Pregenerated sensors for VSTM2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039257Ensembl transcript IDs: ENSMUST00000044705.12, ENSMUST00000186352.2, ENSMUST00000205845.2, ENSMUST00000206223.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CACTCTCCCTTGACAGGCTGGGCAGGTATTCTCATCTGCTCTCCGTaGCCCAGCCAGGTGTCCCGAGATGCCTTTCTTCCATGCCAGGGG | + |
Preference number: 1 (lower is better) Translates to: HSPLTGWAGILICSP*PSQVSRDAFLPCQG Trigger: CCCCTGGCATGGAAGAAAGGCATCTCGGGACACCTGGCTGGGCCACGGAGAGCAGATGAGAATACCTGCCCAGCCTGTCAAGGGAGAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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3UTR GCA 90 bp | ATATCTCAGAGGGTAGAAGACATCTGTAGGTGCAAGGTAAGAGAGTaGAAGAGATTAGCCATCTTTCCAGACTCCCTTTTTGAGGATCAG | + |
Preference number: 1 (lower is better) Translates to: ISQRVEDICRCKVRE*KRLAIFPDSLFEDQ Trigger: CTGATCCTCAAAAAGGGAGTCTGGAAAGATGGCTAATCTCTTGCACTCTCTTACCTTGCACCTACAGATGTCTTCTACCCTCTGAGATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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3UTR TCA 90 bp | TTTACATACTATCCTCAAGGGACTTGCTCAAGAGTTCGTGCAAAATaGAGATTCAGAGGGAATGTGGAGGAAAGAAAAATACATTGCCGT | + |
Preference number: 1 (lower is better) Translates to: FTYYPQGTCSRVRAK*RFRGNVEERKIHCR Trigger: ACGGCAATGTATTTTTCTTTCCTCCACATTCCCTCTGAATCTTCATTTTGCACGAACTCTTGAGCAAGTCCCTTGAGGATAGTATGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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3UTR-3UTR GCA 90 bp | AGAGGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACTTGGCGCCCCAGGTGTCCTCCCAGGGTaGCTGCTGAGGTTTGACGGC | + |
Preference number: 2 (lower is better) Translates to: RGNVEERKIHCREELGAPGVLPG*LLRFDG Trigger: GCCGTCAAACCTCAGCAGGCACCCTGGGAGGACACC...TGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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3UTR-3UTR GCA 90 bp | GGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACTTGGCGCCCCATGCGCATGGACTTCTTCATaGTTCCCTCAGTCCCTGTGT | + |
Preference number: 2 (lower is better) Translates to: GNVEERKIHCREELGAPCAWTSS*FPQSLC Trigger: ACACAGGGACTGAGGGAAGCATGAAGAAGTCCATGC...GCATGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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3UTR-3UTR GCA 90 bp | TACCGGGGCCTAATTGTATCTCTGAGACATACAACTTATCCCCAACTCATATCTGATGCCTTTCTTCCATaGCAGGGGCCCAACAGATGC | + |
Preference number: 2 (lower is better) Translates to: YRGLIVSLRHTTYPQLISDAFLP*QGPNRC Trigger: GCATCTGTTGGGCCCCTGGCATGGAAGAAAGGCATC...AGATATGAGTTGGGGATAAGTTGTATGTCTCAGAGATACAATTAGGCCCCGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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3UTR-3UTR CCA 90 bp | AATGAAGATTCAGAGGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACGTCCCTGTGTCCATGTaGCAAGGTGTCCTCCCAGGG | + |
Preference number: 2 (lower is better) Translates to: NEDSEGMWRKEKYIAVKNVPVSM*QGVLPG Trigger: CCCTGGGAGGACACCTTGCCACATGGACACAGGGAC...GTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCCTCTGAATCTTCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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3UTR-3UTR GCA 90 bp | TCTGAGACATACAACTTATCCCCAACTCATATCTCAGAGGGTAGAAGACATCTGGCATGGACTTCTTCATaGTTCCCTCAGTCCCTGTGT | + |
Preference number: 2 (lower is better) Translates to: SETYNLSPTHISEGRRHLAWTSS*FPQSLC Trigger: ACACAGGGACTGAGGGAAGCATGAAGAAGTCCATGC...CAGATGTCTTCTACCCTCTGAGATATGAGTTGGGGATAAGTTGTATGTCTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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3UTR-3UTR TCA 90 bp | TCTGAGACATACAACTTATCCCCAACTCATATCTCAGAGGGTAGAAGACATCTGAGAGTTCGTGCAAAATaGAGATTCAGAGGGAATGTG | + |
Preference number: 2 (lower is better) Translates to: SETYNLSPTHISEGRRHLRVRAK*RFRGNV Trigger: CACATTCCCTCTGAATCTTCATTTTGCACGAACTCT...CAGATGTCTTCTACCCTCTGAGATATGAGTTGGGGATAAGTTGTATGTCTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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3UTR-3UTR GCA 90 bp | TCTGAGACATACAACTTATCCCCAACTCATATCTCAGAGGGTAGAAGACATCTGGAAAGAAAAATACATTaGCGTGAAGAACTTGGCGCC | + |
Preference number: 2 (lower is better) Translates to: SETYNLSPTHISEGRRHLERKIH*REELGA Trigger: GGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTTC...CAGATGTCTTCTACCCTCTGAGATATGAGTTGGGGATAAGTTGTATGTCTCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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3UTR-3UTR CCA 90 bp | GAGGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACTTGGCGCCCCATGCACCCCATCCTATTTaGAAAATTGATGCATTATTT | + |
Preference number: 2 (lower is better) Translates to: EGMWRKEKYIAVKNLAPHAPHPI*KIDALF Trigger: AAATAATGCATCAATTTTCCAAATAGGATGGGGTGC...ATGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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3UTR GCA 72 bp | CACTCTCCCTTGACAGGCTGGGCAGGTATTCTCATCTaGTCTCCGTGGCCCAGCCAGGTGTCCCGAGATGCC | + |
