Pregenerated sensors for VWA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042116Ensembl transcript IDs: ENSMUST00000042196.4
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCCAGGCAGGACCTGGATGGTCCTGAACGCCTCCTCAAAGCCATaGGTAGTCCCTGCCACCAGAGGGCCCAGCCTTTGGCACAGGTTG | + |
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Preference number: 1 (lower is better) Translates to: GPGRTWMVLNASSKP*VVPATRGPSLWHRL Trigger: CAACCTGTGCCAAAGGCTGGGCCCTCTGGTGGCAGGGACTACGCATGGCTTTGAGGAGGCGTTCAGGACCATCCAGGTCCTGCCTGGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR GCA 90 bp | GACCTGGATGGTCCTGAACGCCTCCTCAAAGCCATGCGTAGTCCCTaGCACCAGAGGGCCCAGCCTTTGGCACAGGTTGGAAACTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: DLDGPERLLKAMRSP*HQRAQPLAQVGNSV Trigger: CACAGAGTTTCCAACCTGTGCCAAAGGCTGGGCCCTCTGGTGGCAGGGACTACGCATGGCTTTGAGGAGGCGTTCAGGACCATCCAGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR TCA 90 bp | CCAAGGTCTCGTCCCATTCCTGTGAAAAGACTGCATCCTTGGCACTaGTCGAGGGCCCAGTGCAGGTCCTGGGCAGGAAGGCAGAGTCAG | + |
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Preference number: 1 (lower is better) Translates to: PRSRPIPVKRLHPWH*SRAQCRSWAGRQSQ Trigger: CTGACTCTGCCTTCCTGCCCAGGACCTGCACTGGGCCCTCGATCAGTGCCAAGGATGCAGTCTTTTCACAGGAATGGGACGAGACCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR TCA 90 bp | AGGCCCTGGTATGAAGCTGGCAGGGAACATGGAGGGACAGGAGCCTaGATGATCCGTGTACGGATGCTGCAGACCTGCTTCCCCTACTCC | + |
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Preference number: 1 (lower is better) Translates to: RPWYEAGREHGGTGA*MIRVRMLQTCFPYS Trigger: GGAGTAGGGGAAGCAGGTCTGCAGCATCCGTACACGGATCATTCAGGCTCCTGTCCCTCCATGTTCCCTGCCAGCTTCATACCAGGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR TCA 90 bp | AACTTGACCTACTGCAGACACTGGATCGCTCGCGGGCTGCAGAAGTaGGGCCCTGGTATGAAGCTGGCAGGGAACATGGAGGGACAGGAG | + |
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Preference number: 1 (lower is better) Translates to: NLTYCRHWIARGLQK*GPGMKLAGNMEGQE Trigger: CTCCTGTCCCTCCATGTTCCCTGCCAGCTTCATACCAGGGCCTCACTTCTGCAGCCCGCGAGCGATCCAGTGTCTGCAGTAGGTCAAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR CCA 90 bp | CTCTCTTCCCTTTCTCCTACCCACTTTCTAGGCCCAGGCAGGACCTaGATGGTCCTGAACGCCTCCTCAAAGCCATGCGTAGTCCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: LSSLSPTHFLGPGRT*MVLNASSKPCVVPA Trigger: GGCAGGGACTACGCATGGCTTTGAGGAGGCGTTCAGGACCATCCAGGTCCTGCCTGGGCCTAGAAAGTGGGTAGGAGAAAGGGAAGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR TCA 90 bp | CCTGGTATGAAGCTGGCAGGGAACATGGAGGGACAGGAGCCTGAATaGTCCGTGTACGGATGCTGCAGACCTGCTTCCCCTACTCCCCAA | + |
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Preference number: 1 (lower is better) Translates to: PGMKLAGNMEGQEPE*SVYGCCRPASPTPQ Trigger: TTGGGGAGTAGGGGAAGCAGGTCTGCAGCATCCGTACACGGATCATTCAGGCTCCTGTCCCTCCATGTTCCCTGCCAGCTTCATACCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR GCA 90 bp | AACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCGCAAGTGCTAGGATTAAAGGTGCGCGCCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: NSLCRPGWPRTQKSA*LCLASARIKGARLH Trigger: GTGGAGGCGCGCACCTTTAATCCTAGCACTTGCGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR TCA 90 bp | AGATGCCCCAGGGTAATGGTGATGGCAGGAGGTAGCCCACCTGCATaGCACCTTGCTCCCTACACTAAAGCAGGAGGCTCCCTTAGAATC | + |
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Preference number: 1 (lower is better) Translates to: RCPRVMVMAGGSPPA*HLAPYTKAGGSLRI Trigger: GATTCTAAGGGAGCCTCCTGCTTTAGTGTAGGGAGCAAGGTGTCATGCAGGTGGGCTACCTCCTGCCATCACCATTACCCTGGGGCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR CCA 90 bp | GCACAGGTTGGAAACTCTGTGGCCTCCTCTCCTGAAGGCTTGTCCTaGGTCTTATGTCCTCAACCTGACCTCAGACACTGTCCATCCCCT | + |
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Preference number: 1 (lower is better) Translates to: AQVGNSVASSPEGLS*VLCPQPDLRHCPSP Trigger: AGGGGATGGACAGTGTCTGAGGTCAGGTTGAGGACATAAGACCCAGGACAAGCCTTCAGGAGAGGAGGCCACAGAGTTTCCAACCTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR CCA 90 bp | CAAACCTACATCTGTCCTGGATGCAGATGGCCTCAGCCTCTGGCCTaGAAACTGACATCACAGGAAGTATCTGAGCTCCAACTTTTGATC | + |
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Preference number: 1 (lower is better) Translates to: QTYICPGCRWPQPLA*KLTSQEVSELQLLI Trigger: GATCAAAAGTTGGAGCTCAGATACTTCCTGTGATGTCAGTTTCCAGGCCAGAGGCTGAGGCCATCTGCATCCAGGACAGATGTAGGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR CAA 90 bp | CCATGCGTAGTCCCTGCCACCAGAGGGCCCAGCCTTTGGCACAGGTaGGAAACTCTGTGGCCTCCTCTCCTGAAGGCTTGTCCTGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: PCVVPATRGPSLWHR*ETLWPPLLKACPGS Trigger: AGACCCAGGACAAGCCTTCAGGAGAGGAGGCCACAGAGTTTCCAACCTGTGCCAAAGGCTGGGCCCTCTGGTGGCAGGGACTACGCATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR-3UTR CCA 90 bp | CCCACCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCAGGAGCCCAGTGCAGGTCCTaGGCAGGAAGGCAGAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: PTNTTRSVHGQCSFGCPGAQCRS*AGRQSQ Trigger: CTGACTCTGCCTTCCTGCCCAGGACCTGCACTGGGC...TCCTGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR-3UTR TCA 90 bp | CCCACCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCAGGAGGTAGCCCACCTGCATaGCACCTTGCTCCCTACACT | + |
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Preference number: 2 (lower is better) Translates to: PTNTTRSVHGQCSFGCPGGSPPA*HLAPYT Trigger: AGTGTAGGGAGCAAGGTGTCATGCAGGTGGGCTACC...TCCTGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR-3UTR GCA 90 bp | CCTCCCACCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCACCAAGGACCACCGTGTaGTCAACTCCACTGGCAACC | + |
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Preference number: 2 (lower is better) Translates to: PPTNTTRSVHGQCSFGCPPRTTV*STPLAT Trigger: GGTTGCCAGTGGAGTTGAGCACACGGTGGTCCTTGG...TGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGGTGGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR-3UTR CCA 90 bp | CCCACCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCAGGAGTACAGCACAGGCGGTaGTGGGGACACCCCTGTAAA | + |
