Pregenerated sensors for VSTM5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031937Ensembl transcript IDs: ENSMUST00000034413.8
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCACATCGGCCCCTCTGCAGACACGCCGGCTCTGGAGACAGTAGCTaGTTCAGCAGGGCAATGTGGGACTGCAGTGTGGTAGCTGGTGCC | + |
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Preference number: 1 (lower is better) Translates to: AHRPLCRHAGSGDSS*FSRAMWDCSVVAGA Trigger: GGCACCAGCTACCACACTGCAGTCCCACATTGCCCTGCTGAAGCAGCTACTGTCTCCAGAGCCGGCGTGTCTGCAGAGGGGCCGATGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR CCA 90 bp | CCCTCCAGGCCCACGGTCAGCTTCTTTATCTGCCAGCTGTCTCACTaGGAAAGGGGTATGGGAGCTGCAGCAAGGATGGGCTCTGTTTGT | + |
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Preference number: 1 (lower is better) Translates to: PSRPTVSFFICQLSH*ERGMGAAARMGSVC Trigger: ACAAACAGAGCCCATCCTTGCTGCAGCTCCCATACCCCTTTCCCAGTGAGACAGCTGGCAGATAAAGAAGCTGACCGTGGGCCTGGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR CCA 90 bp | CTTTACCTCATCAGATTGTCAGAGCCTCAGGCTTGCTCACGTTTATaGGATATAACATGGGGAGGAGGACGGTGCCACCGTTTGCACATT | + |
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Preference number: 1 (lower is better) Translates to: LYLIRLSEPQACSRL*DITWGGGRCHRLHI Trigger: AATGTGCAAACGGTGGCACCGTCCTCCTCCCCATGTTATATCCCATAAACGTGAGCAAGCCTGAGGCTCTGACAATCTGATGAGGTAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCTGGGAGAACAGCAAGTGCTCTTAGGAGCTGAGCCTCCTTTCTCTCCAGTCAAGGGGTATGGGAGCTaGAGCAAGGATGGGCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: PLGEQQVLLGAEPPFSPVKGYGS*SKDGLC Trigger: ACAGAGCCCATCCTTGCTGCAGCTCCCATACCCCTT...GACTGGAGAGAAAGGAGGCTCAGCTCCTAAGAGCACTTGCTGTTCTCCCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR-3UTR CCA 90 bp | ACATATATGTGTGCACTGTGTGCATGCAATGCCCATGGGGGCCAGAAGAGCGAGGAGCTGCAGCAAGGATaGGCTCTGTTTGTTCCTTCG | + |
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Preference number: 2 (lower is better) Translates to: TYMCALCACNAHGGQKSEELQQG*ALFVPS Trigger: CGAAGGAACAAACAGAGCCCATCCTTGCTGCAGCTC...CTCGCTCTTCTGGCCCCCATGGGCATTGCATGCACACAGTGCACACATATATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR CAA 90 bp | CGAGGCATTCTGTGGAACCGGAGTTATACCATGTGGTTCATGGAATaGAGTCAGGGTCCTCTGGGAGAACAGCAAGTGCTCTTAGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: RGILWNRSYTMWFME*SQGPLGEQQVLLGA Trigger: AGCTCCTAAGAGCACTTGCTGTTCTCCCAGAGGACCCTGACTCAATTCCATGAACCACATGGTATAACTCCGGTTCCACAGAATGCCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCTCCAGCCCTCGCTTGCTTTGCTTAATGCCTCTGAGAGATCTAGGCTAATATGCCAGCTGTCTCACTaGGAAAGGGGTATGGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: SLQPSLALLNASERSRLICQLSH*ERGMGA Trigger: AGCTCCCATACCCCTTTCCCAGTGAGACAGCTGGCA...TATTAGCCTAGATCTCTCAGAGGCATTAAGCAAAGCAAGCGAGGGCTGGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR CAA 90 bp | GAGGTACAGTTCACTTTACCTCATCAGATTGTCAGAGCCTCAGGCTaGCTCACGTTTATGGGATATAACATGGGGAGGAGGACGGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: EVQFTLPHQIVRASG*LTFMGYNMGRRTVP Trigger: TGGCACCGTCCTCCTCCCCATGTTATATCCCATAAACGTGAGCAAGCCTGAGGCTCTGACAATCTGATGAGGTAAAGTGAACTGTACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGAATTGAGTCAGGGTCCTCTGGGAGAACAGCAAGTGCTCTTAGGAGCTGAGGTCAGCTTCTTTATCTaGCAGCTGTCTCACTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: MELSQGPLGEQQVLLGAEVSFFI*QLSHWE Trigger: TTCCCAGTGAGACAGCTGGCAGATAAAGAAGCTGAC...CTCAGCTCCTAAGAGCACTTGCTGTTCTCCCAGAGGACCCTGACTCAATTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGGCATTTTAACCTTTGTTATGCAATATTGCACTTTCTCAACTAACTTTCCAGAGCTGGGCCCTTTGTaGACTCAACTGCTCCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: QGILTFVMQYCTFSTNFPELGPL*TQLLPV Trigger: CACAGGGAGCAGTTGAGTGCACAAAGGGCCCAGCTC...TGGAAAGTTAGTTGAGAAAGTGCAATATTGCATAACAAAGGTTAAAATGCCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR CAA 90 bp | GCTGAAACCAAGGAAAGTTCCTGGTTGAAAGTCTCAGATGTTGCTTaGAACTACAGGCGACTCCTAGAACTGGCTTATATAAGTAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: AETKESSWLKVSDVA*NYRRLLELAYISKP Trigger: TGGCTTACTTATATAAGCCAGTTCTAGGAGTCGCCTGTAGTTCAAAGCAACATCTGAGACTTTCAACCAGGAACTTTCCTTGGTTTCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR GCA 72 bp | CCCCTCTGCAGACACGCCGGCTCTGGAGACAGTAGCTaGTTCAGCAGGGCAATGTGGGACTGCAGTGTGGTA | + |
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Preference number: 3 (lower is better) Translates to: PLCRHAGSGDSS*FSRAMWDCSVV Trigger: TACCACACTGCAGTCCCACATTGCCCTGCTGAAGCAGCTACTGTCTCCAGAGCCGGCGTGTCTGCAGAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR GCA 72 bp | GCCATCCCCTCCAGGCCCACGGTCAGCTTCTTTATCTaGCAGCTGTCTCACTGGGAAAGGGGTATGGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: AIPSRPTVSFFI*QLSHWERGMGA Trigger: AGCTCCCATACCCCTTTCCCAGTGAGACAGCTGGCAGATAAAGAAGCTGACCGTGGGCCTGGAGGGGATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR CCA 72 bp | CCCACGGTCAGCTTCTTTATCTGCCAGCTGTCTCACTaGGAAAGGGGTATGGGAGCTGCAGCAAGGATGGGC | + |
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Preference number: 3 (lower is better) Translates to: PTVSFFICQLSH*ERGMGAAARMG Trigger: GCCCATCCTTGCTGCAGCTCCCATACCCCTTTCCCAGTGAGACAGCTGGCAGATAAAGAAGCTGACCGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR-3UTR CAA 90 bp | CCTCTGGGAGAACAGCAAGTGCTCTTAGGAGCTGAGCCTCCTTTCTCTCCAGTCGGACGGTGCCACCGTTaGCACATTAGACAGGAGCAC | + |
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Preference number: 3 (lower is better) Translates to: PLGEQQVLLGAEPPFSPVGRCHR*HIRQEH Trigger: GTGCTCCTGTCTAATGTGCAAACGGTGGCACCGTCC...GACTGGAGAGAAAGGAGGCTCAGCTCCTAAGAGCACTTGCTGTTCTCCCAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR GCA 72 bp | CTGCCAGCTGTCTCACTGGGAAAGGGGTATGGGAGCTaGAGCAAGGATGGGCTCTGTTTGTTCCTTCGACTG | + |