Preference number: 3 (lower is better) Translates to: HSPLTGWAGILI*SPWPSQVSRDA Trigger: GGCATCTCGGGACACCTGGCTGGGCCACGGAGAGCAGATGAGAATACCTGCCCAGCCTGTCAAGGGAGAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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3UTR TCA 72 bp | CCTTTCTTCCATGCCAGGGGCCCAACAGATGCTGTCTaGGAAGAGAAGGCCACAGTGTCTGGCTCCAGCAGG | + |
Preference number: 3 (lower is better) Translates to: PFFHARGPTDAV*EEKATVSGSSR Trigger: CCTGCTGGAGCCAGACACTGTGGCCTTCTCTTCTCAGACAGCATCTGTTGGGCCCCTGGCATGGAAGAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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3UTR GCA 72 bp | TGGCCCAGCCAGGTGTCCCGAGATGCCTTTCTTCCATaGCAGGGGCCCAACAGATGCTGTCTGAGAAGAGAA | + |
Preference number: 3 (lower is better) Translates to: WPSQVSRDAFLP*QGPNRCCLRRE Trigger: TTCTCTTCTCAGACAGCATCTGTTGGGCCCCTGGCATGGAAGAAAGGCATCTCGGGACACCTGGCTGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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3UTR CCA 72 bp | TTGACAGGCTGGGCAGGTATTCTCATCTGCTCTCCGTaGCCCAGCCAGGTGTCCCGAGATGCCTTTCTTCCA | + |
Preference number: 3 (lower is better) Translates to: LTGWAGILICSP*PSQVSRDAFLP Trigger: TGGAAGAAAGGCATCTCGGGACACCTGGCTGGGCCACGGAGAGCAGATGAGAATACCTGCCCAGCCTGTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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3UTR CCA 72 bp | GACTTCTTCATGCTTCCCTCAGTCCCTGTGTCCATGTaGCAAGGTGTCCTCCCAGGGTGCCTGCTGAGGTTT | + |
Preference number: 3 (lower is better) Translates to: DFFMLPSVPVSM*QGVLPGCLLRF Trigger: AAACCTCAGCAGGCACCCTGGGAGGACACCTTGCCACATGGACACAGGGACTGAGGGAAGCATGAAGAAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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3UTR TCA 72 bp | CAGAGGGAATGTGGAGGAAAGAAAAATACATTGCCGTaGAGAACTTGGCGCCCCATGCACACCGCACGGCCT | + |
Preference number: 3 (lower is better) Translates to: QRECGGKKNTLP*RTWRPMHTARP Trigger: AGGCCGTGCGGTGTGCATGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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3UTR TCA 72 bp | GTACTCATTCTTGCCTCTAGGAAGCCCACTCTCCCTTaGCAGGCTGGGCAGGTATTCTCATCTGCTCTCCGT | + |
Preference number: 3 (lower is better) Translates to: VLILASRKPTLP*QAGQVFSSALR Trigger: ACGGAGAGCAGATGAGAATACCTGCCCAGCCTGTCAAGGGAGAGTGGGCTTCCTAGAGGCAAGAATGAGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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3UTR GCA 72 bp | AGATTCAGAGGGAATGTGGAGGAAAGAAAAATACATTaGCGTGAAGAACTTGGCGCCCCATGCACACCGCAC | + |
Preference number: 3 (lower is better) Translates to: RFRGNVEERKIH*REELGAPCTPH Trigger: GTGCGGTGTGCATGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCCTCTGAATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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3UTR TCA 72 bp | GTGCAAGAGATTAGCCATCTTTCCAGACTCCCTTTTTaGGGATCAGTAAACCTAGGACCAGTACAGGGTGGT | + |
Preference number: 3 (lower is better) Translates to: VQEISHLSRLPF*GSVNLGPVQGG Trigger: ACCACCCTGTACTGGTCCTAGGTTTACTGATCCTCAAAAAGGGAGTCTGGAAAGATGGCTAATCTCTTGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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3UTR GCA 72 bp | AGGGTAGAAGACATCTGTAGGTGCAAGGTAAGAGAGTaGAAGAGATTAGCCATCTTTCCAGACTCCCTTTTT | + |
Preference number: 3 (lower is better) Translates to: RVEDICRCKVRE*KRLAIFPDSLF Trigger: AAAAAGGGAGTCTGGAAAGATGGCTAATCTCTTGCACTCTCTTACCTTGCACCTACAGATGTCTTCTACCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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3UTR GCA 72 bp | CAACTCATATCTCAGAGGGTAGAAGACATCTGTAGGTaGAAGGTAAGAGAGTGCAAGAGATTAGCCATCTTT | + |
Preference number: 3 (lower is better) Translates to: QLISQRVEDICR*KVRECKRLAIF Trigger: AAAGATGGCTAATCTCTTGCACTCTCTTACCTTGCACCTACAGATGTCTTCTACCCTCTGAGATATGAGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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3UTR TCA 72 bp | CCACAATCCTGGGTATTTAATGGAGTTGTCATGAAATaGAAAATAACTAGCTACCGGGGCCTAATTGTATCT | + |
Preference number: 3 (lower is better) Translates to: PQSWVFNGVVMK*KITSYRGLIVS Trigger: AGATACAATTAGGCCCCGGTAGCTAGTTATTTTTCATTTCATGACAACTCCATTAAATACCCAGGATTGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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CDS-3UTR CCA 90 bp | ACAGGCTGGGCAGGTATTCTCATCTGCTCTCCGTGGCCCAGCCAGGTGTCCCGAGCACTGGAGGCTCCGTaGCGACGCGGGCCGCTGCTC | + |
Preference number: 4 (lower is better) Translates to: TGWAGILICSPWPSQVSRALEAP*RRGPLL Trigger: GAGCAGCGGCCCGCGTCGCCACGGAGCCTCCAGTGC...TCGGGACACCTGGCTGGGCCACGGAGAGCAGATGAGAATACCTGCCCAGCCTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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CDS-3UTR TCA 90 bp | ACAGGCTGGGCAGGTATTCTCATCTGCTCTCCGTGGCCCAGCCAGGTGTCCCGAGGGCGCCCGGCACGCTaGGCGCCAGCTCGTGTAACA | + |
