Pregenerated sensors for VTI1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024983Ensembl transcript IDs: ENSMUST00000095950.3, ENSMUST00000223690.2, ENSMUST00000225529.2
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGAAAGAGAATCGCAAATGGCCCCGCAGCCCAGGCCTGCCCGCTaGCGTCAGGCGCGCTGCATCTGCAGGCATCCGCCTTCAACACGG | + |
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Preference number: 1 (lower is better) Translates to: PERESQMAPQPRPAR*RQARCICRHPPSTR Trigger: CCGTGTTGAAGGCGGATGCCTGCAGATGCAGCGCGCCTGACGTCAGCGGGCAGGCCTGGGCTGCGGGGCCATTTGCGATTCTCTTTCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
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| 3UTR CCA 90 bp | CACACAGAGACACCTGCTTCAGAGCTGTGTGCTTTCTCCCTTCCGTaGTGGGTAGGGAGGTGGGAAAGGTATCGCCCTGGCCTAGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: HTETPASELCAFSLP*WVGRWERYRPGLGL Trigger: GAGCCCTAGGCCAGGGCGATACCTTTCCCACCTCCCTACCCACCACGGAAGGGAGAAAGCACACAGCTCTGAAGCAGGTGTCTCTGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR TCA 90 bp | CAGCAAGAGCCAGTGCTTCACCTGTTAGGTGGTCTTGGGAAGATGTaGCTTGGGAGGACGGAGGGAGGTGGGAGAGACGGCTCAGGACTC | + |
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Preference number: 1 (lower is better) Translates to: QQEPVLHLLGGLGKM*LGRTEGGGRDGSGL Trigger: GAGTCCTGAGCCGTCTCTCCCACCTCCCTCCGTCCTCCCAAGTCACATCTTCCCAAGACCACCTAACAGGTGAAGCACTGGCTCTTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR CCA 90 bp | AGAGCCAGTGCTTCACCTGTTAGGTGGTCTTGGGAAGATGTGACTTaGGAGGACGGAGGGAGGTGGGAGAGACGGCTCAGGACTCAGGTC | + |
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Preference number: 1 (lower is better) Translates to: RASASPVRWSWEDVT*EDGGRWERRLRTQV Trigger: GACCTGAGTCCTGAGCCGTCTCTCCCACCTCCCTCCGTCCTCCCAAGTCACATCTTCCCAAGACCACCTAACAGGTGAAGCACTGGCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR CCA 90 bp | GCTTCAGAGCTGTGTGCTTTCTCCCTTCCGTGGTGGGTAGGGAGGTaGGAAAGGTATCGCCCTGGCCTAGGGCTCTTCCTTGTTCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: ASELCAFSLPWWVGR*ERYRPGLGLFLVLP Trigger: GGGAAGAACAAGGAAGAGCCCTAGGCCAGGGCGATACCTTTCCCACCTCCCTACCCACCACGGAAGGGAGAAAGCACACAGCTCTGAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR CCA 90 bp | TTTCTCCCTTCCGTGGTGGGTAGGGAGGTGGGAAAGGTATCGCCCTaGCCTAGGGCTCTTCCTTGTTCTTCCCATGACATCAGGAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: FLPSVVGREVGKVSP*PRALPCSSHDIRRP Trigger: TGGCCTCCTGATGTCATGGGAAGAACAAGGAAGAGCCCTAGGCCAGGGCGATACCTTTCCCACCTCCCTACCCACCACGGAAGGGAGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR GCA 90 bp | CTTTCGCTGACAGGAAAGGTGGCGCAGCTTCCAGCCTGTCTCCTCTaGTGTCCTACTTTGTTCAGCCCAAACCCCACGCCATCCTTCCAA | + |
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Preference number: 1 (lower is better) Translates to: LSLTGKVAQLPACLL*CPTLFSPNPTPSFQ Trigger: TTGGAAGGATGGCGTGGGGTTTGGGCTGAACAAAGTAGGACAGCAGAGGAGACAGGCTGGAAGCTGCGCCACCTTTCCTGTCAGCGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR CCA 90 bp | GAGACAGTAAATCTGCCCCTTGGCAATGAAGTTGCACAGGCAGGATaGCCAAGCTCATTGTGCTGGGAAAGGGCTAGGCTGGCCTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: ETVNLPLGNEVAQAG*PSSLCWERARLAWS Trigger: GCTCCAGGCCAGCCTAGCCCTTTCCCAGCACAATGAGCTTGGCCATCCTGCCTGTGCAACTTCATTGCCAAGGGGCAGATTTACTGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR TCA 90 bp | TGGCCAAGCTCATTGTGCTGGGAAAGGGCTAGGCTGGCCTGGAGCTaGTCTCTGGCCTCTGATTTTTCTGGCATTTTGTCCATGGACAGC | + |
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Preference number: 1 (lower is better) Translates to: WPSSLCWERARLAWS*SLASDFSGILSMDS Trigger: GCTGTCCATGGACAAAATGCCAGAAAAATCAGAGGCCAGAGATCAGCTCCAGGCCAGCCTAGCCCTTTCCCAGCACAATGAGCTTGGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR TCA 90 bp | CTGGCGATAGCAAGGAAAGCACCAAGCAGAGAGAGTCATGAAAGGTaGGTGGCAGGTGCCTCCCTTCCTTCTTCTCATTTCATCGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: LAIARKAPSRESHER*VAGASLPSSHFIGF Trigger: GAAGCCGATGAAATGAGAAGAAGGAAGGGAGGCACCTGCCACTCACCTTTCATGACTCTCTCTGCTTGGTGCTTTCCTTGCTATCGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR CCA 90 bp | TCTTGGGTAGCTGTCTGCAGTTCCTCATTCTTTGAAAGAGGTCAGTaGGCCCCCACAGAGGGTCTCTGTTTGCTTGCTTGCTTGTTTGTG | + |
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Preference number: 1 (lower is better) Translates to: SWVAVCSSSFFERGQ*APTEGLCLLACLFV Trigger: CACAAACAAGCAAGCAAGCAAACAGAGACCCTCTGTGGGGGCCCACTGACCTCTTTCAAAGAATGAGGAACTGCAGACAGCTACCCAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR GCA 90 bp | CTTGTTTGTGTTTTCCTAGTGGTCCCGCCCATTTTATTCCCACATTaGACACGTCACAGGAGCAAACCCTGCTCAGGCTCTCTTTCCGTA | + |
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Preference number: 1 (lower is better) Translates to: LVCVFLVVPPILFPH*TRHRSKPCSGSLSV Trigger: TACGGAAAGAGAGCCTGAGCAGGGTTTGCTCCTGTGACGTGTGCAATGTGGGAATAAAATGGGCGGGACCACTAGGAAAACACAAACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR TCA 90 bp | TCCTCCCAAGGAATGTCTGTTCTTCTGGGCTCAACGTCTTTCCAGTaGGTCCTTGTTTATGCAGAAGCTAGAAGGCCCAAACAGAAAGCC | + |
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Preference number: 1 (lower is better) Translates to: SSQGMSVLLGSTSFQ*VLVYAEARRPKQKA Trigger: GGCTTTCTGTTTGGGCCTTCTAGCTTCTGCATAAACAAGGACTCACTGGAAAGACGTTGAGCCCAGAAGAACAGACATTCCTTGGGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225529.2 |
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| 3UTR TCA 90 bp | AAGTTATTTCTCTGGACAAGAGACAGTAAATCTGCCCCTTGGCAATaGAGTTGCACAGGCAGGATGGCCAAGCTCATTGTGCTGGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: KLFLWTRDSKSAPWQ*SCTGRMAKLIVLGK Trigger: CTTTCCCAGCACAATGAGCTTGGCCATCCTGCCTGTGCAACTTCATTGCCAAGGGGCAGATTTACTGTCTCTTGTCCAGAGAAATAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR GCA 90 bp | TTCACACTTGACCCTGGAATGATGCCTGGAAGCTCTCTGATGGTTTaGTTTGCTCTGACTTCAAGGGTTTCGTCCTGGGAGAGTTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: FTLDPGMMPGSSLMV*FALTSRVSSWESFL Trigger: AAGAAAACTCTCCCAGGACGAAACCCTTGAAGTCAGAGCAAAGCAAACCATCAGAGAGCTTCCAGGCATCATTCCAGGGTCAAGTGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225529.2 |
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| 3UTR CCA 90 bp | GAGGCAGGCTTTGCTAAACGGCTGTCTCTAAAAATGAGTGGTTCTTaGGTAGCTGTCTGCAGTTCCTCATTCTTTGAAAGAGGTCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: EAGFAKRLSLKMSGS*VAVCSSSFFERGQW Trigger: CCACTGACCTCTTTCAAAGAATGAGGAACTGCAGACAGCTACCCAAGAACCACTCATTTTTAGAGACAGCCGTTTAGCAAAGCCTGCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR GCA 90 bp | CTTTCCCTCCCTCCTCCCTTCTTCCACGAGTTGGTAATCTCTGGATaGTGTTTGGTAATGAAAACCCAATCACGGAGGTCATTATCTGAT | + |
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Preference number: 1 (lower is better) Translates to: LSLPPPFFHELVISG*CLVMKTQSRRSLSD Trigger: ATCAGATAATGACCTCCGTGATTGGGTTTTCATTACCAAACAGCATCCAGAGATTACCAACTCGTGGAAGAAGGGAGGAGGGAGGGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
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| 3UTR CCA 90 bp | TTTATTTCTTTACTTAATGATAACCCTCAATGGGCTCGCCCCGCATaGGACGGCCAGAGCCGCACAATTTTGTTCGCCATTAATTTCAGC | + |
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Preference number: 1 (lower is better) Translates to: FISLLNDNPQWARPA*DGQSRTILFAINFS Trigger: GCTGAAATTAATGGCGAACAAAATTGTGCGGCTCTGGCCGTCCCATGCGGGGCGAGCCCATTGAGGGTTATCATTAAGTAAAGAAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
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| 3UTR GCA 90 bp | GATTTCCTTCCCCAGCATCAGCACGGCAGACTGAGGTTGCCTCTTTaGTTTTTAATGGTTTCTTTGATACATTTAGGATGGCCAGAATTC | + |
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Preference number: 1 (lower is better) Translates to: DFLPQHQHGRLRLPL*FLMVSLIHLGWPEF Trigger: GAATTCTGGCCATCCTAAATGTATCAAAGAAACCATTAAAAAGCAAAGAGGCAACCTCAGTCTGCCGTGCTGATGCTGGGGAAGGAAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR TCA 90 bp | CACAAGGCAAGGAAGGATGCTACCAAAGCTATTTTGGACAGCAGATaGAGTTACCTAAAGGCAAGTAAGCATTCACCTTTACCTATAAAA | + |
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Preference number: 1 (lower is better) Translates to: HKARKDATKAILDSR*SYLKASKHSPLPIK Trigger: TTTTATAGGTAAAGGTGAATGCTTACTTGCCTTTAGGTAACTTCATCTGCTGTCCAAAATAGCTTTGGTAGCATCCTTCCTTGCCTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCCGTGGTGGGTAGGGAGGTGGGAAAGGTATCGCCCTGGCCTAGGGCTCTTCCTCCCACAGTTGAGCTaGGCCAACATCACTGGCGAT | + |
