTaGGATGGGTGTCTAGCCCGAAGGCAGTCTGCACCCGGCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LGREPGSWPATRQPG*DGCLARRQSAPGCH Trigger: ATGGCAGCCGGGTGCAGACTGCCTTCGGGCTAGACACCCATCCCACCCGGGCTGCCGTGTTGCGGGCCATGAGCCAGGCTCCCTACCTAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS CCA 90 bp | CTGTACCAGCAGAACCCACACCCCCTAGGTAGGGAGCCTGGCTCATaGCCCGCAACACGGCAGCCCGGGTGGGATGGGTGTCTAGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LYQQNPHPLGREPGS*PATRQPGWDGCLAR Trigger: TCGGGCTAGACACCCATCCCACCCGGGCTGCCGTGTTGCGGGCCATGAGCCAGGCTCCCTACCTAGGGGGTGTGGGTTCTGCTGGTACAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS TCA 90 bp | CCAGCGAGCTCCCTGACGGTCTCCAGCGTCCTCCGCTCACAGGGATaGGGTTCCACCCTGCAGTCTGGATCAGCAGTGGTGCAGAGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PASSLTVSSVLRSQG*GSTLQSGSAVVQSA Trigger: CGCACTCTGCACCACTGCTGATCCAGACTGCAGGGTGGAACCTCATCCCTGTGAGCGGAGGACGCTGGAGACCGTCAGGGAGCTCGCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS CCA 90 bp | GGTACTCCCCGACGGGCACCGCCACCATTAGATTCCTGCCATAACTaGCTATCCCAACGCGGGCTCGGGAGTCCTCCCTCAGCACGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GTPRRAPPPLDSCHN*LSQRGLGSPPSARP Trigger: AGGCCGTGCTGAGGGAGGACTCCCGAGCCCGCGTTGGGATAGCCAGTTATGGCAGGAATCTAATGGTGGCGGTGCCCGTCGGGGAGTACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS GCA 90 bp | AGGAGGCCATTGGTGGCATCCTCCACTTGCTCAGCCAACAGCACATaGCGGTCCTTCGGCTCACTGGCCAGCGTGAGCAGCTCGTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RRPLVASSTCSANST*RSFGSLASVSSSSH Trigger: GTGGGACGAGCTGCTCACGCTGGCCAGTGAGCCGAAGGACCGGCATGTGCTGTTGGCTGAGCAAGTGGAGGATGCCACCAATGGCCTCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS GCA 90 bp | ACCATCACATGCTTCGGGCTACCGGTGATCTTCACCAGCTCCGCCTaGAGGATCTCACTGCCCACGCCCAGGAGGAGTAGCTCCCGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TITCFGLPVIFTSSA*RISLPTPRRSSSRA Trigger: GGCTCGGGAGCTACTCCTCCTGGGCGTGGGCAGTGAGATCCTGCAGGCGGAGCTGGTGAAGATCACCGGTAGCCCGAAGCATGTGATGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS GCA 90 bp | GATGCCATTGCCTCTCAGCTTCTGGGCAGGGACAGCTGCATCTTCTaGCCCACTCCCGCCTGTGAGCATCACCACGGCCTTGGGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: DAIASQLLGRDSCIF*PTPACEHHHGLGDT Trigger: GGTGTCCCCAAGGCCGTGGTGATGCTCACAGGCGGGAGTGGGGCAGAAGATGCAGCTGTCCCTGCCCAGAAGCTGAGAGGCAATGGCATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS CCA 90 bp | GTACGGAAGGTCTGTGTAAGCTGCCACATGGATCAGGGAGTCGCGTaGACCGGCAAGCCTCCGTACTGCCTCCCTGAGGACGGCTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VRKVCVSCHMDQGVA*TGKPPYCLPEDGSH Trigger: GTGGGAGCCGTCCTCAGGGAGGCAGTACGGAGGCTTGCCGGTCCACGCGACTCCCTGATCCATGTGGCAGCTTACACAGACCTTCCGTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS TCA 90 bp | GCTCAGCCAACAGCACATGCCGGTCCTTCGGCTCACTGGCCAGCGTaGGCAGCTCGTCCCACCTGGGAAAACGGACTCCTACGGCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: AQPTAHAGPSAHWPA*AARPTWENGLLRQT Trigger: TGTTTGCCGTAGGAGTCCGTTTTCCCAGGTGGGACGAGCTGCTCACGCTGGCCAGTGAGCCGAAGGACCGGCATGTGCTGTTGGCTGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS TCA 90 bp | GGTCCTGAGGGTCTGTGTGGACCATCACATGCTTCGGGCTACCGGTaGTCTTCACCAGCTCCGCCTGCAGGATCTCACTGCCCACGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GPEGLCGPSHASGYR*SSPAPPAGSHCPRP Trigger: TGGGCGTGGGCAGTGAGATCCTGCAGGCGGAGCTGGTGAAGATCACCGGTAGCCCGAAGCATGTGATGGTCCACACAGACCCTCAGGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS GCA 90 bp | AAACGGACTCCTACGGCAAACACGACGATGCCCCTTTCTCTCAGCTaGTTAGCCGGGAGAGCCACGGGCCCCTGGGACTTGCCATCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: KRTPTANTTMPLSLS*LAGRATGPWDLPSV Trigger: CACGGATGGCAAGTCCCAGGGGCCCGTGGCTCTCCCGGCTAAGCAGCTGAGAGAAAGGGGCATCGTCGTGTTTGCCGTAGGAGTCCGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS GCA 90 bp | GGGATGAGGTTCCACCCTGCAGTCTGGATCAGCAGTGGTGCAGAGTaGGGAGCTGCTGAGGGTGCTGAGGAGGCCATTGGTGGCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GMRFHPAVWISSGAE*GAAEGAEEAIGGIL Trigger: GAGGATGCCACCAATGGCCTCCTCAGCACCCTCAGCAGCTCCGCACTCTGCACCACTGCTGATCCAGACTGCAGGGTGGAACCTCATCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS GCA 90 bp | GCACATGCTGGTACTCCCCGACGGGCACCGCCACCATTAGATTCCTaGCATAACTGGCTATCCCAACGCGGGCTCGGGAGTCCTCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AHAGTPRRAPPPLDS*HNWLSQRGLGSPPS Trigger: TGAGGGAGGACTCCCGAGCCCGCGTTGGGATAGCCAGTTATGGCAGGAATCTAATGGTGGCGGTGCCCGTCGGGGAGTACCAGCATGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS GCA 90 bp | AACACGGCAGCCCGGGTGGGATGGGTGTCTAGCCCGAAGGCAGTCTaGACCCGGCTGCCATATACCACCAGGCCAACCTGTGTCACATCA | + |
