Pregenerated sensors for VSX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021239Ensembl transcript IDs: ENSMUST00000021665.12, ENSMUST00000169934.4
Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGTGCTCGGGACACCGAGGCAGGGCCTCAATCCAATCACAGCTCTaGCCGGCTGTGGGCTGGGTTTACAGCAGTGGGCGCAGCCGCCCA | + |
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Preference number: 1 (lower is better) Translates to: GCSGHRGRASIQSQL*PAVGWVYSSGRSRP Trigger: TGGGCGGCTGCGCCCACTGCTGTAAACCCAGCCCACAGCCGGGCAGAGCTGTGATTGGATTGAGGCCCTGCCTCGGTGTCCCGAGCACCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR GCA 90 bp | GGGCCTGAGGTGTGGGGAGGTGTGGCAGAAGCCAGACATGGGCCTTaGCTCAGAGAGAACTCGCCACACCGCAGGGCTGCAGGGCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: GPEVWGGVAEARHGP*LRENSPHRRAAGLE Trigger: CTCCAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTCTCTGAGGCAAGGCCCATGTCTGGCTTCTGCCACACCTCCCCACACCTCAGGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR TCA 90 bp | CACCGTGGACCAGCTGAGCAGTGCATCCTCACAGCAGGACCCACGTaGCCCGGCTGTGCATTCACACAGCAGGAGCCAGCCAGGGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: HRGPAEQCILTAGPT*PGCAFTQQEPARVQ Trigger: CTGGACCCTGGCTGGCTCCTGCTGTGTGAATGCACAGCCGGGTCACGTGGGTCCTGCTGTGAGGATGCACTGCTCAGCTGGTCCACGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR TCA 90 bp | CATTGCCGAGAAGCGCCCCGCCCTCAGGCTGCAGGGCCTAGACACTaGCAAGGTGGTGTGGCCCACCTCTGCAAAGGAGGAACATGTAGG | + |
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Preference number: 1 (lower is better) Translates to: HCREAPRPQAAGPRH*QGGVAHLCKGGTCR Trigger: CCTACATGTTCCTCCTTTGCAGAGGTGGGCCACACCACCTTGTCAGTGTCTAGGCCCTGCAGCCTGAGGGCGGGGCGCTTCTCGGCAATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR GCA 90 bp | GTCCAGGTCTGCGAGAAGGAACAGGTGAAGAGGGAAAAGCCTGCCTaGAAAGTGCTGGGGTGCTCGGGACACCGAGGCAGGGCCTCAATC | + |
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Preference number: 1 (lower is better) Translates to: VQVCEKEQVKREKPA*KVLGCSGHRGRASI Trigger: GATTGAGGCCCTGCCTCGGTGTCCCGAGCACCCCAGCACTTTGCAGGCAGGCTTTTCCCTCTTCACCTGTTCCTTCTCGCAGACCTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR CCA 90 bp | TCTAGAGTCGTGGGGGTAATTGCGGGCCTGAGGTGTGGGGAGGTGTaGCAGAAGCCAGACATGGGCCTTGCCTCAGAGAGAACTCGCCAC | + |
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Preference number: 1 (lower is better) Translates to: SRVVGVIAGLRCGEV*QKPDMGLASERTRH Trigger: GTGGCGAGTTCTCTCTGAGGCAAGGCCCATGTCTGGCTTCTGCCACACCTCCCCACACCTCAGGCCCGCAATTACCCCCACGACTCTAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR GCA 90 bp | CCCGGCTGTGCATTCACACAGCAGGAGCCAGCCAGGGTCCAGGTCTaGGAGAAGGAACAGGTGAAGAGGGAAAAGCCTGCCTGCAAAGTG | + |
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Preference number: 1 (lower is better) Translates to: PGCAFTQQEPARVQV*EKEQVKREKPACKV Trigger: CACTTTGCAGGCAGGCTTTTCCCTCTTCACCTGTTCCTTCTCGCAGACCTGGACCCTGGCTGGCTCCTGCTGTGTGAATGCACAGCCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR CCA 90 bp | GACCTCGATGTCGGGGTAGCAAGAAGGCTTTGGAGGCAGGGAAGCTaGGCTGAGGCTGAGGACGCTGGATCGGGAGTATGTCCAGGATGT | + |
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Preference number: 1 (lower is better) Translates to: DLDVGVARRLWRQGS*AEAEDAGSGVCPGC Trigger: ACATCCTGGACATACTCCCGATCCAGCGTCCTCAGCCTCAGCCCAGCTTCCCTGCCTCCAAAGCCTTCTTGCTACCCCGACATCGAGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR GCA 90 bp | AAGGAACAGGTGAAGAGGGAAAAGCCTGCCTGCAAAGTGCTGGGGTaGTCGGGACACCGAGGCAGGGCCTCAATCCAATCACAGCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: KEQVKREKPACKVLG*SGHRGRASIQSQLC Trigger: GCAGAGCTGTGATTGGATTGAGGCCCTGCCTCGGTGTCCCGAGCACCCCAGCACTTTGCAGGCAGGCTTTTCCCTCTTCACCTGTTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR TCA 90 bp | CAGGCTCGGTGCGGAGAAGGCCTGAGGATGATCTACAGCACGGCGTaGGACAGGTTTGGGGAAGGACTCAATCTGAGAGTTGCCCTGTTT | + |
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Preference number: 1 (lower is better) Translates to: QARCGEGLRMIYSTA*DRFGEGLNLRVALF Trigger: AAACAGGGCAACTCTCAGATTGAGTCCTTCCCCAAACCTGTCTCACGCCGTGCTGTAGATCATCCTCAGGCCTTCTCCGCACCGAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR GCA 90 bp | CCCTGTTTAGACTTGAATCTGCCCATCAGCAGGCAGGGCAGAGAATaGAGAGGTTACACCGTGGACCAGCTGAGCAGTGCATCCTCACAG | + |
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Preference number: 1 (lower is better) Translates to: PCLDLNLPISRQGRE*RGYTVDQLSSASSQ Trigger: CTGTGAGGATGCACTGCTCAGCTGGTCCACGGTGTAACCTCTGCATTCTCTGCCCTGCCTGCTGATGGGCAGATTCAAGTCTAAACAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR CCA 90 bp | AAAGTCATAGGCAGAAGGGTCAAAATGCTTCAGACACCCAGGCCCTaGGGTGCAAAAGCTCTGGGTGAGGGCTCACCAGCAGTAAAGCAA | + |
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Preference number: 1 (lower is better) Translates to: KVIGRRVKMLQTPRP*GAKALGEGSPAVKQ Trigger: TTGCTTTACTGCTGGTGAGCCCTCACCCAGAGCTTTTGCACCCCAGGGCCTGGGTGTCTGAAGCATTTTGACCCTTCTGCCTATGACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR-3UTR CCA 90 bp | GGACACCGAGGCAGGGCCTCAATCCAATCACAGCTCTGCCCGGCTGTGGGCTGGGCAGGGCTGCAGGGCTaGAGAAGAGCAGTTCCGAGG | + |
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Preference number: 2 (lower is better) Translates to: GHRGRASIQSQLCPAVGWAGLQG*RRAVPR Trigger: CCTCGGAACTGCTCTTCTCCAGCCCTGCAGCCCTGC...CCAGCCCACAGCCGGGCAGAGCTGTGATTGGATTGAGGCCCTGCCTCGGTGTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR-3UTR GCA 90 bp | AAGCCACAGCATTGCCGAGAAGCGCCCCGCCCTCAGGCTGCAGGGCCTAGACACGCCAGACATGGGCCTTaGCTCAGAGAGAACTCGCCA | + |
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Preference number: 2 (lower is better) Translates to: KPQHCREAPRPQAAGPRHARHGP*LRENSP Trigger: TGGCGAGTTCTCTCTGAGGCAAGGCCCATGTCTGGC...GTGTCTAGGCCCTGCAGCCTGAGGGCGGGGCGCTTCTCGGCAATGCTGTGGCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR-3UTR GCA 90 bp | TCTGCAAAGGAGGAACATGTAGGGCAGGCTCGGTGCGGAGAAGGCCTGAGGATGGCCACACCGCAGGGCTaGAGGGCTGGAGAAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: SAKEEHVGQARCGEGLRMATPQG*RAGEEQ Trigger: CTGCTCTTCTCCAGCCCTGCAGCCCTGCGGTGTGGC...CATCCTCAGGCCTTCTCCGCACCGAGCCTGCCCTACATGTTCCTCCTTTGCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR-3UTR CCA 90 bp | AAGCCACAGCATTGCCGAGAAGCGCCCCGCCCTCAGGCTGCAGGGCCTAGACACATGAGGGGGCTAAGCTaGGGAGGAAGGCTTAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: KPQHCREAPRPQAAGPRHMRGLS*GGRLRE Trigger: CTCTCTAAGCCTTCCTCCCCAGCTTAGCCCCCTCAT...GTGTCTAGGCCCTGCAGCCTGAGGGCGGGGCGCTTCTCGGCAATGCTGTGGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAGGGCAGAGAATGCAGAGGTTACACCGTGGACCAGCTGAGCAGTGCATCTGCCCGGCTGTGGGCTaGGTTTACAGCAGTGGGCGC | + |
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Preference number: 2 (lower is better) Translates to: QAGQRMQRLHRGPAEQCICPAVG*VYSSGR Trigger: GCGCCCACTGCTGTAAACCCAGCCCACAGCCGGGCA...GATGCACTGCTCAGCTGGTCCACGGTGTAACCTCTGCATTCTCTGCCCTGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAGGGCAGAGAATGCAGAGGTTACACCGTGGACCAGCTGAGCAGTGCATCGCAGGGCTGCAGGGCTaGAGAAGAGCAGTTCCGAGG | + |
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Preference number: 2 (lower is better) Translates to: QAGQRMQRLHRGPAEQCIAGLQG*RRAVPR Trigger: CCTCGGAACTGCTCTTCTCCAGCCCTGCAGCCCTGC...GATGCACTGCTCAGCTGGTCCACGGTGTAACCTCTGCATTCTCTGCCCTGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR-3UTR TCA 90 bp | GCCCTCAGGCTGCAGGGCCTAGACACTGACAAGGTGGTGTGGCCCACCTCTGCAGGGAAGGACTCAATCTaGGAGTTGCCCTGTTTAGAC | + |
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Preference number: 2 (lower is better) Translates to: ALRLQGLDTDKVVWPTSAGKDSI*ELPCLD Trigger: GTCTAAACAGGGCAACTCTCAGATTGAGTCCTTCCC...TGCAGAGGTGGGCCACACCACCTTGTCAGTGTCTAGGCCCTGCAGCCTGAGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR-3UTR TCA 90 bp | CCCAGAAGGCTCTGCACCCCTAGTACATGTATAAAGCCAGGTGGAAGGGGCATCGCAGGGCCTAGACACTaGCAAGGTGGTGTGGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: PRRLCTPSTCIKPGGRGIAGPRH*QGGVAH Trigger: GTGGGCCACACCACCTTGTCAGTGTCTAGGCCCTGC...GATGCCCCTTCCACCTGGCTTTATACATGTACTAGGGGTGCAGAGCCTTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR-3UTR GCA 90 bp | TCTGCAAAGGAGGAACATGTAGGGCAGGCTCGGTGCGGAGAAGGCCTGAGGATGGCCAGGGTCCAGGTCTaGGAGAAGGAACAGGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: SAKEEHVGQARCGEGLRMARVQV*EKEQVK Trigger: CTTCACCTGTTCCTTCTCGCAGACCTGGACCCTGGC...CATCCTCAGGCCTTCTCCGCACCGAGCCTGCCCTACATGTTCCTCCTTTGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR-3UTR GCA 90 bp | CCCAGAAGGCTCTGCACCCCTAGTACATGTATAAAGCCAGGTGGAAGGGGCATCGTAGGGCAGGCTCGGTaGGGAGAAGGCCTGAGGATG | + |
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Preference number: 2 (lower is better) Translates to: PRRLCTPSTCIKPGGRGIVGQAR*GEGLRM Trigger: CATCCTCAGGCCTTCTCCGCACCGAGCCTGCCCTAC...GATGCCCCTTCCACCTGGCTTTATACATGTACTAGGGGTGCAGAGCCTTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR-3UTR TCA 90 bp | CAGGCAGGGCAGAGAATGCAGAGGTTACACCGTGGACCAGCTGAGCAGTGCATCGCGAGAAGGAACAGGTaGAGAGGGAAAAGCCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: QAGQRMQRLHRGPAEQCIARRNR*RGKSLP Trigger: AGGCAGGCTTTTCCCTCTTCACCTGTTCCTTCTCGC...GATGCACTGCTCAGCTGGTCCACGGTGTAACCTCTGCATTCTCTGCCCTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR-3UTR CCA 90 bp | GTCATAGGCAGAAGGGTCAAAATGCTTCAGACACCCAGGCCCTGGGGTGCAAAACTGCCTGCAAAGTGCTaGGGTGCTCGGGACACCGAG | + |