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Preference number: 2 (lower is better) Translates to: LPWWVGRWERYRPGLGLFLPQLS*ANITGD Trigger: ATCGCCAGTGATGTTGGCCCAGCTCAACTGTGGGAG...GAAGAGCCCTAGGCCAGGGCGATACCTTTCCCACCTCCCTACCCACCACGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGGGAAAGGTATCGCCCTGGCCTAGGGCTCTTCCTTGTTCTTCCCATGACGGGAAAGGGCTAGGCTaGCCTGGAGCTGATCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: EVGKVSPWPRALPCSSHDGKGLG*PGADLW Trigger: CCAGAGATCAGCTCCAGGCCAGCCTAGCCCTTTCCC...GTCATGGGAAGAACAAGGAAGAGCCCTAGGCCAGGGCGATACCTTTCCCACCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTGTTCTTCCCATGACATCAGGAGGCCAGAGGGCCGACCAGGGACATTCAGAAGGCTGGCCTGGAGCTaGTCTCTGGCCTCTGATTTT | + |
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Preference number: 2 (lower is better) Translates to: PCSSHDIRRPEGRPGTFRRLAWS*SLASDF Trigger: AAAATCAGAGGCCAGAGATCAGCTCCAGGCCAGCCT...TCTGAATGTCCCTGGTCGGCCCTCTGGCCTCCTGATGTCATGGGAAGAACAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCCGTGGTGGGTAGGGAGGTGGGAAAGGTATCGCCCTGGCCTAGGGCTCTTCCTGGCATTTTGTCCATaGACAGCACAGAAGGACTGT | + |
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Preference number: 2 (lower is better) Translates to: LPWWVGRWERYRPGLGLFLAFCP*TAQKDC Trigger: ACAGTCCTTCTGTGCTGTCCATGGACAAAATGCCAG...GAAGAGCCCTAGGCCAGGGCGATACCTTTCCCACCTCCCTACCCACCACGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR-3UTR CCA 90 bp | AACCTTCCACACAGAGACACCTGCTTCAGAGCTGTGTGCTTTCTCCCTTCCGTGGGGAAAGGGCTAGGCTaGCCTGGAGCTGATCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: NLPHRDTCFRAVCFLPSVGKGLG*PGADLW Trigger: CCAGAGATCAGCTCCAGGCCAGCCTAGCCCTTTCCC...CACGGAAGGGAGAAAGCACACAGCTCTGAAGCAGGTGTCTCTGTGTGGAAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCTCCCTTCCGTGGTGGGTAGGGAGGTGGGAAAGGTATCGCCCTGGCCTAGGGGGGAGAATGGCTTTTaGGGAAGGCGAGGGAATATT | + |
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Preference number: 2 (lower is better) Translates to: FLPSVVGREVGKVSPWPRGENGF*GRRGNI Trigger: AATATTCCCTCGCCTTCCCCAAAAGCCATTCTCCCC...CCTAGGCCAGGGCGATACCTTTCCCACCTCCCTACCCACCACGGAAGGGAGAAA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR-3UTR CCA 90 bp | ACGGCCAGAGCCGCACAATTTTGTTCGCCATTAATTTCAGCCTTTGAAGCTCCGGAGGACGGAGGGAGGTaGGAGAGACGGCTCAGGACT | + |
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Preference number: 2 (lower is better) Translates to: TARAAQFCSPLISAFEAPEDGGR*ERRLRT Trigger: AGTCCTGAGCCGTCTCTCCCACCTCCCTCCGTCCTC...CGGAGCTTCAAAGGCTGAAATTAATGGCGAACAAAATTGTGCGGCTCTGGCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCTCCCTTCCGTGGTGGGTAGGGAGGTGGGAAAGGTATCGCCCTGGCCTAGGGTAAGGAGAGGTACATaGCACAAAGAAGCTACTGTG | + |
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Preference number: 2 (lower is better) Translates to: FLPSVVGREVGKVSPWPRVRRGT*HKEATV Trigger: CACAGTAGCTTCTTTGTGTCATGTACCTCTCCTTAC...CCTAGGCCAGGGCGATACCTTTCCCACCTCCCTACCCACCACGGAAGGGAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCTCCCTTCCGTGGTGGGTAGGGAGGTGGGAAAGGTATCGCCCTGGCCTAGGCTGATCTCTGGCCTCTaGTTTTTCTGGCATTTTGTC | + |
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Preference number: 2 (lower is better) Translates to: FLPSVVGREVGKVSPWPRLISGL*FFWHFV Trigger: GACAAAATGCCAGAAAAATCAGAGGCCAGAGATCAG...CCTAGGCCAGGGCGATACCTTTCCCACCTCCCTACCCACCACGGAAGGGAGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR-3UTR TCA 90 bp | GGATGTGAGGGAGCCCTTAGGCCAAGGGCTATAGAGTCACAGATTTCCACTCCCAAGCAGAGAGAGTCATaGAAGGTGAGTGGCAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: GCEGALRPRAIESQISTPKQRES*KVSGRC Trigger: GCACCTGCCACTCACCTTTCATGACTCTCTCTGCTT...GGGAGTGGAAATCTGTGACTCTATAGCCCTTGGCCTAAGGGCTCCCTCACATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR-3UTR GCA 90 bp | GGATGTGAGGGAGCCCTTAGGCCAAGGGCTATAGAGTCACAGATTTCCACTCCCAAGGTGAGTGGCAGGTaGCTCCCTTCCTTCTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: GCEGALRPRAIESQISTPKVSGR*LPSFFS Trigger: TGAGAAGAAGGAAGGGAGGCACCTGCCACTCACCTT...GGGAGTGGAAATCTGTGACTCTATAGCCCTTGGCCTAAGGGCTCCCTCACATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCAACCGTCCCTCTCTGCTTCTTTGTTCCTCCCAAGGAATGTCTGTTCTTCTGTCGAGTCAGGGCCATaGCCTGTGGTGTGGAGACAT | + |
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Preference number: 2 (lower is better) Translates to: GQPSLSASLFLPRNVCSSVESGP*PVVWRH Trigger: ATGTCTCCACACCACAGGGCATGGCCCTGACTCGAC...AGAAGAACAGACATTCCTTGGGAGGAACAAAGAAGCAGAGAGGGACGGTTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225529.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCCGTGGTGGGTAGGGAGGTGGGAAAGGTATCGCCCTGGCCTAGGGCTCTTCAGAAAGGGAAGAAAATaGTGGAGTGTGTTAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: LPWWVGRWERYRPGLGLFRKGRK*WSVLEV Trigger: AACCTCTAACACACTCCATCATTTTCTTCCCTTTCT...GAAGAGCCCTAGGCCAGGGCGATACCTTTCCCACCTCCCTACCCACCACGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCCGTGGTGGGTAGGGAGGTGGGAAAGGTATCGCCCTGGCCTAGGGCTCTTCCTACCAAAGCTATTTTaGACAGCAGATGAAGTTACC | + |
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Preference number: 2 (lower is better) Translates to: LPWWVGRWERYRPGLGLFLPKLF*TADEVT Trigger: GGTAACTTCATCTGCTGTCCAAAATAGCTTTGGTAG...GAAGAGCCCTAGGCCAGGGCGATACCTTTCCCACCTCCCTACCCACCACGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR-3UTR CCA 90 bp | CATTCTTTGAAAGAGGTCAGTGGGCCCCCACAGAGGGTCTCTGTTTGCTTGCTTGCTGCCAGCAAGTTCTaGGGAGAATGGCTTTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: HSLKEVSGPPQRVSVCLLAASKF*GEWLLG Trigger: CCCCAAAAGCCATTCTCCCCAGAACTTGCTGGCAGC...AAGCAAGCAAACAGAGACCCTCTGTGGGGGCCCACTGACCTCTTTCAAAGAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGGGAAAGGTATCGCCCTGGCCTAGGGCTCTTCCTTGTTCTTCCCATGACGCTTCACCTGTTAGGTaGTCTTGGGAAGATGTGACT | + |
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Preference number: 2 (lower is better) Translates to: EVGKVSPWPRALPCSSHDASPVR*SWEDVT Trigger: AGTCACATCTTCCCAAGACCACCTAACAGGTGAAGC...GTCATGGGAAGAACAAGGAAGAGCCCTAGGCCAGGGCGATACCTTTCCCACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR-3UTR CCA 90 bp | AACCTTCCACACAGAGACACCTGCTTCAGAGCTGTGTGCTTTCTCCCTTCCGTGCCTGGAGCTGATCTCTaGCCTCTGATTTTTCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: NLPHRDTCFRAVCFLPSVPGADL*PLIFLA Trigger: TGCCAGAAAAATCAGAGGCCAGAGATCAGCTCCAGG...CACGGAAGGGAGAAAGCACACAGCTCTGAAGCAGGTGTCTCTGTGTGGAAGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR-3UTR CCA 90 bp | AACCGAGGTCTGCATAATAAGAACCTAGAACCTTCCACACAGAGACACCTGCTTTGGTGGGTAGGGAGGTaGGAAAGGTATCGCCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: NRGLHNKNLEPSTQRHLLWWVGR*ERYRPG Trigger: GCCAGGGCGATACCTTTCCCACCTCCCTACCCACCA...AAGCAGGTGTCTCTGTGTGGAAGGTTCTAGGTTCTTATTATGCAGACCTCGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR CAA 90 bp | GCTTGTTTGTGTTTTCCTAGTGGTCCCGCCCATTTTATTCCCACATaGCACACGTCACAGGAGCAAACCCTGCTCAGGCTCTCTTTCCGT | + |
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Preference number: 2 (lower is better) Translates to: ACLCFPSGPAHFIPT*HTSQEQTLLRLSFR Trigger: ACGGAAAGAGAGCCTGAGCAGGGTTTGCTCCTGTGACGTGTGCAATGTGGGAATAAAATGGGCGGGACCACTAGGAAAACACAAACAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR-3UTR TCA 90 bp | ACGGCCAGAGCCGCACAATTTTGTTCGCCATTAATTTCAGCCTTTGAAGCTCCGCAGTTCCTCATTCTTTaGAAGAGGTCAGTGGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: TARAAQFCSPLISAFEAPQFLIL*KRSVGP Trigger: GGGGCCCACTGACCTCTTTCAAAGAATGAGGAACTG...CGGAGCTTCAAAGGCTGAAATTAATGGCGAACAAAATTGTGCGGCTCTGGCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGTGGGAAAGGTATCGCCCTGGCCTAGGGCTCTTCCTTGTTCTTCCCATGACATGATCTTACTCACATaGGCACAGGTGGTTAGCATT | + |
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Preference number: 2 (lower is better) Translates to: EVGKVSPWPRALPCSSHDMILLT*AQVVSI Trigger: AATGCTAACCACCTGTGCTCATGTGAGTAAGATCAT...GTCATGGGAAGAACAAGGAAGAGCCCTAGGCCAGGGCGATACCTTTCCCACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTTGCACAGGCAGGATGGCCAAGCTCATTGTGCTGGGAAAGGGCTAGGCTGGCAAGGCAAGGAAGGATaGTACCAAAGCTATTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: KLHRQDGQAHCAGKGLGWQGKEG*YQSYFG Trigger: TCCAAAATAGCTTTGGTAGCATCCTTCCTTGCCTTG...CCAGCCTAGCCCTTTCCCAGCACAATGAGCTTGGCCATCCTGCCTGTGCAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR-3UTR GCA 90 bp | CATTCTTTGAAAGAGGTCAGTGGGCCCCCACAGAGGGTCTCTGTTTGCTTGCTTGAACCTCTGACCTTTTaGTTATACGAGGGCCGCTGT | + |