Preference number: 4 (lower is better) Translates to: TGWAGILICSPWPSQVSRGRPAR*APARVT Trigger: TGTTACACGAGCTGGCGCTCAGCGTGCCGGGCGCCC...TCGGGACACCTGGCTGGGCCACGGAGAGCAGATGAGAATACCTGCCCAGCCTGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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CDS-3UTR TCA 90 bp | ACAGGCTGGGCAGGTATTCTCATCTGCTCTCCGTGGCCCAGCCAGGTGTCCCGAGGCCTCAGGAACTCCTaGTCCAGCGGGAGGGCTCCC | + |
Preference number: 4 (lower is better) Translates to: TGWAGILICSPWPSQVSRGLRNS*SSGRAP Trigger: GGGAGCCCTCCCGCTGGATCAGGAGTTCCTGAGGCC...TCGGGACACCTGGCTGGGCCACGGAGAGCAGATGAGAATACCTGCCCAGCCTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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CDS-3UTR CCA 90 bp | CTTCCCTCAGTCCCTGTGTCCATGTGGCAAGGTGTCCTCCCAGGGTGCCTGCTGAAGAGGTGGCTCCGCTaGCCCGGAACGCGCAGGGCA | + |
Preference number: 4 (lower is better) Translates to: LPSVPVSMWQGVLPGCLLKRWLR*PGTRRA Trigger: TGCCCTGCGCGTTCCGGGCCAGCGGAGCCACCTCTT...CAGCAGGCACCCTGGGAGGACACCTTGCCACATGGACACAGGGACTGAGGGAAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR CCA 90 bp | CTTCATGCTTCCCTCAGTCCCTGTGTCCATGTGGCAAGGTGTCCTCCCAGGGTGGCACTGGAGGCTCCGTaGCGACGCGGGCCGCTGCTC | + |
Preference number: 4 (lower is better) Translates to: LHASLSPCVHVARCPPRVALEAP*RRGPLL Trigger: GAGCAGCGGCCCGCGTCGCCACGGAGCCTCCAGTGC...CACCCTGGGAGGACACCTTGCCACATGGACACAGGGACTGAGGGAAGCATGAAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR TCA 90 bp | CTTCCCTCAGTCCCTGTGTCCATGTGGCAAGGTGTCCTCCCAGGGTGCCTGCTGCGCGGGCCGCTGCTCTaGATGTGGGACACTGCCTCT | + |
Preference number: 4 (lower is better) Translates to: LPSVPVSMWQGVLPGCLLRGPLL*MWDTAS Trigger: AGAGGCAGTGTCCCACATTCAGAGCAGCGGCCCGCG...CAGCAGGCACCCTGGGAGGACACCTTGCCACATGGACACAGGGACTGAGGGAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR GCA 90 bp | TTCATGCTTCCCTCAGTCCCTGTGTCCATGTGGCAAGGTGTCCTCCCAGGGTGCGGCGACGCGGGCCGCTaGTCTGAATGTGGGACACTG | + |
Preference number: 4 (lower is better) Translates to: FMLPSVPVSMWQGVLPGCGDAGR*SECGTL Trigger: CAGTGTCCCACATTCAGAGCAGCGGCCCGCGTCGCC...GCACCCTGGGAGGACACCTTGCCACATGGACACAGGGACTGAGGGAAGCATGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR GCA 90 bp | CTTCATGCTTCCCTCAGTCCCTGTGTCCATGTGGCAAGGTGTCCTCCCAGGGTGCCGGTACCGGAGCCGTaGCTCTGGCGCAGAAGGACA | + |
Preference number: 4 (lower is better) Translates to: LHASLSPCVHVARCPPRVPVPEP*LWRRRT Trigger: TGTCCTTCTGCGCCAGAGGCACGGCTCCGGTACCGG...CACCCTGGGAGGACACCTTGCCACATGGACACAGGGACTGAGGGAAGCATGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR GCA 90 bp | TTGACAGGCTGGGCAGGTATTCTCATCTGCTCTCCGTGGCCCAGCCAGGTGTCCCCTTATTTGTTACCTTaGTCCGGGCGCCCGGCACGC | + |
Preference number: 4 (lower is better) Translates to: LTGWAGILICSPWPSQVSPYLLP*SGRPAR Trigger: GCGTGCCGGGCGCCCGGAGCAAGGTAACAAATAAGG...GGACACCTGGCTGGGCCACGGAGAGCAGATGAGAATACCTGCCCAGCCTGTCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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CDS-3UTR CCA 90 bp | GTATTCTCATCTGCTCTCCGTGGCCCAGCCAGGTGTCCCGAGATGCCTTTCTTCCCAGCGAGTAAGAGGTaGCTCCGCTGGCCCGGAACG | + |
Preference number: 4 (lower is better) Translates to: VFSSALRGPARCPEMPFFPASKR*LRWPGT Trigger: CGTTCCGGGCCAGCGGAGCCACCTCTTACTCGCTGG...GAAGAAAGGCATCTCGGGACACCTGGCTGGGCCACGGAGAGCAGATGAGAATAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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CDS-3UTR GCA 90 bp | CTTCATGCTTCCCTCAGTCCCTGTGTCCATGTGGCAAGGTGTCCTCCCAGGGTGTGGTTTCAGAGGTGGTaGGGACAGCAGCGCCTGCGT | + |
Preference number: 4 (lower is better) Translates to: LHASLSPCVHVARCPPRVWFQRW*GQQRLR Trigger: ACGCAGGCGCTGCTGTCCGCACCACCTCTGAAACCA...CACCCTGGGAGGACACCTTGCCACATGGACACAGGGACTGAGGGAAGCATGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR CCA 90 bp | AAAGAAAAATACATTGCCGTGAAGAACTTGGCGCCCCATGCACACCGCACGGCCAAGAGGTGGCTCCGCTaGCCCGGAACGCGCAGGGCA | + |
Preference number: 4 (lower is better) Translates to: KEKYIAVKNLAPHAHRTAKRWLR*PGTRRA Trigger: TGCCCTGCGCGTTCCGGGCCAGCGGAGCCACCTCTT...GGCCGTGCGGTGTGCATGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR CCA 90 bp | TTTGCATGGACTTCTTCATGCTTCCCTCAGTCCCTGTGTCCATGTGGCAAGGTGCCGGAGCCGTGCCTCTaGCGCAGAAGGACAGCCTGC | + |
Preference number: 4 (lower is better) Translates to: FAWTSSCFPQSLCPCGKVPEPCL*RRRTAC Trigger: GCAGGCTGTCCTTCTGCGCCAGAGGCACGGCTCCGG...CACCTTGCCACATGGACACAGGGACTGAGGGAAGCATGAAGAAGTCCATGCAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR GCA 90 bp | TTCATGCTTCCCTCAGTCCCTGTGTCCATGTGGCAAGGTGTCCTCCCAGGGTGCAAGAGCAGCAGGCTGTaGAGTAGCAGAGGTAGCAGG | + |
Preference number: 4 (lower is better) Translates to: FMLPSVPVSMWQGVLPGCKSSRL*SSRGSR Trigger: CCTGCTACCTCTGCTACTGCACAGCCTGCTGCTCTT...GCACCCTGGGAGGACACCTTGCCACATGGACACAGGGACTGAGGGAAGCATGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR GCA 90 bp | GTATTCTCATCTGCTCTCCGTGGCCCAGCCAGGTGTCCCGAGATGCCTTTCTTCGGTGTGAGATGTCATTaGCCTGGACTCGCACGGTGC | + |