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Preference number: 2 (lower is better) Translates to: VIGRRVKMLQTPRPWGAKLPAKC*GARDTE Trigger: CTCGGTGTCCCGAGCACCCCAGCACTTTGCAGGCAG...TTTTGCACCCCAGGGCCTGGGTGTCTGAAGCATTTTGACCCTTCTGCCTATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR-3UTR GCA 90 bp | AACAGCAGTTCTCAACCTGTGGGTCATGACCCCCATGGCCCCTTTGGAGGAAGTGCCAGACATGGGCCTTaGCTCAGAGAGAACTCGCCA | + |
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Preference number: 2 (lower is better) Translates to: NSSSQPVGHDPHGPFGGSARHGP*LRENSP Trigger: TGGCGAGTTCTCTCTGAGGCAAGGCCCATGTCTGGC...ACTTCCTCCAAAGGGGCCATGGGGGTCATGACCCACAGGTTGAGAACTGCTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR-3UTR TCA 90 bp | AACAGCAGTTCTCAACCTGTGGGTCATGACCCCCATGGCCCCTTTGGAGGAAGTATCTACAGCACGGCGTaGGACAGGTTTGGGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: NSSSQPVGHDPHGPFGGSIYSTA*DRFGEG Trigger: TCCTTCCCCAAACCTGTCTCACGCCGTGCTGTAGAT...ACTTCCTCCAAAGGGGCCATGGGGGTCATGACCCACAGGTTGAGAACTGCTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR-3UTR TCA 90 bp | GAGGACCCCAGAAGGCTCTGCACCCCTAGTACATGTATAAAGCCAGGTGGAAGGACCTGCCTTGTTCTTTaGGCTTTCCCCGTACCTTTC | + |
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Preference number: 2 (lower is better) Translates to: EDPRRLCTPSTCIKPGGRTCLVL*AFPVPF Trigger: GAAAGGTACGGGGAAAGCTCAAAGAACAAGGCAGGT...CCTTCCACCTGGCTTTATACATGTACTAGGGGTGCAGAGCCTTCTGGGGTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR-3UTR GCA 90 bp | CACCTCAGTGTCCAGCTTCTTCCTTCTCACATTATGTACACTATTTACACACCAATCCAATCACAGCTCTaGCCGGCTGTGGGCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: HLSVQLLPSHIMYTIYTPIQSQL*PAVGWV Trigger: AACCCAGCCCACAGCCGGGCAGAGCTGTGATTGGAT...TGGTGTGTAAATAGTGTACATAATGTGAGAAGGAAGAAGCTGGACACTGAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR-3UTR TCA 90 bp | AACGAAGAAGAAATCAACTGTCAAAACAGATTTAAAATCACAACTCACTGCCCGGCAGGGCCTAGACACTaGCAAGGTGGTGTGGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: NEEEINCQNRFKITTHCPAGPRH*QGGVAH Trigger: GTGGGCCACACCACCTTGTCAGTGTCTAGGCCCTGC...CGGGCAGTGAGTTGTGATTTTAAATCTGTTTTGACAGTTGATTTCTTCTTCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR-3UTR CCA 90 bp | AACGAAGAAGAAATCAACTGTCAAAACAGATTTAAAATCACAACTCACTGCCCGCTGGGTTTACAGCAGTaGGCGCAGCCGCCCATGAGG | + |
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Preference number: 2 (lower is better) Translates to: NEEEINCQNRFKITTHCPLGLQQ*AQPPMR Trigger: CCTCATGGGCGGCTGCGCCCACTGCTGTAAACCCAG...CGGGCAGTGAGTTGTGATTTTAAATCTGTTTTGACAGTTGATTTCTTCTTCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR-3UTR CCA 90 bp | AACGAAGAAGAAATCAACTGTCAAAACAGATTTAAAATCACAACTCACTGCCCGAGCTCTGCCCGGCTGTaGGCTGGGTTTACAGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: NEEEINCQNRFKITTHCPSSARL*AGFTAV Trigger: CACTGCTGTAAACCCAGCCCACAGCCGGGCAGAGCT...CGGGCAGTGAGTTGTGATTTTAAATCTGTTTTGACAGTTGATTTCTTCTTCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR CAA 90 bp | ACCACAACACAAGGAACTGTATTAAAGGTCATAGCATTAGGAAGCTaGAGAGCCACTGGGCTACAGGAAGCTCTAGAAAGAAGCCTTAAC | + |
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Preference number: 2 (lower is better) Translates to: TTTQGTVLKVIALGS*RATGLQEALERSLN Trigger: GTTAAGGCTTCTTTCTAGAGCTTCCTGTAGCCCAGTGGCTCTCAAGCTTCCTAATGCTATGACCTTTAATACAGTTCCTTGTGTTGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR-3UTR CCA 90 bp | CACCTCAGTGTCCAGCTTCTTCCTTCTCACATTATGTACACTATTTACACACCAATGTATAAAGCCAGGTaGAAGGGGCATCTGCAGACA | + |
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Preference number: 2 (lower is better) Translates to: HLSVQLLPSHIMYTIYTPMYKAR*KGHLQT Trigger: TGTCTGCAGATGCCCCTTCCACCTGGCTTTATACAT...TGGTGTGTAAATAGTGTACATAATGTGAGAAGGAAGAAGCTGGACACTGAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR-3UTR CCA 90 bp | AACGAAGAAGAAATCAACTGTCAAAACAGATTTAAAATCACAACTCACTGCCCGCCCCCATGGCCCCTTTaGAGGAAGTCACATAATCAG | + |
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Preference number: 2 (lower is better) Translates to: NEEEINCQNRFKITTHCPPPWPL*RKSHNQ Trigger: CTGATTATGTGACTTCCTCCAAAGGGGCCATGGGGG...CGGGCAGTGAGTTGTGATTTTAAATCTGTTTTGACAGTTGATTTCTTCTTCGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR-3UTR CCA 90 bp | AACGAAGAAGAAATCAACTGTCAAAACAGATTTAAAATCACAACTCACTGCCCGGACATGCCATCAGTATaGACAGTGCCACTCCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: NEEEINCQNRFKITTHCPDMPSV*TVPLLC Trigger: GCAAAGGAGTGGCACTGTCCATACTGATGGCATGTC...CGGGCAGTGAGTTGTGATTTTAAATCTGTTTTGACAGTTGATTTCTTCTTCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR CCA 72 bp | ACAGCTCTGCCCGGCTGTGGGCTGGGTTTACAGCAGTaGGCGCAGCCGCCCATGAGGGGGCTAAGCTGGGGA | + |
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Preference number: 3 (lower is better) Translates to: TALPGCGLGLQQ*AQPPMRGLSWG Trigger: TCCCCAGCTTAGCCCCCTCATGGGCGGCTGCGCCCACTGCTGTAAACCCAGCCCACAGCCGGGCAGAGCTGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR GCA 72 bp | GGACACCGAGGCAGGGCCTCAATCCAATCACAGCTCTaGCCGGCTGTGGGCTGGGTTTACAGCAGTGGGCGC | + |
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Preference number: 3 (lower is better) Translates to: GHRGRASIQSQL*PAVGWVYSSGR Trigger: GCGCCCACTGCTGTAAACCCAGCCCACAGCCGGGCAGAGCTGTGATTGGATTGAGGCCCTGCCTCGGTGTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR CCA 72 bp | TCAGAGAGAACTCGCCACACCGCAGGGCTGCAGGGCTaGAGAAGAGCAGTTCCGAGGCCAGCAGCCCTTGCC | + |
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Preference number: 3 (lower is better) Translates to: SERTRHTAGLQG*RRAVPRPAALA Trigger: GGCAAGGGCTGCTGGCCTCGGAACTGCTCTTCTCCAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTCTCTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR CCA 72 bp | GCAGGGCCTCAATCCAATCACAGCTCTGCCCGGCTGTaGGCTGGGTTTACAGCAGTGGGCGCAGCCGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: AGPQSNHSSARL*AGFTAVGAAAH Trigger: ATGGGCGGCTGCGCCCACTGCTGTAAACCCAGCCCACAGCCGGGCAGAGCTGTGATTGGATTGAGGCCCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR TCA 72 bp | CCAGCTGAGCAGTGCATCCTCACAGCAGGACCCACGTaGCCCGGCTGTGCATTCACACAGCAGGAGCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: PAEQCILTAGPT*PGCAFTQQEPA Trigger: GGCTGGCTCCTGCTGTGTGAATGCACAGCCGGGTCACGTGGGTCCTGCTGTGAGGATGCACTGCTCAGCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR GCA 72 bp | GTGTGGGGAGGTGTGGCAGAAGCCAGACATGGGCCTTaGCTCAGAGAGAACTCGCCACACCGCAGGGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: VWGGVAEARHGP*LRENSPHRRAA Trigger: TGCAGCCCTGCGGTGTGGCGAGTTCTCTCTGAGGCAAGGCCCATGTCTGGCTTCTGCCACACCTCCCCACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR CCA 72 bp | GTGGGGGTAATTGCGGGCCTGAGGTGTGGGGAGGTGTaGCAGAAGCCAGACATGGGCCTTGCCTCAGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: VGVIAGLRCGEV*QKPDMGLASER Trigger: TCTCTCTGAGGCAAGGCCCATGTCTGGCTTCTGCCACACCTCCCCACACCTCAGGCCCGCAATTACCCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR TCA 72 bp | AGGGCAGAGAATGCAGAGGTTACACCGTGGACCAGCTaGGCAGTGCATCCTCACAGCAGGACCCACGTGACC | + |
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Preference number: 3 (lower is better) Translates to: RAENAEVTPWTS*AVHPHSRTHVT Trigger: GGTCACGTGGGTCCTGCTGTGAGGATGCACTGCTCAGCTGGTCCACGGTGTAACCTCTGCATTCTCTGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR GCA 72 bp | GTGAAGAGGGAAAAGCCTGCCTGCAAAGTGCTGGGGTaGTCGGGACACCGAGGCAGGGCCTCAATCCAATCA | + |
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Preference number: 3 (lower is better) Translates to: VKREKPACKVLG*SGHRGRASIQS Trigger: TGATTGGATTGAGGCCCTGCCTCGGTGTCCCGAGCACCCCAGCACTTTGCAGGCAGGCTTTTCCCTCTTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| 3UTR GCA 72 bp | ACCTCTGCAAAGGAGGAACATGTAGGGCAGGCTCGGTaGGGAGAAGGCCTGAGGATGATCTACAGCACGGCG | + |
|