|
Preference number: 5 (lower is better) Translates to: NTAARVGWVSSPKAV*TRLPYTTRPTCVTS Trigger: TGATGTGACACAGGTTGGCCTGGTGGTATATGGCAGCCGGGTGCAGACTGCCTTCGGGCTAGACACCCATCCCACCCGGGCTGCCGTGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS GCA 90 bp | CACAGTGGGGGCCTTCCCAGCCACCCCGGCACTCGCATCGGTAACTaGCGTTCTTCAGGACACAGGTGCCTTCATTCATGCATGGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HSGGLPSHPGTRIGN*RSSGHRCLHSCMGS Trigger: CGAGCCCATGCATGAATGAAGGCACCTGTGTCCTGAAGAACGGCAGTTACCGATGCGAGTGCCGGGGTGGCTGGGAAGGCCCCCACTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CCA 90 bp | GCCACGGGCCCCTGGGACTTGCCATCCGTGACGATGATAAGAATCTaGGGCACAGAGCCATTTCTGCCTCCGGGGAACCCTCTGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ATGPWDLPSVTMIRI*GTEPFLPPGNPLLR Trigger: CCTGAGCAGAGGGTTCCCCGGAGGCAGAAATGGCTCTGTGCCCCAGATTCTTATCATCGTCACGGATGGCAAGTCCCAGGGGCCCGTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR CAA 90 bp | AAGCCCCTCTGGAGGCCGTTGCTCAGCGCCCAGACCAATCGTACACGGCTGTTCAGCTTCGGGGCACAGTaGACTTCCCCTCCGAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: KPLWRPLLSAQTNRTRLFSFGAQ*TSPPNA Trigger: GGCATTCGGAGGGGAAGTCAACTGTGCCCCGAAGCT...GAACAGCCGTGTACGATTGGTCTGGGCGCTGAGCAACGGCCTCCAGAGGGGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS GCA 90 bp | CCGCTGAAGGGAATGCTGTCAAGGCTCCTGATCAGGTCCGGCACATaGTGGTACTCCCCGACGGGCACCGCCACCATTAGATTCCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLKGMLSRLLIRSGT*WYSPTGTATIRFLP Trigger: TGGCAGGAATCTAATGGTGGCGGTGCCCGTCGGGGAGTACCAGCATGTGCCGGACCTGATCAGGAGCCTTGACAGCATTCCCTTCAGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS TCA 90 bp | AGCCCTTGCGTGAGCTGCTGGCCCAGACACCTCATCCTGGGAGCGTaGTTCAGTGAGCAGAACTACTACTCTGCGTGGCCTGTCCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: SPCVSCWPRHLILGA*FSEQNYYSAWPVLT Trigger: GGTCAGGACAGGCCACGCAGAGTAGTAGTTCTGCTCACTGAATCACGCTCCCAGGATGAGGTGTCTGGGCCAGCAGCTCACGCAAGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS TCA 90 bp | CCGTACTGCCTCCCTGAGGACGGCTCCCACGCTCATAACCAAGACTaGGATGCCATTGCCTCTCAGCTTCTGGGCAGGGACAGCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: PYCLPEDGSHAHNQD*DAIASQLLGRDSCI Trigger: GATGCAGCTGTCCCTGCCCAGAAGCTGAGAGGCAATGGCATCTCAGTCTTGGTTATGAGCGTGGGAGCCGTCCTCAGGGAGGCAGTACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS GCA 90 bp | CAGCGATGGCGAAGCGCTTGGACCTCTCGAAGCTCCCCTTCCCGATaGTGTGAGAGCCATCTAACAGAAACAGGATGTCGACCGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QRWRSAWTSRSSPSR*CESHLTETGCRPRL Trigger: CAGCCGCGGTCGACATCCTGTTTCTGTTAGATGGCTCTCACAGCATCGGGAAGGGGAGCTTCGAGAGGTCCAAGCGCTTCGCCATCGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS GCA 90 bp | CCCGGGTGGGATGGGTGTCTAGCCCGAAGGCAGTCTGCACCCGGCTaGCATATACCACCAGGCCAACCTGTGTCACATCAGGATTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: PGWDGCLARRQSAPG*HIPPGQPVSHQDSH Trigger: ATGTGAATCCTGATGTGACACAGGTTGGCCTGGTGGTATATGGCAGCCGGGTGCAGACTGCCTTCGGGCTAGACACCCATCCCACCCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS CCA 90 bp | CCCACGCTCATAACCAAGACTGAGATGCCATTGCCTCTCAGCTTCTaGGCAGGGACAGCTGCATCTTCTGCCCCACTCCCGCCTGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PTLITKTEMPLPLSF*AGTAASSAPLPPVS Trigger: GCTCACAGGCGGGAGTGGGGCAGAAGATGCAGCTGTCCCTGCCCAGAAGCTGAGAGGCAATGGCATCTCAGTCTTGGTTATGAGCGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR CAA 90 bp | CTGGAGGCCGTTGCTCAGCGCCCAGACCAATCGTACACGGCTGTTCACACATGTACGGGCCCCTGGGACTaGCCATCCGTGACGATGATA | + |
|
