Pregenerated sensors for VSTM2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048834Ensembl transcript IDs: ENSMUST00000109645.9, ENSMUST00000109647.3, ENSMUST00000207256.2, ENSMUST00000208926.2
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCACCCTTCACAAAGCCACAAACAAGAAGCAGGACAGAAAGTCCATaGCTTGTAGCTATCCTCGCACCTGCGGAAGAAGTTATAAGATAT | + |
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Preference number: 1 (lower is better) Translates to: APFTKPQTRSRTESP*LVAILAPAEEVIRY Trigger: ATATCTTATAACTTCTTCCGCAGGTGCGAGGATAGCTACAAGCCATGGACTTTCTGTCCTGCTTCTTGTTTGTGGCTTTGTGAAGGGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207256.2 |
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| 3UTR GCA 90 bp | TGGTCCTCAGTAATCCTAGTCAAGCAACAGAGAGCTACAAATCCATaGTTGCTGGGGTGTGACTCTCTTCTTCCATTTTATACATTCCAG | + |
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Preference number: 1 (lower is better) Translates to: WSSVILVKQQRATNP*LLGCDSLLPFYTFQ Trigger: CTGGAATGTATAAAATGGAAGAAGAGAGTCACACCCCAGCAAGCATGGATTTGTAGCTCTCTGTTGCTTGACTAGGATTACTGAGGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
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| 3UTR GCA 90 bp | AAGAAGCAGGACAGAAAGTCCATGGCTTGTAGCTATCCTCGCACCTaGGGAAGAAGTTATAAGATATTCGCTCATCTTGAAGATTTCCAA | + |
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Preference number: 1 (lower is better) Translates to: KKQDRKSMACSYPRT*GRSYKIFAHLEDFQ Trigger: TTGGAAATCTTCAAGATGAGCGAATATCTTATAACTTCTTCCGCAGGTGCGAGGATAGCTACAAGCCATGGACTTTCTGTCCTGCTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207256.2 |
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| 3UTR GCA 90 bp | TGCTGTATGAGACAGTTTGTGGTTCTTAGGTTTTCCATCTTTGTTTaGTTCTTGAAGATTAGGTGTCCCTCGTTAGGAAATTGGTGGAAT | + |
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Preference number: 1 (lower is better) Translates to: CCMRQFVVLRFSIFV*FLKIRCPSLGNWWN Trigger: ATTCCACCAATTTCCTAACGAGGGACACCTAATCTTCAAGAAGCAAACAAAGATGGAAAACCTAAGAACCACAAACTGTCTCATACAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 ENSMUST00000208926.2 |
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| 3UTR TCA 90 bp | GAGTATAAAAGGTTCCAAATTAGCAGCCACCATGTTCTTTCAACTTaGAAGTTCAGTTCAGTACAATTTGGTGAACAATGTCCTTTACAA | + |
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Preference number: 1 (lower is better) Translates to: EYKRFQISSHHVLST*KFSSVQFGEQCPLQ Trigger: TTGTAAAGGACATTGTTCACCAAATTGTACTGAACTGAACTTTCAAGTTGAAAGAACATGGTGGCTGCTAATTTGGAACCTTTTATACTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
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| 3UTR-3UTR TCA 90 bp | TGGCTGTCCTGGTTAGACCTGTATACCAGGTTGTCCTCAAACTCAGAGATTCTCAGGATGGACTCTTCCTaGGTTCTGGCACCATTAGTC | + |
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Preference number: 2 (lower is better) Translates to: WLSWLDLYTRLSSNSEILRMDSS*VLAPLV Trigger: GACTAATGGTGCCAGAACTCAGGAAGAGTCCATCCT...GAGAATCTCTGAGTTTGAGGACAACCTGGTATACAGGTCTAACCAGGACAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGTCCTGGTTAGACCTGTATACCAGGTTGTCCTCAAACTCAGAGATTCTCAGAGCTACAAATCCATaGTTGCTGGGGTGTGACTCT | + |
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Preference number: 2 (lower is better) Translates to: WLSWLDLYTRLSSNSEILRATNP*LLGCDS Trigger: AGAGTCACACCCCAGCAAGCATGGATTTGTAGCTCT...GAGAATCTCTGAGTTTGAGGACAACCTGGTATACAGGTCTAACCAGGACAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
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| 3UTR-3UTR CCA 90 bp | GCTATTTGTTTTGTTCCTCAGCTGGGGTGCTGTATGAGACAGTTTGTGGTTCTTTACAGGGGTGCAGAATaGTGCTTGGAGTATAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: AICFVPQLGCCMRQFVVLYRGAE*CLEYRV Trigger: GACCCTATACTCCAAGCACCATTCTGCACCCCTGTA...AAGAACCACAAACTGTCTCATACAGCACCCCAGCTGAGGAACAAAACAAATAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
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| 3UTR-3UTR GCA 90 bp | GCGGTATTCTTTTTACAAAGTGGAGGGTGGGGTGGACTTTGGTCACACAGTGATAGCTATCCTCGCACCTaGGGAAGAAGTTATAAGATA | + |
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Preference number: 2 (lower is better) Translates to: AVFFLQSGGWGGLWSHSDSYPRT*GRSYKI Trigger: TATCTTATAACTTCTTCCGCAGGTGCGAGGATAGCT...ATCACTGTGTGACCAAAGTCCACCCCACCCTCCACTTTGTAAAAAGAATACCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207256.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGTAGAGGACAACAGAGACAAACTGTAGCGGTCAAACTAGTGGAACAGAGATCTTTGTTTGCTTCTTaGAGATTAGGTGTCCCTCGT | + |
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Preference number: 2 (lower is better) Translates to: GSRGQQRQTVAVKLVEQRSLFAS*RLGVPR Trigger: ACGAGGGACACCTAATCTTCAAGAAGCAAACAAAGA...TCTCTGTTCCACTAGTTTGACCGCTACAGTTTGTCTCTGTTGTCCTCTACTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGAAATATTTAGTATACTGATGTCATTCAGGCCAACTCCTGAGCAGTCAGTGAGGGGTGCAGAATGGTaGTTGGAGTATAGGGTCAAC | + |
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Preference number: 2 (lower is better) Translates to: MEIFSILMSFRPTPEQSVRGAEW*LEYRVN Trigger: GTTGACCCTATACTCCAAGCACCATTCTGCACCCCT...CACTGACTGCTCAGGAGTTGGCCTGAATGACATCAGTATACTAAATATTTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGAGAAAGCCAGATACTTCTCCTTTGCATTTCTATCCACTTCCATTGTCATGAGGGGTGCAGAATGGTaGTTGGAGTATAGGGTCAAC | + |
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Preference number: 2 (lower is better) Translates to: VEKARYFSFAFLSTSIVMRGAEW*LEYRVN Trigger: GTTGACCCTATACTCCAAGCACCATTCTGCACCCCT...CATGACAATGGAAGTGGATAGAAATGCAAAGGAGAAGTATCTGGCTTTCTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207256.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAAACAGGTGGTTTGCGGTATTCTTTTTACAAAGTGGAGGGTGGGGTGGACTTGTCTGATGTTGATTTaGCATGGTCAGCATTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: SKQVVCGILFTKWRVGWTCLMLI*HGQHLA Trigger: AGCTAAATGCTGACCATGGCAAATCAACATCAGACA...AGTCCACCCCACCCTCCACTTTGTAAAAAGAATACCGCAAACCACCTGTTTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207256.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAAAGTCAGCTTGCATGAGCATCATAGCCTATCTACCTTGAAGTCATATCACTACAGGGGTGCAGAATaGTGCTTGGAGTATAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: KKVSLHEHHSLSTLKSYHYRGAE*CLEYRV Trigger: GACCCTATACTCCAAGCACCATTCTGCACCCCTGTA...GTGATATGACTTCAAGGTAGATAGGCTATGATGCTCATGCAAGCTGACTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGAAATATTTAGTATACTGATGTCATTCAGGCCAACTCCTGAGCAGTCAGTGAGGACAGAAAGTCCATaGCTTGTAGCTATCCTCGCA | + |
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Preference number: 2 (lower is better) Translates to: MEIFSILMSFRPTPEQSVRTESP*LVAILA Trigger: TGCGAGGATAGCTACAAGCCATGGACTTTCTGTCCT...CACTGACTGCTCAGGAGTTGGCCTGAATGACATCAGTATACTAAATATTTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207256.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTTTGTTTGCTTCTTGAAGATTAGGTGTCCCTCGTTAGGAAATTGGTGGAATACTAGAGTACAGGGGTaGAGAATGGTGCTTGGAGTA | + |
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Preference number: 2 (lower is better) Translates to: IFVCFLKIRCPSLGNWWNTRVQG*RMVLGV Trigger: TACTCCAAGCACCATTCTGCACCCCTGTACTCTAGT...ATTCCACCAATTTCCTAACGAGGGACACCTAATCTTCAAGAAGCAAACAAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAAAGTCAGCTTGCATGAGCATCATAGCCTATCTACCTTGAAGTCATATCACGTGCAGAATGGTGCTTaGAGTATAGGGTCAACTTTG | + |