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Preference number: 2 (lower is better) Translates to: PTNTTRSVHGQCSFGCPGVQHRR*WGHPCK Trigger: TTTACAGGGGTGTCCCCACCACCGCCTGTGCTGTAC...TCCTGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR-3UTR GCA 90 bp | CCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCAGGATGAGCGGATGCTGCAGACCTaGTTCCCCTACTCCCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: PTQHVRCMASAPLGVQDERMLQT*FPYSPN Trigger: GTTTGGGGAGTAGGGGAAGCAGGTCTGCAGCATCCG...CTCATCCTGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR-3UTR CCA 90 bp | CCCACCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCAGGAGGCGGCGATGACCAGTaGGGAAACGACGAAAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: PTNTTRSVHGQCSFGCPGGGDDQ*GNDERN Trigger: ATTCCTTTCGTCGTTTCCCCACTGGTCATCGCCGCC...TCCTGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR CAA 90 bp | CTAAATGCCAAGGTCTCGTCCCATTCCTGTGAAAAGACTGCATCCTaGGCACTGATCGAGGGCCCAGTGCAGGTCCTGGGCAGGAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: LNAKVSSHSCEKTAS*ALIEGPVQVLGRKA Trigger: TGCCTTCCTGCCCAGGACCTGCACTGGGCCCTCGATCAGTGCCAAGGATGCAGTCTTTTCACAGGAATGGGACGAGACCTTGGCATTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR-3UTR TCA 90 bp | CCTCCCACCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCACTCGTCCCATTCCTGTaGAAAGACTGCATCCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: PPTNTTRSVHGQCSFGCPLVPFL*KDCILG Trigger: GCCAAGGATGCAGTCTTTTCACAGGAATGGGACGAG...TGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGGTGGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCACCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCAAGGTTGGAAACTCTGTaGCCTCCTCTCCTGAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: PPTNTTRSVHGQCSFGCPRLETL*PPLLKA Trigger: AGCCTTCAGGAGAGGAGGCCACAGAGTTTCCAACCT...TGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGGTGGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR CAA 90 bp | GTCAGTGACCCTGACAGATCCCGGCCTCTAGGCTGGCAGGACATCTaGATGAAAACCAATGCCACATCATCAGCCTCCCAGCATACCTCC | + |
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Preference number: 2 (lower is better) Translates to: VSDPDRSRPLGWQDI*MKTNATSSASQHTS Trigger: GGAGGTATGCTGGGAGGCTGATGATGTGGCATTGGTTTTCATCAAGATGTCCTGCCAGCCTAGAGGCCGGGATCTGTCAGGGTCACTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR-3UTR TCA 90 bp | CCCACCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCAGGACTTATGTCCTCAACCTaGCCTCAGACACTGTCCATC | + |
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Preference number: 2 (lower is better) Translates to: PTNTTRSVHGQCSFGCPGLMSST*PQTLSI Trigger: GATGGACAGTGTCTGAGGTCAGGTTGAGGACATAAG...TCCTGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR-3UTR GCA 90 bp | CCCACCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCAGGACTCCTGGATCTCACTTaGAGCCAAAGTAGTGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: PTNTTRSVHGQCSFGCPGLLDLT*SQSSVR Trigger: CCTTACACTACTTTGGCTGCAAGTGAGATCCAGGAG...TCCTGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCTCTCTCCATACCCAAAGTCTACCCCACCTCTCTCAATACTTAGCTCCTGCCTCCTCAAAGCCATaGGTAGTCCCTGCCACCAGA | + |
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Preference number: 2 (lower is better) Translates to: LCSLHTQSLPHLSQYLAPASSKP*VVPATR Trigger: TCTGGTGGCAGGGACTACGCATGGCTTTGAGGAGGC...AGGAGCTAAGTATTGAGAGAGGTGGGGTAGACTTTGGGTATGGAGAGAGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR-3UTR CCA 90 bp | CCCACCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCAGGATTAGTGGGGAAGAGATaGAGTAAGCTTGGGATAAGG | + |
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Preference number: 2 (lower is better) Translates to: PTNTTRSVHGQCSFGCPGLVGKR*SKLGIR Trigger: CCTTATCCCAAGCTTACTCCATCTCTTCCCCACTAA...TCCTGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR-3UTR TCA 90 bp | CCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCAGGATGAGTATCTTTCCTTTCCTTaGGGAAGTTTTCGGGAATCC | + |
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Preference number: 2 (lower is better) Translates to: PTQHVRCMASAPLGVQDEYLSFP*GSFRES Trigger: GGATTCCCGAAAACTTCCTCAAGGAAAGGAAAGATA...CTCATCCTGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR CAA 90 bp | GCCACATCATCAGCCTCCCAGCATACCTCCCTATCTTTCCTTTCCTaGAGGAAGTTTTCGGGAATCCTGTCTACACTAGTCTCTCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: ATSSASQHTSLSFLS*RKFSGILSTLVSLP Trigger: GGGAAGAGAGACTAGTGTAGACAGGATTCCCGAAAACTTCCTCAAGGAAAGGAAAGATAGGGAGGTATGCTGGGAGGCTGATGATGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR CAA 90 bp | GTATGTCAGGCACAGGGACTCATTGTGGCTCTCTCCAGTGGCCAGTaGACCTACAGTCATCTGAGCAAACAGAATGGGAAACACAAATTG | + |
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Preference number: 2 (lower is better) Translates to: VCQAQGLIVALSSGQ*TYSHLSKQNGKHKL Trigger: CAATTTGTGTTTCCCATTCTGTTTGCTCAGATGACTGTAGGTCAACTGGCCACTGGAGAGAGCCACAATGAGTCCCTGTGCCTGACATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR CAA 90 bp | TTTAATGAGACTGCAGGCACAGTTTATGTCTGTCTGACTGTATTGTaGTTAGAGTCCGGGTCATTAGTGGGGAAGAGATGGAGTAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: FNETAGTVYVCLTVL*LESGSLVGKRWSKL Trigger: AAGCTTACTCCATCTCTTCCCCACTAATGACCCGGACTCTAACAACAATACAGTCAGACAGACATAAACTGTGCCTGCAGTCTCATTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR CAA 90 bp | CATTTTAATGAGACTGCAGGCACAGTTTATGTCTGTCTGACTGTATaGTTGTTAGAGTCCGGGTCATTAGTGGGGAAGAGATGGAGTAAG | + |