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Preference number: 3 (lower is better) Translates to: LPAVSLGKGYGS*SKDGLCLFLRL Trigger: CAGTCGAAGGAACAAACAGAGCCCATCCTTGCTGCAGCTCCCATACCCCTTTCCCAGTGAGACAGCTGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR GCA 72 bp | CAGCAGGGCAATGTGGGACTGCAGTGTGGTAGCTGGTaGCTGCCTGTTTTAAGGGTTAGCATGGCCCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: QQGNVGLQCGSW*LPVLRVSMALK Trigger: CTTCAGGGCCATGCTAACCCTTAAAACAGGCAGGCACCAGCTACCACACTGCAGTCCCACATTGCCCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR GCA 72 bp | GTTTGCTGCTCCCTGTGCCCAGAGCTGGGCCCTTTGTaGACTCAACTGCTCCCTGTGAGGTACAGTTCACTT | + |
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Preference number: 3 (lower is better) Translates to: VCCSLCPELGPL*TQLLPVRYSSL Trigger: AAGTGAACTGTACCTCACAGGGAGCAGTTGAGTGCACAAAGGGCCCAGCTCTGGGCACAGGGAGCAGCAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR CCA 72 bp | CTTCAGCAGGGCAATGTGGGACTGCAGTGTGGTAGCTaGTGCCTGCCTGTTTTAAGGGTTAGCATGGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: LQQGNVGLQCGS*CLPVLRVSMAL Trigger: CAGGGCCATGCTAACCCTTAAAACAGGCAGGCACCAGCTACCACACTGCAGTCCCACATTGCCCTGCTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR GCA 72 bp | TCACGTTTATGGGATATAACATGGGGAGGAGGACGGTaGCACCGTTTGCACATTAGACAGGAGCACAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: SRLWDITWGGGR*HRLHIRQEHRG Trigger: GCCTCTGTGCTCCTGTCTAATGTGCAAACGGTGGCACCGTCCTCCTCCCCATGTTATATCCCATAAACGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR CCA 72 bp | TCTTTATCTGCCAGCTGTCTCACTGGGAAAGGGGTATaGGAGCTGCAGCAAGGATGGGCTCTGTTTGTTCCT | + |
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Preference number: 3 (lower is better) Translates to: SLSASCLTGKGV*ELQQGWALFVP Trigger: AGGAACAAACAGAGCCCATCCTTGCTGCAGCTCCCATACCCCTTTCCCAGTGAGACAGCTGGCAGATAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR CCA 72 bp | GAGCCTCAGGCTTGCTCACGTTTATGGGATATAACATaGGGAGGAGGACGGTGCCACCGTTTGCACATTAGA | + |
|
Preference number: 3 (lower is better) Translates to: EPQACSRLWDIT*GGGRCHRLHIR Trigger: TCTAATGTGCAAACGGTGGCACCGTCCTCCTCCCCATGTTATATCCCATAAACGTGAGCAAGCCTGAGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR CCA 72 bp | ATCAGATTGTCAGAGCCTCAGGCTTGCTCACGTTTATaGGATATAACATGGGGAGGAGGACGGTGCCACCGT | + |
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Preference number: 3 (lower is better) Translates to: IRLSEPQACSRL*DITWGGGRCHR Trigger: ACGGTGGCACCGTCCTCCTCCCCATGTTATATCCCATAAACGTGAGCAAGCCTGAGGCTCTGACAATCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR TCA 72 bp | CAGAGCTGGGCCCTTTGTGCACTCAACTGCTCCCTGTaGGGTACAGTTCACTTTACCTCATCAGATTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: QSWALCALNCSL*GTVHFTSSDCQ Trigger: CTGACAATCTGATGAGGTAAAGTGAACTGTACCTCACAGGGAGCAGTTGAGTGCACAAAGGGCCCAGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR CCA 72 bp | CTCACTGGGAAAGGGGTATGGGAGCTGCAGCAAGGATaGGCTCTGTTTGTTCCTTCGACTGGAAAATACTGT | + |