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Preference number: 2 (lower is better) Translates to: KKVSLHEHHSLSTLKSYHVQNGA*SIGSTL Trigger: CAAAGTTGACCCTATACTCCAAGCACCATTCTGCAC...GTGATATGACTTCAAGGTAGATAGGCTATGATGCTCATGCAAGCTGACTTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGTGTGAAGTGCTCTTCCAGGATCTTGGGAAGTCAAAATGTCTTCTTAGTTAGGATTGGCCATAATTaGCACTTGCTACCATTGAAC | + |
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Preference number: 2 (lower is better) Translates to: QSVKCSSRILGSQNVFLVRIGHN*HLLPLN Trigger: GTTCAATGGTAGCAAGTGCCAATTATGGCCAATCCT...AACTAAGAAGACATTTTGACTTCCCAAGATCCTGGAAGAGCACTTCACACTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
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| 3UTR CAA 90 bp | ATGAGACAGTTTGTGGTTCTTAGGTTTTCCATCTTTGTTTGCTTCTaGAAGATTAGGTGTCCCTCGTTAGGAAATTGGTGGAATCCATGG | + |
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Preference number: 2 (lower is better) Translates to: MRQFVVLRFSIFVCF*KIRCPSLGNWWNPW Trigger: CCATGGATTCCACCAATTTCCTAACGAGGGACACCTAATCTTCAAGAAGCAAACAAAGATGGAAAACCTAAGAACCACAAACTGTCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 ENSMUST00000208926.2 |
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| 3UTR CAA 90 bp | ATAAAGTTGTCTGATGTTGATTTGCCATGGTCAGCATTTAGCTATTaGTTTTGTTCCTCAGCTGGGGTGCTGTATGAGACAGTTTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: IKLSDVDLPWSAFSY*FCSSAGVLYETVCG Trigger: ACCACAAACTGTCTCATACAGCACCCCAGCTGAGGAACAAAACAAATAGCTAAATGCTGACCATGGCAAATCAACATCAGACAACTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
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| 3UTR-3UTR CCA 90 bp | TCCATATGTAAAATAAAGTTGTCTGATGTTGATTTGCCATGGTCAGCATTTAGCGTGCAGAATGGTGCTTaGAGTATAGGGTCAACTTTG | + |
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Preference number: 2 (lower is better) Translates to: SICKIKLSDVDLPWSAFSVQNGA*SIGSTL Trigger: CAAAGTTGACCCTATACTCCAAGCACCATTCTGCAC...GCTAAATGCTGACCATGGCAAATCAACATCAGACAACTTTATTTTACATATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTATATGAATATAAACCTTCCAGGATTGACAAGGATTGGCCATAATTGGCACGATATTCGCTCATCTTaGAGATTTCCAATGCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: MYMNINLPGLTRIGHNWHDIRSS*RFPMLL Trigger: AAGGAGCATTGGAAATCTTCAAGATGAGCGAATATC...GTGCCAATTATGGCCAATCCTTGTCAATCCTGGAAGGTTTATATTCATATACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207256.2 |
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| 3UTR-3UTR GCA 90 bp | GATCTTGGGAAGTCAAAATGTCTTCTTAGTTTTCCCACTTGGTGTCTTTCTTTCAGAATTTGCCAGGTTTaGCTATACAGAAATTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: DLGKSKCLLSFPTWCLSFRICQV*LYRNCQ Trigger: TTGGCAATTTCTGTATAGGCAAACCTGGCAAATTCT...GAAAGAAAGACACCAAGTGGGAAAACTAAGAAGACATTTTGACTTCCCAAGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
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| 3UTR-3UTR GCA 90 bp | TTGAGAAAGCCAGATACTTCTCCTTTGCATTTCTATCCACTTCCATTGTCATGGCCAAGCATATTGATCTaGTGTATTTTCTGCTCTAAT | + |
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Preference number: 2 (lower is better) Translates to: LRKPDTSPLHFYPLPLSWPSILI*CIFCSN Trigger: ATTAGAGCAGAAAATACAGCAGATCAATATGCTTGG...CCATGACAATGGAAGTGGATAGAAATGCAAAGGAGAAGTATCTGGCTTTCTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207256.2 |
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| 3UTR CAA 90 bp | AGAATGAAGAAAGTCAGCTTGCATGAGCATCATAGCCTATCTACCTaGAAGTCATATCACACATACTATAAGCAATTTACAGAATTTGCC | + |
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Preference number: 2 (lower is better) Translates to: RMKKVSLHEHHSLST*KSYHTYYKQFTEFA Trigger: GGCAAATTCTGTAAATTGCTTATAGTATGTGTGATATGACTTCAAGGTAGATAGGCTATGATGCTCATGCAAGCTGACTTTCTTCATTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
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| 3UTR CAA 90 bp | TGGGGTGGACTTTGGTCACACAGTGATAAACAGGTCTTTATTATTTaGGACACTGATACAATGAATCTAATGAGCATTCTTCCAAAACTA | + |
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Preference number: 2 (lower is better) Translates to: WGGLWSHSDKQVFII*DTDTMNLMSILPKL Trigger: TAGTTTTGGAAGAATGCTCATTAGATTCATTGTATCAGTGTCCAAAATAATAAAGACCTGTTTATCACTGTGTGACCAAAGTCCACCCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207256.2 |
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| 3UTR-3UTR GCA 90 bp | GATCTTGGGAAGTCAAAATGTCTTCTTAGTTTTCCCACTTGGTGTCTTTCTTTCGAGCAGTCAGTGAAATaGAGGTTTTATTTGTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: DLGKSKCLLSFPTWCLSFEQSVK*RFYLLK Trigger: TTTCAACAAATAAAACCTGCATTTCACTGACTGCTC...GAAAGAAAGACACCAAGTGGGAAAACTAAGAAGACATTTTGACTTCCCAAGATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCATGAGCATCATAGCCTATCTACCTTGAAGTCATATCACACATACTATAAGGATGTTGATTTGCCATaGTCAGCATTTAGCTATTTG | + |
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Preference number: 2 (lower is better) Translates to: LHEHHSLSTLKSYHTYYKDVDLP*SAFSYL Trigger: CAAATAGCTAAATGCTGACCATGGCAAATCAACATC...CTTATAGTATGTGTGATATGACTTCAAGGTAGATAGGCTATGATGCTCATGCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTATATGAATATAAACCTTCCAGGATTGACAAGGATTGGCCATAATTGGCACCTTGAAGATTTCCAATaGTCCTTATTAGGCTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: MYMNINLPGLTRIGHNWHLEDFQ*SLLGCF Trigger: AAAACAGCCTAATAAGGAGCATTGGAAATCTTCAAG...GTGCCAATTATGGCCAATCCTTGTCAATCCTGGAAGGTTTATATTCATATACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207256.2 |
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| 3UTR CCA 72 bp | AGGTGGTTTGCGGTATTCTTTTTACAAAGTGGAGGGTaGGGTGGACTTTGGTCACACAGTGATAAACAGGTC | + |
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Preference number: 3 (lower is better) Translates to: RWFAVFFLQSGG*GGLWSHSDKQV Trigger: GACCTGTTTATCACTGTGTGACCAAAGTCCACCCCACCCTCCACTTTGTAAAAAGAATACCGCAAACCACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207256.2 |
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| 3UTR CCA 72 bp | CCATTTTATACATTCCAGGGTCCCCTGCCCAGGGAATaGTTCTGTGTATACTTAGGAGAGGTCTCCTATATT | + |
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Preference number: 3 (lower is better) Translates to: PFYTFQGPLPRE*FCVYLGEVSYI Trigger: AATATAGGAGACCTCTCCTAAGTATACACAGAACCATTCCCTGGGCAGGGGACCCTGGAATGTATAAAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
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| 3UTR-3UTR CAA 90 bp | ATGTCATTCAGGCCAACTCCTGAGCAGTCAGTGAAATGCAGGTTTTATTTGTTGGGTGCAGAATGGTGCTaGGAGTATAGGGTCAACTTT | + |
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Preference number: 3 (lower is better) Translates to: MSFRPTPEQSVKCRFYLLGAEWC*EYRVNF Trigger: AAAGTTGACCCTATACTCCAAGCACCATTCTGCACC...CAACAAATAAAACCTGCATTTCACTGACTGCTCAGGAGTTGGCCTGAATGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
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| 3UTR GCA 72 bp | GACAGAAAGTCCATGGCTTGTAGCTATCCTCGCACCTaGGGAAGAAGTTATAAGATATTCGCTCATCTTGAA | + |
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Preference number: 3 (lower is better) Translates to: DRKSMACSYPRT*GRSYKIFAHLE Trigger: TTCAAGATGAGCGAATATCTTATAACTTCTTCCGCAGGTGCGAGGATAGCTACAAGCCATGGACTTTCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207256.2 |