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Preference number: 2 (lower is better) Translates to: HFNETAGTVYVCLTV*LLESGSLVGKRWSK Trigger: CTTACTCCATCTCTTCCCCACTAATGACCCGGACTCTAACAACAATACAGTCAGACAGACATAAACTGTGCCTGCAGTCTCATTAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR TCA 72 bp | GGATCGCTCGCGGGCTGCAGAAGTGAGGCCCTGGTATaGAGCTGGCAGGGAACATGGAGGGACAGGAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: GSLAGCRSEALV*SWQGTWRDRSL Trigger: CAGGCTCCTGTCCCTCCATGTTCCCTGCCAGCTTCATACCAGGGCCTCACTTCTGCAGCCCGCGAGCGATCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR GCA 72 bp | GGTCCTGAACGCCTCCTCAAAGCCATGCGTAGTCCCTaGCACCAGAGGGCCCAGCCTTTGGCACAGGTTGGA | + |
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Preference number: 3 (lower is better) Translates to: GPERLLKAMRSP*HQRAQPLAQVG Trigger: TCCAACCTGTGCCAAAGGCTGGGCCCTCTGGTGGCAGGGACTACGCATGGCTTTGAGGAGGCGTTCAGGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR CCA 72 bp | AGGGCCGAGCAGTGTGTAGTACAGCACAGGCGGTGGTaGGGACACCCCTGTAAAGCCTCCTGCCCTCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: RAEQCVVQHRRW*GHPCKASCPLS Trigger: ACTCAGAGGGCAGGAGGCTTTACAGGGGTGTCCCCACCACCGCCTGTGCTGTACTACACACTGCTCGGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR CCA 72 bp | ACACTGGATCGCTCGCGGGCTGCAGAAGTGAGGCCCTaGTATGAAGCTGGCAGGGAACATGGAGGGACAGGA | + |
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Preference number: 3 (lower is better) Translates to: TLDRSRAAEVRP*YEAGREHGGTG Trigger: TCCTGTCCCTCCATGTTCCCTGCCAGCTTCATACCAGGGCCTCACTTCTGCAGCCCGCGAGCGATCCAGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR TCA 72 bp | CGTCCCATTCCTGTGAAAAGACTGCATCCTTGGCACTaGTCGAGGGCCCAGTGCAGGTCCTGGGCAGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: RPIPVKRLHPWH*SRAQCRSWAGR Trigger: CCTTCCTGCCCAGGACCTGCACTGGGCCCTCGATCAGTGCCAAGGATGCAGTCTTTTCACAGGAATGGGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR TCA 72 bp | TACTGCAGACACTGGATCGCTCGCGGGCTGCAGAAGTaGGGCCCTGGTATGAAGCTGGCAGGGAACATGGAG | + |
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Preference number: 3 (lower is better) Translates to: YCRHWIARGLQK*GPGMKLAGNME Trigger: CTCCATGTTCCCTGCCAGCTTCATACCAGGGCCTCACTTCTGCAGCCCGCGAGCGATCCAGTGTCTGCAGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR-3UTR CAA 90 bp | ACACTGGATCGCTCGCGGGCTGCAGAAGTGAGGCCCTGGTATGAAGCTGGCAGGTCCTCTCCTGAAGGCTaGTCCTGGGTCTTATGTCCT | + |
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Preference number: 3 (lower is better) Translates to: TLDRSRAAEVRPWYEAGRSSPEG*SWVLCP Trigger: AGGACATAAGACCCAGGACAAGCCTTCAGGAGAGGA...CCTGCCAGCTTCATACCAGGGCCTCACTTCTGCAGCCCGCGAGCGATCCAGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR-3UTR CAA 90 bp | CCTCCCACCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCAGAAAAGACTGCATCCTaGGCACTGATCGAGGGCCCA | + |
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Preference number: 3 (lower is better) Translates to: PPTNTTRSVHGQCSFGCPEKTAS*ALIEGP Trigger: TGGGCCCTCGATCAGTGCCAAGGATGCAGTCTTTTC...TGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGGTGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR TCA 72 bp | AAGCTGGCAGGGAACATGGAGGGACAGGAGCCTGAATaGTCCGTGTACGGATGCTGCAGACCTGCTTCCCCT | + |
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Preference number: 3 (lower is better) Translates to: KLAGNMEGQEPE*SVYGCCRPASP Trigger: AGGGGAAGCAGGTCTGCAGCATCCGTACACGGATCATTCAGGCTCCTGTCCCTCCATGTTCCCTGCCAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR GCA 72 bp | ACAAACAGCCACCTCCCACCAACACAACACGTTCGGTaGATGGCCAGTGCTCCTTTGGGTGTCCAGGATGAG | + |
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Preference number: 3 (lower is better) Translates to: TNSHLPPTQHVR*MASAPLGVQDE Trigger: CTCATCCTGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGGTGGGAGGTGGCTGTTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGCCTCGCAAGTGCTAGGATTAAAGGTGCG | + |
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Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSA*LCLASARIKGA Trigger: CGCACCTTTAATCCTAGCACTTGCGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR-3UTR CAA 90 bp | CCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCAGGATGAGGGCCTACATAGGGACTaGAGAGGAAACCTGTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: PTQHVRCMASAPLGVQDEGLHRD*RGNLFL Trigger: CAGGAACAGGTTTCCTCTCAAGTCCCTATGTAGGCC...CTCATCCTGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR TCA 72 bp | TATGAAGCTGGCAGGGAACATGGAGGGACAGGAGCCTaGATGATCCGTGTACGGATGCTGCAGACCTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: YEAGREHGGTGA*MIRVRMLQTCF Trigger: GAAGCAGGTCTGCAGCATCCGTACACGGATCATTCAGGCTCCTGTCCCTCCATGTTCCCTGCCAGCTTCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR-3UTR CAA 90 bp | ACACTGGATCGCTCGCGGGCTGCAGAAGTGAGGCCCTGGTATGAAGCTGGCAGGCTATCTTTCCTTTCCTaGAGGAAGTTTTCGGGAATC | + |
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Preference number: 3 (lower is better) Translates to: TLDRSRAAEVRPWYEAGRLSFLS*RKFSGI Trigger: GATTCCCGAAAACTTCCTCAAGGAAAGGAAAGATAG...CCTGCCAGCTTCATACCAGGGCCTCACTTCTGCAGCCCGCGAGCGATCCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR GCA 72 bp | GTGAGGCCAACATACCAAACCTACATCTGTCCTGGATaGAGATGGCCTCAGCCTCTGGCCTGGAAACTGACA | + |
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Preference number: 3 (lower is better) Translates to: VRPTYQTYICPG*RWPQPLAWKLT Trigger: TGTCAGTTTCCAGGCCAGAGGCTGAGGCCATCTGCATCCAGGACAGATGTAGGTTTGGTATGTTGGCCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR CCA 72 bp | GGAAACTCTGTGGCCTCCTCTCCTGAAGGCTTGTCCTaGGTCTTATGTCCTCAACCTGACCTCAGACACTGT | + |
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Preference number: 3 (lower is better) Translates to: GNSVASSPEGLS*VLCPQPDLRHC Trigger: ACAGTGTCTGAGGTCAGGTTGAGGACATAAGACCCAGGACAAGCCTTCAGGAGAGGAGGCCACAGAGTTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR CCA 72 bp | CCAACATACCAAACCTACATCTGTCCTGGATGCAGATaGCCTCAGCCTCTGGCCTGGAAACTGACATCACAG | + |