Preference number: 4 (lower is better) Translates to: VFSSALRGPARCPEMPFFGVRCH*PGLARC Trigger: GCACCGTGCGAGTCCAGGGCAATGACATCTCACACC...GAAGAAAGGCATCTCGGGACACCTGGCTGGGCCACGGAGAGCAGATGAGAATAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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CDS-3UTR GCA 90 bp | AAAGAAAAATACATTGCCGTGAAGAACTTGGCGCCCCATGCACACCGCACGGCCGTGGGACACTGCCTCTaGAGCTTGCATGTTGGGCGG | + |
Preference number: 4 (lower is better) Translates to: KEKYIAVKNLAPHAHRTAVGHCL*SLHVGR Trigger: CCGCCCAACATGCAAGCTGCAGAGGCAGTGTCCCAC...GGCCGTGCGGTGTGCATGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR CCA 90 bp | GGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACTTGGCGCCCCATGCCCAGCGAGTAAGAGGTaGCTCCGCTGGCCCGGAACG | + |
Preference number: 4 (lower is better) Translates to: GNVEERKIHCREELGAPCPASKR*LRWPGT Trigger: CGTTCCGGGCCAGCGGAGCCACCTCTTACTCGCTGG...GCATGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR TCA 90 bp | TCAAGGGACTTGCTCAAGAGTTCGTGCAAAATGAAGATTCAGAGGGAATGTGGAGGGCGCCCGGCACGCTaGGCGCCAGCTCGTGTAACA | + |
Preference number: 4 (lower is better) Translates to: SRDLLKSSCKMKIQRECGGRPAR*APARVT Trigger: TGTTACACGAGCTGGCGCTCAGCGTGCCGGGCGCCC...TCCACATTCCCTCTGAATCTTCATTTTGCACGAACTCTTGAGCAAGTCCCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR TCA 90 bp | AGAGGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACTTGGCGCCCCACGCGGGCCGCTGCTCTaGATGTGGGACACTGCCTCT | + |
Preference number: 4 (lower is better) Translates to: RGNVEERKIHCREELGAPRGPLL*MWDTAS Trigger: AGAGGCAGTGTCCCACATTCAGAGCAGCGGCCCGCG...TGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR GCA 90 bp | GGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACTTGGCGCCCCATGCGCGGACAGCAGCGCCTaGGTTGTTGGAGCTGACAGC | + |
Preference number: 4 (lower is better) Translates to: GNVEERKIHCREELGAPCADSSA*VVGADS Trigger: GCTGTCAGCTCCAACAACGCAGGCGCTGCTGTCCGC...GCATGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR CCA 90 bp | GGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACTTGGCGCCCCATGCGGCTGGTTTCAGAGGTaGTGCGGACAGCAGCGCCTG | + |
Preference number: 4 (lower is better) Translates to: GNVEERKIHCREELGAPCGWFQR*CGQQRL Trigger: CAGGCGCTGCTGTCCGCACCACCTCTGAAACCAGCC...GCATGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR TCA 90 bp | AGAGGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACTTGGCGCCCCACAGCCGAAGCCGGTGTaGGATGTCATTGCCCTGGAC | + |
Preference number: 4 (lower is better) Translates to: RGNVEERKIHCREELGAPQPKPV*DVIALD Trigger: GTCCAGGGCAATGACATCTCACACCGGCTTCGGCTG...TGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR GCA 90 bp | TTTGCATGGACTTCTTCATGCTTCCCTCAGTCCCTGTGTCCATGTGGCAAGGTGAAGAGCAGCAGGCTGTaGAGTAGCAGAGGTAGCAGG | + |
Preference number: 4 (lower is better) Translates to: FAWTSSCFPQSLCPCGKVKSSRL*SSRGSR Trigger: CCTGCTACCTCTGCTACTGCACAGCCTGCTGCTCTT...CACCTTGCCACATGGACACAGGGACTGAGGGAAGCATGAAGAAGTCCATGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR GCA 90 bp | AGAGGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACTTGGCGCCCCACCTTATTTGTTACCTTaGTCCGGGCGCCCGGCACGC | + |
Preference number: 4 (lower is better) Translates to: RGNVEERKIHCREELGAPPYLLP*SGRPAR Trigger: GCGTGCCGGGCGCCCGGAGCAAGGTAACAAATAAGG...TGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR GCA 90 bp | GAGGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACTTGGCGCCCCATACTGCCTCTGCAGCTTaGATGTTGGGCGGCGCGAAG | + |
Preference number: 4 (lower is better) Translates to: EGMWRKEKYIAVKNLAPHTASAA*MLGGAK Trigger: CTTCGCGCCGCCCAACATGCAAGCTGCAGAGGCAGT...ATGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR GCA 90 bp | AGAGGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACTTGGCGCCCCAGTGGGACACTGCCTCTaGAGCTTGCATGTTGGGCGG | + |
Preference number: 4 (lower is better) Translates to: RGNVEERKIHCREELGAPVGHCL*SLHVGR Trigger: CCGCCCAACATGCAAGCTGCAGAGGCAGTGTCCCAC...TGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR CCA 90 bp | GAGGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACTTGGCGCCCCATCTGCAGCTTGCATGTTaGGCGGCGCGAAGCGCGATA | + |
Preference number: 4 (lower is better) Translates to: EGMWRKEKYIAVKNLAPHLQLAC*AARSAI Trigger: TATCGCGCTTCGCGCCGCCCAACATGCAAGCTGCAG...ATGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR CCA 90 bp | TTTGCATGGACTTCTTCATGCTTCCCTCAGTCCCTGTGTCCATGTGGCAAGGTGGAGATGTCATTGCCCTaGACTCGCACGGTGCTGATT | + |
Preference number: 4 (lower is better) Translates to: FAWTSSCFPQSLCPCGKVEMSLP*TRTVLI Trigger: AATCAGCACCGTGCGAGTCCAGGGCAATGACATCTC...CACCTTGCCACATGGACACAGGGACTGAGGGAAGCATGAAGAAGTCCATGCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR TCA 90 bp | TCAAGGGACTTGCTCAAGAGTTCGTGCAAAATGAAGATTCAGAGGGAATGTGGACCCGGGGAGGCTCCTTaGGGTACCACCACTGAATCT | + |