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| 3UTR CCA 72 bp | AAGTTCCATACTCTTTTGGAGTTTGGAGCAAACAGGTaGTTTGCGGTATTCTTTTTACAAAGTGGAGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: KFHTLLEFGANR*FAVFFLQSGGW Trigger: CCACCCTCCACTTTGTAAAAAGAATACCGCAAACCACCTGTTTGCTCCAAACTCCAAAAGAGTATGGAACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207256.2 |
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| 3UTR-3UTR CAA 90 bp | GGAAGTAGAGGACAACAGAGACAAACTGTAGCGGTCAAACTAGTGGAACAGAGAGATTTTACAGGCGATTaGCTCTTTGCTTTAAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: GSRGQQRQTVAVKLVEQRDFTGD*LFALRR Trigger: TCTTCTTAAAGCAAAGAGCAAATCGCCTGTAAAATC...TCTCTGTTCCACTAGTTTGACCGCTACAGTTTGTCTCTGTTGTCCTCTACTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
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| 3UTR CCA 72 bp | ATAAACCTTCCAGGATTGACAAGGATTGGCCATAATTaGCACTTGCTACCATTGAACGAAAACGGCAATCAA | + |
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Preference number: 3 (lower is better) Translates to: INLPGLTRIGHN*HLLPLNENGNQ Trigger: TTGATTGCCGTTTTCGTTCAATGGTAGCAAGTGCCAATTATGGCCAATCCTTGTCAATCCTGGAAGGTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
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| 3UTR-3UTR CAA 90 bp | AGCATATACCCTTTTATTACAAGCATGGTGAACATTACTGATACGGGTACACATGGTGCAGAATGGTGCTaGGAGTATAGGGTCAACTTT | + |
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Preference number: 3 (lower is better) Translates to: SIYPFITSMVNITDTGTHGAEWC*EYRVNF Trigger: AAAGTTGACCCTATACTCCAAGCACCATTCTGCACC...ATGTGTACCCGTATCAGTAATGTTCACCATGCTTGTAATAAAAGGGTATATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
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| 3UTR-3UTR CAA 90 bp | AAGAAAGTCAGCTTGCATGAGCATCATAGCCTATCTACCTTGAAGTCATATCACATCTTTGTTTGCTTCTaGAAGATTAGGTGTCCCTCG | + |
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Preference number: 3 (lower is better) Translates to: KKVSLHEHHSLSTLKSYHIFVCF*KIRCPS Trigger: CGAGGGACACCTAATCTTCAAGAAGCAAACAAAGAT...GTGATATGACTTCAAGGTAGATAGGCTATGATGCTCATGCAAGCTGACTTTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
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| 3UTR-3UTR CAA 90 bp | TTGAGAAAGCCAGATACTTCTCCTTTGCATTTCTATCCACTTCCATTGTCATGGTCAGCATTTAGCTATTaGTTTTGTTCCTCAGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: LRKPDTSPLHFYPLPLSWSAFSY*FCSSAG Trigger: CCCAGCTGAGGAACAAAACAAATAGCTAAATGCTGA...CCATGACAATGGAAGTGGATAGAAATGCAAAGGAGAAGTATCTGGCTTTCTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207256.2 |
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| 3UTR-3UTR CAA 90 bp | AAAACCAGGTGTGCATTCTTCAGACTCAACTCAAGATCCCCAAACCTTAATAAATGCTCTTCCAGGATCTaGGGAAGTCAAAATGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: KTRCAFFRLNSRSPNLNKCSSRI*GSQNVF Trigger: GAAGACATTTTGACTTCCCAAGATCCTGGAAGAGCA...TTTATTAAGGTTTGGGGATCTTGAGTTGAGTCTGAAGAATGCACACCTGGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
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| 3UTR-3UTR CAA 90 bp | GTTGAGAAAGCCAGATACTTCTCCTTTGCATTTCTATCCACTTCCATTGTCATGATACTCTTTTGGAGTTaGGAGCAAACAGGTGGTTTG | + |
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Preference number: 3 (lower is better) Translates to: VEKARYFSFAFLSTSIVMILFWS*EQTGGL Trigger: CAAACCACCTGTTTGCTCCAAACTCCAAAAGAGTAT...CATGACAATGGAAGTGGATAGAAATGCAAAGGAGAAGTATCTGGCTTTCTCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207256.2 |
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| 3UTR-3UTR CAA 90 bp | TTGAGAAAGCCAGATACTTCTCCTTTGCATTTCTATCCACTTCCATTGTCATGGAAGTTCCATACTCTTTaGGAGTTTGGAGCAAACAGG | + |
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Preference number: 3 (lower is better) Translates to: LRKPDTSPLHFYPLPLSWKFHTL*EFGANR Trigger: CCTGTTTGCTCCAAACTCCAAAAGAGTATGGAACTT...CCATGACAATGGAAGTGGATAGAAATGCAAAGGAGAAGTATCTGGCTTTCTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207256.2 |
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| 3UTR-3UTR CAA 90 bp | TTGAGAAAGCCAGATACTTCTCCTTTGCATTTCTATCCACTTCCATTGTCATGGAGATATTCGCTCATCTaGAAGATTTCCAATGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: LRKPDTSPLHFYPLPLSWRYSLI*KISNAP Trigger: AGGAGCATTGGAAATCTTCAAGATGAGCGAATATCT...CCATGACAATGGAAGTGGATAGAAATGCAAAGGAGAAGTATCTGGCTTTCTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207256.2 |
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| 3UTR-3UTR CAA 90 bp | GATCTTGGGAAGTCAAAATGTCTTCTTAGTTTTCCCACTTGGTGTCTTTCTTTCATAAACCTTCCAGGATaGACAAGGATTGGCCATAAT | + |
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Preference number: 3 (lower is better) Translates to: DLGKSKCLLSFPTWCLSFINLPG*TRIGHN Trigger: ATTATGGCCAATCCTTGTCAATCCTGGAAGGTTTAT...GAAAGAAAGACACCAAGTGGGAAAACTAAGAAGACATTTTGACTTCCCAAGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
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| 3UTR GCA 72 bp | AGACAGTTTGTGGTTCTTAGGTTTTCCATCTTTGTTTaGTTCTTGAAGATTAGGTGTCCCTCGTTAGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: RQFVVLRFSIFV*FLKIRCPSLGN Trigger: ATTTCCTAACGAGGGACACCTAATCTTCAAGAAGCAAACAAAGATGGAAAACCTAAGAACCACAAACTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 ENSMUST00000208926.2 |
||
| 3UTR TCA 72 bp | AAGTCAGCTTGCATGAGCATCATAGCCTATCTACCTTaGAGTCATATCACACATACTATAAGCAATTTACAG | + |
|
Preference number: 3 (lower is better) Translates to: KSACMSIIAYLP*SHITHTISNLQ Trigger: CTGTAAATTGCTTATAGTATGTGTGATATGACTTCAAGGTAGATAGGCTATGATGCTCATGCAAGCTGACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGATTAGGTGTCCCTCGTTAGGAAATTGGTGGAATCCATGGAAATATTTAGTAGATTTTACAGGCGATTaGCTCTTTGCTTTAAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: KIRCPSLGNWWNPWKYLVDFTGD*LFALRR Trigger: TCTTCTTAAAGCAAAGAGCAAATCGCCTGTAAAATC...TACTAAATATTTCCATGGATTCCACCAATTTCCTAACGAGGGACACCTAATCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
||
| CDS-3UTR GCA 90 bp | CCATGCTTGCTGGGGTGTGACTCTCTTCTTCCATTTTATACATTCCAGGGTCCCGCAGCCTCCGTGCCTTaGTCCAGGTCCTCTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PCLLGCDSLLPFYTFQGPAASVP*SRSSGP Trigger: GGGGCCAGAGGACCTGGAGCAAGGCACGGAGGCTGC...GGGACCCTGGAATGTATAAAATGGAAGAAGAGAGTCACACCCCAGCAAGCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR GCA 90 bp | ATGTCATTCAGGCCAACTCCTGAGCAGTCAGTGAAATGCAGGTTTTATTTGTTGGCAGCCTCCGTGCCTTaGTCCAGGTCCTCTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: MSFRPTPEQSVKCRFYLLAASVP*SRSSGP Trigger: GGGGCCAGAGGACCTGGAGCAAGGCACGGAGGCTGC...CAACAAATAAAACCTGCATTTCACTGACTGCTCAGGAGTTGGCCTGAATGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAAGGAAGTAGAGGACAACAGAGACAAACTGTAGCGGTCAAACTAGTGGAAGGTAAGAGCTCCACCTaGGAGCCTGCAGCCTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PEGSRGQQRQTVAVKLVEGKSST*EPAASV Trigger: CACGGAGGCTGCAGGCTCGCAGGTGGAGCTCTTACC...TTCCACTAGTTTGACCGCTACAGTTTGTCTCTGTTGTCCTCTACTTCCTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109645.9 |
||