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Preference number: 3 (lower is better) Translates to: PTYQTYICPGCR*PQPLAWKLTSQ Trigger: CTGTGATGTCAGTTTCCAGGCCAGAGGCTGAGGCCATCTGCATCCAGGACAGATGTAGGTTTGGTATGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| 3UTR CCA 72 bp | GAATGTGAGGCCAACATACCAAACCTACATCTGTCCTaGATGCAGATGGCCTCAGCCTCTGGCCTGGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: ECEANIPNLHLS*MQMASASGLET Trigger: AGTTTCCAGGCCAGAGGCTGAGGCCATCTGCATCCAGGACAGATGTAGGTTTGGTATGTTGGCCTCACATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| 3UTR-3UTR CAA 90 bp | AGATGGAGTAAGCTTGGGATAAGGCAAATGATTCTGAGAGGAGAGGAGAGGCCTAGCCTTTGGCACAGGTaGGAAACTCTGTGGCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RWSKLGIRQMILRGEERPSLWHR*ETLWPP Trigger: AGGAGGCCACAGAGTTTCCAACCTGTGCCAAAGGCT...AGGCCTCTCCTCTCCTCTCAGAATCATTTGCCTTATCCCAAGCTTACTCCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| 3UTR TCA 72 bp | GCCTCTGGCCTGGAAACTGACATCACAGGAAGTATCTaGGCTCCAACTTTTGATCAACAGGTGAAACATGAA | + |
|
Preference number: 3 (lower is better) Translates to: ASGLETDITGSI*APTFDQQVKHE Trigger: TTCATGTTTCACCTGTTGATCAAAAGTTGGAGCTCAGATACTTCCTGTGATGTCAGTTTCCAGGCCAGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| 3UTR CCA 72 bp | TTGTTGTTAGAGTCCGGGTCATTAGTGGGGAAGAGATaGAGTAAGCTTGGGATAAGGCAAATGATTCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LLLESGSLVGKR*SKLGIRQMILR Trigger: TCTCAGAATCATTTGCCTTATCCCAAGCTTACTCCATCTCTTCCCCACTAATGACCCGGACTCTAACAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| 3UTR TCA 72 bp | AATTGCTTGGAGGAACTTCCATATTTTAGGGGAATGTaGGGCCAACATACCAAACCTACATCTGTCCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: NCLEELPYFRGM*GQHTKPTSVLD Trigger: ATCCAGGACAGATGTAGGTTTGGTATGTTGGCCTCACATTCCCCTAAAATATGGAAGTTCCTCCAAGCAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| 3UTR GCA 72 bp | ACTTTTGATCAACAGGTGAAACATGAAACCTGTAAGTaGACACATAGGCTTACTGCCCTGACAAGGACACAT | + |
|
Preference number: 3 (lower is better) Translates to: TFDQQVKHETCK*THRLTALTRTH Trigger: ATGTGTCCTTGTCAGGGCAGTAAGCCTATGTGTGCACTTACAGGTTTCATGTTTCACCTGTTGATCAAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS-3UTR CCA 90 bp | CACCAGAGGGCCCAGCCTTTGGCACAGGTTGGAAACTCTGTGGCCTCCTCTCCTCACCTTGGGAACCCCTaGCCGGGCACCTGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HQRAQPLAQVGNSVASSPHLGNP*PGTCFL Trigger: GAGGAAGCAGGTGCCCGGCCAGGGGTTCCCAAGGTG...AGGAGAGGAGGCCACAGAGTTTCCAACCTGTGCCAAAGGCTGGGCCCTCTGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS-3UTR CCA 90 bp | CCCACCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCAGGACCCACACCAGCACCTTaGGAACCCCTGGCCGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PTNTTRSVHGQCSFGCPGPTPAP*EPLAGH Trigger: GTGCCCGGCCAGGGGTTCCCAAGGTGCTGGTGTGGG...TCCTGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS-3UTR CCA 90 bp | CCCACCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCAGGAGGCCCACGGGGTCGCTaGAGCCACCATCTGTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: PTNTTRSVHGQCSFGCPGGPRGR*SHHLSP Trigger: GGGTGACAGATGGTGGCTCCAGCGACCCCGTGGGCC...TCCTGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS-3UTR CCA 90 bp | TCCCTGCCACCAGAGGGCCCAGCCTTTGGCACAGGTTGGAAACTCTGTGGCCTCCAGTCACCAGGTAAGTaGTGCAGGGCGTCAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPPEGPAFGTGWKLCGLQSPGK*CRASGP Trigger: AGGGCCTGACGCCCTGCACCACTTACCTGGTGACTG...GAGGCCACAGAGTTTCCAACCTGTGCCAAAGGCTGGGCCCTCTGGTGGCAGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS-3UTR GCA 90 bp | GCAGGACCGGCATCCCATCTCCCCACCCGACTCCATCCACAAGAAAACCCACGACCTCCTCTTGCAGTGTaGGTACTCGCACGTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: AGPASHLPTRLHPQENPRPPLAV*VLARAA Trigger: CGCAGCACGTGCGAGTACGCACACTGCAAGAGGAGG...TCGTGGGTTTTCTTGTGGATGGAGTCGGGTGGGGAGATGGGATGCCGGTCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| 3UTR CAA 72 bp | GTCCCTGCCACCAGAGGGCCCAGCCTTTGGCACAGGTaGGAAACTCTGTGGCCTCCTCTCCTGAAGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VPATRGPSLWHR*ETLWPPLLKAC Trigger: ACAAGCCTTCAGGAGAGGAGGCCACAGAGTTTCCAACCTGTGCCAAAGGCTGGGCCCTCTGGTGGCAGGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS-3UTR GCA 90 bp | CCTCCCACCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCACTGCGCGGCCTCGCATaGGAGATGACGATGCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPTNTTRSVHGQCSFGCPLRGLA*EMTMRS Trigger: AGAACGCATCGTCATCTCGCATGCGAGGCCGCGCAG...TGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGGTGGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS-3UTR GCA 90 bp | CCTCCCACCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCATCACCAGGTAAGTGGTaGAGGGCGTCAGGCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPTNTTRSVHGQCSFGCPSPGKW*RASGPG Trigger: TCCAGGGCCTGACGCCCTGCACCACTTACCTGGTGA...TGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGGTGGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS-3UTR CCA 90 bp | CACCAGAGGGCCCAGCCTTTGGCACAGGTTGGAAACTCTGTGGCCTCCTCTCCTACAGGCGGAAGCCACTaGACAGAACCTCCGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HQRAQPLAQVGNSVASSPTGGSH*TEPPRH Trigger: ATGCCTCGGAGGTTCTGTCCAGTGGCTTCCGCCTGT...AGGAGAGGAGGCCACAGAGTTTCCAACCTGTGCCAAAGGCTGGGCCCTCTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS-3UTR TCA 90 bp | CCTCAGACACTGTCCATCCCCTCGCCAAGAGTTGCCCAAGGACCACCGTGTGCTAAAGTAAACTCTGTGTaGGGCTGGCTGCCCACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PQTLSIPSPRVAQGPPCAKVNSV*GWLPTC Trigger: GCACGTGGGCAGCCAGCCTCACACAGAGTTTACTTT...AGCACACGGTGGTCCTTGGGCAACTCTTGGCGAGGGGATGGACAGTGTCTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS-3UTR TCA 90 bp | GACCTGGATGGTCCTGAACGCCTCCTCAAAGCCATGCGTAGTCCCTGCCACCAGAGAACCTCCGAGGCATaGAGCTGTTGTGGCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: DLDGPERLLKAMRSPCHQRTSEA*SCCGCI Trigger: GATGCAGCCACAACAGCTTCATGCCTCGGAGGTTCT...CTGGTGGCAGGGACTACGCATGGCTTTGAGGAGGCGTTCAGGACCATCCAGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS-3UTR GCA 90 bp | CCTCCCACCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCACCCTGGCCGGGCACCTaGTTCCTCAGCAAACAATTG | + |
|