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Preference number: 3 (lower is better) Translates to: LTGKGVWELQQG*ALFVPSTGKYC Trigger: ACAGTATTTTCCAGTCGAAGGAACAAACAGAGCCCATCCTTGCTGCAGCTCCCATACCCCTTTCCCAGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR CCA 72 bp | GAGCGAGGCATTCTGTGGAACCGGAGTTATACCATGTaGTTCATGGAATTGAGTCAGGGTCCTCTGGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: ERGILWNRSYTM*FMELSQGPLGE Trigger: TTCTCCCAGAGGACCCTGACTCAATTCCATGAACCACATGGTATAACTCCGGTTCCACAGAATGCCTCGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR TCA 72 bp | TGTGGAACCGGAGTTATACCATGTGGTTCATGGAATTaGGTCAGGGTCCTCTGGGAGAACAGCAAGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: CGTGVIPCGSWN*VRVLWENSKCS Trigger: AGAGCACTTGCTGTTCTCCCAGAGGACCCTGACTCAATTCCATGAACCACATGGTATAACTCCGGTTCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR GCA 72 bp | TGTTTTACCATCACATATATGTGTGCACTGTGTGCATaGAATGCCCATGGGGGCCAGAAGAGCGAGGCATTC | + |
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Preference number: 3 (lower is better) Translates to: CFTITYMCALCA*NAHGGQKSEAF Trigger: GAATGCCTCGCTCTTCTGGCCCCCATGGGCATTGCATGCACACAGTGCACACATATATGTGATGGTAAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR GCA 72 bp | TCACTTTACCTCATCAGATTGTCAGAGCCTCAGGCTTaGTCACGTTTATGGGATATAACATGGGGAGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: SLYLIRLSEPQA*SRLWDITWGGG Trigger: TCCTCCTCCCCATGTTATATCCCATAAACGTGAGCAAGCCTGAGGCTCTGACAATCTGATGAGGTAAAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR TCA 72 bp | AGTAACCCAAGTTTAGGCTACTCAGGTAACTTCGTATaGGGGAGGATGAGATTGATGTTTGCTGCTCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: SNPSLGYSGNFV*GRMRLMFAAPC Trigger: ACAGGGAGCAGCAAACATCAATCTCATCCTCCCTCATACGAAGTTACCTGAGTAGCCTAAACTTGGGTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR GCA 72 bp | AACCAAGGAAAGTTCCTGGTTGAAAGTCTCAGATGTTaGTTTGAACTACAGGCGACTCCTAGAACTGGCTTA | + |
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Preference number: 3 (lower is better) Translates to: NQGKFLVESLRC*FELQATPRTGL Trigger: TAAGCCAGTTCTAGGAGTCGCCTGTAGTTCAAAGCAACATCTGAGACTTTCAACCAGGAACTTTCCTTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS-3UTR GCA 90 bp | AGCTGTCTCACTGGGAAAGGGGTATGGGAGCTGCAGCAAGGATGGGCTCTGTTTTGGCTGCTCCCCGGATaGTCTGTGACAGTGACGATG | + |
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Preference number: 4 (lower is better) Translates to: SCLTGKGVWELQQGWALFWLLPG*SVTVTM Trigger: CATCGTCACTGTCACAGAGCATCCGGGGAGCAGCCA...AAACAGAGCCCATCCTTGCTGCAGCTCCCATACCCCTTTCCCAGTGAGACAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS-3UTR CCA 90 bp | CTCCTAGAACTGGCTTATATAAGTAAGCCATCCCCTCCAGGCCCACGGTCAGCTACACACGCAGCAAGATaGTGCCAGACTGGCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LLELAYISKPSPPGPRSATHAAR*CQTGCS Trigger: GGAGCAGCCAGTCTGGCACCATCTTGCTGCGTGTGT...AGCTGACCGTGGGCCTGGAGGGGATGGCTTACTTATATAAGCCAGTTCTAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR CAA 72 bp | TGGGATATAACATGGGGAGGAGGACGGTGCCACCGTTaGCACATTAGACAGGAGCACAGAGGCACGGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: WDITWGGGRCHR*HIRQEHRGTES Trigger: GCTTTCCGTGCCTCTGTGCTCCTGTCTAATGTGCAAACGGTGGCACCGTCCTCCTCCCCATGTTATATCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR CAA 72 bp | CTCCTCTGCCTGGGACCTGACTGGGGACCTGAAGTGTaGCTGATCGAATGGATGAAGCCGTACAGATTCTAC | + |