| CDS-3UTR GCA 90 bp | ATTCTCCTCCTTTGCCTCCCTAGTTCTATGATTAAAGGCATGCACCACCAATGCGGTAAGAGCTCCACCTaGGAGCCTGCAGCCTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: ILLLCLPSSMIKGMHHQCGKSST*EPAASV Trigger: CACGGAGGCTGCAGGCTCGCAGGTGGAGCTCTTACC...GCATTGGTGGTGCATGCCTTTAATCATAGAACTAGGGAGGCAAAGGAGGAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR TCA 90 bp | GGGTGTGACTCTCTTCTTCCATTTTATACATTCCAGGGTCCCCTGCCCAGGGAATTGCAGCCACATAGGTaGGGCTTCAAAGGCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GCDSLLPFYTFQGPLPRELQPHR*GFKGLH Trigger: ATGCAGGCCTTTGAAGCCTCACCTATGTGGCTGCAA...TTCCCTGGGCAGGGGACCCTGGAATGTATAAAATGGAAGAAGAGAGTCACACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR GCA 90 bp | TGGCTGTCCTGGTTAGACCTGTATACCAGGTTGTCCTCAAACTCAGAGATTCTCGGGCTGGAGGTGGAGTaGATTCGTTGGTTGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WLSWLDLYTRLSSNSEILGLEVE*IRWLAE Trigger: CTCTGCCAACCAACGAATGCACTCCACCTCCAGCCC...GAGAATCTCTGAGTTTGAGGACAACCTGGTATACAGGTCTAACCAGGACAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR CCA 90 bp | CCATGCTTGCTGGGGTGTGACTCTCTTCTTCCATTTTATACATTCCAGGGTCCCCTACCGCTTGAGGGCTaGAGGTGGAGTGCATTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PCLLGCDSLLPFYTFQGPLPLEG*RWSAFV Trigger: AACGAATGCACTCCACCTCCAGCCCTCAAGCGGTAG...GGGACCCTGGAATGTATAAAATGGAAGAAGAGAGTCACACCCCAGCAAGCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR TCA 90 bp | GGATTGACAAGGATTGGCCATAATTGGCACTTGCTACCATTGAACGAAAACGGCATTTTGGCTACCGCTTaGGGGCTGGAGGTGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLTRIGHNWHLLPLNENGILATA*GLEVEC Trigger: GCACTCCACCTCCAGCCCTCAAGCGGTAGCCAAAAT...GCCGTTTTCGTTCAATGGTAGCAAGTGCCAATTATGGCCAATCCTTGTCAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109645.9 |
||
| CDS-3UTR GCA 90 bp | AAAACCAGGTGTGCATTCTTCAGACTCAACTCAAGATCCCCAAACCTTAATAAAGCAGCCTCCGTGCCTTaGTCCAGGTCCTCTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KTRCAFFRLNSRSPNLNKAASVP*SRSSGP Trigger: GGGGCCAGAGGACCTGGAGCAAGGCACGGAGGCTGC...TTTATTAAGGTTTGGGGATCTTGAGTTGAGTCTGAAGAATGCACACCTGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109645.9 |
||
| CDS-3UTR TCA 90 bp | GCAGAATGGTGCTTGGAGTATAGGGTCAACTTTGCTGTCCGCTCCGTAGATTTTAGCTATCCTCGCACCTaGTTGTGGACTTTGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AEWCLEYRVNFAVRSVDFSYPRT*LWTLLG Trigger: CCCAAGCAAAGTCCACAATCAGGTGCGAGGATAGCT...AAAATCTACGGAGCGGACAGCAAAGTTGACCCTATACTCCAAGCACCATTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109645.9 |
||
| CDS-3UTR CCA 90 bp | TTATACATTCCAGGGTCCCCTGCCCAGGGAATGGTTCTGTGTATACTTAGGAGAGAAGCAGAGCCGCTTTaGAAAGCACAGGACATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYIPGSPAQGMVLCILRREAEPL*KAQDIS Trigger: GGAGATGTCCTGTGCTTTCCAAAGCGGCTCTGCTTC...TCTCCTAAGTATACACAGAACCATTCCCTGGGCAGGGGACCCTGGAATGTATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR CCA 90 bp | CCATGCTTGCTGGGGTGTGACTCTCTTCTTCCATTTTATACATTCCAGGGTCCCCGAAGGAACCACCACTaGATCTCCAGGTACACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PCLLGCDSLLPFYTFQGPRRNHH*ISRYTE Trigger: TTCAGTGTACCTGGAGATCCAGTGGTGGTTCCTTCG...GGGACCCTGGAATGTATAAAATGGAAGAAGAGAGTCACACCCCAGCAAGCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTGTCCTGGTTAGACCTGTATACCAGGTTGTCCTCAAACTCAGAGATTCTCTTTGCTTGGGGATTTTaGCTACCGCTTGAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WLSWLDLYTRLSSNSEILFAWGF*LPLEGW Trigger: CCAGCCCTCAAGCGGTAGCCAAAATCCCCAAGCAAA...GAGAATCTCTGAGTTTGAGGACAACCTGGTATACAGGTCTAACCAGGACAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR TCA 90 bp | GGATTGACAAGGATTGGCCATAATTGGCACTTGCTACCATTGAACGAAAACGGCTTGCAGCCACATAGGTaGGGCTTCAAAGGCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLTRIGHNWHLLPLNENGLQPHR*GFKGLH Trigger: ATGCAGGCCTTTGAAGCCTCACCTATGTGGCTGCAA...GCCGTTTTCGTTCAATGGTAGCAAGTGCCAATTATGGCCAATCCTTGTCAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109645.9 |
||
| CDS-3UTR TCA 90 bp | CAGCATTTAGCTATTTGTTTTGTTCCTCAGCTGGGGTGCTGTATGAGACAGTTTATTTTGGCTACCGCTTaGGGGCTGGAGGTGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QHLAICFVPQLGCCMRQFILATA*GLEVEC Trigger: GCACTCCACCTCCAGCCCTCAAGCGGTAGCCAAAAT...AAACTGTCTCATACAGCACCCCAGCTGAGGAACAAAACAAATAGCTAAATGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
||
| CDS-3UTR TCA 90 bp | ATTCCAGGGTCCCCTGCCCAGGGAATGGTTCTGTGTATACTTAGGAGAGGTCTCGTTTATTATGCAAGCTaGTTGTGGACTTTGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPGSPAQGMVLCILRRGLVYYAS*LWTLLG Trigger: CCCAAGCAAAGTCCACAATCAGCTTGCATAATAAAC...GAGACCTCTCCTAAGTATACACAGAACCATTCCCTGGGCAGGGGACCCTGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR GCA 90 bp | CCATGCTTGCTGGGGTGTGACTCTCTTCTTCCATTTTATACATTCCAGGGTCCCGACATCTCCACATTTTaGCCTTCGGTAGCAGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: PCLLGCDSLLPFYTFQGPDISTF*PSVAVT Trigger: TGTGACTGCTACCGAAGGGCAAAATGTGGAGATGTC...GGGACCCTGGAATGTATAAAATGGAAGAAGAGAGTCACACCCCAGCAAGCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR GCA 90 bp | AGGTTTTCCATCTTTGTTTGCTTCTTGAAGATTAGGTGTCCCTCGTTAGGAAATGGTAAGAGCTCCACCTaGGAGCCTGCAGCCTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RFSIFVCFLKIRCPSLGNGKSST*EPAASV Trigger: CACGGAGGCTGCAGGCTCGCAGGTGGAGCTCTTACC...ATTTCCTAACGAGGGACACCTAATCTTCAAGAAGCAAACAAAGATGGAAAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
||
| CDS-3UTR CCA 90 bp | TTATACATTCCAGGGTCCCCTGCCCAGGGAATGGTTCTGTGTATACTTAGGAGATGCATCCTCCGAGCATaGCTGTTGGCATTGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LYIPGSPAQGMVLCILRRCILRA*LLALTF Trigger: GAAAGTCAATGCCAACAGCCATGCTCGGAGGATGCA...TCTCCTAAGTATACACAGAACCATTCCCTGGGCAGGGGACCCTGGAATGTATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR CCA 90 bp | CCAGAAGGAAGTAGAGGACAACAGAGACAAACTGTAGCGGTCAAACTAGTGGAATTTGCTTGGGGATTTTaGCTACCGCTTGAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PEGSRGQQRQTVAVKLVEFAWGF*LPLEGW Trigger: CCAGCCCTCAAGCGGTAGCCAAAATCCCCAAGCAAA...TTCCACTAGTTTGACCGCTACAGTTTGTCTCTGTTGTCCTCTACTTCCTTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109645.9 |
||
| CDS-3UTR GCA 90 bp | ATGTCATTCAGGCCAACTCCTGAGCAGTCAGTGAAATGCAGGTTTTATTTGTTGCAGAGTTGTGGACGCTaGTGGGAACCACCGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: MSFRPTPEQSVKCRFYLLQSCGR*WEPPMM Trigger: CATCATCGGTGGTTCCCAGCAGCGTCCACAACTCTG...CAACAAATAAAACCTGCATTTCACTGACTGCTCAGGAGTTGGCCTGAATGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
||
| CDS-3UTR GCA 90 bp | ATGGAAATATTTAGTATACTGATGTCATTCAGGCCAACTCCTGAGCAGTCAGTGGGGCTGGAGGTGGAGTaGATTCGTTGGTTGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: MEIFSILMSFRPTPEQSVGLEVE*IRWLAE Trigger: CTCTGCCAACCAACGAATGCACTCCACCTCCAGCCC...CACTGACTGCTCAGGAGTTGGCCTGAATGACATCAGTATACTAAATATTTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGTAGAGGACAACAGAGACAAACTGTAGCGGTCAAACTAGTGGAACAGAGATGCATCCTCCGAGCATaGCTGTTGGCATTGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSRGQQRQTVAVKLVEQRCILRA*LLALTF Trigger: GAAAGTCAATGCCAACAGCCATGCTCGGAGGATGCA...TCTCTGTTCCACTAGTTTGACCGCTACAGTTTGTCTCTGTTGTCCTCTACTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109645.9 |
||
| CDS-3UTR CCA 90 bp | CATTTAGCTATTTGTTTTGTTCCTCAGCTGGGGTGCTGTATGAGACAGTTTGTGCTACCGCTTGAGGGCTaGAGGTGGAGTGCATTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: HLAICFVPQLGCCMRQFVLPLEG*RWSAFV Trigger: AACGAATGCACTCCACCTCCAGCCCTCAAGCGGTAG...CACAAACTGTCTCATACAGCACCCCAGCTGAGGAACAAAACAAATAGCTAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
||
| CDS-3UTR TCA 90 bp | CAGCATTTAGCTATTTGTTTTGTTCCTCAGCTGGGGTGCTGTATGAGACAGTTTTTGCAGCCACATAGGTaGGGCTTCAAAGGCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QHLAICFVPQLGCCMRQFLQPHR*GFKGLH Trigger: ATGCAGGCCTTTGAAGCCTCACCTATGTGGCTGCAA...AAACTGTCTCATACAGCACCCCAGCTGAGGAACAAAACAAATAGCTAAATGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
||