Preference number: 5 (lower is better) Translates to: LEAVAQRPDQSYTAVHTCTGPWD*PSVTMI Trigger: TATCATCGTCACGGATGGCAAGTCCCAGGGGCCCGT...ACATGTGTGAACAGCCGTGTACGATTGGTCTGGGCGCTGAGCAACGGCCTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS GCA 90 bp | GTGGGCAGAGACAGTGGTACCTATCCACACCTTCTGGAATGCACGTaGCTCCATTTTGGCAGGGCTGGGAGTCACAGGGGCCTGGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: VGRDSGTYPHLLECT*LHFGRAGSHRGLDR Trigger: TCTGTCCAGGCCCCTGTGACTCCCAGCCCTGCCAAAATGGAGGCACGTGCATTCCAGAAGGTGTGGATAGGTACCACTGTCTCTGCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS GCA 90 bp | CCACTCGATGAGCATGTCCTGATGGTACGGAAGGTCTGTGTAAGCTaGCACATGGATCAGGGAGTCGCGTGGACCGGCAAGCCTCCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PLDEHVLMVRKVCVS*HMDQGVAWTGKPPY Trigger: GTACGGAGGCTTGCCGGTCCACGCGACTCCCTGATCCATGTGGCAGCTTACACAGACCTTCCGTACCATCAGGACATGCTCATCGAGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS CCA 90 bp | AGGGCTGGGAGTCACAGGGGCCTGGACAGATGGTTCTGTAGCAGTTaGCAGGGTGTGTCTGGAACACTCTCTTCCAGCTGTAGAAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RAGSHRGLDRWFCSS*QGVSGTLSSSCRRD Trigger: GTCCCTTCTACAGCTGGAAGAGAGTGTTCCAGACACACCCTGCCAACTGCTACAGAACCATCTGTCCAGGCCCCTGTGACTCCCAGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS GCA 90 bp | GCATTCCAGGCTCAGCTTCGGGGCACAGTTGACTTCCCCTCCGAATaGCAGTGGGCAGAGACAGTGGTACCTATCCACACCTTCTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: AFQAQLRGTVDFPSE*QWAETVVPIHTFWN Trigger: ATTCCAGAAGGTGTGGATAGGTACCACTGTCTCTGCCCACTGGCATTCGGAGGGGAAGTCAACTGTGCCCCGAAGCTGAGCCTGGAATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS TCA 90 bp | AGAGGACATCGATTCTGCATTCCAGGCTCAGCTTCGGGGCACAGTTaGCTTCCCCTCCGAATGCCAGTGGGCAGAGACAGTGGTACCTAT | + |
|
Preference number: 5 (lower is better) Translates to: RGHRFCIPGSASGHS*LPLRMPVGRDSGTY Trigger: ATAGGTACCACTGTCTCTGCCCACTGGCATTCGGAGGGGAAGTCAACTGTGCCCCGAAGCTGAGCCTGGAATGCAGAATCGATGTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS CCA 90 bp | TCGGTAACTGCCGTTCTTCAGGACACAGGTGCCTTCATTCATGCATaGGCTCGGCTTGCAGAGGTTGACTGGCAGCCTGGCTTCTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: SVTAVLQDTGAFIHA*ARLAEVDWQPGFST Trigger: TGTAGAGAAGCCAGGCTGCCAGTCAACCTCTGCAAGCCGAGCCCATGCATGAATGAAGGCACCTGTGTCCTGAAGAACGGCAGTTACCGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS GCA 90 bp | CTAACAGAAACAGGATGTCGACCGCGGCTGAGCACCACATTAATTTaGTGGCCACAGCGATCTTCCCCATGGTCTCCCGGTTCACATGCA | + |
|
Preference number: 5 (lower is better) Translates to: LTETGCRPRLSTTLI*WPQRSSPWSPGSHA Trigger: TGCATGTGAACCGGGAGACCATGGGGAAGATCGCTGTGGCCAGCAAATTAATGTGGTGCTCAGCCGCGGTCGACATCCTGTTTCTGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS CCA 90 bp | ACAGAAACAGGATGTCGACCGCGGCTGAGCACCACATTAATTTGCTaGCCACAGCGATCTTCCCCATGGTCTCCCGGTTCACATGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: TETGCRPRLSTTLIC*PQRSSPWSPGSHAL Trigger: AAGTGCATGTGAACCGGGAGACCATGGGGAAGATCGCTGTGGCCAGCAAATTAATGTGGTGCTCAGCCGCGGTCGACATCCTGTTTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS TCA 90 bp | TTCACTTCCTGTCGAGTTGAGAAGGAGTCCAAGGGGAATTCCAGATaGGGAGTGGAACCAAACTGCAAGGCTCCGACTCTGACCCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FTSCRVEKESKGNSR*GVEPNCKAPTLTLP Trigger: TGGCAGGGTCAGAGTCGGAGCCTTGCAGTTTGGTTCCACTCCTCATCTGGAATTCCCCTTGGACTCCTTCTCAACTCGACAGGAAGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS-3UTR CAA 90 bp | AGGTACTGTGACTACAGCTGCACGGGTGTTTGGGAAGTCCTGGTGTTCCACGAATCACTTCCTGTCGAGTaGAGAAGGAGTCCAAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RYCDYSCTGVWEVLVFHESLPVE*RRSPRG Trigger: TCCCCTTGGACTCCTTCTCAACTCGACAGGAAGTGA...TTCGTGGAACACCAGGACTTCCCAAACACCCGTGCAGCTGTAGTCACAGTACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS GCA 90 bp | TCAGGATTCACATCAAACCGGAGGGTGCATTTCCTGATGAAGCTCTaGATTTGGGCAAAGTTCTCACGTCCCACAGAGGCAGAGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SGFTSNRRVHFLMKL*IWAKFSRPTEAEAS Trigger: GGATGCCTCTGCCTCTGTGGGACGTGAGAACTTTGCCCAAATGCAGAGCTTCATCAGGAAATGCACCCTCCGGTTTGATGTGAATCCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR CAA 90 bp | TTTGGGAAGTCCTGGTGTTCCACGAAGACATCAGCACTATTCTGCTGTGACAATCTCGGCTTGCAGAGGTaGACTGGCAGCCTGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FGKSWCSTKTSALFCCDNLGLQR*TGSLAS