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Preference number: 2 (lower is better) Translates to: HSLKEVSGPPQRVSVCLLEPLTF*LYEGRC Trigger: ACAGCGGCCCTCGTATAAGCAAAAGGTCAGAGGTTC...AAGCAAGCAAACAGAGACCCTCTGTGGGGGCCCACTGACCTCTTTCAAAGAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGTGGGAAAGGTATCGCCCTGGCCTAGGGCTCTTCCTTGTTCTTCCCATGACGGGTCTCTGTTTGCTTaGTTGCTTGTTTGTGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: EVGKVSPWPRALPCSSHDGSLFA*LLVCVF Trigger: GAAAACACAAACAAGCAAGCAAGCAAACAGAGACCC...GTCATGGGAAGAACAAGGAAGAGCCCTAGGCCAGGGCGATACCTTTCCCACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CCA 90 bp | AACCTTCCACACAGAGACACCTGCTTCAGAGCTGTGTGCTTTCTCCCTTCCGTGGCTTCACCTGTTAGGTaGTCTTGGGAAGATGTGACT | + |
|
Preference number: 2 (lower is better) Translates to: NLPHRDTCFRAVCFLPSVASPVR*SWEDVT Trigger: AGTCACATCTTCCCAAGACCACCTAACAGGTGAAGC...CACGGAAGGGAGAAAGCACACAGCTCTGAAGCAGGTGTCTCTGTGTGGAAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CCA 90 bp | CACACACTTTTAAACAAAGGCTCCCAGCTTCACAAATGCTCAACAACCGAGGTCTTCTCCCTTCCGTGGTaGGTAGGGAGGTGGGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: HTLLNKGSQLHKCSTTEVFSLPW*VGRWER Trigger: CCTTTCCCACCTCCCTACCCACCACGGAAGGGAGAA...GACCTCGGTTGTTGAGCATTTGTGAAGCTGGGAGCCTTTGTTTAAAAGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR CAA 90 bp | AGATTTCATGACTTCCCGAGAGGCCAACCGTCCCTCTCTGCTTCTTaGTTCCTCCCAAGGAATGTCTGTTCTTCTGGGCTCAACGTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: RFHDFPRGQPSLSAS*FLPRNVCSSGLNVF Trigger: AAAGACGTTGAGCCCAGAAGAACAGACATTCCTTGGGAGGAACAAAGAAGCAGAGAGGGACGGTTGGCCTCTCGGGAAGTCATGAAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225529.2 |
||
| 3UTR-3UTR TCA 90 bp | CACACTTTTAAACAAAGGCTCCCAGCTTCACAAATGCTCAACAACCGAGGTCTGAGGCTGGCCTGGAGCTaGTCTCTGGCCTCTGATTTT | + |
|
Preference number: 2 (lower is better) Translates to: HTFKQRLPASQMLNNRGLRLAWS*SLASDF Trigger: AAAATCAGAGGCCAGAGATCAGCTCCAGGCCAGCCT...CAGACCTCGGTTGTTGAGCATTTGTGAAGCTGGGAGCCTTTGTTTAAAAGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTGATTCTGGAGCAGGGTTGTTTCCGCTTTATTTATGCCGTCAGAGAAACTGTAGCTGTCCCTTTCGCTaGCAGGAAAGGTGGCGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: FDSGAGLFPLYLCRQRNCSCPFR*QERWRS Trigger: GCTGCGCCACCTTTCCTGTCAGCGAAAGGGACAGCT...ACAGTTTCTCTGACGGCATAAATAAAGCGGAAACAACCCTGCTCCAGAATCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR TCA 90 bp | CACACACTTTTAAACAAAGGCTCCCAGCTTCACAAATGCTCAACAACCGAGGTCGAGAGTCATGAAAGGTaGGTGGCAGGTGCCTCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: HTLLNKGSQLHKCSTTEVESHER*VAGASL Trigger: AAGGGAGGCACCTGCCACTCACCTTTCATGACTCTC...GACCTCGGTTGTTGAGCATTTGTGAAGCTGGGAGCCTTTGTTTAAAAGTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR GCA 90 bp | TCAGCCCAAACCCCACGCCATCCTTCCAAAACTGAGACTACACCTTTATTTACATGGCCAAGCTCATTGTaGTGGGAAAGGGCTAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SAQTPRHPSKTETTPLFTWPSSL*WERARL Trigger: CAGCCTAGCCCTTTCCCAGCACAATGAGCTTGGCCA...TGTAAATAAAGGTGTAGTCTCAGTTTTGGAAGGATGGCGTGGGGTTTGGGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR GCA 90 bp | GGATGTGAGGGAGCCCTTAGGCCAAGGGCTATAGAGTCACAGATTTCCACTCCCTCTTGGGTAGCTGTCTaGAGTTCCTCATTCTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: GCEGALRPRAIESQISTPSWVAV*SSSFFE Trigger: TTCAAAGAATGAGGAACTGCAGACAGCTACCCAAGA...GGGAGTGGAAATCTGTGACTCTATAGCCCTTGGCCTAAGGGCTCCCTCACATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTGCACAGGCAGGATGGCCAAGCTCATTGTGCTGGGAAAGGGCTAGGCTGGCTACCAAAGCTATTTTaGACAGCAGATGAAGTTACC | + |
|
Preference number: 2 (lower is better) Translates to: KLHRQDGQAHCAGKGLGWLPKLF*TADEVT Trigger: GGTAACTTCATCTGCTGTCCAAAATAGCTTTGGTAG...CCAGCCTAGCCCTTTCCCAGCACAATGAGCTTGGCCATCCTGCCTGTGCAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTCCCTTCCGTGGTGGGTAGGGAGGTGGGAAAGGTATCGCCCTGGCCTAGGTTGATACATTTAGGATaGCCAGAATTCAGTTATCAG | + |
|
Preference number: 2 (lower is better) Translates to: FLPSVVGREVGKVSPWPRLIHLG*PEFSYQ Trigger: CTGATAACTGAATTCTGGCCATCCTAAATGTATCAA...CCTAGGCCAGGGCGATACCTTTCCCACCTCCCTACCCACCACGGAAGGGAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR TCA 90 bp | AACCGAGGTCTGCATAATAAGAACCTAGAACCTTCCACACAGAGACACCTGCTTCAGTTCCTCATTCTTTaGAAGAGGTCAGTGGGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: NRGLHNKNLEPSTQRHLLQFLIL*KRSVGP Trigger: GGGGCCCACTGACCTCTTTCAAAGAATGAGGAACTG...AAGCAGGTGTCTCTGTGTGGAAGGTTCTAGGTTCTTATTATGCAGACCTCGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR TCA 90 bp | GGATGTGAGGGAGCCCTTAGGCCAAGGGCTATAGAGTCACAGATTTCCACTCCCCCATCCTTCCAAAACTaGGACTACACCTTTATTTAC | + |
|
Preference number: 2 (lower is better) Translates to: GCEGALRPRAIESQISTPPSFQN*DYTFIY Trigger: GTAAATAAAGGTGTAGTCTCAGTTTTGGAAGGATGG...GGGAGTGGAAATCTGTGACTCTATAGCCCTTGGCCTAAGGGCTCCCTCACATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAGATGTGCAAAAGAGAGAGAGACAGAGAGAGAGAGAGAGGGAGAGGGAGAGAGGGGAGAATGGCTTTTaGGGAAGGCGAGGGAATATT | + |
|
Preference number: 2 (lower is better) Translates to: KDVQKRERQRERERERERGENGF*GRRGNI Trigger: AATATTCCCTCGCCTTCCCCAAAAGCCATTCTCCCC...TCTCTCCCTCTCCCTCTCTCTCTCTCTCTGTCTCTCTCTCTTTTGCACATCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| 3UTR-3UTR GCA 90 bp | GGATGTGAGGGAGCCCTTAGGCCAAGGGCTATAGAGTCACAGATTTCCACTCCCACAGGAATAGAAAGATaGTTTTACACTCTCTGCACT | + |
|
Preference number: 2 (lower is better) Translates to: GCEGALRPRAIESQISTPTGIER*FYTLCT Trigger: AGTGCAGAGAGTGTAAAAGCATCTTTCTATTCCTGT...GGGAGTGGAAATCTGTGACTCTATAGCCCTTGGCCTAAGGGCTCCCTCACATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CCA 90 bp | GGATGTGAGGGAGCCCTTAGGCCAAGGGCTATAGAGTCACAGATTTCCACTCCCGCCAAGTTATTTCTCTaGACAAGAGACAGTAAATCT | + |
|
Preference number: 2 (lower is better) Translates to: GCEGALRPRAIESQISTPAKLFL*TRDSKS Trigger: AGATTTACTGTCTCTTGTCCAGAGAAATAACTTGGC...GGGAGTGGAAATCTGTGACTCTATAGCCCTTGGCCTAAGGGCTCCCTCACATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CCA 90 bp | ATTACAACTTCAAATACAGCAGCAGGCAGGCTGTTTTCCTCGGATTTGAAATACTTCTCCCTTCCGTGGTaGGTAGGGAGGTGGGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: ITTSNTAAGRLFSSDLKYFSLPW*VGRWER Trigger: CCTTTCCCACCTCCCTACCCACCACGGAAGGGAGAA...GTATTTCAAATCCGAGGAAAACAGCCTGCCTGCTGCTGTATTTGAAGTTGTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| 3UTR CAA 90 bp | CTCCCTCCTCCCTTCTTCCACGAGTTGGTAATCTCTGGATGCTGTTaGGTAATGAAAACCCAATCACGGAGGTCATTATCTGATGAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: LPPPFFHELVISGCC*VMKTQSRRSLSDEV Trigger: AACCTCATCAGATAATGACCTCCGTGATTGGGTTTTCATTACCAAACAGCATCCAGAGATTACCAACTCGTGGAAGAAGGGAGGAGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAGATGTGCAAAAGAGAGAGAGACAGAGAGAGAGAGAGAGGGAGAGGGAGAGAAGATCAACTGCAGCATaGTCTTACTCACATGAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: KDVQKRERQRERERERERRSTAA*SYSHEH Trigger: GTGCTCATGTGAGTAAGATCATGCTGCAGTTGATCT...TCTCTCCCTCTCCCTCTCTCTCTCTCTCTGTCTCTCTCTCTTTTGCACATCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| 3UTR-3UTR CCA 90 bp | CACACACTTTTAAACAAAGGCTCCCAGCTTCACAAATGCTCAACAACCGAGGTCCTGGCATTTTGTCCATaGACAGCACAGAAGGACTGT | + |
|