| CDS-3UTR CCA 90 bp | TTTGCTGTCCGCTCCGTAGATTTTACAGGCGATTTGCTCTTTGCTTTAAGAAGAGAAGCAGAGCCGCTTTaGAAAGCACAGGACATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FAVRSVDFTGDLLFALRREAEPL*KAQDIS Trigger: GGAGATGTCCTGTGCTTTCCAAAGCGGCTCTGCTTC...TCTTCTTAAAGCAAAGAGCAAATCGCCTGTAAAATCTACGGAGCGGACAGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109645.9 |
||
| CDS-3UTR CCA 90 bp | CATTTAGCTATTTGTTTTGTTCCTCAGCTGGGGTGCTGTATGAGACAGTTTGTGGAAGCAGAGCCGCTTTaGAAAGCACAGGACATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLAICFVPQLGCCMRQFVEAEPL*KAQDIS Trigger: GGAGATGTCCTGTGCTTTCCAAAGCGGCTCTGCTTC...CACAAACTGTCTCATACAGCACCCCAGCTGAGGAACAAAACAAATAGCTAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGTATAAAAGGTTCCAAATTAGCAGCCACCATGTTCTTTCAACTTGAAAGTATTTTGGCTACCGCTTaGGGGCTGGAGGTGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSIKGSKLAATMFFQLESILATA*GLEVEC Trigger: GCACTCCACCTCCAGCCCTCAAGCGGTAGCCAAAAT...ACTTTCAAGTTGAAAGAACATGGTGGCTGCTAATTTGGAACCTTTTATACTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR TCA 90 bp | TTGAGAAAGCCAGATACTTCTCCTTTGCATTTCTATCCACTTCCATTGTCATGGTGGCTCTGGTGCTCATaGATGTCTTGGCATGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LRKPDTSPLHFYPLPLSWWLWCS*MSWHAL Trigger: CAGTGCATGCCAAGACATTCATGAGCACCAGAGCCA...CCATGACAATGGAAGTGGATAGAAATGCAAAGGAGAAGTATCTGGCTTTCTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207256.2 |
||
| CDS-3UTR GCA 90 bp | TTATACATTCCAGGGTCCCCTGCCCAGGGAATGGTTCTGTGTATACTTAGGAGATGTGGGAGATATCATTaGCTTGGACTTTCACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LYIPGSPAQGMVLCILRRCGRYH*LGLSLY Trigger: GTACAGTGAAAGTCCAAGGCAATGATATCTCCCACA...TCTCCTAAGTATACACAGAACCATTCCCTGGGCAGGGGACCCTGGAATGTATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR GCA 90 bp | TGCTGTATGAGACAGTTTGTGGTTCTTAGGTTTTCCATCTTTGTTTGCTTCTTGCAGAGTTGTGGACGCTaGTGGGAACCACCGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: CCMRQFVVLRFSIFVCFLQSCGR*WEPPMM Trigger: CATCATCGGTGGTTCCCAGCAGCGTCCACAACTCTG...CAAGAAGCAAACAAAGATGGAAAACCTAAGAACCACAAACTGTCTCATACAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
||
| CDS-3UTR GCA 90 bp | AGCATATACCCTTTTATTACAAGCATGGTGAACATTACTGATACGGGTACACATGGGCTGGAGGTGGAGTaGATTCGTTGGTTGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SIYPFITSMVNITDTGTHGLEVE*IRWLAE Trigger: CTCTGCCAACCAACGAATGCACTCCACCTCCAGCCC...ATGTGTACCCGTATCAGTAATGTTCACCATGCTTGTAATAAAAGGGTATATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109645.9 |
||
| CDS-3UTR GCA 90 bp | TTGCGGTATTCTTTTTACAAAGTGGAGGGTGGGGTGGACTTTGGTCACACAGTGATGAATGTCTTGGCATaGACTGATTGTGGACTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRYSFYKVEGGVDFGHTVMNVLA*TDCGLC Trigger: GCAAAGTCCACAATCAGTGCATGCCAAGACATTCAT...CACTGTGTGACCAAAGTCCACCCCACCCTCCACTTTGTAAAAAGAATACCGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207256.2 |
||
| CDS-3UTR GCA 90 bp | ATACTGATGTCATTCAGGCCAACTCCTGAGCAGTCAGTGAAATGCAGGTTTTATAGGGGTGCAGAATGGTaGTTGGAGTATAGGGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ILMSFRPTPEQSVKCRFYRGAEW*LEYRVN Trigger: GTTGACCCTATACTCCAAGCACCATTCTGCACCCCT...ATAAAACCTGCATTTCACTGACTGCTCAGGAGTTGGCCTGAATGACATCAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208926.2 |
||
| CDS-3UTR CCA 90 bp | AGGTTTTCCATCTTTGTTTGCTTCTTGAAGATTAGGTGTCCCTCGTTAGGAAATCTACCGCTTGAGGGCTaGAGGTGGAGTGCATTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: RFSIFVCFLKIRCPSLGNLPLEG*RWSAFV Trigger: AACGAATGCACTCCACCTCCAGCCCTCAAGCGGTAG...ATTTCCTAACGAGGGACACCTAATCTTCAAGAAGCAAACAAAGATGGAAAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
||
| CDS-3UTR CCA 90 bp | TCCATGGAAATATTTAGTATACTGATGTCATTCAGGCCAACTCCTGAGCAGTCATTTGCTTGGGGATTTTaGCTACCGCTTGAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SMEIFSILMSFRPTPEQSFAWGF*LPLEGW Trigger: CCAGCCCTCAAGCGGTAGCCAAAATCCCCAAGCAAA...TGACTGCTCAGGAGTTGGCCTGAATGACATCAGTATACTAAATATTTCCATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
||
| CDS-3UTR CCA 90 bp | CAGCATTTAGCTATTTGTTTTGTTCCTCAGCTGGGGTGCTGTATGAGACAGTTTTACAGGGGTGCAGAATaGTGCTTGGAGTATAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QHLAICFVPQLGCCMRQFYRGAE*CLEYRV Trigger: GACCCTATACTCCAAGCACCATTCTGCACCCCTGTA...AAACTGTCTCATACAGCACCCCAGCTGAGGAACAAAACAAATAGCTAAATGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000208926.2 |
||
| CDS-3UTR TCA 90 bp | ATTCTCCTCCTTTGCCTCCCTAGTTCTATGATTAAAGGCATGCACCACCAATGCCTCACTTTGGATATCTaGAGCTTGTGGGAGATATCA | + |
|
Preference number: 4 (lower is better) Translates to: ILLLCLPSSMIKGMHHQCLTLDI*SLWEIS Trigger: TGATATCTCCCACAAGCTTCAGATATCCAAAGTGAG...GCATTGGTGGTGCATGCCTTTAATCATAGAACTAGGGAGGCAAAGGAGGAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR TCA 90 bp | ATCTTTGTTTGCTTCTTGAAGATTAGGTGTCCCTCGTTAGGAAATTGGTGGAATCATGGCTGTTGGCATTaGCTTTCAGATAGGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IFVCFLKIRCPSLGNWWNHGCWH*LSDRPG Trigger: CCCAGGCCTATCTGAAAGTCAATGCCAACAGCCATG...ATTCCACCAATTTCCTAACGAGGGACACCTAATCTTCAAGAAGCAAACAAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
||
| CDS-3UTR TCA 90 bp | AGGCAAACCCAGAAACATATCTCACATGCTATTCTAGACATAATAGAGGTGACTCATGGCTGTTGGCATTaGCTTTCAGATAGGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RQTQKHISHAILDIIEVTHGCWH*LSDRPG Trigger: CCCAGGCCTATCTGAAAGTCAATGCCAACAGCCATG...AGTCACCTCTATTATGTCTAGAATAGCATGTGAGATATGTTTCTGGGTTTGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR GCA 90 bp | TGGCTGTCCTGGTTAGACCTGTATACCAGGTTGTCCTCAAACTCAGAGATTCTCCAACTCGGTAAATTTTaGTTGAGAAGAAAGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WLSWLDLYTRLSSNSEILQLGKF*LRRKPL Trigger: CAAGGGCTTTCTTCTCAAGCAAAATTTACCGAGTTG...GAGAATCTCTGAGTTTGAGGACAACCTGGTATACAGGTCTAACCAGGACAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR GCA 90 bp | ATACTGATGTCATTCAGGCCAACTCCTGAGCAGTCAGTGAAATGCAGGTTTTATGCTGATTGTGGACTTTaGTTGGGGATTTTGGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: ILMSFRPTPEQSVKCRFYADCGL*LGILAT Trigger: GGTAGCCAAAATCCCCAAGCAAAGTCCACAATCAGC...ATAAAACCTGCATTTCACTGACTGCTCAGGAGTTGGCCTGAATGACATCAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208926.2 |
||
| CDS-3UTR TCA 90 bp | AAGATTAGGTGTCCCTCGTTAGGAAATTGGTGGAATCCATGGAAATATTTAGTACATGGCTGTTGGCATTaGCTTTCAGATAGGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KIRCPSLGNWWNPWKYLVHGCWH*LSDRPG Trigger: CCCAGGCCTATCTGAAAGTCAATGCCAACAGCCATG...TACTAAATATTTCCATGGATTCCACCAATTTCCTAACGAGGGACACCTAATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
||
| CDS-3UTR GCA 90 bp | ATGGAAATATTTAGTATACTGATGTCATTCAGGCCAACTCCTGAGCAGTCAGTGGACATCTCCACATTTTaGCCTTCGGTAGCAGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: MEIFSILMSFRPTPEQSVDISTF*PSVAVT Trigger: TGTGACTGCTACCGAAGGGCAAAATGTGGAGATGTC...CACTGACTGCTCAGGAGTTGGCCTGAATGACATCAGTATACTAAATATTTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
||
| CDS-3UTR GCA 90 bp | CAGAAACATATCTCACATGCTATTCTAGACATAATAGAGGTGACTGATAGTTCACAGAGTTGTGGACGCTaGTGGGAACCACCGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: QKHISHAILDIIEVTDSSQSCGR*WEPPMM Trigger: CATCATCGGTGGTTCCCAGCAGCGTCCACAACTCTG...TGAACTATCAGTCACCTCTATTATGTCTAGAATAGCATGTGAGATATGTTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR GCA 90 bp | ATGGAAATATTTAGTATACTGATGTCATTCAGGCCAACTCCTGAGCAGTCAGTGCCTGATTGTGGACTTTaGTTGGGGATTTTGGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: MEIFSILMSFRPTPEQSVPDCGL*LGILAT Trigger: GGTAGCCAAAATCCCCAAGCAAAGTCCACAATCAGG...CACTGACTGCTCAGGAGTTGGCCTGAATGACATCAGTATACTAAATATTTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109645.9 |