Preference number: 4 (lower is better) Translates to: SRDLLKSSCKMKIQRECGPGEAP*GTTTES Trigger: AGATTCAGTGGTGGTACCTCAAGGAGCCTCCCCGGG...TCCACATTCCCTCTGAATCTTCATTTTGCACGAACTCTTGAGCAAGTCCCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR TCA 90 bp | TTACATACTATCCTCAAGGGACTTGCTCAAGAGTTCGTGCAAAATGAAGATTCAGGCCTCAGGAACTCCTaGTCCAGCGGGAGGGCTCCC | + |
Preference number: 4 (lower is better) Translates to: LHTILKGLAQEFVQNEDSGLRNS*SSGRAP Trigger: GGGAGCCCTCCCGCTGGATCAGGAGTTCCTGAGGCC...TGAATCTTCATTTTGCACGAACTCTTGAGCAAGTCCCTTGAGGATAGTATGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR CCA 90 bp | TCTGAGACATACAACTTATCCCCAACTCATATCTCAGAGGGTAGAAGACATCTGGGCTGGTTTCAGAGGTaGTGCGGACAGCAGCGCCTG | + |
Preference number: 4 (lower is better) Translates to: SETYNLSPTHISEGRRHLGWFQR*CGQQRL Trigger: CAGGCGCTGCTGTCCGCACCACCTCTGAAACCAGCC...CAGATGTCTTCTACCCTCTGAGATATGAGTTGGGGATAAGTTGTATGTCTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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CDS-3UTR CCA 90 bp | AATGAAGATTCAGAGGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACCCGGAGCCGTGCCTCTaGCGCAGAAGGACAGCCTGC | + |
Preference number: 4 (lower is better) Translates to: NEDSEGMWRKEKYIAVKNPEPCL*RRRTAC Trigger: GCAGGCTGTCCTTCTGCGCCAGAGGCACGGCTCCGG...GTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCCTCTGAATCTTCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR TCA 90 bp | TCTGAGACATACAACTTATCCCCAACTCATATCTCAGAGGGTAGAAGACATCTGCCCGGGGAGGCTCCTTaGGGTACCACCACTGAATCT | + |
Preference number: 4 (lower is better) Translates to: SETYNLSPTHISEGRRHLPGEAP*GTTTES Trigger: AGATTCAGTGGTGGTACCTCAAGGAGCCTCCCCGGG...CAGATGTCTTCTACCCTCTGAGATATGAGTTGGGGATAAGTTGTATGTCTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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CDS-3UTR GCA 90 bp | GGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACTTGGCGCCCCATGCCTGAATGTGGGACACTaGCTCTGCAGCTTGCATGTT | + |
Preference number: 4 (lower is better) Translates to: GNVEERKIHCREELGAPCLNVGH*LCSLHV Trigger: AACATGCAAGCTGCAGAGGCAGTGTCCCACATTCAG...GCATGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR GCA 90 bp | TTACATACTATCCTCAAGGGACTTGCTCAAGAGTTCGTGCAAAATGAAGATTCAGGCGACGCGGGCCGCTaGTCTGAATGTGGGACACTG | + |
Preference number: 4 (lower is better) Translates to: LHTILKGLAQEFVQNEDSGDAGR*SECGTL Trigger: CAGTGTCCCACATTCAGAGCAGCGGCCCGCGTCGCC...TGAATCTTCATTTTGCACGAACTCTTGAGCAAGTCCCTTGAGGATAGTATGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR GCA 90 bp | AATGAAGATTCAGAGGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACGCGGACAGCAGCGCCTaGGTTGTTGGAGCTGACAGC | + |
Preference number: 4 (lower is better) Translates to: NEDSEGMWRKEKYIAVKNADSSA*VVGADS Trigger: GCTGTCAGCTCCAACAACGCAGGCGCTGCTGTCCGC...GTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCCTCTGAATCTTCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR TCA 90 bp | TTACATACTATCCTCAAGGGACTTGCTCAAGAGTTCGTGCAAAATGAAGATTCACTGCGTTGTTGGAGCTaGCAGCACTGGAGGCTCCGT | + |
Preference number: 4 (lower is better) Translates to: LHTILKGLAQEFVQNEDSLRCWS*QHWRLR Trigger: ACGGAGCCTCCAGTGCTGTCAGCTCCAACAACGCAG...TGAATCTTCATTTTGCACGAACTCTTGAGCAAGTCCCTTGAGGATAGTATGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR TCA 90 bp | AATGAAGATTCAGAGGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACCTGCGTTGTTGGAGCTaGCAGCACTGGAGGCTCCGT | + |
Preference number: 4 (lower is better) Translates to: NEDSEGMWRKEKYIAVKNLRCWS*QHWRLR Trigger: ACGGAGCCTCCAGTGCTGTCAGCTCCAACAACGCAG...GTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCCTCTGAATCTTCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR GCA 90 bp | TTACATACTATCCTCAAGGGACTTGCTCAAGAGTTCGTGCAAAATGAAGATTCAACTGCCTCTGCAGCTTaGATGTTGGGCGGCGCGAAG | + |
Preference number: 4 (lower is better) Translates to: LHTILKGLAQEFVQNEDSTASAA*MLGGAK Trigger: CTTCGCGCCGCCCAACATGCAAGCTGCAGAGGCAGT...TGAATCTTCATTTTGCACGAACTCTTGAGCAAGTCCCTTGAGGATAGTATGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR CCA 90 bp | AATGAAGATTCAGAGGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACCTGCAGCTTGCATGTTaGGCGGCGCGAAGCGCGATA | + |
Preference number: 4 (lower is better) Translates to: NEDSEGMWRKEKYIAVKNLQLAC*AARSAI Trigger: TATCGCGCTTCGCGCCGCCCAACATGCAAGCTGCAG...GTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCCTCTGAATCTTCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR GCA 90 bp | TTACATACTATCCTCAAGGGACTTGCTCAAGAGTTCGTGCAAAATGAAGATTCAGGTGTGAGATGTCATTaGCCTGGACTCGCACGGTGC | + |
Preference number: 4 (lower is better) Translates to: LHTILKGLAQEFVQNEDSGVRCH*PGLARC Trigger: GCACCGTGCGAGTCCAGGGCAATGACATCTCACACC...TGAATCTTCATTTTGCACGAACTCTTGAGCAAGTCCCTTGAGGATAGTATGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR GCA 90 bp | TCTGAGACATACAACTTATCCCCAACTCATATCTCAGAGGGTAGAAGACATCTGCTGAATGTGGGACACTaGCTCTGCAGCTTGCATGTT | + |