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Preference number: 4 (lower is better) Translates to: LLCLGPDWGPEV*LIEWMKPYRFY Trigger: GTAGAATCTGTACGGCTTCATCCATTCGATCAGCAACACTTCAGGTCCCCAGTCAGGTCCCAGGCAGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS-3UTR CCA 90 bp | GCATCTCTCCAGCCCTCGCTTGCTTTGCTTAATGCCTCTGAGAGATCTAGGCTAATTGGCTGGGGTCCCTaGTTTCCACTCCACGATCCT | + |
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Preference number: 4 (lower is better) Translates to: ASLQPSLALLNASERSRLIGWGP*FPLHDP Trigger: AGGATCGTGGAGTGGAAACCAGGGACCCCAGCCAAT...TAGCCTAGATCTCTCAGAGGCATTAAGCAAAGCAAGCGAGGGCTGGAGAGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS-3UTR TCA 90 bp | CTCCTAGAACTGGCTTATATAAGTAAGCCATCCCCTCCAGGCCCACGGTCAGCTCAGTGGTGCTTTCTTTaGGTTTGTACCTCCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LLELAYISKPSPPGPRSAQWCFL*VCTSSS Trigger: GGAAGAGGAGGTACAAACTCAAAGAAAGCACCACTG...AGCTGACCGTGGGCCTGGAGGGGATGGCTTACTTATATAAGCCAGTTCTAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR CAA 72 bp | CTGTGGAACCGGAGTTATACCATGTGGTTCATGGAATaGAGTCAGGGTCCTCTGGGAGAACAGCAAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: LWNRSYTMWFME*SQGPLGEQQVL Trigger: GAGCACTTGCTGTTCTCCCAGAGGACCCTGACTCAATTCCATGAACCACATGGTATAACTCCGGTTCCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS-3UTR CCA 90 bp | CTGCAGCAAGGATGGGCTCTGTTTGTTCCTTCGACTGGAAAATACTGTTTTTCTTTGGGAGACATTGGCTaGGGTCCCTGGTTTCCACTC | + |
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Preference number: 4 (lower is better) Translates to: LQQGWALFVPSTGKYCFSLGDIG*GPWFPL Trigger: GAGTGGAAACCAGGGACCCCAGCCAATGTCTCCCAA...AGAAAAACAGTATTTTCCAGTCGAAGGAACAAACAGAGCCCATCCTTGCTGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR CAA 72 bp | CTCCCTGTGAGGTACAGTTCACTTTACCTCATCAGATaGTCAGAGCCTCAGGCTTGCTCACGTTTATGGGAT | + |
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Preference number: 4 (lower is better) Translates to: LPVRYSSLYLIR*SEPQACSRLWD Trigger: ATCCCATAAACGTGAGCAAGCCTGAGGCTCTGACAATCTGATGAGGTAAAGTGAACTGTACCTCACAGGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR CAA 72 bp | CATGGCCCTGAAGCTGAAACCAAGGAAAGTTCCTGGTaGAAAGTCTCAGATGTTGCTTTGAACTACAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: HGPEAETKESSW*KVSDVALNYRR Trigger: TCGCCTGTAGTTCAAAGCAACATCTGAGACTTTCAACCAGGAACTTTCCTTGGTTTCAGCTTCAGGGCCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR CAA 72 bp | TTCACTTTACCTCATCAGATTGTCAGAGCCTCAGGCTaGCTCACGTTTATGGGATATAACATGGGGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: FTLPHQIVRASG*LTFMGYNMGRR Trigger: CCTCCTCCCCATGTTATATCCCATAAACGTGAGCAAGCCTGAGGCTCTGACAATCTGATGAGGTAAAGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS-3UTR TCA 90 bp | CTGCAGCAAGGATGGGCTCTGTTTGTTCCTTCGACTGGAAAATACTGTTTTTCTAATTTATACGCACACTaGTTGCAAACCCACATGAGG | + |