||
| CDS-3UTR CCA 90 bp | GATCTTGGGAAGTCAAAATGTCTTCTTAGTTTTCCCACTTGGTGTCTTTCTTTCCGAAGGAACCACCACTaGATCTCCAGGTACACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: DLGKSKCLLSFPTWCLSFRRNHH*ISRYTE Trigger: TTCAGTGTACCTGGAGATCCAGTGGTGGTTCCTTCG...GAAAGAAAGACACCAAGTGGGAAAACTAAGAAGACATTTTGACTTCCCAAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109645.9 |
||
| CDS-3UTR CCA 90 bp | ATGTCATTCAGGCCAACTCCTGAGCAGTCAGTGAAATGCAGGTTTTATTTGTTGGTGCAGAATGGTGCTTaGAGTATAGGGTCAACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: MSFRPTPEQSVKCRFYLLVQNGA*SIGSTL Trigger: CAAAGTTGACCCTATACTCCAAGCACCATTCTGCAC...CAACAAATAAAACCTGCATTTCACTGACTGCTCAGGAGTTGGCCTGAATGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208926.2 |
||
| 3UTR CAA 72 bp | CTTCCAGGATTGACAAGGATTGGCCATAATTGGCACTaGCTACCATTGAACGAAAACGGCAATCAAGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPGLTRIGHNWH*LPLNENGNQGK Trigger: TTTTCCTTGATTGCCGTTTTCGTTCAATGGTAGCAAGTGCCAATTATGGCCAATCCTTGTCAATCCTGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
||
| 3UTR CAA 72 bp | ATCCTAGTCAAGCAACAGAGAGCTACAAATCCATGCTaGCTGGGGTGTGACTCTCTTCTTCCATTTTATACA | + |
|
Preference number: 4 (lower is better) Translates to: ILVKQQRATNPC*LGCDSLLPFYT Trigger: TGTATAAAATGGAAGAAGAGAGTCACACCCCAGCAAGCATGGATTTGTAGCTCTCTGTTGCTTGACTAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR TCA 90 bp | CAGAGAGCTACAAATCCATGCTTGCTGGGGTGTGACTCTCTTCTTCCATTTTATTCGGTAAATTTTGCTTaGGAAGAAAGCCCTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QRATNPCLLGCDSLLPFYSVNFA*EESPCC Trigger: ACAACAAGGGCTTTCTTCTCAAGCAAAATTTACCGA...ATAAAATGGAAGAAGAGAGTCACACCCCAGCAAGCATGGATTTGTAGCTCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR GCA 90 bp | CAGAGTGTGAAGTGCTCTTCCAGGATCTTGGGAAGTCAAAATGTCTTCTTAGTTTGTGGGAGATATCATTaGCTTGGACTTTCACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QSVKCSSRILGSQNVFLVCGRYH*LGLSLY Trigger: GTACAGTGAAAGTCCAAGGCAATGATATCTCCCACA...AACTAAGAAGACATTTTGACTTCCCAAGATCCTGGAAGAGCACTTCACACTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109645.9 |
||
| CDS-3UTR CCA 90 bp | TGCTGTATGAGACAGTTTGTGGTTCTTAGGTTTTCCATCTTTGTTTGCTTCTTGAGGACAGAAAGTCCATaGCTTGTAGCTATCCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: CCMRQFVVLRFSIFVCFLRTESP*LVAILA Trigger: TGCGAGGATAGCTACAAGCCATGGACTTTCTGTCCT...CAAGAAGCAAACAAAGATGGAAAACCTAAGAACCACAAACTGTCTCATACAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109645.9 |
||
| CDS-3UTR TCA 90 bp | TTTGCTGTCCGCTCCGTAGATTTTACAGGCGATTTGCTCTTTGCTTTAAGAAGATCGGTAAATTTTGCTTaGGAAGAAAGCCCTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FAVRSVDFTGDLLFALRRSVNFA*EESPCC Trigger: ACAACAAGGGCTTTCTTCTCAAGCAAAATTTACCGA...TCTTCTTAAAGCAAAGAGCAAATCGCCTGTAAAATCTACGGAGCGGACAGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109645.9 |
||
| CDS-3UTR TCA 90 bp | CAGAAACATATCTCACATGCTATTCTAGACATAATAGAGGTGACTGATAGTTCATTTCCTCCCAGTAGGTaGGAGTGGGCTTCTATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QKHISHAILDIIEVTDSSFPPSR*EWASIA Trigger: AGCAATAGAAGCCCACTCTCACCTACTGGGAGGAAA...TGAACTATCAGTCACCTCTATTATGTCTAGAATAGCATGTGAGATATGTTTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR GCA 90 bp | ATACTGATGTCATTCAGGCCAACTCCTGAGCAGTCAGTGAAATGCAGGTTTTATCAACTCGGTAAATTTTaGTTGAGAAGAAAGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILMSFRPTPEQSVKCRFYQLGKF*LRRKPL Trigger: CAAGGGCTTTCTTCTCAAGCAAAATTTACCGAGTTG...ATAAAACCTGCATTTCACTGACTGCTCAGGAGTTGGCCTGAATGACATCAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
||
| CDS-3UTR GCA 90 bp | CATTTAGCTATTTGTTTTGTTCCTCAGCTGGGGTGCTGTATGAGACAGTTTGTGATTTTACAGGCGATTTaGTCTTTGCTGATTGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HLAICFVPQLGCCMRQFVILQAI*SLLIVD Trigger: GTCCACAATCAGCAAAGAGCAAATCGCCTGTAAAAT...CACAAACTGTCTCATACAGCACCCCAGCTGAGGAACAAAACAAATAGCTAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208926.2 |
||
| CDS-3UTR CCA 90 bp | ATCAGCAACTTCCCAAAGAAAATATTATCAATAAAGCGTGTGACAGTGTCTTCATGCATCCTCCGAGCATaGCTGTTGGCATTGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISNFPKKILSIKRVTVSSCILRA*LLALTF Trigger: GAAAGTCAATGCCAACAGCCATGCTCGGAGGATGCA...TGAAGACACTGTCACACGCTTTATTGATAATATTTTCTTTGGGAAGTTGCTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
||
| CDS-3UTR TCA 90 bp | GATCTTGGGAAGTCAAAATGTCTTCTTAGTTTTCCCACTTGGTGTCTTTCTTTCCTCACTTTGGATATCTaGAGCTTGTGGGAGATATCA | + |
|
Preference number: 4 (lower is better) Translates to: DLGKSKCLLSFPTWCLSFLTLDI*SLWEIS Trigger: TGATATCTCCCACAAGCTTCAGATATCCAAAGTGAG...GAAAGAAAGACACCAAGTGGGAAAACTAAGAAGACATTTTGACTTCCCAAGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109645.9 |
||
| CDS-3UTR GCA 90 bp | CAGAAACATATCTCACATGCTATTCTAGACATAATAGAGGTGACTGATAGTTCAGCTGATTGTGGACTTTaGTTGGGGATTTTGGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: QKHISHAILDIIEVTDSSADCGL*LGILAT Trigger: GGTAGCCAAAATCCCCAAGCAAAGTCCACAATCAGC...TGAACTATCAGTCACCTCTATTATGTCTAGAATAGCATGTGAGATATGTTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR CCA 90 bp | CATTTAGCTATTTGTTTTGTTCCTCAGCTGGGGTGCTGTATGAGACAGTTTGTGGAGATATCATTGCCTTaGACTTTCACTGTACTAATC | + |
|
Preference number: 4 (lower is better) Translates to: HLAICFVPQLGCCMRQFVEISLP*TFTVLI Trigger: GATTAGTACAGTGAAAGTCCAAGGCAATGATATCTC...CACAAACTGTCTCATACAGCACCCCAGCTGAGGAACAAAACAAATAGCTAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
||
| 3UTR CAA 72 bp | TTTGTGGTTCTTAGGTTTTCCATCTTTGTTTGCTTCTaGAAGATTAGGTGTCCCTCGTTAGGAAATTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FVVLRFSIFVCF*KIRCPSLGNWW Trigger: CCACCAATTTCCTAACGAGGGACACCTAATCTTCAAGAAGCAAACAAAGATGGAAAACCTAAGAACCACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 ENSMUST00000208926.2 |
||
| 3UTR CAA 72 bp | CCACACTCAATGTATATGAATATAAACCTTCCAGGATaGACAAGGATTGGCCATAATTGGCACTTGCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: PHSMYMNINLPG*TRIGHNWHLLP Trigger: TGGTAGCAAGTGCCAATTATGGCCAATCCTTGTCAATCCTGGAAGGTTTATATTCATATACATTGAGTGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGTATGAGACAGTTTGTGGTTCTTAGGTTTTCCATCTTTGTTTGCTTCTTGTCGGTAAATTTTGCTTaGGAAGAAAGCCCTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CCMRQFVVLRFSIFVCFLSVNFA*EESPCC Trigger: ACAACAAGGGCTTTCTTCTCAAGCAAAATTTACCGA...CAAGAAGCAAACAAAGATGGAAAACCTAAGAACCACAAACTGTCTCATACAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
||
| CDS-3UTR CCA 90 bp | ATGGAAATATTTAGTATACTGATGTCATTCAGGCCAACTCCTGAGCAGTCAGTGGAGATATCATTGCCTTaGACTTTCACTGTACTAATC | + |
|
Preference number: 4 (lower is better) Translates to: MEIFSILMSFRPTPEQSVEISLP*TFTVLI Trigger: GATTAGTACAGTGAAAGTCCAAGGCAATGATATCTC...CACTGACTGCTCAGGAGTTGGCCTGAATGACATCAGTATACTAAATATTTCCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
||
| CDS-3UTR TCA 90 bp | CAGAAACATATCTCACATGCTATTCTAGACATAATAGAGGTGACTGATAGTTCAGAAATCCAATTCATCTaGAGAAGACAGGTTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QKHISHAILDIIEVTDSSEIQFI*RRQVWP Trigger: AGGCCAAACCTGTCTTCTTCAGATGAATTGGATTTC...TGAACTATCAGTCACCTCTATTATGTCTAGAATAGCATGTGAGATATGTTTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR GCA 90 bp | ATGTATATGAATATAAACCTTCCAGGATTGACAAGGATTGGCCATAATTGGCACCAACTCGGTAAATTTTaGTTGAGAAGAAAGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MYMNINLPGLTRIGHNWHQLGKF*LRRKPL Trigger: CAAGGGCTTTCTTCTCAAGCAAAATTTACCGAGTTG...GTGCCAATTATGGCCAATCCTTGTCAATCCTGGAAGGTTTATATTCATATACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109645.9 |