Preference number: 2 (lower is better) Translates to: HTLLNKGSQLHKCSTTEVLAFCP*TAQKDC Trigger: ACAGTCCTTCTGTGCTGTCCATGGACAAAATGCCAG...GACCTCGGTTGTTGAGCATTTGTGAAGCTGGGAGCCTTTGTTTAAAAGTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGGTAATGAAAACCCAATCACGGAGGTCATTATCTGATGAGGTTTTTGGAGCAGCTGCCAGCAAGTTCTaGGGAGAATGGCTTTTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: LVMKTQSRRSLSDEVFGAAASKF*GEWLLG Trigger: CCCCAAAAGCCATTCTCCCCAGAACTTGCTGGCAGC...TGCTCCAAAAACCTCATCAGATAATGACCTCCGTGATTGGGTTTTCATTACCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| 3UTR-3UTR TCA 90 bp | CACACTTTTAAACAAAGGCTCCCAGCTTCACAAATGCTCAACAACCGAGGTCTGAGATCAACTGCAGCATaGTCTTACTCACATGAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: HTFKQRLPASQMLNNRGLRSTAA*SYSHEH Trigger: GTGCTCATGTGAGTAAGATCATGCTGCAGTTGATCT...CAGACCTCGGTTGTTGAGCATTTGTGAAGCTGGGAGCCTTTGTTTAAAAGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTACAACTTCAAATACAGCAGCAGGCAGGCTGTTTTCCTCGGATTTGAAATACAAGCAGAGAGAGTCATaGAAGGTGAGTGGCAGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: ITTSNTAAGRLFSSDLKYKQRES*KVSGRC Trigger: GCACCTGCCACTCACCTTTCATGACTCTCTCTGCTT...GTATTTCAAATCCGAGGAAAACAGCCTGCCTGCTGCTGTATTTGAAGTTGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTCTGCTTCTTTGTTCCTCCCAAGGAATGTCTGTTCTTCTGGGCTCAACGTCTTCTGATGGTTTGCTTTaGTCTGACTTCAAGGGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: SLLLCSSQGMSVLLGSTSSDGLL*SDFKGF Trigger: GAAACCCTTGAAGTCAGAGCAAAGCAAACCATCAGA...AGACGTTGAGCCCAGAAGAACAGACATTCCTTGGGAGGAACAAAGAAGCAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225529.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGGTTGTTTCCGCTTTATTTATGCCGTCAGAGAAACTGTTTAGTCTGCATGAGAGGTTTGAATGCGTaGAGAACTGAGGCAGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: AGLFPLYLCRQRNCLVCMRGLNA*RTEAGF Trigger: AAAGCCTGCCTCAGTTCTCCACGCATTCAAACCTCT...CATGCAGACTAAACAGTTTCTCTGACGGCATAAATAAAGCGGAAACAACCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAGATGTGCAAAAGAGAGAGAGACAGAGAGAGAGAGAGAGGGAGAGGGAGAGAATTTTGGACAGCAGATaGAGTTACCTAAAGGCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: KDVQKRERQRERERERERILDSR*SYLKAS Trigger: ACTTGCCTTTAGGTAACTTCATCTGCTGTCCAAAAT...TCTCTCCCTCTCCCTCTCTCTCTCTCTCTGTCTCTCTCTCTTTTGCACATCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGGTAATGAAAACCCAATCACGGAGGTCATTATCTGATGAGGTTTTTGGAGCAACAATCCAGCCAGCCTaGAAGAGAATCGCAAATGGC | + |
|
Preference number: 2 (lower is better) Translates to: LVMKTQSRRSLSDEVFGATIQPA*KRIANG Trigger: GCCATTTGCGATTCTCTTTCAGGCTGGCTGGATTGT...TGCTCCAAAAACCTCATCAGATAATGACCTCCGTGATTGGGTTTTCATTACCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGTTTTCCTAGTGGTCCCGCCCATTTTATTCCCACATTGCACACGTCACAGGGCCAAGTTATTTCTCTaGACAAGAGACAGTAAATCT | + |
|
Preference number: 2 (lower is better) Translates to: CVFLVVPPILFPHCTRHRAKLFL*TRDSKS Trigger: AGATTTACTGTCTCTTGTCCAGAGAAATAACTTGGC...CCTGTGACGTGTGCAATGTGGGAATAAAATGGGCGGGACCACTAGGAAAACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
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| 3UTR-3UTR CCA 90 bp | CACACACTTTTAAACAAAGGCTCCCAGCTTCACAAATGCTCAACAACCGAGGTCGTCTCTAAAAATGAGTaGTTCTTGGGTAGCTGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: HTLLNKGSQLHKCSTTEVVSKNE*FLGSCL Trigger: CAGACAGCTACCCAAGAACCACTCATTTTTAGAGAC...GACCTCGGTTGTTGAGCATTTGTGAAGCTGGGAGCCTTTGTTTAAAAGTGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTATGCTTTACATAGGAGATTTCATGACTTCCCGAGAGGCCAACCGTCCCTCTTCAAGGGTTTCGTCCTaGGAGAGTTTTCTTTCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: TMLYIGDFMTSREANRPSSRVSS*ESFLSF Trigger: AAAAGAAAGAAAACTCTCCCAGGACGAAACCCTTGA...AGAGGGACGGTTGGCCTCTCGGGAAGTCATGAAATCTCCTATGTAAAGCATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225529.2 |
||
| 3UTR-3UTR TCA 90 bp | AACCGAGGTCTGCATAATAAGAACCTAGAACCTTCCACACAGAGACACCTGCTTATTTTGGACAGCAGATaGAGTTACCTAAAGGCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: NRGLHNKNLEPSTQRHLLILDSR*SYLKAS Trigger: ACTTGCCTTTAGGTAACTTCATCTGCTGTCCAAAAT...AAGCAGGTGTCTCTGTGTGGAAGGTTCTAGGTTCTTATTATGCAGACCTCGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR TCA 90 bp | AACCGAGGTCTGCATAATAAGAACCTAGAACCTTCCACACAGAGACACCTGCTTCCATCCTTCCAAAACTaGGACTACACCTTTATTTAC | + |
|
Preference number: 2 (lower is better) Translates to: NRGLHNKNLEPSTQRHLLPSFQN*DYTFIY Trigger: GTAAATAAAGGTGTAGTCTCAGTTTTGGAAGGATGG...AAGCAGGTGTCTCTGTGTGGAAGGTTCTAGGTTCTTATTATGCAGACCTCGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR GCA 90 bp | GCAGGGTTGTTTCCGCTTTATTTATGCCGTCAGAGAAACTGTTTAGTCTGCATGCAAGGCAAGGAAGGATaGTACCAAAGCTATTTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: AGLFPLYLCRQRNCLVCMQGKEG*YQSYFG Trigger: TCCAAAATAGCTTTGGTAGCATCCTTCCTTGCCTTG...CATGCAGACTAAACAGTTTCTCTGACGGCATAAATAAAGCGGAAACAACCCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR GCA 90 bp | ACGGCCAGAGCCGCACAATTTTGTTCGCCATTAATTTCAGCCTTTGAAGCTCCGTTTCCGCTTTATTTATaGCGTCAGAGAAACTGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: TARAAQFCSPLISAFEAPFPLYL*RQRNCL Trigger: TAAACAGTTTCTCTGACGGCATAAATAAAGCGGAAA...CGGAGCTTCAAAGGCTGAAATTAATGGCGAACAAAATTGTGCGGCTCTGGCCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGGTTGTTTCCGCTTTATTTATGCCGTCAGAGAAACTGTTTAGTCTGCATGGTCTCTAAAAATGAGTaGTTCTTGGGTAGCTGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: AGLFPLYLCRQRNCLVCMVSKNE*FLGSCL Trigger: CAGACAGCTACCCAAGAACCACTCATTTTTAGAGAC...CATGCAGACTAAACAGTTTCTCTGACGGCATAAATAAAGCGGAAACAACCCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGGTAATGAAAACCCAATCACGGAGGTCATTATCTGATGAGGTTTTTGGAGCAGTAAGGAGAGGTACATaGCACAAAGAAGCTACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LVMKTQSRRSLSDEVFGAVRRGT*HKEATV Trigger: CACAGTAGCTTCTTTGTGTCATGTACCTCTCCTTAC...TGCTCCAAAAACCTCATCAGATAATGACCTCCGTGATTGGGTTTTCATTACCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGGTAATGAAAACCCAATCACGGAGGTCATTATCTGATGAGGTTTTTGGAGCATCTTGGGTAGCTGTCTaGAGTTCCTCATTCTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LVMKTQSRRSLSDEVFGASWVAV*SSSFFE Trigger: TTCAAAGAATGAGGAACTGCAGACAGCTACCCAAGA...TGCTCCAAAAACCTCATCAGATAATGACCTCCGTGATTGGGTTTTCATTACCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTGATTCTGGAGCAGGGTTGTTTCCGCTTTATTTATGCCGTCAGAGAAACTGTACAGGAATAGAAAGATaGTTTTACACTCTCTGCACT | + |
|
Preference number: 2 (lower is better) Translates to: FDSGAGLFPLYLCRQRNCTGIER*FYTLCT Trigger: AGTGCAGAGAGTGTAAAAGCATCTTTCTATTCCTGT...ACAGTTTCTCTGACGGCATAAATAAAGCGGAAACAACCCTGCTCCAGAATCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGGTAATGAAAACCCAATCACGGAGGTCATTATCTGATGAGGTTTTTGGAGCATTGATACATTTAGGATaGCCAGAATTCAGTTATCAG | + |
|
Preference number: 2 (lower is better) Translates to: LVMKTQSRRSLSDEVFGALIHLG*PEFSYQ Trigger: CTGATAACTGAATTCTGGCCATCCTAAATGTATCAA...TGCTCCAAAAACCTCATCAGATAATGACCTCCGTGATTGGGTTTTCATTACCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| 3UTR TCA 72 bp | GAATCGCAAATGGCCCCGCAGCCCAGGCCTGCCCGCTaGCGTCAGGCGCGCTGCATCTGCAGGCATCCGCCT | + |
|
Preference number: 3 (lower is better) Translates to: ESQMAPQPRPAR*RQARCICRHPP Trigger: AGGCGGATGCCTGCAGATGCAGCGCGCCTGACGTCAGCGGGCAGGCCTGGGCTGCGGGGCCATTTGCGATTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCGTGGTGGGTAGGGAGGTGGGAAAGGTATCGCCCTGGCCTAGGGCTCTTCTTGGGAAGATGTGACTaGGGAGGACGGAGGGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LPWWVGRWERYRPGLGLFLGRCD*GGRREV Trigger: CACCTCCCTCCGTCCTCCCAAGTCACATCTTCCCAA...GAAGAGCCCTAGGCCAGGGCGATACCTTTCCCACCTCCCTACCCACCACGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR CCA 72 bp | GCTGACATGGTGCTGTCGAGTCAGGGCCATGCCCTGTaGTGTGGAGACATGTGTGCTAGGCTCTCCTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: ADMVLSSQGHAL*CGDMCARLSCL Trigger: GAGGCAGGAGAGCCTAGCACACATGTCTCCACACCACAGGGCATGGCCCTGACTCGACAGCACCATGTCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225529.2 |
||
| 3UTR CCA 72 bp | GCTTCACCTGTTAGGTGGTCTTGGGAAGATGTGACTTaGGAGGACGGAGGGAGGTGGGAGAGACGGCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ASPVRWSWEDVT*EDGGRWERRLR Trigger: CCTGAGCCGTCTCTCCCACCTCCCTCCGTCCTCCCAAGTCACATCTTCCCAAGACCACCTAACAGGTGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR CCA 72 bp | CCTGCTTCAGAGCTGTGTGCTTTCTCCCTTCCGTGGTaGGTAGGGAGGTGGGAAAGGTATCGCCCTGGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: PASELCAFSLPW*VGRWERYRPGL Trigger: TAGGCCAGGGCGATACCTTTCCCACCTCCCTACCCACCACGGAAGGGAGAAAGCACACAGCTCTGAAGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR CCA 72 bp | ACACCTGCTTCAGAGCTGTGTGCTTTCTCCCTTCCGTaGTGGGTAGGGAGGTGGGAAAGGTATCGCCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: TPASELCAFSLP*WVGRWERYRPG Trigger: GCCAGGGCGATACCTTTCCCACCTCCCTACCCACCACGGAAGGGAGAAAGCACACAGCTCTGAAGCAGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR CCA 72 bp | CCAGCAAGAGCCAGTGCTTCACCTGTTAGGTGGTCTTaGGAAGATGTGACTTGGGAGGACGGAGGGAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PARASASPVRWS*EDVTWEDGGRW Trigger: CCACCTCCCTCCGTCCTCCCAAGTCACATCTTCCCAAGACCACCTAACAGGTGAAGCACTGGCTCTTGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR CCA 72 bp | TCCGTGGTGGGTAGGGAGGTGGGAAAGGTATCGCCCTaGCCTAGGGCTCTTCCTTGTTCTTCCCATGACATC | + |
|