Preference number: 4 (lower is better) Translates to: SETYNLSPTHISEGRRHLLNVGH*LCSLHV Trigger: AACATGCAAGCTGCAGAGGCAGTGTCCCACATTCAG...CAGATGTCTTCTACCCTCTGAGATATGAGTTGGGGATAAGTTGTATGTCTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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CDS-3UTR GCA 90 bp | TCTGAGACATACAACTTATCCCCAACTCATATCTCAGAGGGTAGAAGACATCTGGGTGCTGATTTTAGTTaGATCCTTATTTGTTACCTT | + |
Preference number: 4 (lower is better) Translates to: SETYNLSPTHISEGRRHLGADFS*ILICYL Trigger: AAGGTAACAAATAAGGATGCAACTAAAATCAGCACC...CAGATGTCTTCTACCCTCTGAGATATGAGTTGGGGATAAGTTGTATGTCTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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CDS GCA 90 bp | CCTGGGCCGGTACCGGAGCCGTGCCTCTGGCGCAGAAGGACAGCCTaGCCTGATGGTGGTGATGCTGATGAAGAAGCAGCAGCTGCAGCA | + |
Preference number: 5 (lower is better) Translates to: PGPVPEPCLWRRRTA*PDGGDADEEAAAAA Trigger: TGCTGCAGCTGCTGCTTCTTCATCAGCATCACCACCATCAGGGCAGGCTGTCCTTCTGCGCCAGAGGCACGGCTCCGGTACCGGCCCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS CCA 90 bp | GGCCGCTGCTCTGAATGTGGGACACTGCCTCTGCAGCTTGCATGTTaGGCGGCGCGAAGCGCGATAGCACACGCAGCAATGCCTGGGCCT | + |
Preference number: 5 (lower is better) Translates to: GRCSECGTLPLQLAC*AARSAIAHAAMPGP Trigger: AGGCCCAGGCATTGCTGCGTGTGCTATCGCGCTTCGCGCCGCCCAACATGCAAGCTGCAGAGGCAGTGTCCCACATTCAGAGCAGCGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044705.12 ENSMUST00000186352.2 ENSMUST00000205845.2 ENSMUST00000206223.2 |
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CDS-3UTR CAA 90 bp | CTTCCCTCAGTCCCTGTGTCCATGTGGCAAGGTGTCCTCCCAGGGTGCCTGCTGTCCTTATTTGTTACCTaGCTCCGGGCGCCCGGCACG | + |
Preference number: 5 (lower is better) Translates to: LPSVPVSMWQGVLPGCLLSLFVT*LRAPGT Trigger: CGTGCCGGGCGCCCGGAGCAAGGTAACAAATAAGGA...CAGCAGGCACCCTGGGAGGACACCTTGCCACATGGACACAGGGACTGAGGGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS TCA 90 bp | AACACCTTCGTCCTGCAATCGTACGGCGGACAGCCGAAGCCGGTGTaGGATGTCATTGCCCTGGACTCGCACGGTGCTGATTTTAGTTGC | + |
Preference number: 5 (lower is better) Translates to: NTFVLQSYGGQPKPV*DVIALDSHGADFSC Trigger: GCAACTAAAATCAGCACCGTGCGAGTCCAGGGCAATGACATCTCACACCGGCTTCGGCTGTCCGCCGTACGATTGCAGGACGAAGGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS CCA 90 bp | TGCCCTGGACTCGCACGGTCTGTCTGCTTGGGAGAGTGGGGATGCTaGACAGCCAAGGGGACCTCATCATTTCCTCTAAATTCTCCACTT | + |
Preference number: 5 (lower is better) Translates to: CPGLARSVCLGEWGC*TAKGTSSFPLNSPL Trigger: AAGTGGAGAATTTAGAGGAAATGATGAGGTCCCCTTGGCTGTCCAGCATCCCCACTCTCCCAAGCAGACAGACCGTGCGAGTCCAGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186352.2 |
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CDS-3UTR CAA 90 bp | GGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACTTGGCGCCCCATGCTCTGCAGCTTGCATGTaGGGCGGCGCGAAGCGCGAT | + |
Preference number: 5 (lower is better) Translates to: GNVEERKIHCREELGAPCSAACM*GGAKRD Trigger: ATCGCGCTTCGCGCCGCCCAACATGCAAGCTGCAGA...GCATGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR CAA 90 bp | GGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACTTGGCGCCCCATGCCGGTGTGAGATGTCATaGCCCTGGACTCGCACGGTG | + |
Preference number: 5 (lower is better) Translates to: GNVEERKIHCREELGAPCRCEMS*PWTRTV Trigger: CACCGTGCGAGTCCAGGGCAATGACATCTCACACCG...GCATGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR CAA 90 bp | AGAGGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACTTGGCGCCCCACACTGCCTCTGCAGCTaGCATGTTGGGCGGCGCGAA | + |
Preference number: 5 (lower is better) Translates to: RGNVEERKIHCREELGAPHCLCS*HVGRRE Trigger: TTCGCGCCGCCCAACATGCAAGCTGCAGAGGCAGTG...TGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR CAA 90 bp | AGAGGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACTTGGCGCCCCATCCTTATTTGTTACCTaGCTCCGGGCGCCCGGCACG | + |
Preference number: 5 (lower is better) Translates to: RGNVEERKIHCREELGAPSLFVT*LRAPGT Trigger: CGTGCCGGGCGCCCGGAGCAAGGTAACAAATAAGGA...TGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR CAA 90 bp | GAGGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACTTGGCGCCCCATCGGTGTGAGATGTCATaGCCCTGGACTCGCACGGTG | + |
Preference number: 5 (lower is better) Translates to: EGMWRKEKYIAVKNLAPHRCEMS*PWTRTV Trigger: CACCGTGCGAGTCCAGGGCAATGACATCTCACACCG...ATGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS-3UTR CAA 90 bp | TACCGGGGCCTAATTGTATCTCTGAGACATACAACTTATCCCCAACTCATATCTCACTGCCTCTGCAGCTaGCATGTTGGGCGGCGCGAA | + |
Preference number: 5 (lower is better) Translates to: YRGLIVSLRHTTYPQLISHCLCS*HVGRRE Trigger: TTCGCGCCGCCCAACATGCAAGCTGCAGAGGCAGTG...AGATATGAGTTGGGGATAAGTTGTATGTCTCAGAGATACAATTAGGCCCCGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044705.12 |
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CDS-3UTR CAA 90 bp | GAGGGAATGTGGAGGAAAGAAAAATACATTGCCGTGAAGAACTTGGCGCCCCATCCAGGAGGTGGGTTCTaGTCATCGTGGCTGGTTTCA | + |