||
| CDS-3UTR GCA 90 bp | ATCAGCAACTTCCCAAAGAAAATATTATCAATAAAGCGTGTGACAGTGTCTTCATGTGGGAGATATCATTaGCTTGGACTTTCACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ISNFPKKILSIKRVTVSSCGRYH*LGLSLY Trigger: GTACAGTGAAAGTCCAAGGCAATGATATCTCCCACA...TGAAGACACTGTCACACGCTTTATTGATAATATTTTCTTTGGGAAGTTGCTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
||
| 3UTR CAA 72 bp | TTGAAAACAAGGTTGAGAAAGCCAGATACTTCTCCTTaGCATTTCTATCCACTTCCATTGTCATGGTTACAT | + |
|
Preference number: 4 (lower is better) Translates to: LKTRLRKPDTSP*HFYPLPLSWLH Trigger: ATGTAACCATGACAATGGAAGTGGATAGAAATGCAAAGGAGAAGTATCTGGCTTTCTCAACCTTGTTTTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207256.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGTATAAAAGGTTCCAAATTAGCAGCCACCATGTTCTTTCAACTTGAAAGTGAGATATCATTGCCTTaGACTTTCACTGTACTAATC | + |
|
Preference number: 4 (lower is better) Translates to: LSIKGSKLAATMFFQLESEISLP*TFTVLI Trigger: GATTAGTACAGTGAAAGTCCAAGGCAATGATATCTC...ACTTTCAAGTTGAAAGAACATGGTGGCTGCTAATTTGGAACCTTTTATACTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| 3UTR CAA 72 bp | AAAGTCAGCTTGCATGAGCATCATAGCCTATCTACCTaGAAGTCATATCACACATACTATAAGCAATTTACA | + |
|
Preference number: 4 (lower is better) Translates to: KVSLHEHHSLST*KSYHTYYKQFT Trigger: TGTAAATTGCTTATAGTATGTGTGATATGACTTCAAGGTAGATAGGCTATGATGCTCATGCAAGCTGACTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000207256.2 |
||
| 3UTR CAA 72 bp | CCAGATACTTCTCCTTTGCATTTCTATCCACTTCCATaGTCATGGTTACATAAAAAGTTATATTCCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PDTSPLHFYPLP*SWLHKKLYSQR Trigger: CCTTTGGGAATATAACTTTTTATGTAACCATGACAATGGAAGTGGATAGAAATGCAAAGGAGAAGTATCTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207256.2 |
||
| CDS TCA 90 bp | GTGAGGCTTCAAAGGCCTGCATCCTCCGAGCATGGCTGTTGGCATTaGCTTTCAGATAGGCCTGGGCCTTGTGTTCCTGAAGCTCCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: VRLQRPASSEHGCWH*LSDRPGPCVPEAPR Trigger: ACGGGGAGCTTCAGGAACACAAGGCCCAGGCCTATCTGAAAGTCAATGCCAACAGCCATGCTCGGAGGATGCAGGCCTTTGAAGCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000109647.3 ENSMUST00000208926.2 |
||
| CDS GCA 90 bp | CTGCTGGGAACCACCGATGATGCGTTCTTTCGAGGCTTCGTGTCTTaGAGCCACATAGGTGAGGCTTCAAAGGCCTGCATCCTCCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLGTTDDAFFRGFVS*SHIGEASKACILRA Trigger: TGCTCGGAGGATGCAGGCCTTTGAAGCCTCACCTATGTGGCTGCAAGACACGAAGCCTCGAAAGAACGCATCATCGGTGGTTCCCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000109647.3 ENSMUST00000208926.2 |
||
| CDS GCA 90 bp | GGCTGGAGGTGGAGTGCATTCGTTGGTTGGCAGAGTTGTGGACGCTaGTGGGAACCACCGATGATGCGTTCTTTCGAGGCTTCGTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GWRWSAFVGWQSCGR*WEPPMMRSFEASCL Trigger: AAGACACGAAGCCTCGAAAGAACGCATCATCGGTGGTTCCCAGCAGCGTCCACAACTCTGCCAACCAACGAATGCACTCCACCTCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000109647.3 ENSMUST00000208926.2 |
||
| CDS CCA 90 bp | TTTTGGCTACCGCTTGAGGGCTGGAGGTGGAGTGCATTCGTTGGTTaGCAGAGTTGTGGACGCTGCTGGGAACCACCGATGATGCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FWLPLEGWRWSAFVG*QSCGRCWEPPMMRS Trigger: AGAACGCATCATCGGTGGTTCCCAGCAGCGTCCACAACTCTGCCAACCAACGAATGCACTCCACCTCCAGCCCTCAAGCGGTAGCCAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000109647.3 ENSMUST00000208926.2 |
||
| CDS TCA 90 bp | GTCCTCTGGCCCCCGAAGGAACCACCACTGGATCTCCAGGTACACTaGAGCAGAGCCGCTTTGGAAAGCACAGGACATCTCCACATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VLWPPKEPPLDLQVH*SRAALESTGHLHIL Trigger: CAAAATGTGGAGATGTCCTGTGCTTTCCAAAGCGGCTCTGCTTCAGTGTACCTGGAGATCCAGTGGTGGTTCCTTCGGGGGCCAGAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000109647.3 ENSMUST00000208926.2 |
||
| CDS CCA 90 bp | TGGAGGTGGAGTGCATTCGTTGGTTGGCAGAGTTGTGGACGCTGCTaGGAACCACCGATGATGCGTTCTTTCGAGGCTTCGTGTCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: WRWSAFVGWQSCGRC*EPPMMRSFEASCLA Trigger: TGCAAGACACGAAGCCTCGAAAGAACGCATCATCGGTGGTTCCCAGCAGCGTCCACAACTCTGCCAACCAACGAATGCACTCCACCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000109647.3 ENSMUST00000208926.2 |
||
| CDS CCA 90 bp | CTGATTGTGGACTTTGCTTGGGGATTTTGGCTACCGCTTGAGGGCTaGAGGTGGAGTGCATTCGTTGGTTGGCAGAGTTGTGGACGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LIVDFAWGFWLPLEG*RWSAFVGWQSCGRC Trigger: GCAGCGTCCACAACTCTGCCAACCAACGAATGCACTCCACCTCCAGCCCTCAAGCGGTAGCCAAAATCCCCAAGCAAAGTCCACAATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000109647.3 ENSMUST00000208926.2 |
||
| CDS CCA 90 bp | CAGGCGATTTGCTCTTTGCTGATTGTGGACTTTGCTTGGGGATTTTaGCTACCGCTTGAGGGCTGGAGGTGGAGTGCATTCGTTGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QAICSLLIVDFAWGF*LPLEGWRWSAFVGW Trigger: CCAACCAACGAATGCACTCCACCTCCAGCCCTCAAGCGGTAGCCAAAATCCCCAAGCAAAGTCCACAATCAGCAAAGAGCAAATCGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208926.2 |
||
| CDS-3UTR CAA 90 bp | CATTTAGCTATTTGTTTTGTTCCTCAGCTGGGGTGCTGTATGAGACAGTTTGTGTGCAGCCTCCGTGCCTaGCTCCAGGTCCTCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HLAICFVPQLGCCMRQFVCSLRA*LQVLWP Trigger: GGGCCAGAGGACCTGGAGCAAGGCACGGAGGCTGCA...CACAAACTGTCTCATACAGCACCCCAGCTGAGGAACAAAACAAATAGCTAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
||
| CDS-3UTR CAA 90 bp | TGGCTGTCCTGGTTAGACCTGTATACCAGGTTGTCCTCAAACTCAGAGATTCTCATCTTGGTCCCATCGTaGTCCGGGTCTCTGTCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: WLSWLDLYTRLSSNSEILILVPS*SGSLSG Trigger: ACCCGACAGAGACCCGGACAACGATGGGACCAAGAT...GAGAATCTCTGAGTTTGAGGACAACCTGGTATACAGGTCTAACCAGGACAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR CAA 90 bp | CAGGGTCCCCTGCCCAGGGAATGGTTCTGTGTATACTTAGGAGAGGTCTCCTATGATTGTGGACTTTGCTaGGGGATTTTGGCTACCGCT | + |
|
Preference number: 5 (lower is better) Translates to: QGPLPREWFCVYLGEVSYDCGLC*GILATA Trigger: AGCGGTAGCCAAAATCCCCAAGCAAAGTCCACAATC...ATAGGAGACCTCTCCTAAGTATACACAGAACCATTCCCTGGGCAGGGGACCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS CCA 90 bp | GCACCCTTCACAAAGCCACAAACAAGAAGCAGGACAGAAAGTCCATaGCTTGTAGCTATCCTCGCACCTGATTGTGGACTTTGCTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: APFTKPQTRSRTESP*LVAILAPDCGLCLG Trigger: CCCCAAGCAAAGTCCACAATCAGGTGCGAGGATAGCTACAAGCCATGGACTTTCTGTCCTGCTTCTTGTTTGTGGCTTTGTGAAGGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109645.9 |
||
| CDS-3UTR CAA 90 bp | TTATACATTCCAGGGTCCCCTGCCCAGGGAATGGTTCTGTGTATACTTAGGAGAGGTGGAGTGCATTCGTaGGTTGGCAGAGTTGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LYIPGSPAQGMVLCILRRGGVHS*VGRVVD Trigger: GTCCACAACTCTGCCAACCAACGAATGCACTCCACC...TCTCCTAAGTATACACAGAACCATTCCCTGGGCAGGGGACCCTGGAATGTATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS-3UTR CAA 90 bp | ATGTATATGAATATAAACCTTCCAGGATTGACAAGGATTGGCCATAATTGGCACTGCAGCCTCCGTGCCTaGCTCCAGGTCCTCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: MYMNINLPGLTRIGHNWHCSLRA*LQVLWP Trigger: GGGCCAGAGGACCTGGAGCAAGGCACGGAGGCTGCA...GTGCCAATTATGGCCAATCCTTGTCAATCCTGGAAGGTTTATATTCATATACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109645.9 |
||
| CDS-3UTR CAA 90 bp | ATTCTCCATAGGCAAACCCAGAAACATATCTCACATGCTATTCTAGACATAATATGCAGCCTCCGTGCCTaGCTCCAGGTCCTCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ILHRQTQKHISHAILDIICSLRA*LQVLWP Trigger: GGGCCAGAGGACCTGGAGCAAGGCACGGAGGCTGCA...TATTATGTCTAGAATAGCATGTGAGATATGTTTCTGGGTTTGCCTATGGAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