Preference number: 4 (lower is better) Translates to: PPTNTTRSVHGQCSFGCPPWPGT*FLSKQL Trigger: CAATTGTTTGCTGAGGAAGCAGGTGCCCGGCCAGGG...TGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGGTGGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS-3UTR CCA 90 bp | ACACTGGATCGCTCGCGGGCTGCAGAAGTGAGGCCCTGGTATGAAGCTGGCAGGCATAGTGTGACACGCTaGCTGAGCTGTCCAACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLDRSRAAEVRPWYEAGRHSVTR*LSCPTG Trigger: TCCTGTTGGACAGCTCAGCCAGCGTGTCACACTATG...CCTGCCAGCTTCATACCAGGGCCTCACTTCTGCAGCCCGCGAGCGATCCAGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS-3UTR GCA 90 bp | GCAGGACCGGCATCCCATCTCCCCACCCGACTCCATCCACAAGAAAACCCACGAATCGTAGCCACCAGCTaGCCCACAAATTCCCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: AGPASHLPTRLHPQENPRIVATS*PTNSRT Trigger: AGTTCGGGAATTTGTGGGGCAGCTGGTGGCTACGAT...TCGTGGGTTTTCTTGTGGATGGAGTCGGGTGGGGAGATGGGATGCCGGTCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| 3UTR CAA 72 bp | AAGGTCTCGTCCCATTCCTGTGAAAAGACTGCATCCTaGGCACTGATCGAGGGCCCAGTGCAGGTCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KVSSHSCEKTAS*ALIEGPVQVLG Trigger: GCCCAGGACCTGCACTGGGCCCTCGATCAGTGCCAAGGATGCAGTCTTTTCACAGGAATGGGACGAGACCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| 3UTR CAA 72 bp | CCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTaGGGTGTCCAGGATGAGCCCTACCGTGCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PTQHVRCMASAP*GVQDEPYRAPS Trigger: TGAAGGAGCACGGTAGGGCTCATCCTGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS-3UTR GCA 90 bp | CCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCAGGATGAGTCCACAAAGTGTAGGTaGTTCTCGGCAGGAGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTQHVRCMASAPLGVQDESTKCR*FSAGAE Trigger: CTCGGCTCCTGCCGAGAAGCACCTACACTTTGTGGA...CTCATCCTGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS-3UTR TCA 90 bp | CCCACCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCAGGAGGACTCAGGCAGCAGTaGTACTTCATAGTCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PTNTTRSVHGQCSFGCPGGLRQQ*YFIVCV Trigger: GACACAGACTATGAAGTATCACTGCTGCCTGAGTCC...TCCTGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS-3UTR GCA 90 bp | CCTCCCACCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCATTTGGCATAAGCCAGTaGCAGGCCTGTGTTGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: PPTNTTRSVHGQCSFGCPFGISQ*QACVGI Trigger: GATACCAACACAGGCCTGGCACTGGCTTATGCCAAA...TGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGGTGGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| 3UTR CAA 72 bp | CCTGACAGATCCCGGCCTCTAGGCTGGCAGGACATCTaGATGAAAACCAATGCCACATCATCAGCCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PDRSRPLGWQDI*MKTNATSSASQ Trigger: CTGGGAGGCTGATGATGTGGCATTGGTTTTCATCAAGATGTCCTGCCAGCCTAGAGGCCGGGATCTGTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS-3UTR GCA 90 bp | AGATGGAGTAAGCTTGGGATAAGGCAAATGATTCTGAGAGGAGAGGAGAGGCCTTGCGGCCTCAGGAGGTaGACGTTGGACTCAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RWSKLGIRQMILRGEERPCGLRR*TLDSGS Trigger: GCTGCCTGAGTCCAACGTGCACCTCCTGAGGCCGCA...AGGCCTCTCCTCTCCTCTCAGAATCATTTGCCTTATCCCAAGCTTACTCCATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS-3UTR GCA 90 bp | CTTGAGGAAGTTTTCGGGAATCCTGTCTACACTAGTCTCTCTTCCCTTTCTCCTGGCCCGGCCTCCTCTTaGAGTGTGCGTACTCGCACG | + |
|
Preference number: 4 (lower is better) Translates to: LEEVFGNPVYTSLSSLSPGPASS*SVRTRT Trigger: CGTGCGAGTACGCACACTGCAAGAGGAGGCCGGGCC...AGGAGAAAGGGAAGAGAGACTAGTGTAGACAGGATTCCCGAAAACTTCCTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS-3UTR CCA 90 bp | TCCCTGCCACCAGAGGGCCCAGCCTTTGGCACAGGTTGGAAACTCTGTGGCCTCTGGCCTGAACTGTACTaGTCAAAAGTAAACTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLPPEGPAFGTGWKLCGLWPELY*SKVNSV Trigger: CACAGAGTTTACTTTTGACCAGTACAGTTCAGGCCA...GAGGCCACAGAGTTTCCAACCTGTGCCAAAGGCTGGGCCCTCTGGTGGCAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS-3UTR CCA 90 bp | CTTGAGGAAGTTTTCGGGAATCCTGTCTACACTAGTCTCTCTTCCCTTTCTCCTGATGACGATGCGTTCTaGCCCGGCCTCCTCTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LEEVFGNPVYTSLSSLSPDDDAF*PGLLLQ Trigger: CTGCAAGAGGAGGCCGGGCCAGAACGCATCGTCATC...AGGAGAAAGGGAAGAGAGACTAGTGTAGACAGGATTCCCGAAAACTTCCTCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS-3UTR CCA 90 bp | CTTGAGGAAGTTTTCGGGAATCCTGTCTACACTAGTCTCTCTTCCCTTTCTCCTACGGTAGTGCTGTTCTaGCCTGCTGGCACCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: LEEVFGNPVYTSLSSLSPTVVLF*PAGTST Trigger: CGTGGAGGTGCCAGCAGGCCAGAACAGCACTACCGT...AGGAGAAAGGGAAGAGAGACTAGTGTAGACAGGATTCCCGAAAACTTCCTCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| 3UTR CAA 72 bp | TCAGCCTCCCAGCATACCTCCCTATCTTTCCTTTCCTaGAGGAAGTTTTCGGGAATCCTGTCTACACTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SASQHTSLSFLS*RKFSGILSTLV Trigger: GACTAGTGTAGACAGGATTCCCGAAAACTTCCTCAAGGAAAGGAAAGATAGGGAGGTATGCTGGGAGGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| 3UTR CAA 72 bp | ACTGCAGGCACAGTTTATGTCTGTCTGACTGTATTGTaGTTAGAGTCCGGGTCATTAGTGGGGAAGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TAGTVYVCLTVL*LESGSLVGKRW Trigger: CCATCTCTTCCCCACTAATGACCCGGACTCTAACAACAATACAGTCAGACAGACATAAACTGTGCCTGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| 3UTR CAA 72 bp | GAGACTGCAGGCACAGTTTATGTCTGTCTGACTGTATaGTTGTTAGAGTCCGGGTCATTAGTGGGGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ETAGTVYVCLTV*LLESGSLVGKR Trigger: TCTCTTCCCCACTAATGACCCGGACTCTAACAACAATACAGTCAGACAGACATAAACTGTGCCTGCAGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS GCA 90 bp | CCAAGCGCGGGGGCCCAGCTTACGCGGAGGCTGCGCGGCCTCGCATaGGAGATGACGATGCGTTCTGGCCCGGCCTCCTCTTGCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PSAGAQLTRRLRGLA*EMTMRSGPASSCSV Trigger: CACACTGCAAGAGGAGGCCGGGCCAGAACGCATCGTCATCTCGCATGCGAGGCCGCGCAGCCTCCGCGTAAGCTGGGCCCCCGCGCTTGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS TCA 90 bp | CGGGGGCCCAGCTTACGCGGAGGCTGCGCGGCCTCGCATGCGAGATaGCGATGCGTTCTGGCCCGGCCTCCTCTTGCAGTGTGCGTACTC | + |