Trigger: AGAAGCCAGGCTGCCAGTCAACCTCTGCAAGCCGAG...ATTGTCACAGCAGAATAGTGCTGATGTCTTCGTGGAACACCAGGACTTCCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR CAA 90 bp | GGCTGCACAAAGATACACACCCTTACCAATGCTTCTCATCTCCCAGAGCGCTACTTGAAAACTATCCCCTaGATGCTTTCCTTCACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GCTKIHTLTNASHLPERYLKTIP*MLSFTS Trigger: GGAAGTGAAGGAAAGCATCAAGGGGATAGTTTTCAA...GTAGCGCTCTGGGAGATGAGAAGCATTGGTAAGGGTGTGTATCTTTGTGCAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR CAA 90 bp | CACAGATCTGGTCACCAGAAAACGTCACAAATGACACATAATCCCTTTGCAAATGGTGGCATCCTCCACTaGCTCAGCCAACAGCACATG | + |
|
Preference number: 5 (lower is better) Translates to: HRSGHQKTSQMTHNPFANGGILH*LSQQHM Trigger: CATGTGCTGTTGGCTGAGCAAGTGGAGGATGCCACC...ATTTGCAAAGGGATTATGTGTCATTTGTGACGTTTTCTGGTGACCAGATCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR CAA 90 bp | TCTGGTCACCAGAAAACGTCACAAATGACACATAATCCCTTTGCAAATGAAATCGTGCTGAGGAGGCCATaGGTGGCATCCTCCACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SGHQKTSQMTHNPFANEIVLRRP*VASSTC Trigger: GCAAGTGGAGGATGCCACCAATGGCCTCCTCAGCAC...GATTTCATTTGCAAAGGGATTATGTGTCATTTGTGACGTTTTCTGGTGACCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR CAA 90 bp | GCAAATGAAATCCACAGGAGCTGTCTTTTGGAACAGGGAGAAACCCACTTTTTGTGGACCGTCATCACCTaGTCCTCAATGTGCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ANEIHRSCLLEQGETHFLWTVIT*SSMCSK Trigger: CTTGCTGCACATTGAGGACAAGGTGATGACGGTCCA...CAAAAAGTGGGTTTCTCCCTGTTCCAAAAGACAGCTCCTGTGGATTTCATTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS-3UTR CAA 90 bp | CTTATCCTCAGGAAAAATGACAGGCAGCTTACCTCAGCAAGGTACAAACGGATTAAGACTGAGATGCCATaGCCTCTCAGCTTCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LILRKNDRQLTSARYKRIKTEMP*PLSFWA Trigger: TGCCCAGAAGCTGAGAGGCAATGGCATCTCAGTCTT...AATCCGTTTGTACCTTGCTGAGGTAAGCTGCCTGTCATTTTTCCTGAGGATAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CCA 72 bp | TGGCTCATGGCCCGCAACACGGCAGCCCGGGTGGGATaGGTGTCTAGCCCGAAGGCAGTCTGCACCCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: WLMARNTAARVG*VSSPKAVCTRL Trigger: CAGCCGGGTGCAGACTGCCTTCGGGCTAGACACCCATCCCACCCGGGCTGCCGTGTTGCGGGCCATGAGCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS CCA 72 bp | GAGCCTGGCTCATGGCCCGCAACACGGCAGCCCGGGTaGGATGGGTGTCTAGCCCGAAGGCAGTCTGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: EPGSWPATRQPG*DGCLARRQSAP Trigger: GGGTGCAGACTGCCTTCGGGCTAGACACCCATCCCACCCGGGCTGCCGTGTTGCGGGCCATGAGCCAGGCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS GCA 72 bp | CCAACGCGGGCTCGGGAGTCCTCCCTCAGCACGGCCTaGACAAAGCGCTTGACAAAGGCCTTGGCCCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PTRARESSLSTA*TKRLTKALALR Trigger: CCGGAGGGCCAAGGCCTTTGTCAAGCGCTTTGTGCAGGCCGTGCTGAGGGAGGACTCCCGAGCCCGCGTTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CCA 72 bp | GTCCTGCTGGCACTCCCAAAGCCGTGCTCTGCCACCTaGAGCAAGGCACTCCCGGTTAGGGTCGGGCCACCG | + |
|
Preference number: 6 (lower is better) Translates to: VLLALPKPCSAT*SKALPVRVGPP Trigger: CGGTGGCCCGACCCTAACCGGGAGTGCCTTGCTCCAGGTGGCAGAGCACGGCTTTGGGAGTGCCAGCAGGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS CCA 72 bp | CAGAACCCACACCCCCTAGGTAGGGAGCCTGGCTCATaGCCCGCAACACGGCAGCCCGGGTGGGATGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: QNPHPLGREPGS*PATRQPGWDGC Trigger: ACACCCATCCCACCCGGGCTGCCGTGTTGCGGGCCATGAGCCAGGCTCCCTACCTAGGGGGTGTGGGTTCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS GCA 72 bp | GCCCGGGTGGGATGGGTGTCTAGCCCGAAGGCAGTCTaGACCCGGCTGCCATATACCACCAGGCCAACCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ARVGWVSSPKAV*TRLPYTTRPTC Trigger: ACAGGTTGGCCTGGTGGTATATGGCAGCCGGGTGCAGACTGCCTTCGGGCTAGACACCCATCCCACCCGGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS GCA 72 bp | CCAGCGTCCTCCGCTCACAGGGATGAGGTTCCACCCTaGAGTCTGGATCAGCAGTGGTGCAGAGTGCGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PASSAHRDEVPP*SLDQQWCRVRS Trigger: GCTCCGCACTCTGCACCACTGCTGATCCAGACTGCAGGGTGGAACCTCATCCCTGTGAGCGGAGGACGCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS GCA 72 bp | GCCTCTCAGCTTCTGGGCAGGGACAGCTGCATCTTCTaGCCCACTCCCGCCTGTGAGCATCACCACGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: ASQLLGRDSCIF*PTPACEHHHGL Trigger: AAGGCCGTGGTGATGCTCACAGGCGGGAGTGGGGCAGAAGATGCAGCTGTCCCTGCCCAGAAGCTGAGAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS GCA 72 bp | GATCAGGGAGTCGCGTGGACCGGCAAGCCTCCGTACTaGCTCCCTGAGGACGGCTCCCACGCTCATAACCAA | + |