Preference number: 3 (lower is better) Translates to: TSAKEEHVGQAR*GEGLRMIYSTA Trigger: CGCCGTGCTGTAGATCATCCTCAGGCCTTCTCCGCACCGAGCCTGCCCTACATGTTCCTCCTTTGCAGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| 3UTR CCA 72 bp | CTCAGGCTGCAGGGCCTAGACACTGACAAGGTGGTGTaGCCCACCTCTGCAAAGGAGGAACATGTAGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LRLQGLDTDKVV*PTSAKEEHVGQ Trigger: CTGCCCTACATGTTCCTCCTTTGCAGAGGTGGGCCACACCACCTTGTCAGTGTCTAGGCCCTGCAGCCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| 3UTR CCA 72 bp | GGCAGAAGGGTCAAAATGCTTCAGACACCCAGGCCCTaGGGTGCAAAAGCTCTGGGTGAGGGCTCACCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GRRVKMLQTPRP*GAKALGEGSPA Trigger: TGCTGGTGAGCCCTCACCCAGAGCTTTTGCACCCCAGGGCCTGGGTGTCTGAAGCATTTTGACCCTTCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| 3UTR GCA 72 bp | CCTGGGAATACAGGAGCAGAGGACCCCAGAAGGCTCTaGACCCCTAGTACATGTATAAAGCCAGGTGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PGNTGAEDPRRL*TPSTCIKPGGR Trigger: CCTTCCACCTGGCTTTATACATGTACTAGGGGTGCAGAGCCTTCTGGGGTCCTCTGCTCCTGTATTCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| 3UTR TCA 72 bp | TGCGGAGAAGGCCTGAGGATGATCTACAGCACGGCGTaGGACAGGTTTGGGGAAGGACTCAATCTGAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: CGEGLRMIYSTA*DRFGEGLNLRV Trigger: AACTCTCAGATTGAGTCCTTCCCCAAACCTGTCTCACGCCGTGCTGTAGATCATCCTCAGGCCTTCTCCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| 3UTR-3UTR CAA 90 bp | GAGGACCCCAGAAGGCTCTGCACCCCTAGTACATGTATAAAGCCAGGTGGAAGGATAGCATTAGGAAGCTaGAGAGCCACTGGGCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: EDPRRLCTPSTCIKPGGRIALGS*RATGLQ Trigger: CTGTAGCCCAGTGGCTCTCAAGCTTCCTAATGCTAT...CCTTCCACCTGGCTTTATACATGTACTAGGGGTGCAGAGCCTTCTGGGGTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| 3UTR TCA 72 bp | GCACGGCGTGAGACAGGTTTGGGGAAGGACTCAATCTaGGAGTTGCCCTGTTTAGACTTGAATCTGCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: ARRETGLGKDSI*ELPCLDLNLPI Trigger: GATGGGCAGATTCAAGTCTAAACAGGGCAACTCTCAGATTGAGTCCTTCCCCAAACCTGTCTCACGCCGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| 3UTR GCA 72 bp | AGCCAGGTGGAAGGGGCATCTGCAGACAGAGACATCTaGAGACAGGGACATCTGAAGACATGCCATCAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: SQVEGASADRDI*RQGHLKTCHQY Trigger: ATACTGATGGCATGTCTTCAGATGTCCCTGTCTGCAGATGTCTCTGTCTGCAGATGCCCCTTCCACCTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| 3UTR CCA 72 bp | GGATGTCTCAGCATGGTCCAAAGCTACGGACAGAATTaGTCTGTTTCTAGAGTCGTGGGGGTAATTGCGGGC | + |
|
Preference number: 3 (lower is better) Translates to: GCLSMVQSYGQN*SVSRVVGVIAG Trigger: GCCCGCAATTACCCCCACGACTCTAGAAACAGACCAATTCTGTCCGTAGCTTTGGACCATGCTGAGACATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| 3UTR CCA 72 bp | GCTCCTTATCTATGGACACCTTTCTGGGCATACAGCTaGCACGGAGCTATGAGCGTCTGTAGCTTAGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: APYLWTPFWAYS*HGAMSVCSLVW Trigger: CCAGACTAAGCTACAGACGCTCATAGCTCCGTGCCAGCTGTATGCCCAGAAAGGTGTCCATAGATAAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| 3UTR CCA 72 bp | CAGTCCAACATGGCTCCTTATCTATGGACACCTTTCTaGGCATACAGCTGGCACGGAGCTATGAGCGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: QSNMAPYLWTPF*AYSWHGAMSVC Trigger: ACAGACGCTCATAGCTCCGTGCCAGCTGTATGCCCAGAAAGGTGTCCATAGATAAGGAGCCATGTTGGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| 3UTR CCA 72 bp | GCAGAAGGCATTCAGTCCAACATGGCTCCTTATCTATaGACACCTTTCTGGGCATACAGCTGGCACGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: AEGIQSNMAPYL*TPFWAYSWHGA Trigger: AGCTCCGTGCCAGCTGTATGCCCAGAAAGGTGTCCATAGATAAGGAGCCATGTTGGACTGAATGCCTTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| 3UTR CCA 72 bp | CTGCAGACAGGGACATCTGAAGACATGCCATCAGTATaGACAGTGCCACTCCTTTGCAGGCAGAAGGCATTC | + |
|
Preference number: 3 (lower is better) Translates to: LQTGTSEDMPSV*TVPLLCRQKAF Trigger: GAATGCCTTCTGCCTGCAAAGGAGTGGCACTGTCCATACTGATGGCATGTCTTCAGATGTCCCTGTCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| 3UTR GCA 72 bp | GAAGACATGCCATCAGTATGGACAGTGCCACTCCTTTaGAGGCAGAAGGCATTCAGTCCAACATGGCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: EDMPSVWTVPLL*RQKAFSPTWLL Trigger: AAGGAGCCATGTTGGACTGAATGCCTTCTGCCTGCAAAGGAGTGGCACTGTCCATACTGATGGCATGTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| 3UTR CCA 72 bp | ACGCTGGATCGGGAGTATGTCCAGGATGTCTCAGCATaGTCCAAAGCTACGGACAGAATTGGTCTGTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: TLDREYVQDVSA*SKATDRIGLFL Trigger: TAGAAACAGACCAATTCTGTCCGTAGCTTTGGACCATGCTGAGACATCCTGGACATACTCCCGATCCAGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| 3UTR CCA 72 bp | CACCCATTTTCTCTAAAGCAGGCACATGTGAACCAATaGGCTACAACAGCAGTTCTCAACCTGTGGGTCATG | + |
|
Preference number: 3 (lower is better) Translates to: HPFSLKQAHVNQ*ATTAVLNLWVM Trigger: CATGACCCACAGGTTGAGAACTGCTGTTGTAGCCCATTGGTTCACATGTGCCTGCTTTAGAGAAAATGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR GCA 90 bp | GAGAACTCGCCACACCGCAGGGCTGCAGGGCTGGAGAAGAGCAGTTCCGAGGCCGCCCCAGCAGCCCCATaGTGCCCACTCCTGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ENSPHRRAAGLEKSSSEAAPAAP*CPLLPG Trigger: GCCCGGCAGGAGTGGGCAGCATGGGGCTGCTGGGGC...GGCCTCGGAACTGCTCTTCTCCAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR GCA 90 bp | GGACACCGAGGCAGGGCCTCAATCCAATCACAGCTCTGCCCGGCTGTGGGCTGGGCCCCAGCAGCCCCATaGTGCCCACTCCTGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GHRGRASIQSQLCPAVGWAPAAP*CPLLPG Trigger: GCCCGGCAGGAGTGGGCAGCATGGGGCTGCTGGGGC...CCAGCCCACAGCCGGGCAGAGCTGTGATTGGATTGAGGCCCTGCCTCGGTGTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR GCA 90 bp | CACAGCAGGACCCACGTGACCCGGCTGTGCATTCACACAGCAGGAGCCAGCCAGGGATGCCGAACCCTGTaGACCTGGCCGGGGCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HSRTHVTRLCIHTAGASQGCRTL*TWPGRP Trigger: GGGGCGCCCCGGCCAGGTGCACAGGGTTCGGCATCC...CTGGCTGGCTCCTGCTGTGTGAATGCACAGCCGGGTCACGTGGGTCCTGCTGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CCA 90 bp | AAGCCACAGCATTGCCGAGAAGCGCCCCGCCCTCAGGCTGCAGGGCCTAGACACAGCTGGCCGTCTGGCTaGTGTCCAGCGGCCCCGACG | + |
|
Preference number: 4 (lower is better) Translates to: KPQHCREAPRPQAAGPRHSWPSG*CPAAPT Trigger: CGTCGGGGCCGCTGGACACCAGCCAGACGGCCAGCT...GTGTCTAGGCCCTGCAGCCTGAGGGCGGGGCGCTTCTCGGCAATGCTGTGGCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CCA 90 bp | AGACATGGGCCTTGCCTCAGAGAGAACTCGCCACACCGCAGGGCTGCAGGGCTGTCGGAGCTGGCCGTCTaGCTGGTGTCCAGCGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RHGPCLRENSPHRRAAGLSELAV*LVSSGP Trigger: GGGGCCGCTGGACACCAGCCAGACGGCCAGCTCCGA...CAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTCTCTGAGGCAAGGCCCATGTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CCA 90 bp | GCCCTCAGGCTGCAGGGCCTAGACACTGACAAGGTGGTGTGGCCCACCTCTGCATCGGAGCTGGCCGTCTaGCTGGTGTCCAGCGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ALRLQGLDTDKVVWPTSASELAV*LVSSGP Trigger: GGGGCCGCTGGACACCAGCCAGACGGCCAGCTCCGA...TGCAGAGGTGGGCCACACCACCTTGTCAGTGTCTAGGCCCTGCAGCCTGAGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CCA 90 bp | TGCTGGGGTGCTCGGGACACCGAGGCAGGGCCTCAATCCAATCACAGCTCTGCCGGCTGCCTGGGCCTCTaGGGCCCGTTCCTCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CWGARDTEAGPQSNHSSAGCLGL*GPFLLL Trigger: GAGCAGGAGGAACGGGCCCCAGAGGCCCAGGCAGCC...GGCAGAGCTGTGATTGGATTGAGGCCCTGCCTCGGTGTCCCGAGCACCCCAGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR TCA 90 bp | GGACACCGAGGCAGGGCCTCAATCCAATCACAGCTCTGCCCGGCTGTGGGCTGGGACCATACTCAGCCATaGCGCTGCTCCGGCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHRGRASIQSQLCPAVGWDHTQP*RCSGPS Trigger: GCTGGGGCCGGAGCAGCGTCATGGCTGAGTATGGTC...CCAGCCCACAGCCGGGCAGAGCTGTGATTGGATTGAGGCCCTGCCTCGGTGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CCA 90 bp | GCCTCAGAGAGAACTCGCCACACCGCAGGGCTGCAGGGCTGGAGAAGAGCAGTTAGCTGGCCGTCTGGCTaGTGTCCAGCGGCCCCGACG | + |
|
Preference number: 4 (lower is better) Translates to: ASERTRHTAGLQGWRRAVSWPSG*CPAAPT Trigger: CGTCGGGGCCGCTGGACACCAGCCAGACGGCCAGCT...AACTGCTCTTCTCCAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTCTCTGAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CCA 90 bp | CACAGCAGGACCCACGTGACCCGGCTGTGCATTCACACAGCAGGAGCCAGCCAGTGGGAGATGGCTGCCTaGGCCTCTGGGGCCCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSRTHVTRLCIHTAGASQWEMAA*ASGARS Trigger: GGAACGGGCCCCAGAGGCCCAGGCAGCCATCTCCCA...CTGGCTGGCTCCTGCTGTGTGAATGCACAGCCGGGTCACGTGGGTCCTGCTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CCA 90 bp | AGACATGGGCCTTGCCTCAGAGAGAACTCGCCACACCGCAGGGCTGCAGGGCTGTGGGAGATGGCTGCCTaGGCCTCTGGGGCCCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RHGPCLRENSPHRRAAGLWEMAA*ASGARS Trigger: GGAACGGGCCCCAGAGGCCCAGGCAGCCATCTCCCA...CAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTCTCTGAGGCAAGGCCCATGTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| 3UTR CAA 72 bp | GGTGAGGGCTCACCAGCAGTAAAGCAAGCCACAGCATaGCCGAGAAGCGCCCCGCCCTCAGGCTGCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GEGSPAVKQATA*PRSAPPSGCRA Trigger: GGCCCTGCAGCCTGAGGGCGGGGCGCTTCTCGGCAATGCTGTGGCTTGCTTTACTGCTGGTGAGCCCTCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR TCA 90 bp | CACAGCAGGACCCACGTGACCCGGCTGTGCATTCACACAGCAGGAGCCAGCCAGGACCATACTCAGCCATaGCGCTGCTCCGGCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HSRTHVTRLCIHTAGASQDHTQP*RCSGPS Trigger: GCTGGGGCCGGAGCAGCGTCATGGCTGAGTATGGTC...CTGGCTGGCTCCTGCTGTGTGAATGCACAGCCGGGTCACGTGGGTCCTGCTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR TCA 90 bp | TGCTGGGGTGCTCGGGACACCGAGGCAGGGCCTCAATCCAATCACAGCTCTGCCCCAGCTGCGGTGGGCTaGGCTTCTCAGCTGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CWGARDTEAGPQSNHSSAPAAVG*ASQLAC Trigger: ACAGGCCAGCTGAGAAGCTCAGCCCACCGCAGCTGG...GGCAGAGCTGTGATTGGATTGAGGCCCTGCCTCGGTGTCCCGAGCACCCCAGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR GCA 90 bp | CACAGCAGGACCCACGTGACCCGGCTGTGCATTCACACAGCAGGAGCCAGCCAGGCGGCCCCGACGCTCTaGCTAGTGGCTGCAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSRTHVTRLCIHTAGASQAAPTL*LVAASG Trigger: TCCACTTGCAGCCACTAGGCAGAGCGTCGGGGCCGC...CTGGCTGGCTCCTGCTGTGTGAATGCACAGCCGGGTCACGTGGGTCCTGCTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CCA 90 bp | CACAGCAGGACCCACGTGACCCGGCTGTGCATTCACACAGCAGGAGCCAGCCAGAGCTTGGGCAGGGCCTaGCGTTCCACCTCGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSRTHVTRLCIHTAGASQSLGRA*RSTSGF Trigger: GAAGCCCGAGGTGGAACGCCAGGCCCTGCCCAAGCT...CTGGCTGGCTCCTGCTGTGTGAATGCACAGCCGGGTCACGTGGGTCCTGCTGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR TCA 90 bp | GCCTCAGAGAGAACTCGCCACACCGCAGGGCTGCAGGGCTGGAGAAGAGCAGTTCCAGCTGCGGTGGGCTaGGCTTCTCAGCTGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASERTRHTAGLQGWRRAVPAAVG*ASQLAC Trigger: ACAGGCCAGCTGAGAAGCTCAGCCCACCGCAGCTGG...AACTGCTCTTCTCCAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTCTCTGAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR GCA 90 bp | AAGCCACAGCATTGCCGAGAAGCGCCCCGCCCTCAGGCTGCAGGGCCTAGACACGCCATGTCCTCCAGCTaGGGTGGGCTGAGCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KPQHCREAPRPQAAGPRHAMSSS*GGLSFS Trigger: TGAGAAGCTCAGCCCACCGCAGCTGGAGGACATGGC...GTGTCTAGGCCCTGCAGCCTGAGGGCGGGGCGCTTCTCGGCAATGCTGTGGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CCA 90 bp | AGAGTCGTGGGGGTAATTGCGGGCCTGAGGTGTGGGGAGGTGTGGCAGAAGCCACCCGCGGGTGGGAGCTaGGAGGCTCCTTGTTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RVVGVIAGLRCGEVWQKPPAGGS*EAPCSS Trigger: GCTTGAACAAGGAGCCTCCCAGCTCCCACCCGCGGG...TGGCTTCTGCCACACCTCCCCACACCTCAGGCCCGCAATTACCCCCACGACTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR GCA 90 bp | GGACACCGAGGCAGGGCCTCAATCCAATCACAGCTCTGCCCGGCTGTGGGCTGGTCTCGGATTTGGGCTTaGTCAGCGCTTCCCCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GHRGRASIQSQLCPAVGWSRIWA*SALPPL Trigger: AAGCGGGGGAAGCGCTGAGCAAGCCCAAATCCGAGA...CCAGCCCACAGCCGGGCAGAGCTGTGATTGGATTGAGGCCCTGCCTCGGTGTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR GCA 90 bp | CACAGCAGGACCCACGTGACCCGGCTGTGCATTCACACAGCAGGAGCCAGCCAGGCCATGTCCTCCAGCTaGGGTGGGCTGAGCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSRTHVTRLCIHTAGASQAMSSS*GGLSFS Trigger: TGAGAAGCTCAGCCCACCGCAGCTGGAGGACATGGC...CTGGCTGGCTCCTGCTGTGTGAATGCACAGCCGGGTCACGTGGGTCCTGCTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CCA 90 bp | ACACCGAGGCAGGGCCTCAATCCAATCACAGCTCTGCCCGGCTGTGGGCTGGGTCCTAGTGGCTGCAAGTaGACGCTCTGCGGATCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TPRQGLNPITALPGCGLGPSGCK*TLCGSD Trigger: GTCCGATCCGCAGAGCGTCCACTTGCAGCCACTAGG...ACCCAGCCCACAGCCGGGCAGAGCTGTGATTGGATTGAGGCCCTGCCTCGGTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CCA 90 bp | CACAGCAGGACCCACGTGACCCGGCTGTGCATTCACACAGCAGGAGCCAGCCAGCTTCGGAATCGGAGCTaGCCGTCTGGCTGGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSRTHVTRLCIHTAGASQLRNRS*PSGWCP Trigger: TGGACACCAGCCAGACGGCCAGCTCCGATTCCGAAG...CTGGCTGGCTCCTGCTGTGTGAATGCACAGCCGGGTCACGTGGGTCCTGCTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CCA 90 bp | GCCCTCAGGCTGCAGGGCCTAGACACTGACAAGGTGGTGTGGCCCACCTCTGCAGGAGCTCCGTTTTCATaGCCAGCATCTCCCGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: ALRLQGLDTDKVVWPTSAGAPFS*PASPGR Trigger: ACGCCCGGGAGATGCTGGCCATGAAAACGGAGCTCC...TGCAGAGGTGGGCCACACCACCTTGTCAGTGTCTAGGCCCTGCAGCCTGAGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CCA 90 bp | ACCTCTGCAAAGGAGGAACATGTAGGGCAGGCTCGGTGCGGAGAAGGCCTGAGGAGCTTGGGCAGGGCCTaGCGTTCCACCTCGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TSAKEEHVGQARCGEGLRSLGRA*RSTSGF Trigger: GAAGCCCGAGGTGGAACGCCAGGCCCTGCCCAAGCT...CCTCAGGCCTTCTCCGCACCGAGCCTGCCCTACATGTTCCTCCTTTGCAGAGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CCA 90 bp | GAGAACTCGCCACACCGCAGGGCTGCAGGGCTGGAGAAGAGCAGTTCCGAGGCCTGTGTTCCTGAGCTTTaGCTCGGAGGGCGGCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: ENSPHRRAAGLEKSSSEACVPEL*LGGRQC Trigger: GCATTGCCGCCCTCCGAGCCAAAGCTCAGGAACACA...GGCCTCGGAACTGCTCTTCTCCAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CCA 90 bp | GGACACCGAGGCAGGGCCTCAATCCAATCACAGCTCTGCCCGGCTGTGGGCTGGGCTTCTCAGCATTTCTaGCCAGGCTGTCAGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHRGRASIQSQLCPAVGWASQHF*PGCQAQ Trigger: CTGGGCCTGACAGCCTGGCCAGAAATGCTGAGAAGC...CCAGCCCACAGCCGGGCAGAGCTGTGATTGGATTGAGGCCCTGCCTCGGTGTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CCA 90 bp | GCCCTCAGGCTGCAGGGCCTAGACACTGACAAGGTGGTGTGGCCCACCTCTGCAGCTGAGCTTCTCAGCTaGCCTGTCTTCCTCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALRLQGLDTDKVVWPTSAAELLS*PVFLRG Trigger: GCCACGGAGGAAGACAGGCCAGCTGAGAAGCTCAGC...TGCAGAGGTGGGCCACACCACCTTGTCAGTGTCTAGGCCCTGCAGCCTGAGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR GCA 90 bp | ACACCGAGGCAGGGCCTCAATCCAATCACAGCTCTGCCCGGCTGTGGGCTGGGTCTAGGATCTCCTGGATaGCGAACCCTGTGCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPRQGLNPITALPGCGLGLGSPG*RTLCTW Trigger: CCAGGTGCACAGGGTTCGGCATCCAGGAGATCCTAG...ACCCAGCCCACAGCCGGGCAGAGCTGTGATTGGATTGAGGCCCTGCCTCGGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR GCA 90 bp | GCCTCAGAGAGAACTCGCCACACCGCAGGGCTGCAGGGCTGGAGAAGAGCAGTTGCTCTGCCTAGTGGCTaGAAGTGGACGCTCTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASERTRHTAGLQGWRRAVALPSG*KWTLCG Trigger: TCCGCAGAGCGTCCACTTGCAGCCACTAGGCAGAGC...AACTGCTCTTCTCCAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTCTCTGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR GCA 90 bp | GGACACCGAGGCAGGGCCTCAATCCAATCACAGCTCTGCCCGGCTGTGGGCTGGTCCCGACTCAGCTGCTaGCTCCAGCGACTTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GHRGRASIQSQLCPAVGWSRLSC*LQRLFV Trigger: CACAAAAAGTCGCTGGAGGCAGCAGCTGAGTCGGGA...CCAGCCCACAGCCGGGCAGAGCTGTGATTGGATTGAGGCCCTGCCTCGGTGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | AGACATGGGCCTTGCCTCAGAGAGAACTCGCCACACCGCAGGGCTGCAGGGCTGCCACTGTCTCGGATTTaGGCTTGCTCAGCGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RHGPCLRENSPHRRAAGLPLSRI*ACSALP Trigger: GGGAAGCGCTGAGCAAGCCCAAATCCGAGACAGTGG...CAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTCTCTGAGGCAAGGCCCATGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | CCTCAGAGAGAACTCGCCACACCGCAGGGCTGCAGGGCTGGAGAAGAGCAGTTCCCTAGTGGCTGCAAGTaGACGCTCTGCGGATCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PQRELATPQGCRAGEEQFPSGCK*TLCGSD Trigger: GTCCGATCCGCAGAGCGTCCACTTGCAGCCACTAGG...GAACTGCTCTTCTCCAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTCTCTGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | GCCTCAGAGAGAACTCGCCACACCGCAGGGCTGCAGGGCTGGAGAAGAGCAGTTGGAGCTCCGTTTTCATaGCCAGCATCTCCCGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: ASERTRHTAGLQGWRRAVGAPFS*PASPGR Trigger: ACGCCCGGGAGATGCTGGCCATGAAAACGGAGCTCC...AACTGCTCTTCTCCAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTCTCTGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | AGAGTCGTGGGGGTAATTGCGGGCCTGAGGTGTGGGGAGGTGTGGCAGAAGCCACCATCTTGTCGAGCTTaGGCAGGGCCTGGCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVVGVIAGLRCGEVWQKPPSCRA*AGPGVP Trigger: TGGAACGCCAGGCCCTGCCCAAGCTCGACAAGATGG...TGGCTTCTGCCACACCTCCCCACACCTCAGGCCCGCAATTACCCCCACGACTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | CCCAGAAGGCTCTGCACCCCTAGTACATGTATAAAGCCAGGTGGAAGGGGCATCGGCTGCCTGGGCCTCTaGGGCCCGTTCCTCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRRLCTPSTCIKPGGRGIGCLGL*GPFLLL Trigger: GAGCAGGAGGAACGGGCCCCAGAGGCCCAGGCAGCC...GATGCCCCTTCCACCTGGCTTTATACATGTACTAGGGGTGCAGAGCCTTCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CCA 90 bp | GCCCTCAGGCTGCAGGGCCTAGACACTGACAAGGTGGTGTGGCCCACCTCTGCAGCTTCTCAGCATTTCTaGCCAGGCTGTCAGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALRLQGLDTDKVVWPTSAASQHF*PGCQAQ Trigger: CTGGGCCTGACAGCCTGGCCAGAAATGCTGAGAAGC...TGCAGAGGTGGGCCACACCACCTTGTCAGTGTCTAGGCCCTGCAGCCTGAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR TCA 90 bp | ACCTCTGCAAAGGAGGAACATGTAGGGCAGGCTCGGTGCGGAGAAGGCCTGAGGTTGGTGCTGTGTTCCTaGGCTTTGGCTCGGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TSAKEEHVGQARCGEGLRLVLCS*ALARRA Trigger: CGCCCTCCGAGCCAAAGCTCAGGAACACAGCACCAA...CCTCAGGCCTTCTCCGCACCGAGCCTGCCCTACATGTTCCTCCTTTGCAGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR GCA 90 bp | GCCTCAGAGAGAACTCGCCACACCGCAGGGCTGCAGGGCTGGAGAAGAGCAGTTTCTCGGATTTGGGCTTaGTCAGCGCTTCCCCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASERTRHTAGLQGWRRAVSRIWA*SALPPL Trigger: AAGCGGGGGAAGCGCTGAGCAAGCCCAAATCCGAGA...AACTGCTCTTCTCCAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTCTCTGAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR GCA 90 bp | AGACATGGGCCTTGCCTCAGAGAGAACTCGCCACACCGCAGGGCTGCAGGGCTGCTCGGAGGGCGGCAATaGTGTTCTCCCTCAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RHGPCLRENSPHRRAAGLLGGRQ*CSPSVL Trigger: AAGAACTGAGGGAGAACAGCATTGCCGCCCTCCGAG...CAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTCTCTGAGGCAAGGCCCATGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CCA 