|
Preference number: 5 (lower is better) Translates to: RGPSLRGGCAASHAR*RCVLARPPLAVCVL Trigger: GAGTACGCACACTGCAAGAGGAGGCCGGGCCAGAACGCATCGTCATCTCGCATGCGAGGCCGCGCAGCCTCCGCGTAAGCTGGGCCCCCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS CCA 90 bp | TACGCGGAGGCTGCGCGGCCTCGCATGCGAGATGACGATGCGTTCTaGCCCGGCCTCCTCTTGCAGTGTGCGTACTCGCACGTGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: YAEAARPRMRDDDAF*PGLLLQCAYSHVLR Trigger: CCGCAGCACGTGCGAGTACGCACACTGCAAGAGGAGGCCGGGCCAGAACGCATCGTCATCTCGCATGCGAGGCCGCGCAGCCTCCGCGTA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS GCA 90 bp | CGTTCTGGCCCGGCCTCCTCTTGCAGTGTGCGTACTCGCACGTGCTaGGGCCTCAGGAGGTGCACGTTGGACTCAGGCAGCAGTGATACT | + |
|
Preference number: 5 (lower is better) Translates to: RSGPASSCSVRTRTC*GLRRCTLDSGSSDT Trigger: AGTATCACTGCTGCCTGAGTCCAACGTGCACCTCCTGAGGCCGCAGCACGTGCGAGTACGCACACTGCAAGAGGAGGCCGGGCCAGAACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS GCA 90 bp | ATGCGTTCTGGCCCGGCCTCCTCTTGCAGTGTGCGTACTCGCACGTaGTGCGGCCTCAGGAGGTGCACGTTGGACTCAGGCAGCAGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: MRSGPASSCSVRTRT*CGLRRCTLDSGSSD Trigger: ATCACTGCTGCCTGAGTCCAACGTGCACCTCCTGAGGCCGCAGCACGTGCGAGTACGCACACTGCAAGAGGAGGCCGGGCCAGAACGCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS CCA 90 bp | TGTGACACGCTGGCTGAGCTGTCCAACAGGAACAACAGGTCCCCCTaGGGGTCTGATGCTGTGGAACCGCGCTCTATGCTGCTCCGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: CDTLAELSNRNNRSP*GSDAVEPRSMLLRA Trigger: GGCGCGGAGCAGCATAGAGCGCGGTTCCACAGCATCAGACCCCCAGGGGGACCTGTTGTTCCTGTTGGACAGCTCAGCCAGCGTGTCACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS-3UTR CAA 90 bp | CCCACCAACACAACACGTTCGGTGCATGGCCAGTGCTCCTTTGGGTGTCCAGGAACCCACACCAGCACCTaGGGAACCCCTGGCCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PTNTTRSVHGQCSFGCPGTHTST*GTPGRA Trigger: TGCCCGGCCAGGGGTTCCCAAGGTGCTGGTGTGGGT...TCCTGGACACCCAAAGGAGCACTGGCCATGCACCGAACGTGTTGTGTTGGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS CCA 90 bp | AGCTGTCCAACAGGAACAACAGGTCCCCCTGGGGGTCTGATGCTGTaGAACCGCGCTCTATGCTGCTCCGCGCCAATGCCAACCGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SCPTGTTGPPGGLML*NRALCCSAPMPTAD Trigger: GTCTGCGGTTGGCATTGGCGCGGAGCAGCATAGAGCGCGGTTCCACAGCATCAGACCCCCAGGGGGACCTGTTGTTCCTGTTGGACAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS CCA 90 bp | CCACGGGGTCGCTGGAGCCACCATCTGTCACCCACACCAGCACCTTaGGAACCCCTGGCCGGGCACCTGCTTCCTCAGCAAACAATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PRGRWSHHLSPTPAP*EPLAGHLLPQQTIV Trigger: AACAATTGTTTGCTGAGGAAGCAGGTGCCCGGCCAGGGGTTCCCAAGGTGCTGGTGTGGGTGACAGATGGTGGCTCCAGCGACCCCGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS CCA 90 bp | GCAGTGTGCGTACTCGCACGTGCTGCGGCCTCAGGAGGTGCACGTTaGACTCAGGCAGCAGTGATACTTCATAGTCTGTGTCCGGGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: AVCVLARAAASGGAR*TQAAVILHSLCPGR Trigger: TCGACCCGGACACAGACTATGAAGTATCACTGCTGCCTGAGTCCAACGTGCACCTCCTGAGGCCGCAGCACGTGCGAGTACGCACACTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS TCA 90 bp | CACGTGCTGCGGCCTCAGGAGGTGCACGTTGGACTCAGGCAGCAGTaGTACTTCATAGTCTGTGTCCGGGTCGAGATCTGTCCAGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HVLRPQEVHVGLRQQ*YFIVCVRVEICPGP Trigger: TGGACCTGGACAGATCTCGACCCGGACACAGACTATGAAGTATCACTGCTGCCTGAGTCCAACGTGCACCTCCTGAGGCCGCAGCACGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS CCA 90 bp | GCTGGAGCCACCATCTGTCACCCACACCAGCACCTTGGGAACCCCTaGCCGGGCACCTGCTTCCTCAGCAAACAATTGTTCTTTGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: AGATICHPHQHLGNP*PGTCFLSKQLFFGI Trigger: TATGCCAAAGAACAATTGTTTGCTGAGGAAGCAGGTGCCCGGCCAGGGGTTCCCAAGGTGCTGGTGTGGGTGACAGATGGTGGCTCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS TCA 90 bp | TGTATAGCCTGGCCTGAACTGTACTGGTCAAAAGTAAACTCTGTGTaGGGCTGGCTGCCCACGTGCACCAGACTAGCACGCAGAGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CIAWPELYWSKVNSV*GWLPTCTRLARRAP Trigger: CGGGGCTCTGCGTGCTAGTCTGGTGCACGTGGGCAGCCAGCCTCACACAGAGTTTACTTTTGACCAGTACAGTTCAGGCCAGGCTATACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
||
| CDS GCA 90 bp | ATCTGTCACCCACACCAGCACCTTGGGAACCCCTGGCCGGGCACCTaGTTCCTCAGCAAACAATTGTTCTTTGGCATAAGCCAGTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ICHPHQHLGNPWPGT*FLSKQLFFGISQCQ Trigger: CTGGCACTGGCTTATGCCAAAGAACAATTGTTTGCTGAGGAAGCAGGTGCCCGGCCAGGGGTTCCCAAGGTGCTGGTGTGGGTGACAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS GCA 90 bp | TCCCGGGCAATGATAGGAAGATCATCCACATCCACAAAGTGTAGGTaGTTCTCGGCAGGAGCCGAGGCAGCTGCCAACAGCTCCAACAGG | + |
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Preference number: 5 (lower is better) Translates to: SRAMIGRSSTSTKCR*FSAGAEAAANSSNR Trigger: CCTGTTGGAGCTGTTGGCAGCTGCCTCGGCTCCTGCCGAGAAGCACCTACACTTTGTGGATGTGGATGATCTTCCTATCATTGCCCGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS GCA 90 bp | GGTCCAGCTGGTAGCATTCCCGGGCAGCTGTTGGCGTCTTGTGGTTaGCAGTTTGCCGCTAGGTACCAATTCCAGCACGTAGTAACCAGA | + |
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Preference number: 5 (lower is better) Translates to: GPAGSIPGQLLASCG*QFAARYQFQHVVTR Trigger: TCTGGTTACTACGTGCTGGAATTGGTACCTAGCGGCAAACTGGCAACCACAAGACGCCAACAGCTGCCCGGGAATGCTACCAGCTGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS CCA 90 bp | GAACCCCTGGCCGGGCACCTGCTTCCTCAGCAAACAATTGTTCTTTaGCATAAGCCAGTGCCAGGCCTGTGTTGGTATCACCCATACGTT | + |