Preference number: 3 (lower is better) Translates to: SVVGREVGKVSP*PRALPCSSHDI Trigger: GATGTCATGGGAAGAACAAGGAAGAGCCCTAGGCCAGGGCGATACCTTTCCCACCTCCCTACCCACCACGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR TCA 72 bp | GAGGTGGGAGAGACGGCTCAGGACTCAGGTCTGCTCTaGACTATGAACCAGTATTCCCAAAGAGGCCACCGG | + |
|
Preference number: 3 (lower is better) Translates to: EVGETAQDSGLL*TMNQYSQRGHR Trigger: CCGGTGGCCTCTTTGGGAATACTGGTTCATAGTTCAGAGCAGACCTGAGTCCTGAGCCGTCTCTCCCACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTTGTTCTTCCCATGACATCAGGAGGCCAGAGGGCCGACCAGGGACATTCAGAGCAGTTCCTCATTCTTaGAAAGAGGTCAGTGGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: PCSSHDIRRPEGRPGTFRAVPHS*KEVSGP Trigger: GGGCCCACTGACCTCTTTCAAAGAATGAGGAACTGC...TCTGAATGTCCCTGGTCGGCCCTCTGGCCTCCTGATGTCATGGGAAGAACAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCGTGGTGGGTAGGGAGGTGGGAAAGGTATCGCCCTGGCCTAGGGCTCTTCGGAAATGACCTCAGCTaGGGAACTTTAAAGCCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: LPWWVGRWERYRPGLGLFGNDLS*GTLKPD Trigger: ATCAGGCTTTAAAGTTCCCAAGCTGAGGTCATTTCC...GAAGAGCCCTAGGCCAGGGCGATACCTTTCCCACCTCCCTACCCACCACGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR TCA 72 bp | CCAAGCTGGTTCCAAAATAAGACAATCCAGCCAGCCTaGAAGAGAATCGCAAATGGCCCCGCAGCCCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PSWFQNKTIQPA*KRIANGPAAQA Trigger: GGCCTGGGCTGCGGGGCCATTTGCGATTCTCTTTCAGGCTGGCTGGATTGTCTTATTTTGGAACCAGCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| 3UTR CCA 72 bp | AATCTGCCCCTTGGCAATGAAGTTGCACAGGCAGGATaGCCAAGCTCATTGTGCTGGGAAAGGGCTAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: NLPLGNEVAQAG*PSSLCWERARL Trigger: CAGCCTAGCCCTTTCCCAGCACAATGAGCTTGGCCATCCTGCCTGTGCAACTTCATTGCCAAGGGGCAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR TCA 72 bp | TGGTTCTTGGGTAGCTGTCTGCAGTTCCTCATTCTTTaGAAGAGGTCAGTGGGCCCCCACAGAGGGTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: WFLGSCLQFLIL*KRSVGPHRGSL Trigger: CAGAGACCCTCTGTGGGGGCCCACTGACCTCTTTCAAAGAATGAGGAACTGCAGACAGCTACCCAAGAACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR TCA 72 bp | CAGGATAAAAGGTTCTCACTAAGCTGTCCCTTTCGCTaGCAGGAAAGGTGGCGCAGCTTCCAGCCTGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: QDKRFSLSCPFR*QERWRSFQPVS Trigger: GGAGACAGGCTGGAAGCTGCGCCACCTTTCCTGTCAGCGAAAGGGACAGCTTAGTGAGAACCTTTTATCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGTGCCTCCCTTCCTTCTTCTCATTTCATCGGCTTCAGAGTCAACGTGGGTTGGGGAGAATGGCTTTaGGGGAAGGCGAGGGAATAT | + |
|
Preference number: 3 (lower is better) Translates to: AGASLPSSHFIGFRVNVGWGEWL*GKAREY Trigger: ATATTCCCTCGCCTTCCCCAAAAGCCATTCTCCCCA...ACCCACGTTGACTCTGAAGCCGATGAAATGAGAAGAAGGAAGGGAGGCACCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CAA 90 bp | AACCTTCCACACAGAGACACCTGCTTCAGAGCTGTGTGCTTTCTCCCTTCCGTGGCAGTTCCTCATTCTTaGAAAGAGGTCAGTGGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: NLPHRDTCFRAVCFLPSVAVPHS*KEVSGP Trigger: GGGCCCACTGACCTCTTTCAAAGAATGAGGAACTGC...CACGGAAGGGAGAAAGCACACAGCTCTGAAGCAGGTGTCTCTGTGTGGAAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCGTGGTGGGTAGGGAGGTGGGAAAGGTATCGCCCTGGCCTAGGGCTCTTCGTCCTCTCGTGGATTTaGTATTTCTTCTCTACTCTA | + |
|
Preference number: 3 (lower is better) Translates to: LPWWVGRWERYRPGLGLFVLSWI*YFFSTL Trigger: TAGAGTAGAGAAGAAATACAAAATCCACGAGAGGAC...GAAGAGCCCTAGGCCAGGGCGATACCTTTCCCACCTCCCTACCCACCACGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR CCA 72 bp | TTACTTAATGATAACCCTCAATGGGCTCGCCCCGCATaGGACGGCCAGAGCCGCACAATTTTGTTCGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: LLNDNPQWARPA*DGQSRTILFAI Trigger: AATGGCGAACAAAATTGTGCGGCTCTGGCCGTCCCATGCGGGGCGAGCCCATTGAGGGTTATCATTAAGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTGGGAAAGGTATCGCCCTGGCCTAGGGCTCTTCCTTGTTCTTCCCATGACAAAAATGAGTGGTTCTaGGGTAGCTGTCTGCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: EVGKVSPWPRALPCSSHDKNEWF*GSCLQF Trigger: GAACTGCAGACAGCTACCCAAGAACCACTCATTTTT...GTCATGGGAAGAACAAGGAAGAGCCCTAGGCCAGGGCGATACCTTTCCCACCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTGGGAAAGGTATCGCCCTGGCCTAGGGCTCTTCCTTGTTCTTCCCATGACGATTTTTCTGGCATTTaGTCCATGGACAGCACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: EVGKVSPWPRALPCSSHDDFSGI*SMDSTE Trigger: TTCTGTGCTGTCCATGGACAAAATGCCAGAAAAATC...GTCATGGGAAGAACAAGGAAGAGCCCTAGGCCAGGGCGATACCTTTCCCACCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CAA 90 bp | GGATGTGAGGGAGCCCTTAGGCCAAGGGCTATAGAGTCACAGATTTCCACTCCCGCGAGGGAATATTTCTaGTTGCCAGTAACCAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GCEGALRPRAIESQISTPAREYF*LPVTKA Trigger: AGCTTTGGTTACTGGCAACAAGAAATATTCCCTCGC...GGGAGTGGAAATCTGTGACTCTATAGCCCTTGGCCTAAGGGCTCCCTCACATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGTGCCTCCCTTCCTTCTTCTCATTTCATCGGCTTCAGAGTCAACGTGGGTTGCTTGCTTGCTTGTTaGTGTTTTCCTAGTGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: AGASLPSSHFIGFRVNVGCLLAC*CFPSGP Trigger: GGGACCACTAGGAAAACACAAACAAGCAAGCAAGCA...ACCCACGTTGACTCTGAAGCCGATGAAATGAGAAGAAGGAAGGGAGGCACCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CAA 90 bp | AACCGAGGTCTGCATAATAAGAACCTAGAACCTTCCACACAGAGACACCTGCTTTTGGGAAGATGTGACTaGGGAGGACGGAGGGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: NRGLHNKNLEPSTQRHLLLGRCD*GGRREV Trigger: CACCTCCCTCCGTCCTCCCAAGTCACATCTTCCCAA...AAGCAGGTGTCTCTGTGTGGAAGGTTCTAGGTTCTTATTATGCAGACCTCGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR TCA 72 bp | CTCTGGACAAGAGACAGTAAATCTGCCCCTTGGCAATaGAGTTGCACAGGCAGGATGGCCAAGCTCATTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LWTRDSKSAPWQ*SCTGRMAKLIV Trigger: CACAATGAGCTTGGCCATCCTGCCTGTGCAACTTCATTGCCAAGGGGCAGATTTACTGTCTCTTGTCCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR TCA 72 bp | GCAAGGAAAGCACCAAGCAGAGAGAGTCATGAAAGGTaGGTGGCAGGTGCCTCCCTTCCTTCTTCTCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: ARKAPSRESHER*VAGASLPSSHF Trigger: GAAATGAGAAGAAGGAAGGGAGGCACCTGCCACTCACCTTTCATGACTCTCTCTGCTTGGTGCTTTCCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGTGCCTCCCTTCCTTCTTCTCATTTCATCGGCTTCAGAGTCAACGTGGGTGGAAATGACCTCAGCTaGGGAACTTTAAAGCCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: AGASLPSSHFIGFRVNVGGNDLS*GTLKPD Trigger: ATCAGGCTTTAAAGTTCCCAAGCTGAGGTCATTTCC...ACCCACGTTGACTCTGAAGCCGATGAAATGAGAAGAAGGAAGGGAGGCACCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTGGGAAAGGTATCGCCCTGGCCTAGGGCTCTTCCTTGTTCTTCCCATGACGTCCTCTCGTGGATTTaGTATTTCTTCTCTACTCTA | + |
|
Preference number: 3 (lower is better) Translates to: EVGKVSPWPRALPCSSHDVLSWI*YFFSTL Trigger: TAGAGTAGAGAAGAAATACAAAATCCACGAGAGGAC...GTCATGGGAAGAACAAGGAAGAGCCCTAGGCCAGGGCGATACCTTTCCCACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR TCA 72 bp | AAGGGCTATAGAGTCACAGATTTCCACTCCCACAGTTaGGCTGGGCCAACATCACTGGCGATAGCAAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KGYRVTDFHSHS*AGPTSLAIARK Trigger: TTTCCTTGCTATCGCCAGTGATGTTGGCCCAGCTCAACTGTGGGAGTGGAAATCTGTGACTCTATAGCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR TCA 72 bp | ACAGCACAGAAGGACTGTCTGGTAAGGAGAGGTACATaGCACAAAGAAGCTACTGTGACTGAGTCATCACGG | + |
|
Preference number: 3 (lower is better) Translates to: TAQKDCLVRRGT*HKEATVTESSR Trigger: CCGTGATGACTCAGTCACAGTAGCTTCTTTGTGTCATGTACCTCTCCTTACCAGACAGTCCTTCTGTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR GCA 72 bp | TGGAATGATGCCTGGAAGCTCTCTGATGGTTTGCTTTaGTCTGACTTCAAGGGTTTCGTCCTGGGAGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: WNDAWKLSDGLL*SDFKGFVLGEF Trigger: AAACTCTCCCAGGACGAAACCCTTGAAGTCAGAGCAAAGCAAACCATCAGAGAGCTTCCAGGCATCATTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225529.2 |
||
| 3UTR GCA 72 bp | CCTCCTCCCTTCTTCCACGAGTTGGTAATCTCTGGATaGTGTTTGGTAATGAAAACCCAATCACGGAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PPPFFHELVISG*CLVMKTQSRRS Trigger: TGACCTCCGTGATTGGGTTTTCATTACCAAACAGCATCCAGAGATTACCAACTCGTGGAAGAAGGGAGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTAATGAAAACCCAATCACGGAGGTCATTATCTGATGAGGTTTTTGGAGCACTCTGCTGTCCTACTTaGTTCAGCCCAAACCCCACG | + |
|
Preference number: 3 (lower is better) Translates to: LVMKTQSRRSLSDEVFGALCCPT*FSPNPT Trigger: CGTGGGGTTTGGGCTGAACAAAGTAGGACAGCAGAG...TGCTCCAAAAACCTCATCAGATAATGACCTCCGTGATTGGGTTTTCATTACCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| 3UTR-3UTR CAA 90 bp | AACCGAGGTCTGCATAATAAGAACCTAGAACCTTCCACACAGAGACACCTGCTTCACGGCAGACTGAGGTaGCCTCTTTGCTTTTTAATG | + |