|
Preference number: 6 (lower is better) Translates to: DQGVAWTGKPPY*LPEDGSHAHNQ Trigger: TTGGTTATGAGCGTGGGAGCCGTCCTCAGGGAGGCAGTACGGAGGCTTGCCGGTCCACGCGACTCCCTGATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS CCA 72 bp | AGGTCCAGTGACTGTGCCTGGCAGCCTGGCCGTGGCTaGCTGCATAGCCTCCTCTGCAGCTCTGGGATTTGG | + |
|
Preference number: 6 (lower is better) Translates to: RSSDCAWQPGRG*LHSLLCSSGIW Trigger: CCAAATCCCAGAGCTGCAGAGGAGGCTATGCAGCCAGCCACGGCCAGGCTGCCAGGCACAGTCACTGGACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CCA 72 bp | GCATCCAACAGGAAGACCAGGTCCAGTGACTGTGCCTaGCAGCCTGGCCGTGGCTGGCTGCATAGCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ASNRKTRSSDCA*QPGRGWLHSLL Trigger: GAGGAGGCTATGCAGCCAGCCACGGCCAGGCTGCCAGGCACAGTCACTGGACCTGGTCTTCCTGTTGGATGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CAA 90 bp | GGAGCTGCTGAGGGTGCTGAGGAGGCCATTGGTGGCATCCTCCACTaGCTCAGCCAACAGCACATGCCGGTCCTTCGGCTCACTGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GAAEGAEEAIGGILH*LSQQHMPVLRLTGQ Trigger: CTGGCCAGTGAGCCGAAGGACCGGCATGTGCTGTTGGCTGAGCAAGTGGAGGATGCCACCAATGGCCTCCTCAGCACCCTCAGCAGCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CAA 90 bp | GCCAGCACAGTGTCTGCTTGCCTTGATCCTCTCCAGCACAAGGCATaGCCAGCGAGCTCCCTGACGGTCTCCAGCGTCCTCCGCTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: ASTVSACLDPLQHKA*PASSLTVSSVLRSQ Trigger: CTGTGAGCGGAGGACGCTGGAGACCGTCAGGGAGCTCGCTGGCAATGCCTTGTGCTGGAGAGGATCAAGGCAAGCAGACACTGTGCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS GCA 72 bp | TTGGTGGCATCCTCCACTTGCTCAGCCAACAGCACATaGCGGTCCTTCGGCTCACTGGCCAGCGTGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LVASSTCSANST*RSFGSLASVSS Trigger: GCTGCTCACGCTGGCCAGTGAGCCGAAGGACCGGCATGTGCTGTTGGCTGAGCAAGTGGAGGATGCCACCAA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS GCA 72 bp | GGTACTCCCCGACGGGCACCGCCACCATTAGATTCCTaGCATAACTGGCTATCCCAACGCGGGCTCGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GTPRRAPPPLDS*HNWLSQRGLGS Trigger: ACTCCCGAGCCCGCGTTGGGATAGCCAGTTATGGCAGGAATCTAATGGTGGCGGTGCCCGTCGGGGAGTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CCA 72 bp | CGACGGGCACCGCCACCATTAGATTCCTGCCATAACTaGCTATCCCAACGCGGGCTCGGGAGTCCTCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RRAPPPLDSCHN*LSQRGLGSPPS Trigger: TGAGGGAGGACTCCCGAGCCCGCGTTGGGATAGCCAGTTATGGCAGGAATCTAATGGTGGCGGTGCCCGTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS CCA 72 bp | GTCTGTGTAAGCTGCCACATGGATCAGGGAGTCGCGTaGACCGGCAAGCCTCCGTACTGCCTCCCTGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VCVSCHMDQGVA*TGKPPYCLPED Trigger: GTCCTCAGGGAGGCAGTACGGAGGCTTGCCGGTCCACGCGACTCCCTGATCCATGTGGCAGCTTACACAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CCA 72 bp | TGCGAGGGGGTTGGCCCTTGTAGTCCTGCAGGCTCTTaGTGGAAGCTACGTGCCATGGGGGCATCTCCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: CEGVGPCSPAGS*WKLRAMGASPL Trigger: GAGAGGAGATGCCCCCATGGCACGTAGCTTCCACCAAGAGCCTGCAGGACTACAAGGGCCAACCCCCTCGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CAA 72 bp | GAGGGTGCTGAGGAGGCCATTGGTGGCATCCTCCACTaGCTCAGCCAACAGCACATGCCGGTCCTTCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: EGAEEAIGGILH*LSQQHMPVLRL Trigger: GAGCCGAAGGACCGGCATGTGCTGTTGGCTGAGCAAGTGGAGGATGCCACCAATGGCCTCCTCAGCACCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS GCA 72 bp | GGAATGCTGTCAAGGCTCCTGATCAGGTCCGGCACATaGTGGTACTCCCCGACGGGCACCGCCACCATTAGA | + |
|
Preference number: 6 (lower is better) Translates to: GMLSRLLIRSGT*WYSPTGTATIR Trigger: TCTAATGGTGGCGGTGCCCGTCGGGGAGTACCAGCATGTGCCGGACCTGATCAGGAGCCTTGACAGCATTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS GCA 72 bp | GATGCCATTGCCTCTCAGCTTCTGGGCAGGGACAGCTaGATCTTCTGCCCCACTCCCGCCTGTGAGCATCAC | + |