90 bp | ACCTCTGCAAAGGAGGAACATGTAGGGCAGGCTCGGTGCGGAGAAGGCCTGAGGCTTCGGAATCGGAGCTaGCCGTCTGGCTGGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSAKEEHVGQARCGEGLRLRNRS*PSGWCP Trigger: TGGACACCAGCCAGACGGCCAGCTCCGATTCCGAAG...CCTCAGGCCTTCTCCGCACCGAGCCTGCCCTACATGTTCCTCCTTTGCAGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | AAGCCACAGCATTGCCGAGAAGCGCCCCGCCCTCAGGCTGCAGGGCCTAGACACCCGGGCGTAGACATCTaGGTAGTGGGCTTCATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KPQHCREAPRPQAAGPRHPGVDI*VVGFIE Trigger: TTCAATGAAGCCCACTACCCAGATGTCTACGCCCGG...GTGTCTAGGCCCTGCAGCCTGAGGGCGGGGCGCTTCTCGGCAATGCTGTGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CCA 90 bp | GAGAACTCGCCACACCGCAGGGCTGCAGGGCTGGAGAAGAGCAGTTCCGAGGCCCCGGGCGTAGACATCTaGGTAGTGGGCTTCATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ENSPHRRAAGLEKSSSEAPGVDI*VVGFIE Trigger: TTCAATGAAGCCCACTACCCAGATGTCTACGCCCGG...GGCCTCGGAACTGCTCTTCTCCAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR GCA 90 bp | AACAGCAGTTCTCAACCTGTGGGTCATGACCCCCATGGCCCCTTTGGAGGAAGTCGCGCAGCTAACAAATaGCCAGGGGCCAGGCCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: NSSSQPVGHDPHGPFGGSRAANK*PGARPS Trigger: CGACGGCCTGGCCCCTGGGCATTTGTTAGCTGCGCG...ACTTCCTCCAAAGGGGCCATGGGGGTCATGACCCACAGGTTGAGAACTGCTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR GCA 90 bp | TCTGCAAAGGAGGAACATGTAGGGCAGGCTCGGTGCGGAGAAGGCCTGAGGATGGCTCTGCCTAGTGGCTaGAAGTGGACGCTCTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SAKEEHVGQARCGEGLRMALPSG*KWTLCG Trigger: TCCGCAGAGCGTCCACTTGCAGCCACTAGGCAGAGC...CATCCTCAGGCCTTCTCCGCACCGAGCCTGCCCTACATGTTCCTCCTTTGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR GCA 90 bp | GAGGACCCCAGAAGGCTCTGCACCCCTAGTACATGTATAAAGCCAGGTGGAAGGGCGGCCCCGACGCTCTaGCTAGTGGCTGCAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EDPRRLCTPSTCIKPGGRAAPTL*LVAASG Trigger: TCCACTTGCAGCCACTAGGCAGAGCGTCGGGGCCGC...CCTTCCACCTGGCTTTATACATGTACTAGGGGTGCAGAGCCTTCTGGGGTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR GCA 90 bp | GCCCTCAGGCTGCAGGGCCTAGACACTGACAAGGTGGTGTGGCCCACCTCTGCATCCCCAGAACCTTGGTaGTGTGTTCCTGAGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALRLQGLDTDKVVWPTSASPEPW*CVPELW Trigger: CCAAAGCTCAGGAACACAGCACCAAGGTTCTGGGGA...TGCAGAGGTGGGCCACACCACCTTGTCAGTGTCTAGGCCCTGCAGCCTGAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR GCA 90 bp | AGACATGGGCCTTGCCTCAGAGAGAACTCGCCACACCGCAGGGCTGCAGGGCTGTCCCCAGAACCTTGGTaGTGTGTTCCTGAGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RHGPCLRENSPHRRAAGLSPEPW*CVPELW Trigger: CCAAAGCTCAGGAACACAGCACCAAGGTTCTGGGGA...CAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTCTCTGAGGCAAGGCCCATGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | AGAGTCGTGGGGGTAATTGCGGGCCTGAGGTGTGGGGAGGTGTGGCAGAAGCCAGCACTTCCAAGAAGGTaGGCTGTGTGTAGAAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RVVGVIAGLRCGEVWQKPALPRR*AVCRSR Trigger: CCGGCTTCTACACACAGCCCACCTTCTTGGAAGTGC...TGGCTTCTGCCACACCTCCCCACACCTCAGGCCCGCAATTACCCCCACGACTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | GCCTCAGAGAGAACTCGCCACACCGCAGGGCTGCAGGGCTGGAGAAGAGCAGTTGCACTTCCAAGAAGGTaGGCTGTGTGTAGAAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ASERTRHTAGLQGWRRAVALPRR*AVCRSR Trigger: CCGGCTTCTACACACAGCCCACCTTCTTGGAAGTGC...AACTGCTCTTCTCCAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTCTCTGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | CAGGCAGGGCAGAGAATGCAGAGGTTACACCGTGGACCAGCTGAGCAGTGCATCGCTGAGCTTCTCAGCTaGCCTGTCTTCCTCCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QAGQRMQRLHRGPAEQCIAELLS*PVFLRG Trigger: GCCACGGAGGAAGACAGGCCAGCTGAGAAGCTCAGC...GATGCACTGCTCAGCTGGTCCACGGTGTAACCTCTGCATTCTCTGCCCTGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | TCTGCAAAGGAGGAACATGTAGGGCAGGCTCGGTGCGGAGAAGGCCTGAGGATGCCACTGTCTCGGATTTaGGCTTGCTCAGCGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SAKEEHVGQARCGEGLRMPLSRI*ACSALP Trigger: GGGAAGCGCTGAGCAAGCCCAAATCCGAGACAGTGG...CATCCTCAGGCCTTCTCCGCACCGAGCCTGCCCTACATGTTCCTCCTTTGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | GCCCTCAGGCTGCAGGGCCTAGACACTGACAAGGTGGTGTGGCCCACCTCTGCACTGTATCCTGTCTTCTaGGAGCTCCGTTTTCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALRLQGLDTDKVVWPTSALYPVF*ELRFHG Trigger: GCCATGAAAACGGAGCTCCCAGAAGACAGGATACAG...TGCAGAGGTGGGCCACACCACCTTGTCAGTGTCTAGGCCCTGCAGCCTGAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | CAGGCAGGGCAGAGAATGCAGAGGTTACACCGTGGACCAGCTGAGCAGTGCATCTGTGTTCCTGAGCTTTaGCTCGGAGGGCGGCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: QAGQRMQRLHRGPAEQCICVPEL*LGGRQC Trigger: GCATTGCCGCCCTCCGAGCCAAAGCTCAGGAACACA...GATGCACTGCTCAGCTGGTCCACGGTGTAACCTCTGCATTCTCTGCCCTGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | CCTCAGAGAGAACTCGCCACACCGCAGGGCTGCAGGGCTGGAGAAGAGCAGTTCCAGTCCCCAGAACCTTaGTGCTGTGTTCCTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PQRELATPQGCRAGEEQFQSPEP*CCVPEL Trigger: AAGCTCAGGAACACAGCACCAAGGTTCTGGGGACTG...GAACTGCTCTTCTCCAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTCTCTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | AACAGCAGTTCTCAACCTGTGGGTCATGACCCCCATGGCCCCTTTGGAGGAAGTGTCCTCCAGCTGCGGTaGGCTGAGCTTCTCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NSSSQPVGHDPHGPFGGSVLQLR*AELLSW Trigger: CCAGCTGAGAAGCTCAGCCCACCGCAGCTGGAGGAC...ACTTCCTCCAAAGGGGCCATGGGGGTCATGACCCACAGGTTGAGAACTGCTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR GCA 90 bp | AACAGCAGTTCTCAACCTGTGGGTCATGACCCCCATGGCCCCTTTGGAGGAAGTGGGGCCCGTTCCTCCTaGTCCATCTTGTCGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NSSSQPVGHDPHGPFGGSGARSS*SILSSL Trigger: CAAGCTCGACAAGATGGAGCAGGAGGAACGGGCCCC...ACTTCCTCCAAAGGGGCCATGGGGGTCATGACCCACAGGTTGAGAACTGCTGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | AACAGCAGTTCTCAACCTGTGGGTCATGACCCCCATGGCCCCTTTGGAGGAAGTCCATCTTGTCGAGCTTaGGCAGGGCCTGGCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NSSSQPVGHDPHGPFGGSPSCRA*AGPGVP Trigger: TGGAACGCCAGGCCCTGCCCAAGCTCGACAAGATGG...ACTTCCTCCAAAGGGGCCATGGGGGTCATGACCCACAGGTTGAGAACTGCTGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | ACCTCTGCAAAGGAGGAACATGTAGGGCAGGCTCGGTGCGGAGAAGGCCTGAGGCAGTCCCCAGAACCTTaGTGCTGTGTTCCTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSAKEEHVGQARCGEGLRQSPEP*CCVPEL Trigger: AAGCTCAGGAACACAGCACCAAGGTTCTGGGGACTG...CCTCAGGCCTTCTCCGCACCGAGCCTGCCCTACATGTTCCTCCTTTGCAGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | GTCATAGGCAGAAGGGTCAAAATGCTTCAGACACCCAGGCCCTGGGGTGCAAAAGTCCTCCAGCTGCGGTaGGCTGAGCTTCTCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VIGRRVKMLQTPRPWGAKVLQLR*AELLSW Trigger: CCAGCTGAGAAGCTCAGCCCACCGCAGCTGGAGGAC...TTTTGCACCCCAGGGCCTGGGTGTCTGAAGCATTTTGACCCTTCTGCCTATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR TCA 90 bp | ACCTCTGCAAAGGAGGAACATGTAGGGCAGGCTCGGTGCGGAGAAGGCCTGAGGGGTAGTGGGCTTCATTaGATGCTTTCTCCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TSAKEEHVGQARCGEGLRGSGLH*MLSPAP Trigger: AGGAGCTGGAGAAAGCATTCAATGAAGCCCACTACC...CCTCAGGCCTTCTCCGCACCGAGCCTGCCCTACATGTTCCTCCTTTGCAGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR GCA 90 bp | CCCAGAAGGCTCTGCACCCCTAGTACATGTATAAAGCCAGGTGGAAGGGGCATCTGCAAGTGGACGCTCTaGGGATCGGACAGCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PRRLCTPSTCIKPGGRGICKWTL*GSDSTS Trigger: GGAAGTGCTGTCCGATCCGCAGAGCGTCCACTTGCA...GATGCCCCTTCCACCTGGCTTTATACATGTACTAGGGGTGCAGAGCCTTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR GCA 90 bp | GTCATAGGCAGAAGGGTCAAAATGCTTCAGACACCCAGGCCCTGGGGTGCAAAAGGGGCCCGTTCCTCCTaGTCCATCTTGTCGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VIGRRVKMLQTPRPWGAKGARSS*SILSSL Trigger: CAAGCTCGACAAGATGGAGCAGGAGGAACGGGCCCC...TTTTGCACCCCAGGGCCTGGGTGTCTGAAGCATTTTGACCCTTCTGCCTATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | GAGAACTCGCCACACCGCAGGGCTGCAGGGCTGGAGAAGAGCAGTTCCGAGGCCGGTTTAAAGCCGATTTaGACATTTTTCGGTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: ENSPHRRAAGLEKSSSEAGLKPI*TFFGHW Trigger: CCAGTGACCGAAAAATGTCCAAATCGGCTTTAAACC...GGCCTCGGAACTGCTCTTCTCCAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR TCA 90 bp | GAGGACCCCAGAAGGCTCTGCACCCCTAGTACATGTATAAAGCCAGGTGGAAGGCTGGGAAAGCCATCTTaGACCAGTAGCCATGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EDPRRLCTPSTCIKPGGRLGKPS*TSSHGA Trigger: TGCCCCATGGCTACTGGTTCAAGATGGCTTTCCCAG...CCTTCCACCTGGCTTTATACATGTACTAGGGGTGCAGAGCCTTCTGGGGTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169934.4 |
||