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Preference number: 5 (lower is better) Translates to: EPLAGHLLPQQTIVL*HKPVPGLCWYHPYV Trigger: AACGTATGGGTGATACCAACACAGGCCTGGCACTGGCTTATGCCAAAGAACAATTGTTTGCTGAGGAAGCAGGTGCCCGGCCAGGGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS TCA 90 bp | CATACGTTGGGGTGCAACACGGATGGCATCCTGTATAGCCTGGCCTaGACTGTACTGGTCAAAAGTAAACTCTGTGTGAGGCTGGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: HTLGCNTDGILYSLA*TVLVKSKLCVRLAA Trigger: GGCAGCCAGCCTCACACAGAGTTTACTTTTGACCAGTACAGTTCAGGCCAGGCTATACAGGATGCCATCCGTGTTGCACCCCAACGTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS-3UTR CAA 90 bp | GACCTGGATGGTCCTGAACGCCTCCTCAAAGCCATGCGTAGTCCCTGCCACCAGTTCCTCAGCAAACAATaGTTCTTTGGCATAAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: DLDGPERLLKAMRSPCHQFLSKQ*FFGISQ Trigger: CTGGCTTATGCCAAAGAACAATTGTTTGCTGAGGAA...CTGGTGGCAGGGACTACGCATGGCTTTGAGGAGGCGTTCAGGACCATCCAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS-3UTR CAA 90 bp | AGATGGAGTAAGCTTGGGATAAGGCAAATGATTCTGAGAGGAGAGGAGAGGCCTAGTGCCAGGCCTGTGTaGGTATCACCCATACGTTGG | + |
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Preference number: 5 (lower is better) Translates to: RWSKLGIRQMILRGEERPSARPV*VSPIRW Trigger: CCAACGTATGGGTGATACCAACACAGGCCTGGCACT...AGGCCTCTCCTCTCCTCTCAGAATCATTTGCCTTATCCCAAGCTTACTCCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS GCA 72 bp | GGGGCCCAGCTTACGCGGAGGCTGCGCGGCCTCGCATaGGAGATGACGATGCGTTCTGGCCCGGCCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GAQLTRRLRGLA*EMTMRSGPASS Trigger: AGAGGAGGCCGGGCCAGAACGCATCGTCATCTCGCATGCGAGGCCGCGCAGCCTCCGCGTAAGCTGGGCCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS GCA 72 bp | GGCCCGGCCTCCTCTTGCAGTGTGCGTACTCGCACGTaGTGCGGCCTCAGGAGGTGCACGTTGGACTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: GPASSCSVRTRT*CGLRRCTLDSG Trigger: GCCTGAGTCCAACGTGCACCTCCTGAGGCCGCAGCACGTGCGAGTACGCACACTGCAAGAGGAGGCCGGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS CAA 90 bp | CGGCCTCGCATGCGAGATGACGATGCGTTCTGGCCCGGCCTCCTCTaGCAGTGTGCGTACTCGCACGTGCTGCGGCCTCAGGAGGTGCAC | + |
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Preference number: 6 (lower is better) Translates to: RPRMRDDDAFWPGLL*QCAYSHVLRPQEVH Trigger: GTGCACCTCCTGAGGCCGCAGCACGTGCGAGTACGCACACTGCAAGAGGAGGCCGGGCCAGAACGCATCGTCATCTCGCATGCGAGGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS TCA 72 bp | AGCTTACGCGGAGGCTGCGCGGCCTCGCATGCGAGATaGCGATGCGTTCTGGCCCGGCCTCCTCTTGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: SLRGGCAASHAR*RCVLARPPLAV Trigger: CACTGCAAGAGGAGGCCGGGCCAGAACGCATCGTCATCTCGCATGCGAGGCCGCGCAGCCTCCGCGTAAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS GCA 72 bp | CCGGCCTCCTCTTGCAGTGTGCGTACTCGCACGTGCTaGGGCCTCAGGAGGTGCACGTTGGACTCAGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PASSCSVRTRTC*GLRRCTLDSGS Trigger: GCTGCCTGAGTCCAACGTGCACCTCCTGAGGCCGCAGCACGTGCGAGTACGCACACTGCAAGAGGAGGCCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS CCA 72 bp | GCTGCGCGGCCTCGCATGCGAGATGACGATGCGTTCTaGCCCGGCCTCCTCTTGCAGTGTGCGTACTCGCAC | + |
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Preference number: 6 (lower is better) Translates to: AARPRMRDDDAF*PGLLLQCAYSH Trigger: GTGCGAGTACGCACACTGCAAGAGGAGGCCGGGCCAGAACGCATCGTCATCTCGCATGCGAGGCCGCGCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS GCA 72 bp | TGCGAGATGACGATGCGTTCTGGCCCGGCCTCCTCTTaGAGTGTGCGTACTCGCACGTGCTGCGGCCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: CEMTMRSGPASS*SVRTRTCCGLR Trigger: CCTGAGGCCGCAGCACGTGCGAGTACGCACACTGCAAGAGGAGGCCGGGCCAGAACGCATCGTCATCTCGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS GCA 72 bp | CCCCCTGGGGGTCTGATGCTGTGGAACCGCGCTCTATaGTGCTCCGCGCCAATGCCAACCGCAGACTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: PPGGLMLWNRAL*CSAPMPTADSK Trigger: CTTTGAGTCTGCGGTTGGCATTGGCGCGGAGCAGCATAGAGCGCGGTTCCACAGCATCAGACCCCCAGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS CAA 72 bp | ATGCGAGATGACGATGCGTTCTGGCCCGGCCTCCTCTaGCAGTGTGCGTACTCGCACGTGCTGCGGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: MRDDDAFWPGLL*QCAYSHVLRPQ Trigger: CTGAGGCCGCAGCACGTGCGAGTACGCACACTGCAAGAGGAGGCCGGGCCAGAACGCATCGTCATCTCGCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS CAA 90 bp | CCCACGGGGTCGCTGGAGCCACCATCTGTCACCCACACCAGCACCTaGGGAACCCCTGGCCGGGCACCTGCTTCCTCAGCAAACAATTGT | + |
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Preference number: 6 (lower is better) Translates to: PTGSLEPPSVTHTST*GTPGRAPASSANNC Trigger: ACAATTGTTTGCTGAGGAAGCAGGTGCCCGGCCAGGGGTTCCCAAGGTGCTGGTGTGGGTGACAGATGGTGGCTCCAGCGACCCCGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS GCA 72 bp | CCTGGGGGTCTGATGCTGTGGAACCGCGCTCTATGCTaGTCCGCGCCAATGCCAACCGCAGACTCAAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: PGGLMLWNRALC*SAPMPTADSKP Trigger: TGGCTTTGAGTCTGCGGTTGGCATTGGCGCGGAGCAGCATAGAGCGCGGTTCCACAGCATCAGACCCCCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS CCA 72 bp | ACAGGAACAACAGGTCCCCCTGGGGGTCTGATGCTGTaGAACCGCGCTCTATGCTGCTCCGCGCCAATGCCA | + |
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Preference number: 6 (lower is better) Translates to: TGTTGPPGGLML*NRALCCSAPMP Trigger: TGGCATTGGCGCGGAGCAGCATAGAGCGCGGTTCCACAGCATCAGACCCCCAGGGGGACCTGTTGTTCCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS CAA 90 bp | TGCTTCTCGGCAGGAGCCGAGGCAGCTGCCAACAGCTCCAACAGGTaGCCTCGGCCAGTGCTGACAATGAAGATGGTGACACCCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: CFSAGAEAAANSSNR*PRPVLTMKMVTPRS Trigger: GGACCTGGGTGTCACCATCTTCATTGTCAGCACTGGCCGAGGCAACCTGTTGGAGCTGTTGGCAGCTGCCTCGGCTCCTGCCGAGAAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS CCA 72 bp | CTGGCTGAGCTGTCCAACAGGAACAACAGGTCCCCCTaGGGGTCTGATGCTGTGGAACCGCGCTCTATGCTG | + |
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Preference number: 6 (lower is better) Translates to: LAELSNRNNRSP*GSDAVEPRSML Trigger: CAGCATAGAGCGCGGTTCCACAGCATCAGACCCCCAGGGGGACCTGTTGTTCCTGTTGGACAGCTCAGCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS CCA 72 bp | GTCCAGGTCCAGCTGGTAGCATTCCCGGGCAGCTGTTaGCGTCTTGTGGTTGCCAGTTTGCCGCTAGGTACC | + |
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Preference number: 6 (lower is better) Translates to: VQVQLVAFPGSC*RLVVASLPLGT Trigger: GGTACCTAGCGGCAAACTGGCAACCACAAGACGCCAACAGCTGCCCGGGAATGCTACCAGCTGGACCTGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS GCA 72 bp | TGCTGTGGAACCGCGCTCTATGCTGCTCCGCGCCAATaGCAACCGCAGACTCAAAGCCATGCTGAACGCAGT | + |