|
Preference number: 6 (lower is better) Translates to: DAIASQLLGRDS*IFCPTPACEHH Trigger: GTGATGCTCACAGGCGGGAGTGGGGCAGAAGATGCAGCTGTCCCTGCCCAGAAGCTGAGAGGCAATGGCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CAA 72 bp | AGCTGCTTAGCCGGGAGAGCCACGGGCCCCTGGGACTaGCCATCCGTGACGATGATAAGAATCTGGGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: SCLAGRATGPWD*PSVTMIRIWGT Trigger: TGTGCCCCAGATTCTTATCATCGTCACGGATGGCAAGTCCCAGGGGCCCGTGGCTCTCCCGGCTAAGCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CAA 72 bp | GTGTCTGCTTGCCTTGATCCTCTCCAGCACAAGGCATaGCCAGCGAGCTCCCTGACGGTCTCCAGCGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VSACLDPLQHKA*PASSLTVSSVL Trigger: GAGGACGCTGGAGACCGTCAGGGAGCTCGCTGGCAATGCCTTGTGCTGGAGAGGATCAAGGCAAGCAGACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CAA 72 bp | ACACCGGGGCGGGCACCCCTCTGGACCGTCATCACCTaGTCCTCAATGTGCAGCAAGGCTGTACCAGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: TPGRAPLWTVIT*SSMCSKAVPAE Trigger: TTCTGCTGGTACAGCCTTGCTGCACATTGAGGACAAGGTGATGACGGTCCAGAGGGGTGCCCGCCCCGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS TCA 72 bp | GGTCTGTGTGGACCATCACATGCTTCGGGCTACCGGTaGTCTTCACCAGCTCCGCCTGCAGGATCTCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: GLCGPSHASGYR*SSPAPPAGSHC Trigger: GCAGTGAGATCCTGCAGGCGGAGCTGGTGAAGATCACCGGTAGCCCGAAGCATGTGATGGTCCACACAGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS GCA 72 bp | GCTCAGCTTCGGGGCACAGTTGACTTCCCCTCCGAATaGCAGTGGGCAGAGACAGTGGTACCTATCCACACC | + |
|
Preference number: 6 (lower is better) Translates to: AQLRGTVDFPSE*QWAETVVPIHT Trigger: GGTGTGGATAGGTACCACTGTCTCTGCCCACTGGCATTCGGAGGGGAAGTCAACTGTGCCCCGAAGCTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CCA 72 bp | TCTCTCAGCTGCTTAGCCGGGAGAGCCACGGGCCCCTaGGACTTGCCATCCGTGACGATGATAAGAATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLSCLAGRATGP*DLPSVTMIRIW Trigger: CCAGATTCTTATCATCGTCACGGATGGCAAGTCCCAGGGGCCCGTGGCTCTCCCGGCTAAGCAGCTGAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CCA 72 bp | ATGCTGTCAAGGCTCCTGATCAGGTCCGGCACATGCTaGTACTCCCCGACGGGCACCGCCACCATTAGATTC | + |
|
Preference number: 6 (lower is better) Translates to: MLSRLLIRSGTC*YSPTGTATIRF Trigger: GAATCTAATGGTGGCGGTGCCCGTCGGGGAGTACCAGCATGTGCCGGACCTGATCAGGAGCCTTGACAGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CCA 72 bp | GCCGTTCTTCAGGACACAGGTGCCTTCATTCATGCATaGGCTCGGCTTGCAGAGGTTGACTGGCAGCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: AVLQDTGAFIHA*ARLAEVDWQPG Trigger: GCCAGGCTGCCAGTCAACCTCTGCAAGCCGAGCCCATGCATGAATGAAGGCACCTGTGTCCTGAAGAACGGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CAA 90 bp | TCCCTGAGGACGGCTCCCACGCTCATAACCAAGACTGAGATGCCATaGCCTCTCAGCTTCTGGGCAGGGACAGCTGCATCTTCTGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SLRTAPTLITKTEMP*PLSFWAGTAASSAP Trigger: TGGGGCAGAAGATGCAGCTGTCCCTGCCCAGAAGCTGAGAGGCAATGGCATCTCAGTCTTGGTTATGAGCGTGGGAGCCGTCCTCAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CAA 90 bp | CTTTCTCTCAGCTGCTTAGCCGGGAGAGCCACGGGCCCCTGGGACTaGCCATCCGTGACGATGATAAGAATCTGGGGCACAGAGCCATTT | + |
|
Preference number: 6 (lower is better) Translates to: LSLSCLAGRATGPWD*PSVTMIRIWGTEPF Trigger: AAATGGCTCTGTGCCCCAGATTCTTATCATCGTCACGGATGGCAAGTCCCAGGGGCCCGTGGCTCTCCCGGCTAAGCAGCTGAGAGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS TCA 72 bp | CGATTCTGCATTCCAGGCTCAGCTTCGGGGCACAGTTaGCTTCCCCTCCGAATGCCAGTGGGCAGAGACAGT | + |
|