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Preference number: 4 (lower is better) Translates to: LQQGWALFVPSTGKYCFSNLYAH*LQTHMR Trigger: CCTCATGTGGGTTTGCAATCAGTGTGCGTATAAATT...AGAAAAACAGTATTTTCCAGTCGAAGGAACAAACAGAGCCCATCCTTGCTGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| 3UTR CAA 72 bp | AAGGAAAGTTCCTGGTTGAAAGTCTCAGATGTTGCTTaGAACTACAGGCGACTCCTAGAACTGGCTTATATA | + |
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Preference number: 4 (lower is better) Translates to: KESSWLKVSDVA*NYRRLLELAYI Trigger: TATATAAGCCAGTTCTAGGAGTCGCCTGTAGTTCAAAGCAACATCTGAGACTTTCAACCAGGAACTTTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS-3UTR GCA 90 bp | TTATGCAATATTGCACTTTCTCAACTAACTTTCCAGATCCTTCAATGGTTTGCAAGCCATTGTCAAAGGTaGAGACTCTGTCTCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LCNIALSQLTFQILQWFASHCQR*RLCLCG Trigger: GCCACAGAGACAGAGTCTGCACCTTTGACAATGGCT...TGCAAACCATTGAAGGATCTGGAAAGTTAGTTGAGAAAGTGCAATATTGCATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS GCA 90 bp | TGGGAGACATTGGCTGGGGTCCCTGGTTTCCACTCCACGATCCTCTaGACACCCCAGTTAGGAGTGTACTTCCACTCAATAGTGGGCACG | + |
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Preference number: 5 (lower is better) Translates to: WETLAGVPGFHSTIL*TPQLGVYFHSIVGT Trigger: CGTGCCCACTATTGAGTGGAAGTACACTCCTAACTGGGGTGTGCAGAGGATCGTGGAGTGGAAACCAGGGACCCCAGCCAATGTCTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS CCA 90 bp | GCAGACTCTGTCTCTGTGGCTTTGGGAGACATTGGCTGGGGTCCCTaGTTTCCACTCCACGATCCTCTGCACACCCCAGTTAGGAGTGTA | + |
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Preference number: 5 (lower is better) Translates to: ADSVSVALGDIGWGP*FPLHDPLHTPVRSV Trigger: TACACTCCTAACTGGGGTGTGCAGAGGATCGTGGAGTGGAAACCAGGGACCCCAGCCAATGTCTCCCAAAGCCACAGAGACAGAGTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS CCA 90 bp | TGGATGGAGCCATTGTCAAAGGTGCAGACTCTGTCTCTGTGGCTTTaGGAGACATTGGCTGGGGTCCCTGGTTTCCACTCCACGATCCTC | + |
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Preference number: 5 (lower is better) Translates to: WMEPLSKVQTLSLWL*ETLAGVPGFHSTIL Trigger: GAGGATCGTGGAGTGGAAACCAGGGACCCCAGCCAATGTCTCCCAAAGCCACAGAGACAGAGTCTGCACCTTTGACAATGGCTCCATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS CCA 90 bp | AAAAGCTGGATGGAGCCATTGTCAAAGGTGCAGACTCTGTCTCTGTaGCTTTGGGAGACATTGGCTGGGGTCCCTGGTTTCCACTCCACG | + |
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Preference number: 5 (lower is better) Translates to: KSWMEPLSKVQTLSL*LWETLAGVPGFHST Trigger: CGTGGAGTGGAAACCAGGGACCCCAGCCAATGTCTCCCAAAGCCACAGAGACAGAGTCTGCACCTTTGACAATGGCTCCATCCAGCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS-3UTR CAA 90 bp | ACATATATGTGTGCACTGTGTGCATGCAATGCCCATGGGGGCCAGAAGAGCGAGTCTGTCTCTGTGGCTTaGGGAGACATTGGCTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: TYMCALCACNAHGGQKSESVSVA*GDIGWG Trigger: ACCCCAGCCAATGTCTCCCAAAGCCACAGAGACAGA...CTCGCTCTTCTGGCCCCCATGGGCATTGCATGCACACAGTGCACACATATATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS-3UTR CAA 90 bp | TGGGAGCTGCAGCAAGGATGGGCTCTGTTTGTTCCTTCGACTGGAAAATACTGTTGGCTTTGGGAGACATaGGCTGGGGTCCCTGGTTTC | + |