Preference number: 5 (lower is better) Translates to: EGMWRKEKYIAVKNLAPHPGGGF*SSWLVS Trigger: TGAAACCAGCCACGATGACAAGAACCCACCTCCTGG...ATGGGGCGCCAAGTTCTTCACGGCAATGTATTTTTCTTTCCTCCACATTCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS CCA 90 bp | CTGGACAGCCAAGGGGACCTCATCATTTCCTCTAAATTCTCCACTTaGAACCGAACACTGGATGGAAGGTCCAACATCATGAAGGCCTTG | + |
Preference number: 5 (lower is better) Translates to: LDSQGDLIISSKFST*NRTLDGRSNIMKAL Trigger: CAAGGCCTTCATGATGTTGGACCTTCCATCCAGTGTTCGGTTCCAAGTGGAGAATTTAGAGGAAATGATGAGGTCCCCTTGGCTGTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186352.2 |
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CDS-3UTR CAA 90 bp | TCAAGGGACTTGCTCAAGAGTTCGTGCAAAATGAAGATTCAGAGGGAATGTGGACCAGGAGGTGGGTTCTaGTCATCGTGGCTGGTTTCA | + |
Preference number: 5 (lower is better) Translates to: SRDLLKSSCKMKIQRECGPGGGF*SSWLVS Trigger: TGAAACCAGCCACGATGACAAGAACCCACCTCCTGG...TCCACATTCCCTCTGAATCTTCATTTTGCACGAACTCTTGAGCAAGTCCCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS TCA 72 bp | AAACACCTTCGTCCTTGCTCCGGGCGCCCGGCACGCTaGGCGCCAGCTCGTGTAACAGCTCCCGGGGAGGCT | + |
Preference number: 6 (lower is better) Translates to: KHLRPCSGRPAR*APARVTAPGEA Trigger: AGCCTCCCCGGGAGCTGTTACACGAGCTGGCGCTCAGCGTGCCGGGCGCCCGGAGCAAGGACGAAGGTGTTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206223.2 |
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CDS GCA 72 bp | GTGGCGACGCGGGCCGCTGCTCTGAATGTGGGACACTaGCTCTGCAGCTTGCATGTTGGGCGGCGCGAAGCG | + |
Preference number: 6 (lower is better) Translates to: VATRAAALNVGH*LCSLHVGRREA Trigger: CGCTTCGCGCCGCCCAACATGCAAGCTGCAGAGGCAGTGTCCCACATTCAGAGCAGCGGCCCGCGTCGCCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044705.12 ENSMUST00000186352.2 ENSMUST00000205845.2 ENSMUST00000206223.2 |
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CDS TCA 72 bp | CCTTATTTGTTACCTTGCTCCGGGCGCCCGGCACGCTaGGCGCCAGCTCGTGTAACAGCTCCCGGGGAGGCT | + |
Preference number: 6 (lower is better) Translates to: PYLLPCSGRPAR*APARVTAPGEA Trigger: AGCCTCCCCGGGAGCTGTTACACGAGCTGGCGCTCAGCGTGCCGGGCGCCCGGAGCAAGGTAACAAATAAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS CCA 72 bp | GCGGGAGGGCTCCCAGGAGGTGGGTTCTTGTCATCGTaGCTGGTTTCAGAGGTGGTGCGGACAGCAGCGCCT | + |
Preference number: 6 (lower is better) Translates to: AGGLPGGGFLSS*LVSEVVRTAAP Trigger: AGGCGCTGCTGTCCGCACCACCTCTGAAACCAGCCACGATGACAAGAACCCACCTCCTGGGAGCCCTCCCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044705.12 ENSMUST00000186352.2 ENSMUST00000205845.2 ENSMUST00000206223.2 |
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CDS CCA 72 bp | CAAGAGCAGAGACAGCAGAGGATCGGCACTGTAGCCTaGGCCGGTACCGGAGCCGTGCCTCTGGCGCAGAAG | + |
Preference number: 6 (lower is better) Translates to: QEQRQQRIGTVA*AGTGAVPLAQK Trigger: CTTCTGCGCCAGAGGCACGGCTCCGGTACCGGCCCAGGCTACAGTGCCGATCCTCTGCTGTCTCTGCTCTTG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS CCA 72 bp | GAGGGCTCCCAGGAGGTGGGTTCTTGTCATCGTGGCTaGTTTCAGAGGTGGTGCGGACAGCAGCGCCTGCGT | + |
Preference number: 6 (lower is better) Translates to: EGSQEVGSCHRG*FQRWCGQQRLR Trigger: ACGCAGGCGCTGCTGTCCGCACCACCTCTGAAACCAGCCACGATGACAAGAACCCACCTCCTGGGAGCCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044705.12 ENSMUST00000186352.2 ENSMUST00000205845.2 ENSMUST00000206223.2 |
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CDS CAA 72 bp | CTGGTTTCAGAGGTGGTGCGGACAGCAGCGCCTGCGTaGTTGGAGCTGACAGCACTGGAGGCTCCGTGGCGA | + |
Preference number: 6 (lower is better) Translates to: LVSEVVRTAAPA*LELTALEAPWR Trigger: TCGCCACGGAGCCTCCAGTGCTGTCAGCTCCAACAACGCAGGCGCTGCTGTCCGCACCACCTCTGAAACCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044705.12 ENSMUST00000186352.2 ENSMUST00000205845.2 ENSMUST00000206223.2 |
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CDS CAA 72 bp | GATGGAAGGTCCAACATCATGAAGGCCTTGACAGTCTaGCTCCGGGCGCCCGGCACGCTGAGCGCCAGCTCG | + |
Preference number: 6 (lower is better) Translates to: DGRSNIMKALTV*LRAPGTLSASS Trigger: CGAGCTGGCGCTCAGCGTGCCGGGCGCCCGGAGCAAGACTGTCAAGGCCTTCATGATGTTGGACCTTCCATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186352.2 |
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CDS CAA 90 bp | TCAGGAACTCCTGATCCAGCGGGAGGGCTCCCAGGAGGTGGGTTCTaGTCATCGTGGCTGGTTTCAGAGGTGGTGCGGACAGCAGCGCCT | + |
Preference number: 6 (lower is better) Translates to: SGTPDPAGGLPGGGF*SSWLVSEVVRTAAP Trigger: AGGCGCTGCTGTCCGCACCACCTCTGAAACCAGCCACGATGACAAGAACCCACCTCCTGGGAGCCCTCCCGCTGGATCAGGAGTTCCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044705.12 ENSMUST00000186352.2 ENSMUST00000205845.2 ENSMUST00000206223.2 |
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CDS CAA 72 bp | CCTGATCCAGCGGGAGGGCTCCCAGGAGGTGGGTTCTaGTCATCGTGGCTGGTTTCAGAGGTGGTGCGGACA | + |