Preference number: 6 (lower is better) Translates to: RFCIPGSASGHS*LPLRMPVGRDS Trigger: ACTGTCTCTGCCCACTGGCATTCGGAGGGGAAGTCAACTGTGCCCCGAAGCTGAGCCTGGAATGCAGAATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS TCA 72 bp | TCAGTGAGCAGAACTACTACTCTGCGTGGCCTGTCCTaGCCAGTCCTGCTGGCACTCCCAAAGCCGTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SVSRTTTLRGLS*PVLLALPKPCS Trigger: AGAGCACGGCTTTGGGAGTGCCAGCAGGACTGGTCAGGACAGGCCACGCAGAGTAGTAGTTCTGCTCACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS TCA 72 bp | CTGGCCCAGACACCTCATCCTGGGAGCGTGATTCAGTaGGCAGAACTACTACTCTGCGTGGCCTGTCCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LAQTPHPGSVIQ*AELLLCVACPD Trigger: GTCAGGACAGGCCACGCAGAGTAGTAGTTCTGCTCACTGAATCACGCTCCCAGGATGAGGTGTCTGGGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS GCA 72 bp | GACAGTGGTACCTATCCACACCTTCTGGAATGCACGTaGCTCCATTTTGGCAGGGCTGGGAGTCACAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: DSGTYPHLLECT*LHFGRAGSHRG Trigger: GCCCCTGTGACTCCCAGCCCTGCCAAAATGGAGGCACGTGCATTCCAGAAGGTGTGGATAGGTACCACTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS GCA 72 bp | GAGCATGTCCTGATGGTACGGAAGGTCTGTGTAAGCTaGCACATGGATCAGGGAGTCGCGTGGACCGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: EHVLMVRKVCVS*HMDQGVAWTGK Trigger: CTTGCCGGTCCACGCGACTCCCTGATCCATGTGGCAGCTTACACAGACCTTCCGTACCATCAGGACATGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CAA 72 bp | AACAGGATGTCGACCGCGGCTGAGCACCACATTAATTaGCTGGCCACAGCGATCTTCCCCATGGTCTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: NRMSTAAEHHIN*LATAIFPMVSR Trigger: CCGGGAGACCATGGGGAAGATCGCTGTGGCCAGCAAATTAATGTGGTGCTCAGCCGCGGTCGACATCCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CAA 72 bp | TCGATTCTGCATTCCAGGCTCAGCTTCGGGGCACAGTaGACTTCCCCTCCGAATGCCAGTGGGCAGAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: SILHSRLSFGAQ*TSPPNASGQRQ Trigger: CTGTCTCTGCCCACTGGCATTCGGAGGGGAAGTCAACTGTGCCCCGAAGCTGAGCCTGGAATGCAGAATCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS CAA 90 bp | CCGTTCTTCAGGACACAGGTGCCTTCATTCATGCATGGGCTCGGCTaGCAGAGGTTGACTGGCAGCCTGGCTTCTCTACATAGCCACTCG | + |
|
Preference number: 6 (lower is better) Translates to: PFFRTQVPSFMHGLG*QRLTGSLASLHSHS Trigger: CGAGTGGCTATGTAGAGAAGCCAGGCTGCCAGTCAACCTCTGCAAGCCGAGCCCATGCATGAATGAAGGCACCTGTGTCCTGAAGAACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS CAA 72 bp | ACGGCTCCCACGCTCATAACCAAGACTGAGATGCCATaGCCTCTCAGCTTCTGGGCAGGGACAGCTGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: TAPTLITKTEMP*PLSFWAGTAAS Trigger: AGATGCAGCTGTCCCTGCCCAGAAGCTGAGAGGCAATGGCATCTCAGTCTTGGTTATGAGCGTGGGAGCCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS CAA 90 bp | CTGCTCAGGCGTTTCAGGGCTAGGCCCGTCTCGGTGCGCCCACCTTaGAAAACTATCCCCTTGATGCTTTCCTTCACTTCCTGTCGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LLRRFRARPVSVRPP*KTIPLMLSFTSCRV Trigger: AACTCGACAGGAAGTGAAGGAAAGCATCAAGGGGATAGTTTTCAAAGGTGGGCGCACCGAGACGGGCCTAGCCCTGAAACGCCTGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS CAA 90 bp | ACAGTGGTACCTATCCACACCTTCTGGAATGCACGTGCCTCCATTTaGGCAGGGCTGGGAGTCACAGGGGCCTGGACAGATGGTTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: TVVPIHTFWNARASI*AGLGVTGAWTDGSV Trigger: TACAGAACCATCTGTCCAGGCCCCTGTGACTCCCAGCCCTGCCAAAATGGAGGCACGTGCATTCCAGAAGGTGTGGATAGGTACCACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS CAA 90 bp | AAGAGGACATCGATTCTGCATTCCAGGCTCAGCTTCGGGGCACAGTaGACTTCCCCTCCGAATGCCAGTGGGCAGAGACAGTGGTACCTA | + |
|
Preference number: 6 (lower is better) Translates to: KRTSILHSRLSFGAQ*TSPPNASGQRQWYL Trigger: TAGGTACCACTGTCTCTGCCCACTGGCATTCGGAGGGGAAGTCAACTGTGCCCCGAAGCTGAGCCTGGAATGCAGAATCGATGTCCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
||
| CDS TCA 72 bp | TGCCTTCATTCATGCATGGGCTCGGCTTGCAGAGGTTaGCTGGCAGCCTGGCTTCTCTACATAGCCACTCGA | + |
|
Preference number: 6 (lower is better) Translates to: CLHSCMGSACRG*LAAWLLYIATR Trigger: TCGAGTGGCTATGTAGAGAAGCCAGGCTGCCAGTCAACCTCTGCAAGCCGAGCCCATGCATGAATGAAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS GCA 72 bp | CGAAGCGCTTGGACCTCTCGAAGCTCCCCTTCCCGATaGTGTGAGAGCCATCTAACAGAAACAGGATGTCGA | + |