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Preference number: 5 (lower is better) Translates to: WELQQGWALFVPSTGKYCWLWET*AGVPGF Trigger: GAAACCAGGGACCCCAGCCAATGTCTCCCAAAGCCA...ACAGTATTTTCCAGTCGAAGGAACAAACAGAGCCCATCCTTGCTGCAGCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS-3UTR CAA 90 bp | CAGATTGTCAGAGCCTCAGGCTTGCTCACGTTTATGGGATATAACATGGGGAGGAGCTGGATGGAGCCATaGTCAAAGGTGCAGACTCTG | + |
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Preference number: 5 (lower is better) Translates to: QIVRASGLLTFMGYNMGRSWMEP*SKVQTL Trigger: CAGAGTCTGCACCTTTGACAATGGCTCCATCCAGCT...CCTCCCCATGTTATATCCCATAAACGTGAGCAAGCCTGAGGCTCTGACAATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS-3UTR CAA 90 bp | ATAACATGGGGAGGAGGACGGTGCCACCGTTTGCACATTAGACAGGAGCACAGATCAGTGGTGCTTTCTTaGAGTTTGTACCTCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: ITWGGGRCHRLHIRQEHRSVVLS*SLYLLF Trigger: GAAGAGGAGGTACAAACTCAAAGAAAGCACCACTGA...TCTGTGCTCCTGTCTAATGTGCAAACGGTGGCACCGTCCTCCTCCCCATGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS-3UTR CAA 90 bp | GCATCTCTCCAGCCCTCGCTTGCTTTGCTTAATGCCTCTGAGAGATCTAGGCTAGTGCTTTCTTTGAGTTaGTACCTCCTCTTCCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: ASLQPSLALLNASERSRLVLSLS*YLLFLW Trigger: CCAAAGGAAGAGGAGGTACAAACTCAAAGAAAGCAC...TAGCCTAGATCTCTCAGAGGCATTAAGCAAAGCAAGCGAGGGCTGGAGAGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS-3UTR CAA 90 bp | TCTCTCCAGCCCTCGCTTGCTTTGCTTAATGCCTCTGAGAGATCTAGGCTAATATCCTTCACACTCACATaGAAAAGCTGGATGGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: SLQPSLALLNASERSRLISFTLT*KSWMEP Trigger: TGGCTCCATCCAGCTTTTCAATGTGAGTGTGAAGGA...TATTAGCCTAGATCTCTCAGAGGCATTAAGCAAAGCAAGCGAGGGCTGGAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS-3UTR CAA 90 bp | CTGGCTTATATAAGTAAGCCATCCCCTCCAGGCCCACGGTCAGCTTCTTTATCTGTACCTCCTCTTCCTTaGGAATTTATACGCACACTG | + |
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Preference number: 5 (lower is better) Translates to: LAYISKPSPPGPRSASLSVPPLP*EFIRTL Trigger: CAGTGTGCGTATAAATTCCAAAGGAAGAGGAGGTAC...AGATAAAGAAGCTGACCGTGGGCCTGGAGGGGATGGCTTACTTATATAAGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS TCA 90 bp | TCTTTGAGTTTGTACCTCCTCTTCCTTTGGAATTTATACGCACACTaGTTGCAAACCCACATGAGGCTGATTAGCACCACAGCCACGGCA | + |
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Preference number: 5 (lower is better) Translates to: SLSLYLLFLWNLYAH*LQTHMRLISTTATA Trigger: TGCCGTGGCTGTGGTGCTAATCAGCCTCATGTGGGTTTGCAATCAGTGTGCGTATAAATTCCAAAGGAAGAGGAGGTACAAACTCAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS GCA 72 bp | GCCGACTGTGGAATGTACAGTGACACCCCCTGGCTCTaGAGACAGCGGGCAGCAGTCACCCAGAACGCGAGC | + |