| CDS-3UTR GCA 90 bp | CACCTCAGTGTCCAGCTTCTTCCTTCTCACATTATGTACACTATTTACACACCAGGATGCCGAACCCTGTaGACCTGGCCGGGGCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HLSVQLLPSHIMYTIYTPGCRTL*TWPGRP Trigger: GGGGCGCCCCGGCCAGGTGCACAGGGTTCGGCATCC...TGGTGTGTAAATAGTGTACATAATGTGAGAAGGAAGAAGCTGGACACTGAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR GCA 90 bp | TCTCTCAGGGATGACGTAGCAGGACCTCGATGTCGGGGTAGCAAGAAGGCTTTGCCTTCCCGACTCAGCTaGTGCCTCCAGCGACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLRDDVAGPRCRGSKKALPSRLS*CLQRLF Trigger: AAAAAGTCGCTGGAGGCAGCAGCTGAGTCGGGAAGG...CAAAGCCTTCTTGCTACCCCGACATCGAGGTCCTGCTACGTCATCCCTGAGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR GCA 90 bp | CCCAGAAGGCTCTGCACCCCTAGTACATGTATAAAGCCAGGTGGAAGGGGCATCCCTTCCCGACTCAGCTaGTGCCTCCAGCGACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRRLCTPSTCIKPGGRGIPSRLS*CLQRLF Trigger: AAAAAGTCGCTGGAGGCAGCAGCTGAGTCGGGAAGG...GATGCCCCTTCCACCTGGCTTTATACATGTACTAGGGGTGCAGAGCCTTCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CCA 90 bp | GTCATAGGCAGAAGGGTCAAAATGCTTCAGACACCCAGGCCCTGGGGTGCAAAACCCCCGAGGTACTCTTaGCCACTGTCTCGGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VIGRRVKMLQTPRPWGAKPPRYS*PLSRIW Trigger: CCAAATCCGAGACAGTGGCCAAGAGTACCTCGGGGG...TTTTGCACCCCAGGGCCTGGGTGTCTGAAGCATTTTGACCCTTCTGCCTATGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CCA 90 bp | GGACACCGAGGCAGGGCCTCAATCCAATCACAGCTCTGCCCGGCTGTGGGCTGGACATTTTTCGGTCACTaGAGGAAACATCTTCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GHRGRASIQSQLCPAVGWTFFGH*RKHLRN Trigger: ATTCCGAAGATGTTTCCTCCAGTGACCGAAAAATGT...CCAGCCCACAGCCGGGCAGAGCTGTGATTGGATTGAGGCCCTGCCTCGGTGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR GCA 90 bp | GTCATAGGCAGAAGGGTCAAAATGCTTCAGACACCCAGGCCCTGGGGTGCAAAACTCGGAGGGCGGCAATaGTGTTCTCCCTCAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VIGRRVKMLQTPRPWGAKLGGRQ*CSPSVL Trigger: AAGAACTGAGGGAGAACAGCATTGCCGCCCTCCGAG...TTTTGCACCCCAGGGCCTGGGTGTCTGAAGCATTTTGACCCTTCTGCCTATGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CCA 90 bp | CCTCAGAGAGAACTCGCCACACCGCAGGGCTGCAGGGCTGGAGAAGAGCAGTTCGGTTTAAAGCCGATTTaGACATTTTTCGGTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQRELATPQGCRAGEEQFGLKPI*TFFGHW Trigger: CCAGTGACCGAAAAATGTCCAAATCGGCTTTAAACC...GAACTGCTCTTCTCCAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTCTCTGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR GCA 90 bp | CACCTCAGTGTCCAGCTTCTTCCTTCTCACATTATGTACACTATTTACACACCACGCGCAGCTAACAAATaGCCAGGGGCCAGGCCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HLSVQLLPSHIMYTIYTPRAANK*PGARPS Trigger: CGACGGCCTGGCCCCTGGGCATTTGTTAGCTGCGCG...TGGTGTGTAAATAGTGTACATAATGTGAGAAGGAAGAAGCTGGACACTGAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR GCA 90 bp | TTGAGCTTTCCCCGTACCTTTCATGTTATACAGCGTGCGTGCATGCGTGCATGTTCCCGACTCAGCTGCTaGCTCCAGCGACTTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSFPRTFHVIQRACMRACSRLSC*LQRLFV Trigger: CACAAAAAGTCGCTGGAGGCAGCAGCTGAGTCGGGA...ACATGCACGCATGCACGCACGCTGTATAACATGAAAGGTACGGGGAAAGCTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | TCTCTCAGGGATGACGTAGCAGGACCTCGATGTCGGGGTAGCAAGAAGGCTTTGGCTTCTTACGCTTCTTaGTCTGGTTTAAAGCCGATT | + |
|
Preference number: 4 (lower is better) Translates to: SLRDDVAGPRCRGSKKALASYAS*SGLKPI Trigger: AATCGGCTTTAAACCAGACCAAGAAGCGTAAGAAGC...CAAAGCCTTCTTGCTACCCCGACATCGAGGTCCTGCTACGTCATCCCTGAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | CACCTCAGTGTCCAGCTTCTTCCTTCTCACATTATGTACACTATTTACACACCACCCCCGAGGTACTCTTaGCCACTGTCTCGGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLSVQLLPSHIMYTIYTPPPRYS*PLSRIW Trigger: CCAAATCCGAGACAGTGGCCAAGAGTACCTCGGGGG...TGGTGTGTAAATAGTGTACATAATGTGAGAAGGAAGAAGCTGGACACTGAGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR GCA 90 bp | GAGGACCCCAGAAGGCTCTGCACCCCTAGTACATGTATAAAGCCAGGTGGAAGGTCCAGCGACTTTTTGTaGATCCCTAAAAAGAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: EDPRRLCTPSTCIKPGGRSSDFL*IPKKNC Trigger: ACAATTCTTTTTAGGGATGCACAAAAAGTCGCTGGA...CCTTCCACCTGGCTTTATACATGTACTAGGGGTGCAGAGCCTTCTGGGGTCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | GTCATAGGCAGAAGGGTCAAAATGCTTCAGACACCCAGGCCCTGGGGTGCAAAAACATTTTTCGGTCACTaGAGGAAACATCTTCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VIGRRVKMLQTPRPWGAKTFFGH*RKHLRN Trigger: ATTCCGAAGATGTTTCCTCCAGTGACCGAAAAATGT...TTTTGCACCCCAGGGCCTGGGTGTCTGAAGCATTTTGACCCTTCTGCCTATGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | TTGAGCTTTCCCCGTACCTTTCATGTTATACAGCGTGCGTGCATGCGTGCATGTGCTTCTTACGCTTCTTaGTCTGGTTTAAAGCCGATT | + |
|
Preference number: 4 (lower is better) Translates to: LSFPRTFHVIQRACMRACASYAS*SGLKPI Trigger: AATCGGCTTTAAACCAGACCAAGAAGCGTAAGAAGC...ACATGCACGCATGCACGCACGCTGTATAACATGAAAGGTACGGGGAAAGCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR GCA 90 bp | AACGAAGAAGAAATCAACTGTCAAAACAGATTTAAAATCACAACTCACTGCCCGTGCAAGTGGACGCTCTaGGGATCGGACAGCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NEEEINCQNRFKITTHCPCKWTL*GSDSTS Trigger: GGAAGTGCTGTCCGATCCGCAGAGCGTCCACTTGCA...CGGGCAGTGAGTTGTGATTTTAAATCTGTTTTGACAGTTGATTTCTTCTTCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | CACCTCAGTGTCCAGCTTCTTCCTTCTCACATTATGTACACTATTTACACACCACTGTATCCTGTCTTCTaGGAGCTCCGTTTTCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: HLSVQLLPSHIMYTIYTPLYPVF*ELRFHG Trigger: GCCATGAAAACGGAGCTCCCAGAAGACAGGATACAG...TGGTGTGTAAATAGTGTACATAATGTGAGAAGGAAGAAGCTGGACACTGAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| 3UTR CAA 72 bp | CAAGGAACTGTATTAAAGGTCATAGCATTAGGAAGCTaGAGAGCCACTGGGCTACAGGAAGCTCTAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGTVLKVIALGS*RATGLQEALER Trigger: TCTTTCTAGAGCTTCCTGTAGCCCAGTGGCTCTCAAGCTTCCTAATGCTATGACCTTTAATACAGTTCCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CCA 90 bp | AACGAAGAAGAAATCAACTGTCAAAACAGATTTAAAATCACAACTCACTGCCCGGGCGTCCTCTTCTTCTaGCTTCTCAGCATTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NEEEINCQNRFKITTHCPGVLFF*LLSISG Trigger: GCCAGAAATGCTGAGAAGCCAGAAGAAGAGGACGCC...CGGGCAGTGAGTTGTGATTTTAAATCTGTTTTGACAGTTGATTTCTTCTTCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR TCA 90 bp | AACGAAGAAGAAATCAACTGTCAAAACAGATTTAAAATCACAACTCACTGCCCGGGTAGTGGGCTTCATTaGATGCTTTCTCCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NEEEINCQNRFKITTHCPGSGLH*MLSPAP Trigger: AGGAGCTGGAGAAAGCATTCAATGAAGCCCACTACC...CGGGCAGTGAGTTGTGATTTTAAATCTGTTTTGACAGTTGATTTCTTCTTCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS GCA 90 bp | CTGCCCACTCCTGCCGGGCTGAGAACGGAGCGCGCAGCTAACAAATaGCCAGGGGCCAGGCCGTCGAGGGCAGCCCGCGGGTGGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPTPAGLRTERAANK*PGARPSRAARGWEL Trigger: CAGCTCCCACCCGCGGGCTGCCCTCGACGGCCTGGCCCCTGGGCATTTGTTAGCTGCGCGCTCCGTTCTCAGCCCGGCAGGAGTGGGCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS CCA 90 bp | GGGGCCCGTTCCTCCTGCTCCATCTTGTCGAGCTTGGGCAGGGCCTaGCGTTCCACCTCGGGCTTCCTTCCCGACTCAGCTGCTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GARSSCSILSSLGRA*RSTSGFLPDSAAAS Trigger: GGAGGCAGCAGCTGAGTCGGGAAGGAAGCCCGAGGTGGAACGCCAGGCCCTGCCCAAGCTCGACAAGATGGAGCAGGAGGAACGGGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS GCA 90 bp | TCTTCCTGGGAGATGGCTGCCTGGGCCTCTGGGGCCCGTTCCTCCTaGTCCATCTTGTCGAGCTTGGGCAGGGCCTGGCGTTCCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SSWEMAAWASGARSS*SILSSLGRAWRSTS Trigger: CGAGGTGGAACGCCAGGCCCTGCCCAAGCTCGACAAGATGGAGCAGGAGGAACGGGCCCCAGAGGCCCAGGCAGCCATCTCCCAGGAAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS GCA 90 bp | GCCGTCTGGCTGGTGTCCAGCGGCCCCGACGCTCTGCCTAGTGGCTaGAAGTGGACGCTCTGCGGATCGGACAGCACTTCCAAGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AVWLVSSGPDALPSG*KWTLCGSDSTSKKV Trigger: CACCTTCTTGGAAGTGCTGTCCGATCCGCAGAGCGTCCACTTGCAGCCACTAGGCAGAGCGTCGGGGCCGCTGGACACCAGCCAGACGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS GCA 90 bp | AATCGGAGCTGGCCGTCTGGCTGGTGTCCAGCGGCCCCGACGCTCTaGCTAGTGGCTGCAAGTGGACGCTCTGCGGATCGGACAGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: NRSWPSGWCPAAPTL*LVAASGRSADRTAL Trigger: AAGTGCTGTCCGATCCGCAGAGCGTCCACTTGCAGCCACTAGGCAGAGCGTCGGGGCCGCTGGACACCAGCCAGACGGCCAGCTCCGATT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CCA 90 bp | GCTAACAAATGCCCAGGGGCCAGGCCGTCGAGGGCAGCCCGCGGGTaGGAGCTGGGAGGCTCCTTGTTCAAGCCTAGGATCTCCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: ANKCPGARPSRAARG*ELGGSLFKPRISWM Trigger: CATCCAGGAGATCCTAGGCTTGAACAAGGAGCCTCCCAGCTCCCACCCGCGGGCTGCCCTCGACGGCCTGGCCCCTGGGCATTTGTTAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CCA 90 bp | GCTTTGGCTCGGAGGGCGGCAATGCTGTTCTCCCTCAGTTCTTCCTaGGAGATGGCTGCCTGGGCCTCTGGGGCCCGTTCCTCCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALARRAAMLFSLSSS*EMAAWASGARSSCS Trigger: GGAGCAGGAGGAACGGGCCCCAGAGGCCCAGGCAGCCATCTCCCAGGAAGAACTGAGGGAGAACAGCATTGCCGCCCTCCGAGCCAAAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CAA 90 bp | GAGAACTCGCCACACCGCAGGGCTGCAGGGCTGGAGAAGAGCAGTTCCGAGGCCTCCATCTTGTCGAGCTaGGGCAGGGCCTGGCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ENSPHRRAAGLEKSSSEASILSS*GRAWRS Trigger: GGAACGCCAGGCCCTGCCCAAGCTCGACAAGATGGA...GGCCTCGGAACTGCTCTTCTCCAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CAA 90 bp | CACAGCAGGACCCACGTGACCCGGCTGTGCATTCACACAGCAGGAGCCAGCCAGGTCTCGGATTTGGGCTaGCTCAGCGCTTCCCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: HSRTHVTRLCIHTAGASQVSDLG*LSASPA Trigger: AGCGGGGGAAGCGCTGAGCAAGCCCAAATCCGAGAC...CTGGCTGGCTCCTGCTGTGTGAATGCACAGCCGGGTCACGTGGGTCCTGCTGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CAA 90 bp | TGCTGGGGTGCTCGGGACACCGAGGCAGGGCCTCAATCCAATCACAGCTCTGCCTCCATCTTGTCGAGCTaGGGCAGGGCCTGGCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CWGARDTEAGPQSNHSSASILSS*GRAWRS Trigger: GGAACGCCAGGCCCTGCCCAAGCTCGACAAGATGGA...GGCAGAGCTGTGATTGGATTGAGGCCCTGCCTCGGTGTCCCGAGCACCCCAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CAA 90 bp | CACAGCAGGACCCACGTGACCCGGCTGTGCATTCACACAGCAGGAGCCAGCCAGTCCTCCTGCTCCATCTaGTCGAGCTTGGGCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HSRTHVTRLCIHTAGASQSSCSI*SSLGRA Trigger: GGCCCTGCCCAAGCTCGACAAGATGGAGCAGGAGGA...CTGGCTGGCTCCTGCTGTGTGAATGCACAGCCGGGTCACGTGGGTCCTGCTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CCA 90 bp | CTCGGAGGGCGGCAATGCTGTTCTCCCTCAGTTCTTCCTGGGAGATaGCTGCCTGGGCCTCTGGGGCCCGTTCCTCCTGCTCCATCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LGGRQCCSPSVLPGR*LPGPLGPVPPAPSC Trigger: ACAAGATGGAGCAGGAGGAACGGGCCCCAGAGGCCCAGGCAGCCATCTCCCAGGAAGAACTGAGGGAGAACAGCATTGCCGCCCTCCGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CAA 90 bp | TGCTGGGGTGCTCGGGACACCGAGGCAGGGCCTCAATCCAATCACAGCTCTGCCGCCACTGTCTCGGATTaGGGCTTGCTCAGCGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CWGARDTEAGPQSNHSSAATVSD*GLLSAS Trigger: GGAAGCGCTGAGCAAGCCCAAATCCGAGACAGTGGC...GGCAGAGCTGTGATTGGATTGAGGCCCTGCCTCGGTGTCCCGAGCACCCCAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CAA 90 bp | CAGGCAGGGCAGAGAATGCAGAGGTTACACCGTGGACCAGCTGAGCAGTGCATCGTCTCGGATTTGGGCTaGCTCAGCGCTTCCCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: QAGQRMQRLHRGPAEQCIVSDLG*LSASPA Trigger: AGCGGGGGAAGCGCTGAGCAAGCCCAAATCCGAGAC...GATGCACTGCTCAGCTGGTCCACGGTGTAACCTCTGCATTCTCTGCCCTGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CAA 90 bp | TGCTGGGGTGCTCGGGACACCGAGGCAGGGCCTCAATCCAATCACAGCTCTGCCCCATCCTTGGCAGACTaGAGGATAGACTCTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CWGARDTEAGPQSNHSSAPSLAD*RIDSGR Trigger: CCTGCCAGAGTCTATCCTCAAGTCTGCCAAGGATGG...GGCAGAGCTGTGATTGGATTGAGGCCCTGCCTCGGTGTCCCGAGCACCCCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS TCA 90 bp | GGATCGAGTGCCTCACCATGGCTCCATAGAGACCATACTCAGCCATaGCGCTGCTCCGGCCCCAGCACTTCTCCCTCTTCCTCCACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSSASPWLHRDHTQP*RCSGPSTSPSSSTW Trigger: CCAAGTGGAGGAAGAGGGAGAAGTGCTGGGGCCGGAGCAGCGTCATGGCTGAGTATGGTCTCTATGGAGCCATGGTGAGGCACTCGATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS GCA 90 bp | GAACCTTGGTGCTGTGTTCCTGAGCTTTGGCTCGGAGGGCGGCAATaGTGTTCTCCCTCAGTTCTTCCTGGGAGATGGCTGCCTGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: EPWCCVPELWLGGRQ*CSPSVLPGRWLPGP Trigger: AGGCCCAGGCAGCCATCTCCCAGGAAGAACTGAGGGAGAACAGCATTGCCGCCCTCCGAGCCAAAGCTCAGGAACACAGCACCAAGGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CAA 90 bp | GCCTCAGAGAGAACTCGCCACACCGCAGGGCTGCAGGGCTGGAGAAGAGCAGTTCCATCCTTGGCAGACTaGAGGATAGACTCTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASERTRHTAGLQGWRRAVPSLAD*RIDSGR Trigger: CCTGCCAGAGTCTATCCTCAAGTCTGCCAAGGATGG...AACTGCTCTTCTCCAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTCTCTGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS GCA 90 bp | TTCTGGCCAGGCTGTCAGGCCCAGATACAGTCCCCAGAACCTTGGTaGTGTGTTCCTGAGCTTTGGCTCGGAGGGCGGCAATGCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FWPGCQAQIQSPEPW*CVPELWLGGRQCCS Trigger: AGAACAGCATTGCCGCCCTCCGAGCCAAAGCTCAGGAACACAGCACCAAGGTTCTGGGGACTGTATCTGGGCCTGACAGCCTGGCCAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CCA 90 bp | GCCCAGATACAGTCCCCAGAACCTTGGTGCTGTGTTCCTGAGCTTTaGCTCGGAGGGCGGCAATGCTGTTCTCCCTCAGTTCTTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AQIQSPEPWCCVPEL*LGGRQCCSPSVLPG Trigger: CCCAGGAAGAACTGAGGGAGAACAGCATTGCCGCCCTCCGAGCCAAAGCTCAGGAACACAGCACCAAGGTTCTGGGGACTGTATCTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CCA 90 bp | CATTTCTGGCCAGGCTGTCAGGCCCAGATACAGTCCCCAGAACCTTaGTGCTGTGTTCCTGAGCTTTGGCTCGGAGGGCGGCAATGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HFWPGCQAQIQSPEP*CCVPELWLGGRQCC Trigger: ACAGCATTGCCGCCCTCCGAGCCAAAGCTCAGGAACACAGCACCAAGGTTCTGGGGACTGTATCTGGGCCTGACAGCCTGGCCAGAAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS TCA 90 bp | CTGTCAGGCCCAGATACAGTCCCCAGAACCTTGGTGCTGTGTTCCTaGGCTTTGGCTCGGAGGGCGGCAATGCTGTTCTCCCTCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSGPDTVPRTLVLCS*ALARRAAMLFSLSS Trigger: AGAACTGAGGGAGAACAGCATTGCCGCCCTCCGAGCCAAAGCTCAGGAACACAGCACCAAGGTTCTGGGGACTGTATCTGGGCCTGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CAA 90 bp | CCCAGAAGGCTCTGCACCCCTAGTACATGTATAAAGCCAGGTGGAAGGGGCATCGCCACTGTCTCGGATTaGGGCTTGCTCAGCGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRRLCTPSTCIKPGGRGIATVSD*GLLSAS Trigger: GGAAGCGCTGAGCAAGCCCAAATCCGAGACAGTGGC...GATGCCCCTTCCACCTGGCTTTATACATGTACTAGGGGTGCAGAGCCTTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CAA 90 bp | AGACATGGGCCTTGCCTCAGAGAGAACTCGCCACACCGCAGGGCTGCAGGGCTGCGCTTCTTACGCTTCTaGGTCTGGTTTAAAGCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: RHGPCLRENSPHRRAAGLRFLRF*VWFKAD Trigger: ATCGGCTTTAAACCAGACCAAGAAGCGTAAGAAGCG...CAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTCTCTGAGGCAAGGCCCATGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CAA 90 bp | GTCATAGGCAGAAGGGTCAAAATGCTTCAGACACCCAGGCCCTGGGGTGCAAAATCCTCCTGCTCCATCTaGTCGAGCTTGGGCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VIGRRVKMLQTPRPWGAKSSCSI*SSLGRA Trigger: GGCCCTGCCCAAGCTCGACAAGATGGAGCAGGAGGA...TTTTGCACCCCAGGGCCTGGGTGTCTGAAGCATTTTGACCCTTCTGCCTATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CAA 90 bp | GCCTCAGAGAGAACTCGCCACACCGCAGGGCTGCAGGGCTGGAGAAGAGCAGTTCGCTTCTTACGCTTCTaGGTCTGGTTTAAAGCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: ASERTRHTAGLQGWRRAVRFLRF*VWFKAD Trigger: ATCGGCTTTAAACCAGACCAAGAAGCGTAAGAAGCG...AACTGCTCTTCTCCAGCCCTGCAGCCCTGCGGTGTGGCGAGTTCTCTCTGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CAA 90 bp | ACCTCTGCAAAGGAGGAACATGTAGGGCAGGCTCGGTGCGGAGAAGGCCTGAGGTCCATTATGCCATCCTaGGCAGACTTGAGGATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TSAKEEHVGQARCGEGLRSIMPS*ADLRID Trigger: GTCTATCCTCAAGTCTGCCAAGGATGGCATAATGGA...CCTCAGGCCTTCTCCGCACCGAGCCTGCCCTACATGTTCCTCCTTTGCAGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CAA 90 bp | GAGGACCCCAGAAGGCTCTGCACCCCTAGTACATGTATAAAGCCAGGTGGAAGGGCCTCCAGCGACTTTTaGTGCATCCCCAGTAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: EDPRRLCTPSTCIKPGGRASSDF*CIPSSH Trigger: ATGGCTACTGGGGATGCACAAAAAGTCGCTGGAGGC...CCTTCCACCTGGCTTTATACATGTACTAGGGGTGCAGAGCCTTCTGGGGTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000021665.12 |
||
| CDS CCA 90 bp | ACAGGAATCCATTATGCCATCCTTGGCAGACTTGAGGATAGACTCTaGCAGGGGGATCGAGTGCCTCACCATGGCTCCATAGAGACCATA | + |
|
Preference number: 5 (lower is better) Translates to: TGIHYAILGRLEDRL*QGDRVPHHGSIETI Trigger: TATGGTCTCTATGGAGCCATGGTGAGGCACTCGATCCCCCTGCCAGAGTCTATCCTCAAGTCTGCCAAGGATGGCATAATGGATTCCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS CCA 90 bp | GCTTCTTGGTCTGGTTTAAAGCCGATTTGGACATTTTTCGGTCACTaGAGGAAACATCTTCGGAATCGGAGCTGGCCGTCTGGCTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ASWSGLKPIWTFFGH*RKHLRNRSWPSGWC Trigger: ACACCAGCCAGACGGCCAGCTCCGATTCCGAAGATGTTTCCTCCAGTGACCGAAAAATGTCCAAATCGGCTTTAAACCAGACCAAGAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
||
| CDS-3UTR CAA 90 bp | GAGGACCCCAGAAGGCTCTGCACCCCTAGTACATGTATAAAGCCAGGTGGAAGGGCCTCCAGCGACTTTTaGTGCATCCCTAAAAAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: EDPRRLCTPSTCIKPGGRASSDF*CIPKKN Trigger: ATTCTTTTTAGGGATGCACAAAAAGTCGCTGGAGGC...CCTTCCACCTGGCTTTATACATGTACTAGGGGTGCAGAGCCTTCTGGGGTCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000169934.4 |
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| CDS-3UTR CAA 90 bp | GAGGACCCCAGAAGGCTCTGCACCCCTAGTACATGTATAAAGCCAGGTGGAAGGTGGTTTAAAGCCGATTaGGACATTTTTCGGTCACTG | + |
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Preference number: 5 (lower is better) Translates to: EDPRRLCTPSTCIKPGGRWFKAD*DIFRSL Trigger: CAGTGACCGAAAAATGTCCAAATCGGCTTTAAACCA...CCTTCCACCTGGCTTTATACATGTACTAGGGGTGCAGAGCCTTCTGGGGTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CCA 90 bp | TGTGTCGCCGCTTCTTACGCTTCTTGGTCTGGTTTAAAGCCGATTTaGACATTTTTCGGTCACTGGAGGAAACATCTTCGGAATCGGAGC | + |
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Preference number: 5 (lower is better) Translates to: CVAASYASWSGLKPI*TFFGHWRKHLRNRS Trigger: GCTCCGATTCCGAAGATGTTTCCTCCAGTGACCGAAAAATGTCCAAATCGGCTTTAAACCAGACCAAGAAGCGTAAGAAGCGGCGACACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS-3UTR CAA 90 bp | TTGAGCTTTCCCCGTACCTTTCATGTTATACAGCGTGCGTGCATGCGTGCATGTTCCATTATGCCATCCTaGGCAGACTTGAGGATAGAC | + |