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Preference number: 6 (lower is better) Translates to: RSAWTSRSSPSR*CESHLTETGCR Trigger: TCGACATCCTGTTTCTGTTAGATGGCTCTCACAGCATCGGGAAGGGGAGCTTCGAGAGGTCCAAGCGCTTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS GCA 72 bp | ACTCGCATCGGTAACTGCCGTTCTTCAGGACACAGGTaGCTTCATTCATGCATGGGCTCGGCTTGCAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: TRIGNCRSSGHR*LHSCMGSACRG Trigger: ACCTCTGCAAGCCGAGCCCATGCATGAATGAAGGCACCTGTGTCCTGAAGAACGGCAGTTACCGATGCGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CCA 72 bp | AGTCACAGGGGCCTGGACAGATGGTTCTGTAGCAGTTaGCAGGGTGTGTCTGGAACACTCTCTTCCAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SHRGLDRWFCSS*QGVSGTLSSSC Trigger: ACAGCTGGAAGAGAGTGTTCCAGACACACCCTGCCAACTGCTACAGAACCATCTGTCCAGGCCCCTGTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CCA 72 bp | TTGACTTCCCCTCCGAATGCCAGTGGGCAGAGACAGTaGTACCTATCCACACCTTCTGGAATGCACGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LTSPPNASGQRQ*YLSTPSGMHVP Trigger: AGGCACGTGCATTCCAGAAGGTGTGGATAGGTACCACTGTCTCTGCCCACTGGCATTCGGAGGGGAAGTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CAA 72 bp | CGTTTCAGGGCTAGGCCCGTCTCGGTGCGCCCACCTTaGAAAACTATCCCCTTGATGCTTTCCTTCACTTCC | + |
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Preference number: 6 (lower is better) Translates to: RFRARPVSVRPP*KTIPLMLSFTS Trigger: GGAAGTGAAGGAAAGCATCAAGGGGATAGTTTTCAAAGGTGGGCGCACCGAGACGGGCCTAGCCCTGAAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CAA 90 bp | TCTAACAGAAACAGGATGTCGACCGCGGCTGAGCACCACATTAATTaGCTGGCCACAGCGATCTTCCCCATGGTCTCCCGGTTCACATGC | + |
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Preference number: 6 (lower is better) Translates to: SNRNRMSTAAEHHIN*LATAIFPMVSRFTC Trigger: GCATGTGAACCGGGAGACCATGGGGAAGATCGCTGTGGCCAGCAAATTAATGTGGTGCTCAGCCGCGGTCGACATCCTGTTTCTGTTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CAA 90 bp | AGGGCTAGGCCCGTCTCGGTGCGCCCACCTTTGAAAACTATCCCCTaGATGCTTTCCTTCACTTCCTGTCGAGTTGAGAAGGAGTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: RARPVSVRPPLKTIP*MLSFTSCRVEKESK Trigger: CTTGGACTCCTTCTCAACTCGACAGGAAGTGAAGGAAAGCATCAAGGGGATAGTTTTCAAAGGTGGGCGCACCGAGACGGGCCTAGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS TCA 72 bp | ATCTTCCCCATGGTCTCCCGGTTCACATGCACTTCCTaGAGAGAGATGGTCGGGGACACTCTGAAGAACAGG | + |
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Preference number: 6 (lower is better) Translates to: IFPMVSRFTCTS*REMVGDTLKNR Trigger: CCTGTTCTTCAGAGTGTCCCCGACCATCTCTCTTCAGGAAGTGCATGTGAACCGGGAGACCATGGGGAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CAA 72 bp | AAACCGGAGGGTGCATTTCCTGATGAAGCTCTGCATTaGGGCAAAGTTCTCACGTCCCACAGAGGCAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: KPEGAFPDEALH*GKVLTSHRGRG Trigger: GCCTCTGCCTCTGTGGGACGTGAGAACTTTGCCCAAATGCAGAGCTTCATCAGGAAATGCACCCTCCGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS TCA 72 bp | TGTCGAGTTGAGAAGGAGTCCAAGGGGAATTCCAGATaGGGAGTGGAACCAAACTGCAAGGCTCCGACTCTG | + |
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Preference number: 6 (lower is better) Translates to: CRVEKESKGNSR*GVEPNCKAPTL Trigger: CAGAGTCGGAGCCTTGCAGTTTGGTTCCACTCCTCATCTGGAATTCCCCTTGGACTCCTTCTCAACTCGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CAA 72 bp | CCCGTCTCGGTGCGCCCACCTTTGAAAACTATCCCCTaGATGCTTTCCTTCACTTCCTGTCGAGTTGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: PVSVRPPLKTIP*MLSFTSCRVEK Trigger: CTTCTCAACTCGACAGGAAGTGAAGGAAAGCATCAAGGGGATAGTTTTCAAAGGTGGGCGCACCGAGACGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS CAA 90 bp | ATTCACATCAAACCGGAGGGTGCATTTCCTGATGAAGCTCTGCATTaGGGCAAAGTTCTCACGTCCCACAGAGGCAGAGGCATCCAACAG | + |
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Preference number: 6 (lower is better) Translates to: IHIKPEGAFPDEALH*GKVLTSHRGRGIQQ Trigger: CTGTTGGATGCCTCTGCCTCTGTGGGACGTGAGAACTTTGCCCAAATGCAGAGCTTCATCAGGAAATGCACCCTCCGGTTTGATGTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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| CDS GCA 72 bp | ACATCAAACCGGAGGGTGCATTTCCTGATGAAGCTCTaGATTTGGGCAAAGTTCTCACGTCCCACAGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: TSNRRVHFLMKL*IWAKFSRPTEA Trigger: TGCCTCTGTGGGACGTGAGAACTTTGCCCAAATGCAGAGCTTCATCAGGAAATGCACCCTCCGGTTTGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026068.8 |
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