Preference number: 6 (lower is better) Translates to: PDPAGGLPGGGF*SSWLVSEVVRT Trigger: TGTCCGCACCACCTCTGAAACCAGCCACGATGACAAGAACCCACCTCCTGGGAGCCCTCCCGCTGGATCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044705.12 ENSMUST00000186352.2 ENSMUST00000205845.2 ENSMUST00000206223.2 |
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CDS CAA 72 bp | CGTACGGCGGACAGCCGAAGCCGGTGTGAGATGTCATaGCCCTGGACTCGCACGGTCTGTCTGCTTGGGAGA | + |
Preference number: 6 (lower is better) Translates to: RTADSRSRCEMS*PWTRTVCLLGR Trigger: TCTCCCAAGCAGACAGACCGTGCGAGTCCAGGGCAATGACATCTCACACCGGCTTCGGCTGTCCGCCGTACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186352.2 |
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CDS CAA 90 bp | CGAACACTGGATGGAAGGTCCAACATCATGAAGGCCTTGACAGTCTaGCTCCGGGCGCCCGGCACGCTGAGCGCCAGCTCGTGTAACAGC | + |
Preference number: 6 (lower is better) Translates to: RTLDGRSNIMKALTV*LRAPGTLSASSCNS Trigger: GCTGTTACACGAGCTGGCGCTCAGCGTGCCGGGCGCCCGGAGCAAGACTGTCAAGGCCTTCATGATGTTGGACCTTCCATCCAGTGTTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186352.2 |
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CDS CAA 90 bp | ACTTGGAACCGAACACTGGATGGAAGGTCCAACATCATGAAGGCCTaGACAGTCTTGCTCCGGGCGCCCGGCACGCTGAGCGCCAGCTCG | + |
Preference number: 6 (lower is better) Translates to: TWNRTLDGRSNIMKA*TVLLRAPGTLSASS Trigger: CGAGCTGGCGCTCAGCGTGCCGGGCGCCCGGAGCAAGACTGTCAAGGCCTTCATGATGTTGGACCTTCCATCCAGTGTTCGGTTCCAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186352.2 |
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CDS CAA 90 bp | TCCTGCAATCGTACGGCGGACAGCCGAAGCCGGTGTGAGATGTCATaGCCCTGGACTCGCACGGTCTGTCTGCTTGGGAGAGTGGGGATG | + |
Preference number: 6 (lower is better) Translates to: SCNRTADSRSRCEMS*PWTRTVCLLGRVGM Trigger: CATCCCCACTCTCCCAAGCAGACAGACCGTGCGAGTCCAGGGCAATGACATCTCACACCGGCTTCGGCTGTCCGCCGTACGATTGCAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186352.2 |
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CDS TCA 72 bp | GTCCTGCAATCGTACGGCGGACAGCCGAAGCCGGTGTaGGATGTCATTGCCCTGGACTCGCACGGTGCTGAT | + |
Preference number: 6 (lower is better) Translates to: VLQSYGGQPKPV*DVIALDSHGAD Trigger: ATCAGCACCGTGCGAGTCCAGGGCAATGACATCTCACACCGGCTTCGGCTGTCCGCCGTACGATTGCAGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS GCA 72 bp | GTACCGGAGCCGTGCCTCTGGCGCAGAAGGACAGCCTaGCCTGATGGTGGTGATGCTGATGAAGAAGCAGCA | + |
Preference number: 6 (lower is better) Translates to: VPEPCLWRRRTA*PDGGDADEEAA Trigger: TGCTGCTTCTTCATCAGCATCACCACCATCAGGGCAGGCTGTCCTTCTGCGCCAGAGGCACGGCTCCGGTAC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS CCA 72 bp | TCTGAATGTGGGACACTGCCTCTGCAGCTTGCATGTTaGGCGGCGCGAAGCGCGATAGCACACGCAGCAATG | + |
Preference number: 6 (lower is better) Translates to: SECGTLPLQLAC*AARSAIAHAAM Trigger: CATTGCTGCGTGTGCTATCGCGCTTCGCGCCGCCCAACATGCAAGCTGCAGAGGCAGTGTCCCACATTCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044705.12 ENSMUST00000186352.2 ENSMUST00000205845.2 ENSMUST00000206223.2 |
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CDS CAA 90 bp | GCGCAGGGCATTTCGATATCGTCACCCTCTCGCACGGTTACATCTTaGGGGACTTCGGTGAATGTAGCGTCGGCCACGAAGAGCAGCAGG | + |
Preference number: 6 (lower is better) Translates to: AQGISISSPSRTVTS*GTSVNVASATKSSR Trigger: CCTGCTGCTCTTCGTGGCCGACGCTACATTCACCGAAGTCCCCAAAGATGTAACCGTGCGAGAGGGTGACGATATCGAAATGCCCTGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 ENSMUST00000206223.2 |
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CDS CAA 72 bp | CGTACGGCGGACAGCCGAAGCCGGTGTGAGATGTCATaGCCCTGGACTCGCACGGTGCTGATTTTAGTTGCA | + |
Preference number: 6 (lower is better) Translates to: RTADSRSRCEMS*PWTRTVLILVA Trigger: TGCAACTAAAATCAGCACCGTGCGAGTCCAGGGCAATGACATCTCACACCGGCTTCGGCTGTCCGCCGTACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS GCA 72 bp | GTCATTGCCCTGGACTCGCACGGTGCTGATTTTAGTTaGATCCTTATTTGTTACCTTGCTCCGGGCGCCCGG | + |
Preference number: 6 (lower is better) Translates to: VIALDSHGADFS*ILICYLAPGAR Trigger: CCGGGCGCCCGGAGCAAGGTAACAAATAAGGATGCAACTAAAATCAGCACCGTGCGAGTCCAGGGCAATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044705.12 ENSMUST00000205845.2 |
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CDS CCA 72 bp | CTCGCACGGTCTGTCTGCTTGGGAGAGTGGGGATGCTaGACAGCCAAGGGGACCTCATCATTTCCTCTAAAT | + |
Preference number: 6 (lower is better) Translates to: LARSVCLGEWGC*TAKGTSSFPLN Trigger: ATTTAGAGGAAATGATGAGGTCCCCTTGGCTGTCCAGCATCCCCACTCTCCCAAGCAGACAGACCGTGCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186352.2 |
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CDS CCA 72 bp | CAAGGGGACCTCATCATTTCCTCTAAATTCTCCACTTaGAACCGAACACTGGATGGAAGGTCCAACATCATG | + |
Preference number: 6 (lower is better) Translates to: QGDLIISSKFST*NRTLDGRSNIM Trigger: CATGATGTTGGACCTTCCATCCAGTGTTCGGTTCCAAGTGGAGAATTTAGAGGAAATGATGAGGTCCCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186352.2 |