|
Preference number: 3 (lower is better) Translates to: NRGLHNKNLEPSTQRHLLHGRLR*PLCFLM Trigger: CATTAAAAAGCAAAGAGGCAACCTCAGTCTGCCGTG...AAGCAGGTGTCTCTGTGTGGAAGGTTCTAGGTTCTTATTATGCAGACCTCGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR GCA 72 bp | CTGTCTCTAAAAATGAGTGGTTCTTGGGTAGCTGTCTaGAGTTCCTCATTCTTTGAAAGAGGTCAGTGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LSLKMSGSWVAV*SSSFFERGQWA Trigger: GGCCCACTGACCTCTTTCAAAGAATGAGGAACTGCAGACAGCTACCCAAGAACCACTCATTTTTAGAGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCCCAAACCCCACGCCATCCTTCCAAAACTGAGACTACACCTTTATTTACAGCGAGGGAATATTTCTaGTTGCCAGTAACCAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SAQTPRHPSKTETTPLFTAREYF*LPVTKA Trigger: AGCTTTGGTTACTGGCAACAAGAAATATTCCCTCGC...TGTAAATAAAGGTGTAGTCTCAGTTTTGGAAGGATGGCGTGGGGTTTGGGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGGTTGTTTCCGCTTTATTTATGCCGTCAGAGAAACTGTTTAGTCTGCATGACAGAGGGTCTCTGTTaGCTTGCTTGCTTGTTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: AGLFPLYLCRQRNCLVCMTEGLC*LACLFV Trigger: CACAAACAAGCAAGCAAGCAAACAGAGACCCTCTGT...CATGCAGACTAAACAGTTTCTCTGACGGCATAAATAAAGCGGAAACAACCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGGTTGTTTCCGCTTTATTTATGCCGTCAGAGAAACTGTTTAGTCTGCATGCACGGCAGACTGAGGTaGCCTCTTTGCTTTTTAATG | + |
|
Preference number: 3 (lower is better) Translates to: AGLFPLYLCRQRNCLVCMHGRLR*PLCFLM Trigger: CATTAAAAAGCAAAGAGGCAACCTCAGTCTGCCGTG...CATGCAGACTAAACAGTTTCTCTGACGGCATAAATAAAGCGGAAACAACCCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR CCA 72 bp | AAGAAAATGATGGAGTGTGTTAGAGGTTTGAATGCGTaGAGAACTGAGGCAGGCTTTGCTAAACGGCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: KKMMECVRGLNA*RTEAGFAKRLS Trigger: AGACAGCCGTTTAGCAAAGCCTGCCTCAGTTCTCCACGCATTCAAACCTCTAACACACTCCATCATTTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR CCA 72 bp | TGCTTCTTTGTTCCTCCCAAGGAATGTCTGTTCTTCTaGGCTCAACGTCTTTCCAGTGAGTCCTTGTTTATG | + |
|
Preference number: 3 (lower is better) Translates to: CFFVPPKECLFF*AQRLSSESLFM Trigger: CATAAACAAGGACTCACTGGAAAGACGTTGAGCCCAGAAGAACAGACATTCCTTGGGAGGAACAAAGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225529.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGGTTGTTTCCGCTTTATTTATGCCGTCAGAGAAACTGTTTAGTCTGCATGGATTTTTCTGGCATTTaGTCCATGGACAGCACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: AGLFPLYLCRQRNCLVCMDFSGI*SMDSTE Trigger: TTCTGTGCTGTCCATGGACAAAATGCCAGAAAAATC...CATGCAGACTAAACAGTTTCTCTGACGGCATAAATAAAGCGGAAACAACCCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTACAACTTCAAATACAGCAGCAGGCAGGCTGTTTTCCTCGGATTTGAAATACTATCTGATGAGGTTTTaGGAGCAGGCAGGCTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: ITTSNTAAGRLFSSDLKYYLMRF*EQAGFS Trigger: GGAAAAGCCTGCCTGCTCCAAAAACCTCATCAGATA...GTATTTCAAATCCGAGGAAAACAGCCTGCCTGCTGCTGTATTTGAAGTTGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| 3UTR CCA 72 bp | AAGACAATAAAACCGTCTAAACAGGCGCCAAGTCGCTaGCCGTGCGCAATTATTTCCTTGTCAAGTTTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: KTIKPSKQAPSR*PCAIISLSSFY Trigger: ATAAAAACTTGACAAGGAAATAATTGCGCACGGCCAGCGACTTGGCGCCTGTTTAGACGGTTTTATTGTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| 3UTR CCA 72 bp | TTTGCTAAACGGCTGTCTCTAAAAATGAGTGGTTCTTaGGTAGCTGTCTGCAGTTCCTCATTCTTTGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: FAKRLSLKMSGS*VAVCSSSFFER Trigger: TCTTTCAAAGAATGAGGAACTGCAGACAGCTACCCAAGAACCACTCATTTTTAGAGACAGCCGTTTAGCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGGTTGTTTCCGCTTTATTTATGCCGTCAGAGAAACTGTTTAGTCTGCATGACTGAGGTTGCCTCTTaGCTTTTTAATGGTTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: AGLFPLYLCRQRNCLVCMTEVAS*LFNGFF Trigger: AAAGAAACCATTAAAAAGCAAAGAGGCAACCTCAGT...CATGCAGACTAAACAGTTTCTCTGACGGCATAAATAAAGCGGAAACAACCCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR TCA 72 bp | AGGAAGGATGCTACCAAAGCTATTTTGGACAGCAGATaGAGTTACCTAAAGGCAAGTAAGCATTCACCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: RKDATKAILDSR*SYLKASKHSPL Trigger: TAAAGGTGAATGCTTACTTGCCTTTAGGTAACTTCATCTGCTGTCCAAAATAGCTTTGGTAGCATCCTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR GCA 72 bp | TTTGATTCTGGAGCAGGGTTGTTTCCGCTTTATTTATaGCGTCAGAGAAACTGTTTAGTCTGCATGAATTTT | + |
|
Preference number: 3 (lower is better) Translates to: FDSGAGLFPLYL*RQRNCLVCMNF Trigger: AAAATTCATGCAGACTAAACAGTTTCTCTGACGGCATAAATAAAGCGGAAACAACCCTGCTCCAGAATCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| CDS-3UTR GCA 90 bp | ACATGGTGCTGTCGAGTCAGGGCCATGCCCTGTGGTGTGGAGACATGTGTGCTAAGCACTGCGAAGTCCTaGTCGTACCCTTCGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TWCCRVRAMPCGVETCVLSTAKS*SYPSKS Trigger: CGACTTCGAAGGGTACGAGCAGGACTTCGCAGTGCT...TAGCACACATGTCTCCACACCACAGGGCATGGCCCTGACTCGACAGCACCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225529.2 |
||
| 3UTR CAA 72 bp | GAGGTCAGTGGGCCCCCACAGAGGGTCTCTGTTTGCTaGCTTGCTTGTTTGTGTTTTCCTAGTGGTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: EVSGPPQRVSVC*LACLCFPSGPA Trigger: GGCGGGACCACTAGGAAAACACAAACAAGCAAGCAAGCAAACAGAGACCCTCTGTGGGGGCCCACTGACCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTGCACAGGCAGGATGGCCAAGCTCATTGTGCTGGGAAAGGGCTAGGCTGGGTCTCCACTGCTATCTaGTACCCAGCCTCTAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLHRQDGQAHCAGKGLGWVSTAI*YPASSL Trigger: GAGACTAGAGGCTGGGTACCAGATAGCAGTGGAGAC...CCAGCCTAGCCCTTTCCCAGCACAATGAGCTTGGCCATCCTGCCTGTGCAACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| CDS-3UTR CCA 90 bp | CCTTGTTCTTCCCATGACATCAGGAGGCCAGAGGGCCGACCAGGGACATTCAGAGTCTCCACTGCTATCTaGTACCCAGCCTCTAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PCSSHDIRRPEGRPGTFRVSTAI*YPASSL Trigger: GAGACTAGAGGCTGGGTACCAGATAGCAGTGGAGAC...TCTGAATGTCCCTGGTCGGCCCTCTGGCCTCCTGATGTCATGGGAAGAACAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| CDS-3UTR GCA 90 bp | AACCTTCCACACAGAGACACCTGCTTCAGAGCTGTGTGCTTTCTCCCTTCCGTGAGCACTGCGAAGTCCTaGTCGTACCCTTCGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: NLPHRDTCFRAVCFLPSVSTAKS*SYPSKS Trigger: CGACTTCGAAGGGTACGAGCAGGACTTCGCAGTGCT...CACGGAAGGGAGAAAGCACACAGCTCTGAAGCAGGTGTCTCTGTGTGGAAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| CDS-3UTR CCA 90 bp | TCGAGTCAGGGCCATGCCCTGTGGTGTGGAGACATGTGTGCTAGGCTCTCCTGCTCCTCGACTTTGGGGTaGAATTTCTCGAACTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSQGHALWCGDMCARLSCSSTLG*NFSNFQ Trigger: TTGGAAGTTCGAGAAATTCCACCCCAAAGTCGAGGA...GCAGGAGAGCCTAGCACACATGTCTCCACACCACAGGGCATGGCCCTGACTCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225529.2 |
||
| CDS-3UTR GCA 90 bp | CATTCTTTGAAAGAGGTCAGTGGGCCCCCACAGAGGGTCTCTGTTTGCTTGCTTAGCACTGCGAAGTCCTaGTCGTACCCTTCGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HSLKEVSGPPQRVSVCLLSTAKS*SYPSKS Trigger: CGACTTCGAAGGGTACGAGCAGGACTTCGCAGTGCT...AAGCAAGCAAACAGAGACCCTCTGTGGGGGCCCACTGACCTCTTTCAAAGAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTGCTGACATGGTGCTGTCGAGTCAGGGCCATGCCCTGTGGTGTGGAGACAGCTGTTTCTCCACATTaGCAACCATTTGCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLLTWCCRVRAMPCGVETAVSPH*QPFASS Trigger: AGAAGAAGCAAATGGTTGCCAATGTGGAGAAACAGC...TGTCTCCACACCACAGGGCATGGCCCTGACTCGACAGCACCATGTCAGCAGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225529.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTGCACAGGCAGGATGGCCAAGCTCATTGTGCTGGGAAAGGGCTAGGCTGGGTTCAAGCAGTTCTCTaGCCTCTTCAAGCTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLHRQDGQAHCAGKGLGWVQAVL*PLQAVS Trigger: AGAAACAGCTTGAAGAGGCCAGAGAACTGCTTGAAC...CCAGCCTAGCCCTTTCCCAGCACAATGAGCTTGGCCATCCTGCCTGTGCAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTGCACAGGCAGGATGGCCAAGCTCATTGTGCTGGGAAAGGGCTAGGCTGGTCCTCGACTTTGGGGTaGAATTTCTCGAACTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KLHRQDGQAHCAGKGLGWSSTLG*NFSNFQ Trigger: TTGGAAGTTCGAGAAATTCCACCCCAAAGTCGAGGA...CCAGCCTAGCCCTTTCCCAGCACAATGAGCTTGGCCATCCTGCCTGTGCAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| CDS-3UTR CCA 90 bp | CCTTGTTCTTCCCATGACATCAGGAGGCCAGAGGGCCGACCAGGGACATTCAGAGCTGTTTCTCCACATTaGCAACCATTTGCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PCSSHDIRRPEGRPGTFRAVSPH*QPFASS Trigger: AGAAGAAGCAAATGGTTGCCAATGTGGAGAAACAGC...TCTGAATGTCCCTGGTCGGCCCTCTGGCCTCCTGATGTCATGGGAAGAACAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTGCACAGGCAGGATGGCCAAGCTCATTGTGCTGGGAAAGGGCTAGGCTGGTACATTCCTCGACTTTaGGGTGGAATTTCTCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: KLHRQDGQAHCAGKGLGWYIPRL*GGISRT Trigger: AGTTCGAGAAATTCCACCCCAAAGTCGAGGAATGTA...CCAGCCTAGCCCTTTCCCAGCACAATGAGCTTGGCCATCCTGCCTGTGCAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR CAA 72 bp | TCTCACGCTGCCAGCAAGTTCTGGGGAGAATGGCTTTaGGGGAAGGCGAGGGAATATTTCTTGTTGCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SHAASKFWGEWL*GKAREYFLLPV Trigger: TACTGGCAACAAGAAATATTCCCTCGCCTTCCCCAAAAGCCATTCTCCCCAGAACTTGCTGGCAGCGTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| CDS-3UTR GCA 90 bp | AGTGAGTCCTTGTTTATGCAGAAGCTAGAAGGCCCAAACAGAAAGCCAACCCGAGTTATCCAGCAGATGTaGCCTCTGGTTCTCGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SESLFMQKLEGPNRKPTRVIQQM*PLVLGG Trigger: TCCTCCGAGAACCAGAGGGCACATCTGCTGGATAAC...TCGGGTTGGCTTTCTGTTTGGGCCTTCTAGCTTCTGCATAAACAAGGACTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225529.2 |