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Preference number: 6 (lower is better) Translates to: ADCGMYSDTPWL*RQRAAVTQNAS Trigger: GCTCGCGTTCTGGGTGACTGCTGCCCGCTGTCTGCAGAGCCAGGGGGTGTCACTGTACATTCCACAGTCGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS TCA 72 bp | GACAGTGGCGTTGATGGCCGACTGTGGAATGTACAGTaGCACCCCCTGGCTCTGCAGACAGCGGGCAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: DSGVDGRLWNVQ*HPLALQTAGSS Trigger: ACTGCTGCCCGCTGTCTGCAGAGCCAGGGGGTGTCACTGTACATTCCACAGTCGGCCATCAACGCCACTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS CAA 90 bp | CTGGATGGAGCCATTGTCAAAGGTGCAGACTCTGTCTCTGTGGCTTaGGGAGACATTGGCTGGGGTCCCTGGTTTCCACTCCACGATCCT | + |
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Preference number: 6 (lower is better) Translates to: LDGAIVKGADSVSVA*GDIGWGPWFPLHDP Trigger: AGGATCGTGGAGTGGAAACCAGGGACCCCAGCCAATGTCTCCCAAAGCCACAGAGACAGAGTCTGCACCTTTGACAATGGCTCCATCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS CCA 72 bp | CCATTGTCAAAGGTGCAGACTCTGTCTCTGTGGCTTTaGGAGACATTGGCTGGGGTCCCTGGTTTCCACTCC | + |
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Preference number: 6 (lower is better) Translates to: PLSKVQTLSLWL*ETLAGVPGFHS Trigger: GGAGTGGAAACCAGGGACCCCAGCCAATGTCTCCCAAAGCCACAGAGACAGAGTCTGCACCTTTGACAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS CAA 72 bp | GCCATTGTCAAAGGTGCAGACTCTGTCTCTGTGGCTTaGGGAGACATTGGCTGGGGTCCCTGGTTTCCACTC | + |
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Preference number: 6 (lower is better) Translates to: AIVKGADSVSVA*GDIGWGPWFPL Trigger: GAGTGGAAACCAGGGACCCCAGCCAATGTCTCCCAAAGCCACAGAGACAGAGTCTGCACCTTTGACAATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS GCA 72 bp | TTGGCTGGGGTCCCTGGTTTCCACTCCACGATCCTCTaGACACCCCAGTTAGGAGTGTACTTCCACTCAATA | + |
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Preference number: 6 (lower is better) Translates to: LAGVPGFHSTIL*TPQLGVYFHSI Trigger: TATTGAGTGGAAGTACACTCCTAACTGGGGTGTGCAGAGGATCGTGGAGTGGAAACCAGGGACCCCAGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS CCA 72 bp | ATGGAGCCATTGTCAAAGGTGCAGACTCTGTCTCTGTaGCTTTGGGAGACATTGGCTGGGGTCCCTGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: MEPLSKVQTLSL*LWETLAGVPGF Trigger: GAAACCAGGGACCCCAGCCAATGTCTCCCAAAGCCACAGAGACAGAGTCTGCACCTTTGACAATGGCTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS TCA 72 bp | CCACTGACAACAGGATATCTTGTTGGACAGTGGCGTTaGTGGCCGACTGTGGAATGTACAGTGACACCCCCT | + |
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Preference number: 6 (lower is better) Translates to: PLTTGYLVGQWR*WPTVECTVTPP Trigger: AGGGGGTGTCACTGTACATTCCACAGTCGGCCATCAACGCCACTGTCCAACAAGATATCCTGTTGTCAGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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| CDS TCA 72 bp | TTGTACCTCCTCTTCCTTTGGAATTTATACGCACACTaGTTGCAAACCCACATGAGGCTGATTAGCACCACA | + |
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Preference number: 6 (lower is better) Translates to: LYLLFLWNLYAH*LQTHMRLISTT Trigger: TGTGGTGCTAATCAGCCTCATGTGGGTTTGCAATCAGTGTGCGTATAAATTCCAAAGGAAGAGGAGGTACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034413.8 |
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