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Preference number: 5 (lower is better) Translates to: LSFPRTFHVIQRACMRACSIMPS*ADLRID Trigger: GTCTATCCTCAAGTCTGCCAAGGATGGCATAATGGA...ACATGCACGCATGCACGCACGCTGTATAACATGAAAGGTACGGGGAAAGCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CCA 90 bp | GAAGTAAAGATTGTCCTGTGTCGCCGCTTCTTACGCTTCTTGGTCTaGTTTAAAGCCGATTTGGACATTTTTCGGTCACTGGAGGAAACA | + |
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Preference number: 5 (lower is better) Translates to: EVKIVLCRRFLRFLV*FKADLDIFRSLEET Trigger: TGTTTCCTCCAGTGACCGAAAAATGTCCAAATCGGCTTTAAACCAGACCAAGAAGCGTAAGAAGCGGCGACACAGGACAATCTTTACTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS GCA 72 bp | CCTGCCGGGCTGAGAACGGAGCGCGCAGCTAACAAATaGCCAGGGGCCAGGCCGTCGAGGGCAGCCCGCGGG | + |
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Preference number: 6 (lower is better) Translates to: PAGLRTERAANK*PGARPSRAARG Trigger: CCCGCGGGCTGCCCTCGACGGCCTGGCCCCTGGGCATTTGTTAGCTGCGCGCTCCGTTCTCAGCCCGGCAGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS GCA 72 bp | TGGCCGTCTGGCTGGTGTCCAGCGGCCCCGACGCTCTaGCTAGTGGCTGCAAGTGGACGCTCTGCGGATCGG | + |
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Preference number: 6 (lower is better) Translates to: WPSGWCPAAPTL*LVAASGRSADR Trigger: CCGATCCGCAGAGCGTCCACTTGCAGCCACTAGGCAGAGCGTCGGGGCCGCTGGACACCAGCCAGACGGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CAA 90 bp | GAGATGGCTGCCTGGGCCTCTGGGGCCCGTTCCTCCTGCTCCATCTaGTCGAGCTTGGGCAGGGCCTGGCGTTCCACCTCGGGCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: EMAAWASGARSSCSI*SSLGRAWRSTSGFL Trigger: AAGGAAGCCCGAGGTGGAACGCCAGGCCCTGCCCAAGCTCGACAAGATGGAGCAGGAGGAACGGGCCCCAGAGGCCCAGGCAGCCATCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CCA 72 bp | GAGCTGGGAGGCTCCTTGTTCAAGCCTAGGATCTCCTaGATGCCGAACCCTGTGCACCTGGCCGGGGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: ELGGSLFKPRIS*MPNPVHLAGAP Trigger: GGGCGCCCCGGCCAGGTGCACAGGGTTCGGCATCCAGGAGATCCTAGGCTTGAACAAGGAGCCTCCCAGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CCA 72 bp | TCCAGCGGCCCCGACGCTCTGCCTAGTGGCTGCAAGTaGACGCTCTGCGGATCGGACAGCACTTCCAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SSGPDALPSGCK*TLCGSDSTSKK Trigger: CTTCTTGGAAGTGCTGTCCGATCCGCAGAGCGTCCACTTGCAGCCACTAGGCAGAGCGTCGGGGCCGCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CCA 72 bp | AGGAAACATCTTCGGAATCGGAGCTGGCCGTCTGGCTaGTGTCCAGCGGCCCCGACGCTCTGCCTAGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: RKHLRNRSWPSG*CPAAPTLCLVA Trigger: AGCCACTAGGCAGAGCGTCGGGGCCGCTGGACACCAGCCAGACGGCCAGCTCCGATTCCGAAGATGTTTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CCA 72 bp | TCCTCCTGCTCCATCTTGTCGAGCTTGGGCAGGGCCTaGCGTTCCACCTCGGGCTTCCTTCCCGACTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SSCSILSSLGRA*RSTSGFLPDSA Trigger: AGCTGAGTCGGGAAGGAAGCCCGAGGTGGAACGCCAGGCCCTGCCCAAGCTCGACAAGATGGAGCAGGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CCA 72 bp | CATGTCCTCCAGCTGCGGTGGGCTGAGCTTCTCAGCTaGCCTGTCTTCCTCCGTGGCGTCCTCTTCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: HVLQLRWAELLS*PVFLRGVLFFW Trigger: CCAGAAGAAGAGGACGCCACGGAGGAAGACAGGCCAGCTGAGAAGCTCAGCCCACCGCAGCTGGAGGACATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS TCA 72 bp | GCCTCACCATGGCTCCATAGAGACCATACTCAGCCATaGCGCTGCTCCGGCCCCAGCACTTCTCCCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: ASPWLHRDHTQP*RCSGPSTSPSS Trigger: GGAAGAGGGAGAAGTGCTGGGGCCGGAGCAGCGTCATGGCTGAGTATGGTCTCTATGGAGCCATGGTGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS GCA 72 bp | GGCTGTCAGGCCCAGATACAGTCCCCAGAACCTTGGTaGTGTGTTCCTGAGCTTTGGCTCGGAGGGCGGCAA | + |
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Preference number: 6 (lower is better) Translates to: GCQAQIQSPEPW*CVPELWLGGRQ Trigger: TTGCCGCCCTCCGAGCCAAAGCTCAGGAACACAGCACCAAGGTTCTGGGGACTGTATCTGGGCCTGACAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS TCA 72 bp | CCAGATACAGTCCCCAGAACCTTGGTGCTGTGTTCCTaGGCTTTGGCTCGGAGGGCGGCAATGCTGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: PDTVPRTLVLCS*ALARRAAMLFS Trigger: GGAGAACAGCATTGCCGCCCTCCGAGCCAAAGCTCAGGAACACAGCACCAAGGTTCTGGGGACTGTATCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS GCA 72 bp | TGCTGTGTTCCTGAGCTTTGGCTCGGAGGGCGGCAATaGTGTTCTCCCTCAGTTCTTCCTGGGAGATGGCTG | + |
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Preference number: 6 (lower is better) Translates to: CCVPELWLGGRQ*CSPSVLPGRWL Trigger: CAGCCATCTCCCAGGAAGAACTGAGGGAGAACAGCATTGCCGCCCTCCGAGCCAAAGCTCAGGAACACAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CCA 72 bp | CAGTCCCCAGAACCTTGGTGCTGTGTTCCTGAGCTTTaGCTCGGAGGGCGGCAATGCTGTTCTCCCTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: QSPEPWCCVPEL*LGGRQCCSPSV Trigger: AACTGAGGGAGAACAGCATTGCCGCCCTCCGAGCCAAAGCTCAGGAACACAGCACCAAGGTTCTGGGGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CCA 72 bp | CCGTGGCGTCCTCTTCTTCTGGCTTCTCAGCATTTCTaGCCAGGCTGTCAGGCCCAGATACAGTCCCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: PWRPLLLASQHF*PGCQAQIQSPE Trigger: TTCTGGGGACTGTATCTGGGCCTGACAGCCTGGCCAGAAATGCTGAGAAGCCAGAAGAAGAGGACGCCACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CAA 72 bp | GGGGCACAGGAATCCATTATGCCATCCTTGGCAGACTaGAGGATAGACTCTGGCAGGGGGATCGAGTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: GAQESIMPSLAD*RIDSGRGIECL Trigger: GAGGCACTCGATCCCCCTGCCAGAGTCTATCCTCAAGTCTGCCAAGGATGGCATAATGGATTCCTGTGCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CAA 90 bp | AGTAGCCATGGGGCACAGGAATCCATTATGCCATCCTTGGCAGACTaGAGGATAGACTCTGGCAGGGGGATCGAGTGCCTCACCATGGCT | + |
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Preference number: 6 (lower is better) Translates to: SSHGAQESIMPSLAD*RIDSGRGIECLTMA Trigger: AGCCATGGTGAGGCACTCGATCCCCCTGCCAGAGTCTATCCTCAAGTCTGCCAAGGATGGCATAATGGATTCCTGTGCCCCATGGCTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CCA 72 bp | CATTATGCCATCCTTGGCAGACTTGAGGATAGACTCTaGCAGGGGGATCGAGTGCCTCACCATGGCTCCATA | + |
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Preference number: 6 (lower is better) Translates to: HYAILGRLEDRL*QGDRVPHHGSI Trigger: TATGGAGCCATGGTGAGGCACTCGATCCCCCTGCCAGAGTCTATCCTCAAGTCTGCCAAGGATGGCATAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CAA 90 bp | CTGTGTCGCCGCTTCTTACGCTTCTTGGTCTGGTTTAAAGCCGATTaGGACATTTTTCGGTCACTGGAGGAAACATCTTCGGAATCGGAG | + |
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Preference number: 6 (lower is better) Translates to: LCRRFLRFLVWFKAD*DIFRSLEETSSESE Trigger: CTCCGATTCCGAAGATGTTTCCTCCAGTGACCGAAAAATGTCCAAATCGGCTTTAAACCAGACCAAGAAGCGTAAGAAGCGGCGACACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CCA 72 bp | TCTGGTTTAAAGCCGATTTGGACATTTTTCGGTCACTaGAGGAAACATCTTCGGAATCGGAGCTGGCCGTCT | + |
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Preference number: 6 (lower is better) Translates to: SGLKPIWTFFGH*RKHLRNRSWPS Trigger: AGACGGCCAGCTCCGATTCCGAAGATGTTTCCTCCAGTGACCGAAAAATGTCCAAATCGGCTTTAAACCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CAA 72 bp | TTCCTTCCCGACTCAGCTGCTGCCTCCAGCGACTTTTaGTGCATCCCTAAAAAGAATTGTTGGTATTCGGGT | + |
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Preference number: 6 (lower is better) Translates to: FLPDSAAASSDF*CIPKKNCWYSG Trigger: ACCCGAATACCAACAATTCTTTTTAGGGATGCACAAAAAGTCGCTGGAGGCAGCAGCTGAGTCGGGAAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169934.4 |
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| CDS CCA 72 bp | ATTGTCCTGTGTCGCCGCTTCTTACGCTTCTTGGTCTaGTTTAAAGCCGATTTGGACATTTTTCGGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: IVLCRRFLRFLV*FKADLDIFRSL Trigger: CAGTGACCGAAAAATGTCCAAATCGGCTTTAAACCAGACCAAGAAGCGTAAGAAGCGGCGACACAGGACAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CCA 72 bp | GCTTCTTACGCTTCTTGGTCTGGTTTAAAGCCGATTTaGACATTTTTCGGTCACTGGAGGAAACATCTTCGG | + |
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Preference number: 6 (lower is better) Translates to: ASYASWSGLKPI*TFFGHWRKHLR Trigger: CCGAAGATGTTTCCTCCAGTGACCGAAAAATGTCCAAATCGGCTTTAAACCAGACCAAGAAGCGTAAGAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CAA 72 bp | CGCTTCTTACGCTTCTTGGTCTGGTTTAAAGCCGATTaGGACATTTTTCGGTCACTGGAGGAAACATCTTCG | + |
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Preference number: 6 (lower is better) Translates to: RFLRFLVWFKAD*DIFRSLEETSS Trigger: CGAAGATGTTTCCTCCAGTGACCGAAAAATGTCCAAATCGGCTTTAAACCAGACCAAGAAGCGTAAGAAGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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| CDS CAA 72 bp | GTAAAGATTGTCCTGTGTCGCCGCTTCTTACGCTTCTaGGTCTGGTTTAAAGCCGATTTGGACATTTTTCGG | + |
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Preference number: 6 (lower is better) Translates to: VKIVLCRRFLRF*VWFKADLDIFR Trigger: CCGAAAAATGTCCAAATCGGCTTTAAACCAGACCAAGAAGCGTAAGAAGCGGCGACACAGGACAATCTTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021665.12 ENSMUST00000169934.4 |
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