||
| CDS-3UTR CCA 90 bp | AACCTTCCACACAGAGACACCTGCTTCAGAGCTGTGTGCTTTCTCCCTTCCGTGTACATTCCTCGACTTTaGGGTGGAATTTCTCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: NLPHRDTCFRAVCFLPSVYIPRL*GGISRT Trigger: AGTTCGAGAAATTCCACCCCAAAGTCGAGGAATGTA...CACGGAAGGGAGAAAGCACACAGCTCTGAAGCAGGTGTCTCTGTGTGGAAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCCAGTGAGTCCTTGTTTATGCAGAAGCTAGAAGGCCCAAACAGAAAGCCAGTCTCCACTGCTATCTaGTACCCAGCCTCTAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSSESLFMQKLEGPNRKPVSTAI*YPASSL Trigger: GAGACTAGAGGCTGGGTACCAGATAGCAGTGGAGAC...TGGCTTTCTGTTTGGGCCTTCTAGCTTCTGCATAAACAAGGACTCACTGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225529.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGGTTGTTTCCGCTTTATTTATGCCGTCAGAGAAACTGTTTAGTCTGCATGGTTATCCAGCAGATGTaGCCTCTGGTTCTCGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGLFPLYLCRQRNCLVCMVIQQM*PLVLGG Trigger: TCCTCCGAGAACCAGAGGGCACATCTGCTGGATAAC...CATGCAGACTAAACAGTTTCTCTGACGGCATAAATAAAGCGGAAACAACCCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095950.3 |
||
| CDS-3UTR CCA 90 bp | GGCCAACCGTCCCTCTCTGCTTCTTTGTTCCTCCCAAGGAATGTCTGTTCTTCTTACATTCCTCGACTTTaGGGTGGAATTTCTCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: GQPSLSASLFLPRNVCSSYIPRL*GGISRT Trigger: AGTTCGAGAAATTCCACCCCAAAGTCGAGGAATGTA...AGAAGAACAGACATTCCTTGGGAGGAACAAAGAAGCAGAGAGGGACGGTTGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225529.2 |
||
| CDS-3UTR CCA 90 bp | AACCTTCCACACAGAGACACCTGCTTCAGAGCTGTGTGCTTTCTCCCTTCCGTGCGTAATTTTATCAACTaGTTCTCGGAGGAATTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NLPHRDTCFRAVCFLPSVRNFIN*FSEEFP Trigger: TGGGAATTCCTCCGAGAACCAGTTGATAAAATTACG...CACGGAAGGGAGAAAGCACACAGCTCTGAAGCAGGTGTCTCTGTGTGGAAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| CDS-3UTR CCA 90 bp | ACGGCCAGAGCCGCACAATTTTGTTCGCCATTAATTTCAGCCTTTGAAGCTCCGGCTGTTTCTCCACATTaGCAACCATTTGCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TARAAQFCSPLISAFEAPAVSPH*QPFASS Trigger: AGAAGAAGCAAATGGTTGCCAATGTGGAGAAACAGC...CGGAGCTTCAAAGGCTGAAATTAATGGCGAACAAAATTGTGCGGCTCTGGCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| 3UTR CAA 72 bp | CTGTTCTTCTGGGCTCAACGTCTTTCCAGTGAGTCCTaGTTTATGCAGAAGCTAGAAGGCCCAAACAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFFWAQRLSSES*FMQKLEGPNRK Trigger: CTTTCTGTTTGGGCCTTCTAGCTTCTGCATAAACAAGGACTCACTGGAAAGACGTTGAGCCCAGAAGAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225529.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGGTTGTTTCCGCTTTATTTATGCCGTCAGAGAAACTGTTTAGTCTGCATGACTGTAGGCGATCCGTaGCCTTTTAAAATCCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGLFPLYLCRQRNCLVCMTVGDP*PFKIRF Trigger: GAAACGGATTTTAAAAGGTCACGGATCGCCTACAGT...CATGCAGACTAAACAGTTTCTCTGACGGCATAAATAAAGCGGAAACAACCCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| CDS-3UTR TCA 90 bp | TATTACTATGCTTTACATAGGAGATTTCATGACTTCCCGAGAGGCCAACCGTCCACTGTAGGCGATCCGTaGCCTTTTAAAATCCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YYYALHRRFHDFPRGQPSTVGDP*PFKIRF Trigger: GAAACGGATTTTAAAAGGTCACGGATCGCCTACAGT...GGACGGTTGGCCTCTCGGGAAGTCATGAAATCTCCTATGTAAAGCATAGTAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225529.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGGTTGTTTCCGCTTTATTTATGCCGTCAGAGAAACTGTTTAGTCTGCATGGTTCAAGCAGTTCTCTaGCCTCTTCAAGCTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGLFPLYLCRQRNCLVCMVQAVL*PLQAVS Trigger: AGAAACAGCTTGAAGAGGCCAGAGAACTGCTTGAAC...CATGCAGACTAAACAGTTTCTCTGACGGCATAAATAAAGCGGAAACAACCCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR CAA 72 bp | CCCTTCTTCCACGAGTTGGTAATCTCTGGATGCTGTTaGGTAATGAAAACCCAATCACGGAGGTCATTATCT | + |
|
Preference number: 4 (lower is better) Translates to: PFFHELVISGCC*VMKTQSRRSLS Trigger: AGATAATGACCTCCGTGATTGGGTTTTCATTACCAAACAGCATCCAGAGATTACCAACTCGTGGAAGAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| CDS-3UTR CCA 90 bp | TTTGATTCTGGAGCAGGGTTGTTTCCGCTTTATTTATGCCGTCAGAGAAACTGTTCCTCGACTTTGGGGTaGAATTTCTCGAACTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FDSGAGLFPLYLCRQRNCSSTLG*NFSNFQ Trigger: TTGGAAGTTCGAGAAATTCCACCCCAAAGTCGAGGA...ACAGTTTCTCTGACGGCATAAATAAAGCGGAAACAACCCTGCTCCAGAATCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| 3UTR CAA 72 bp | AAGAAAGGGAAGAAAATGATGGAGTGTGTTAGAGGTTaGAATGCGTGGAGAACTGAGGCAGGCTTTGCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: KKGKKMMECVRG*NAWRTEAGFAK Trigger: TTTAGCAAAGCCTGCCTCAGTTCTCCACGCATTCAAACCTCTAACACACTCCATCATTTTCTTCCCTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCGTGGTGGGTAGGGAGGTGGGAAAGGTATCGCCCTGGCCTAGGGCTCTTCAGCTCTTCCCCAGGTTaGCATCTGCGTCCCGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPWWVGRWERYRPGLGLFSSSPG*HLRPGV Trigger: GACTCCGGGACGCAGATGCAAACCTGGGGAAGAGCT...GAAGAGCCCTAGGCCAGGGCGATACCTTTCCCACCTCCCTACCCACCACGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTGCACAGGCAGGATGGCCAAGCTCATTGTGCTGGGAAAGGGCTAGGCTGGAGCTCTTCCCCAGGTTaGCATCTGCGTCCCGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: KLHRQDGQAHCAGKGLGWSSSPG*HLRPGV Trigger: GACTCCGGGACGCAGATGCAAACCTGGGGAAGAGCT...CCAGCCTAGCCCTTTCCCAGCACAATGAGCTTGGCCATCCTGCCTGTGCAACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| CDS-3UTR CAA 90 bp | TCGAGTCAGGGCCATGCCCTGTGGTGTGGAGACATGTGTGCTAGGCTCTCCTGCGTTTTCCAACATCTCTaGGCCGATTTGCTCAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSQGHALWCGDMCARLSCVFQHL*ADLLSL Trigger: GAGACTGAGCAAATCGGCCAAGAGATGTTGGAAAAC...GCAGGAGAGCCTAGCACACATGTCTCCACACCACAGGGCATGGCCCTGACTCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225529.2 |
||
| CDS CCA 90 bp | GCGATGACCACGATGATCCCCAAGATGACGAGCAGGATACGGTTCTaGATGATTCTTCGCAGCATCCCCGTCAGAATCCGAGAGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AMTTMIPKMTSRIRF*MILRSIPVRIRELF Trigger: GAAGAGCTCTCGGATTCTGACGGGGATGCTGCGAAGAATCATCCAGAACCGTATCCTGCTCGTCATCTTGGGGATCATCGTGGTCATCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCAAGGAATGTCTGTTCTTCTGGGCTCAACGTCTTTCCAGTGAGTCCTTGTAGCTCTTCCCCAGGTTaGCATCTGCGTCCCGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPRNVCSSGLNVFPVSPCSSSPG*HLRPGV Trigger: GACTCCGGGACGCAGATGCAAACCTGGGGAAGAGCT...ACAAGGACTCACTGGAAAGACGTTGAGCCCAGAAGAACAGACATTCCTTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225529.2 |
||