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Preference number: 6 (lower is better) Translates to: CCGTALYAAPRQ*QPQTQSHAERS Trigger: ACTGCGTTCAGCATGGCTTTGAGTCTGCGGTTGGCATTGGCGCGGAGCAGCATAGAGCGCGGTTCCACAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS CCA 72 bp | GCCACTGGACAGAACCTCCGAGGCATGAAGCTGTTGTaGCTGCATCGCATCAGTTATGGAGCCCCGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: ATGQNLRGMKLL*LHRISYGAPQL Trigger: GAGCTGCGGGGCTCCATAACTGATGCGATGCAGCCACAACAGCTTCATGCCTCGGAGGTTCTGTCCAGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS CAA 72 bp | GCAGGAGCCGAGGCAGCTGCCAACAGCTCCAACAGGTaGCCTCGGCCAGTGCTGACAATGAAGATGGTGACA | + |
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Preference number: 6 (lower is better) Translates to: AGAEAAANSSNR*PRPVLTMKMVT Trigger: TGTCACCATCTTCATTGTCAGCACTGGCCGAGGCAACCTGTTGGAGCTGTTGGCAGCTGCCTCGGCTCCTGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS CAA 72 bp | TGTCCAGGTCCAGCTGGTAGCATTCCCGGGCAGCTGTaGGCGTCTTGTGGTTGCCAGTTTGCCGCTAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: CPGPAGSIPGQL*ASCGCQFAARY Trigger: GTACCTAGCGGCAAACTGGCAACCACAAGACGCCAACAGCTGCCCGGGAATGCTACCAGCTGGACCTGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS CCA 72 bp | GCCAGTGCCAGGCCTGTGTTGGTATCACCCATACGTTaGGGTGCAACACGGATGGCATCCTGTATAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: ASARPVLVSPIR*GATRMASCIAW Trigger: CCAGGCTATACAGGATGCCATCCGTGTTGCACCCCAACGTATGGGTGATACCAACACAGGCCTGGCACTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS CCA 72 bp | ACCATCTGTCACCCACACCAGCACCTTGGGAACCCCTaGCCGGGCACCTGCTTCCTCAGCAAACAATTGTTC | + |
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Preference number: 6 (lower is better) Translates to: TICHPHQHLGNP*PGTCFLSKQLF Trigger: GAACAATTGTTTGCTGAGGAAGCAGGTGCCCGGCCAGGGGTTCCCAAGGTGCTGGTGTGGGTGACAGATGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS CAA 72 bp | GAAGCCACTGGACAGAACCTCCGAGGCATGAAGCTGTaGTGGCTGCATCGCATCAGTTATGGAGCCCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: EATGQNLRGMKL*WLHRISYGAPQ Trigger: CTGCGGGGCTCCATAACTGATGCGATGCAGCCACAACAGCTTCATGCCTCGGAGGTTCTGTCCAGTGGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS CAA 90 bp | CACCTTGGGAACCCCTGGCCGGGCACCTGCTTCCTCAGCAAACAATaGTTCTTTGGCATAAGCCAGTGCCAGGCCTGTGTTGGTATCACC | + |
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Preference number: 6 (lower is better) Translates to: HLGNPWPGTCFLSKQ*FFGISQCQACVGIT Trigger: GGTGATACCAACACAGGCCTGGCACTGGCTTATGCCAAAGAACAATTGTTTGCTGAGGAAGCAGGTGCCCGGCCAGGGGTTCCCAAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS TCA 72 bp | CGGCCTCAGGAGGTGCACGTTGGACTCAGGCAGCAGTaGTACTTCATAGTCTGTGTCCGGGTCGAGATCTGT | + |
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Preference number: 6 (lower is better) Translates to: RPQEVHVGLRQQ*YFIVCVRVEIC Trigger: ACAGATCTCGACCCGGACACAGACTATGAAGTATCACTGCTGCCTGAGTCCAACGTGCACCTCCTGAGGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS GCA 72 bp | CCACACCAGCACCTTGGGAACCCCTGGCCGGGCACCTaGTTCCTCAGCAAACAATTGTTCTTTGGCATAAGC | + |
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Preference number: 6 (lower is better) Translates to: PHQHLGNPWPGT*FLSKQLFFGIS Trigger: GCTTATGCCAAAGAACAATTGTTTGCTGAGGAAGCAGGTGCCCGGCCAGGGGTTCCCAAGGTGCTGGTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS GCA 72 bp | GGTAGCATTCCCGGGCAGCTGTTGGCGTCTTGTGGTTaGCAGTTTGCCGCTAGGTACCAATTCCAGCACGTA | + |
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Preference number: 6 (lower is better) Translates to: GSIPGQLLASCG*QFAARYQFQHV Trigger: TACGTGCTGGAATTGGTACCTAGCGGCAAACTGGCAACCACAAGACGCCAACAGCTGCCCGGGAATGCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS CCA 72 bp | GTACTCGCACGTGCTGCGGCCTCAGGAGGTGCACGTTaGACTCAGGCAGCAGTGATACTTCATAGTCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: VLARAAASGGAR*TQAAVILHSLC Trigger: ACACAGACTATGAAGTATCACTGCTGCCTGAGTCCAACGTGCACCTCCTGAGGCCGCAGCACGTGCGAGTAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS CAA 72 bp | AGCCAGTGCCAGGCCTGTGTTGGTATCACCCATACGTaGGGGTGCAACACGGATGGCATCCTGTATAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SQCQACVGITHT*GCNTDGILYSL Trigger: CAGGCTATACAGGATGCCATCCGTGTTGCACCCCAACGTATGGGTGATACCAACACAGGCCTGGCACTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS TCA 72 bp | TGGCCTGAACTGTACTGGTCAAAAGTAAACTCTGTGTaGGGCTGGCTGCCCACGTGCACCAGACTAGCACGC | + |
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Preference number: 6 (lower is better) Translates to: WPELYWSKVNSV*GWLPTCTRLAR Trigger: GCGTGCTAGTCTGGTGCACGTGGGCAGCCAGCCTCACACAGAGTTTACTTTTGACCAGTACAGTTCAGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS CAA 72 bp | AACCCCTGGCCGGGCACCTGCTTCCTCAGCAAACAATaGTTCTTTGGCATAAGCCAGTGCCAGGCCTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: NPWPGTCFLSKQ*FFGISQCQACV Trigger: AACACAGGCCTGGCACTGGCTTATGCCAAAGAACAATTGTTTGCTGAGGAAGCAGGTGCCCGGCCAGGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS CCA 72 bp | GCCGGGCACCTGCTTCCTCAGCAAACAATTGTTCTTTaGCATAAGCCAGTGCCAGGCCTGTGTTGGTATCAC | + |
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Preference number: 6 (lower is better) Translates to: AGHLLPQQTIVL*HKPVPGLCWYH Trigger: GTGATACCAACACAGGCCTGGCACTGGCTTATGCCAAAGAACAATTGTTTGCTGAGGAAGCAGGTGCCCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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| CDS CCA 72 bp | ATTCCCGAACTCTTGAGAACTCATAGTGTGACACGCTaGCTGAGCTGTCCAACAGGAACAACAGGTCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: IPELLRTHSVTR*LSCPTGTTGPP Trigger: AGGGGGACCTGTTGTTCCTGTTGGACAGCTCAGCCAGCGTGTCACACTATGAGTTCTCAAGAGTTCGGGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042196.4 |
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