| CDS CCA 90 bp | TCTGTTCAAGCAGTTCTCTGGCCTCTTCAAGCTGTTTCTCCACATTaGCAACCATTTGCTTCTTCTCATCGGGAGGGAGCCGAGGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: SVQAVLWPLQAVSPH*QPFASSHREGAEGP Trigger: GGGTCCCTCGGCTCCCTCCCGATGAGAAGAAGCAAATGGTTGCCAATGTGGAGAAACAGCTTGAAGAGGCCAGAGAACTGCTTGAACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 ENSMUST00000225529.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTGCACAGGCAGGATGGCCAAGCTCATTGTGCTGGGAAAGGGCTAGGCTGGGTTTTCCAACATCTCTaGGCCGATTTGCTCAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KLHRQDGQAHCAGKGLGWVFQHL*ADLLSL Trigger: GAGACTGAGCAAATCGGCCAAGAGATGTTGGAAAAC...CCAGCCTAGCCCTTTCCCAGCACAATGAGCTTGGCCATCCTGCCTGTGCAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| CDS GCA 90 bp | AGTTCTCTGGCCTCTTCAAGCTGTTTCTCCACATTGGCAACCATTTaGTTCTTCTCATCGGGAGGGAGCCGAGGGACCCTTGCAATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSLASSSCFSTLATI*FFSSGGSRGTLAIL Trigger: CAAGATTGCAAGGGTCCCTCGGCTCCCTCCCGATGAGAAGAAGCAAATGGTTGCCAATGTGGAGAAACAGCTTGAAGAGGCCAGAGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 ENSMUST00000225529.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGGAAAGGTATCGCCCTGGCCTAGGGCTCTTCCTTGTTCTTCCCATGACCAGTTTCCCCATTTCTaGCTTGTAGCTTCTCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: EVGKVSPWPRALPCSSHDQFPHF*LVASHP Trigger: AGGATGAGAAGCTACAAGCAAGAAATGGGGAAACTG...GTCATGGGAAGAACAAGGAAGAGCCCTAGGCCAGGGCGATACCTTTCCCACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| CDS-3UTR CAA 90 bp | GCTTTACATAGGAGATTTCATGACTTCCCGAGAGGCCAACCGTCCCTCTCTGCTCACATTGGCAACCATTaGCTTCTTCTCATCGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALHRRFHDFPRGQPSLSAHIGNH*LLLIGR Trigger: CCTCCCGATGAGAAGAAGCAAATGGTTGCCAATGTG...AGCAGAGAGGGACGGTTGGCCTCTCGGGAAGTCATGAAATCTCCTATGTAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225529.2 |
||
| CDS-3UTR CAA 90 bp | ACGGCCAGAGCCGCACAATTTTGTTCGCCATTAATTTCAGCCTTTGAAGCTCCGCACATTGGCAACCATTaGCTTCTTCTCATCGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TARAAQFCSPLISAFEAPHIGNH*LLLIGR Trigger: CCTCCCGATGAGAAGAAGCAAATGGTTGCCAATGTG...CGGAGCTTCAAAGGCTGAAATTAATGGCGAACAAAATTGTGCGGCTCTGGCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| CDS CCA 90 bp | GTGTTATCCAGCAGATGTGCCCTCTCTTCACGTAATTTTATCAACTaGTTCTCGGAGGAATTCCCAGCATCCCCTAGGAGCTCATTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: VLSSRCALSSRNFIN*FSEEFPASPRSSFR Trigger: ACGGAATGAGCTCCTAGGGGATGCTGGGAATTCCTCCGAGAACCAGTTGATAAAATTACGTGAAGAGAGGGCACATCTGCTGGATAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| CDS-3UTR CAA 90 bp | TCAGCCCAAACCCCACGCCATCCTTCCAAAACTGAGACTACACCTTTATTTACACACATTGGCAACCATTaGCTTCTTCTCATCGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SAQTPRHPSKTETTPLFTHIGNH*LLLIGR Trigger: CCTCCCGATGAGAAGAAGCAAATGGTTGCCAATGTG...TGTAAATAAAGGTGTAGTCTCAGTTTTGGAAGGATGGCGTGGGGTTTGGGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| CDS-3UTR CAA 90 bp | CACACACTTTTAAACAAAGGCTCCCAGCTTCACAAATGCTCAACAACCGAGGTCGTTTTCCAACATCTCTaGGCCGATTTGCTCAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HTLLNKGSQLHKCSTTEVVFQHL*ADLLSL Trigger: GAGACTGAGCAAATCGGCCAAGAGATGTTGGAAAAC...GACCTCGGTTGTTGAGCATTTGTGAAGCTGGGAGCCTTTGTTTAAAAGTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| CDS GCA 90 bp | CCGTTTCCAGTTTCCCCATTTCTTGCTTGTAGCTTCTCATCCTGTTaGTATACATTCCTCGACTTTGGGGTGGAATTTCTCGAACTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PFPVSPFLACSFSSC*YTFLDFGVEFLELP Trigger: TGGAAGTTCGAGAAATTCCACCCCAAAGTCGAGGAATGTATAGCAACAGGATGAGAAGCTACAAGCAAGAAATGGGGAAACTGGAAACGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 ENSMUST00000225529.2 |
||
| CDS CCA 90 bp | CTTGTAGCTTCTCATCCTGTTGCTATACATTCCTCGACTTTGGGGTaGAATTTCTCGAACTTCCAAATCCATCTGTTCAAGCAGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVASHPVAIHSSTLG*NFSNFQIHLFKQFS Trigger: AGAGAACTGCTTGAACAGATGGATTTGGAAGTTCGAGAAATTCCACCCCAAAGTCGAGGAATGTATAGCAACAGGATGAGAAGCTACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 ENSMUST00000225529.2 |
||
| CDS-3UTR CAA 90 bp | ATTACAACTTCAAATACAGCAGCAGGCAGGCTGTTTTCCTCGGATTTGAAATACCAGTTTCCCCATTTCTaGCTTGTAGCTTCTCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: ITTSNTAAGRLFSSDLKYQFPHF*LVASHP Trigger: AGGATGAGAAGCTACAAGCAAGAAATGGGGAAACTG...GTATTTCAAATCCGAGGAAAACAGCCTGCCTGCTGCTGTATTTGAAGTTGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
||
| CDS GCA 72 bp | GCCTCTTCAAGCTGTTTCTCCACATTGGCAACCATTTaGTTCTTCTCATCGGGAGGGAGCCGAGGGACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: ASSSCFSTLATI*FFSSGGSRGTL Trigger: AAGGGTCCCTCGGCTCCCTCCCGATGAGAAGAAGCAAATGGTTGCCAATGTGGAGAAACAGCTTGAAGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 ENSMUST00000225529.2 |
||
| CDS CCA 72 bp | ATCTCTTGGCCGATTTGCTCAGTCTCCACTGCTATCTaGTACCCAGCCTCTAGTCTCCGAGACGACCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ISWPICSVSTAI*YPASSLRDDLS Trigger: GGAAAGGTCGTCTCGGAGACTAGAGGCTGGGTACCAGATAGCAGTGGAGACTGAGCAAATCGGCCAAGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 ENSMUST00000225529.2 |
||
| CDS CCA 72 bp | ACGATGATCCCCAAGATGACGAGCAGGATACGGTTCTaGATGATTCTTCGCAGCATCCCCGTCAGAATCCGA | + |
|
Preference number: 6 (lower is better) Translates to: TMIPKMTSRIRF*MILRSIPVRIR Trigger: TCGGATTCTGACGGGGATGCTGCGAAGAATCATCCAGAACCGTATCCTGCTCGTCATCTTGGGGATCATCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 |
||
| CDS CAA 90 bp | CAGTTCTCTGGCCTCTTCAAGCTGTTTCTCCACATTGGCAACCATTaGCTTCTTCTCATCGGGAGGGAGCCGAGGGACCCTTGCAATCTT | + |
|
Preference number: 6 (lower is better) Translates to: QFSGLFKLFLHIGNH*LLLIGREPRDPCNL Trigger: AAGATTGCAAGGGTCCCTCGGCTCCCTCCCGATGAGAAGAAGCAAATGGTTGCCAATGTGGAGAAACAGCTTGAAGAGGCCAGAGAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 ENSMUST00000225529.2 |
||
| CDS CAA 90 bp | ATCTGTTCAAGCAGTTCTCTGGCCTCTTCAAGCTGTTTCTCCACATaGGCAACCATTTGCTTCTTCTCATCGGGAGGGAGCCGAGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: ICSSSSLASSSCFST*ATICFFSSGGSRGT Trigger: GGTCCCTCGGCTCCCTCCCGATGAGAAGAAGCAAATGGTTGCCAATGTGGAGAAACAGCTTGAAGAGGCCAGAGAACTGCTTGAACAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 ENSMUST00000225529.2 |
||
| CDS CAA 72 bp | AGCAGTTCTCTGGCCTCTTCAAGCTGTTTCTCCACATaGGCAACCATTTGCTTCTTCTCATCGGGAGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SSSLASSSCFST*ATICFFSSGGS Trigger: GCTCCCTCCCGATGAGAAGAAGCAAATGGTTGCCAATGTGGAGAAACAGCTTGAAGAGGCCAGAGAACTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 ENSMUST00000225529.2 |
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| CDS CCA 72 bp | AGCAGATGTGCCCTCTCTTCACGTAATTTTATCAACTaGTTCTCGGAGGAATTCCCAGCATCCCCTAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SRCALSSRNFIN*FSEEFPASPRS Trigger: GCTCCTAGGGGATGCTGGGAATTCCTCCGAGAACCAGTTGATAAAATTACGTGAAGAGAGGGCACATCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223690.2 |
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| CDS CAA 72 bp | CTTTTCTCTGTCATGACTCAGGTTTTCCAACATCTCTaGGCCGATTTGCTCAGTCTCCACTGCTATCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: LFSVMTQVFQHL*ADLLSLHCYLV Trigger: TACCAGATAGCAGTGGAGACTGAGCAAATCGGCCAAGAGATGTTGGAAAACCTGAGTCATGACAGAGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 ENSMUST00000225529.2 |
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| CDS GCA 72 bp | GTTTCCCCATTTCTTGCTTGTAGCTTCTCATCCTGTTaGTATACATTCCTCGACTTTGGGGTGGAATTTCTC | + |
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Preference number: 6 (lower is better) Translates to: VSPFLACSFSSC*YTFLDFGVEFL Trigger: GAGAAATTCCACCCCAAAGTCGAGGAATGTATAGCAACAGGATGAGAAGCTACAAGCAAGAAATGGGGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 ENSMUST00000225529.2 |
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| CDS CAA 72 bp | GTAGCTTCTCATCCTGTTGCTATACATTCCTCGACTTaGGGGTGGAATTTCTCGAACTTCCAAATCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: VASHPVAIHSST*GWNFSNFQIHL Trigger: CAGATGGATTTGGAAGTTCGAGAAATTCCACCCCAAAGTCGAGGAATGTATAGCAACAGGATGAGAAGCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 ENSMUST00000225529.2 |
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| CDS CAA 90 bp | TTCTTGCTTGTAGCTTCTCATCCTGTTGCTATACATTCCTCGACTTaGGGGTGGAATTTCTCGAACTTCCAAATCCATCTGTTCAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: FLLVASHPVAIHSST*GWNFSNFQIHLFKQ Trigger: CTGCTTGAACAGATGGATTTGGAAGTTCGAGAAATTCCACCCCAAAGTCGAGGAATGTATAGCAACAGGATGAGAAGCTACAAGCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 ENSMUST00000225529.2 |
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| CDS CCA 72 bp | TCTCATCCTGTTGCTATACATTCCTCGACTTTGGGGTaGAATTTCTCGAACTTCCAAATCCATCTGTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: SHPVAIHSSTLG*NFSNFQIHLFK Trigger: CTTGAACAGATGGATTTGGAAGTTCGAGAAATTCCACCCCAAAGTCGAGGAATGTATAGCAACAGGATGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095950.3 ENSMUST00000223690.2 ENSMUST00000225529.2 |
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