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| CDS-3UTR CAA 90 bp | CAGCATTTAGCTATTTGTTTTGTTCCTCAGCTGGGGTGCTGTATGAGACAGTTTATCTTGGTCCCATCGTaGTCCGGGTCTCTGTCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QHLAICFVPQLGCCMRQFILVPS*SGSLSG Trigger: ACCCGACAGAGACCCGGACAACGATGGGACCAAGAT...AAACTGTCTCATACAGCACCCCAGCTGAGGAACAAAACAAATAGCTAAATGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
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| CDS-3UTR CAA 90 bp | CATTTAGCTATTTGTTTTGTTCCTCAGCTGGGGTGCTGTATGAGACAGTTTGTGATCTTGGTCCCATCGTaGTCCGGGTCTCTGTCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HLAICFVPQLGCCMRQFVILVPS*SGSLSG Trigger: ACCCGACAGAGACCCGGACAACGATGGGACCAAGAT...CACAAACTGTCTCATACAGCACCCCAGCTGAGGAACAAAACAAATAGCTAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
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| CDS-3UTR CAA 90 bp | ATGGAAATATTTAGTATACTGATGTCATTCAGGCCAACTCCTGAGCAGTCAGTGCGTTGGTTGGCAGAGTaGTGGACGCTGCTGGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: MEIFSILMSFRPTPEQSVRWLAE*WTLLGT Trigger: GGTTCCCAGCAGCGTCCACAACTCTGCCAACCAACG...CACTGACTGCTCAGGAGTTGGCCTGAATGACATCAGTATACTAAATATTTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
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| CDS GCA 90 bp | ACTGAAGCAGAGCCGCTTTGGAAAGCACAGGACATCTCCACATTTTaGCCTTCGGTAGCAGTCACATTTCTCGGCAACTCGGTAAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: TEAEPLWKAQDISTF*PSVAVTFLGNSVNF Trigger: AAAATTTACCGAGTTGCCGAGAAATGTGACTGCTACCGAAGGGCAAAATGTGGAGATGTCCTGTGCTTTCCAAAGCGGCTCTGCTTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000109647.3 ENSMUST00000208926.2 |
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| CDS-3UTR CAA 90 bp | CAGGGTCCCCTGCCCAGGGAATGGTTCTGTGTATACTTAGGAGAGGTCTCCTATGGAGATATCATTGCCTaGGACTTTCACTGTACTAAT | + |
|
Preference number: 5 (lower is better) Translates to: QGPLPREWFCVYLGEVSYGDIIA*DFHCTN Trigger: ATTAGTACAGTGAAAGTCCAAGGCAATGATATCTCC...ATAGGAGACCTCTCCTAAGTATACACAGAACCATTCCCTGGGCAGGGGACCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
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| CDS-3UTR CAA 90 bp | TGCTGTATGAGACAGTTTGTGGTTCTTAGGTTTTCCATCTTTGTTTGCTTCTTGCGTTGGTTGGCAGAGTaGTGGACGCTGCTGGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: CCMRQFVVLRFSIFVCFLRWLAE*WTLLGT Trigger: GGTTCCCAGCAGCGTCCACAACTCTGCCAACCAACG...CAAGAAGCAAACAAAGATGGAAAACCTAAGAACCACAAACTGTCTCATACAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
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| CDS-3UTR CAA 90 bp | TTTGCTGTCCGCTCCGTAGATTTTACAGGCGATTTGCTCTTTGCTTTAAGAAGAGGTGGAGTGCATTCGTaGGTTGGCAGAGTTGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FAVRSVDFTGDLLFALRRGGVHS*VGRVVD Trigger: GTCCACAACTCTGCCAACCAACGAATGCACTCCACC...TCTTCTTAAAGCAAAGAGCAAATCGCCTGTAAAATCTACGGAGCGGACAGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109645.9 |
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| CDS-3UTR CAA 90 bp | TTATACATTCCAGGGTCCCCTGCCCAGGGAATGGTTCTGTGTATACTTAGGAGACTCGGTAAATTTTGCTaGAGAAGAAAGCCCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LYIPGSPAQGMVLCILRRLGKFC*RRKPLL Trigger: CAACAAGGGCTTTCTTCTCAAGCAAAATTTACCGAG...TCTCCTAAGTATACACAGAACCATTCCCTGGGCAGGGGACCCTGGAATGTATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
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| CDS-3UTR CAA 90 bp | CAGAAACATATCTCACATGCTATTCTAGACATAATAGAGGTGACTGATAGTTCACGTTGGTTGGCAGAGTaGTGGACGCTGCTGGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: QKHISHAILDIIEVTDSSRWLAE*WTLLGT Trigger: GGTTCCCAGCAGCGTCCACAACTCTGCCAACCAACG...TGAACTATCAGTCACCTCTATTATGTCTAGAATAGCATGTGAGATATGTTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
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| CDS-3UTR CAA 90 bp | ATGTCATTCAGGCCAACTCCTGAGCAGTCAGTGAAATGCAGGTTTTATTTGTTGGATTGTGGACTTTGCTaGGGGATTTTGGCTACCGCT | + |
|
Preference number: 5 (lower is better) Translates to: MSFRPTPEQSVKCRFYLLDCGLC*GILATA Trigger: AGCGGTAGCCAAAATCCCCAAGCAAAGTCCACAATC...CAACAAATAAAACCTGCATTTCACTGACTGCTCAGGAGTTGGCCTGAATGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
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| CDS-3UTR CAA 90 bp | TTAGCTATTTGTTTTGTTCCTCAGCTGGGGTGCTGTATGAGACAGTTTGTGGTTGATTGTGGACTTTGCTaGGGGATTTTGGCTACCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LAICFVPQLGCCMRQFVVDCGLC*GILATA Trigger: AGCGGTAGCCAAAATCCCCAAGCAAAGTCCACAATC...AACCACAAACTGTCTCATACAGCACCCCAGCTGAGGAACAAAACAAATAGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
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| CDS-3UTR CAA 90 bp | AGGCAAACCCAGAAACATATCTCACATGCTATTCTAGACATAATAGAGGTGACTGGACATCTCCACATTTaGCCCTTCGGTAGCAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RQTQKHISHAILDIIEVTGHLHI*PFGSSH Trigger: GTGACTGCTACCGAAGGGCAAAATGTGGAGATGTCC...AGTCACCTCTATTATGTCTAGAATAGCATGTGAGATATGTTTCTGGGTTTGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
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| CDS-3UTR CAA 90 bp | ATGTCATTCAGGCCAACTCCTGAGCAGTCAGTGAAATGCAGGTTTTATTTGTTGCAGGCGATTTGCTCTTaGCTGATTGTGGACTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: MSFRPTPEQSVKCRFYLLQAICS*LIVDFA Trigger: AGCAAAGTCCACAATCAGCAAAGAGCAAATCGCCTG...CAACAAATAAAACCTGCATTTCACTGACTGCTCAGGAGTTGGCCTGAATGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208926.2 |
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| CDS-3UTR CAA 90 bp | AAGATTAGGTGTCCCTCGTTAGGAAATTGGTGGAATCCATGGAAATATTTAGTAGGACATCTCCACATTTaGCCCTTCGGTAGCAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: KIRCPSLGNWWNPWKYLVGHLHI*PFGSSH Trigger: GTGACTGCTACCGAAGGGCAAAATGTGGAGATGTCC...TACTAAATATTTCCATGGATTCCACCAATTTCCTAACGAGGGACACCTAATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
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| CDS-3UTR CAA 90 bp | ATCAGCAACTTCCCAAAGAAAATATTATCAATAAAGCGTGTGACAGTGTCTTCAGGTGGAGTGCATTCGTaGGTTGGCAGAGTTGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ISNFPKKILSIKRVTVSSGGVHS*VGRVVD Trigger: GTCCACAACTCTGCCAACCAACGAATGCACTCCACC...TGAAGACACTGTCACACGCTTTATTGATAATATTTTCTTTGGGAAGTTGCTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
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| CDS-3UTR CAA 90 bp | ATACTGATGTCATTCAGGCCAACTCCTGAGCAGTCAGTGAAATGCAGGTTTTATCTCGGTAAATTTTGCTaGAGAAGAAAGCCCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ILMSFRPTPEQSVKCRFYLGKFC*RRKPLL Trigger: CAACAAGGGCTTTCTTCTCAAGCAAAATTTACCGAG...ATAAAACCTGCATTTCACTGACTGCTCAGGAGTTGGCCTGAATGACATCAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
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| CDS-3UTR CAA 90 bp | ATTCTCCATAGGCAAACCCAGAAACATATCTCACATGCTATTCTAGACATAATACTGAAGAAGACAGGTTaGGCCTTGGTTTCCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ILHRQTQKHISHAILDIILKKTG*ALVSSQ Trigger: CTGGGAGGAAACCAAGGCCAAACCTGTCTTCTTCAG...TATTATGTCTAGAATAGCATGTGAGATATGTTTCTGGGTTTGCCTATGGAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
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| CDS-3UTR CAA 90 bp | AGGTTTTCCATCTTTGTTTGCTTCTTGAAGATTAGGTGTCCCTCGTTAGGAAATGGTGCAGAATGGTGCTaGGAGTATAGGGTCAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: RFSIFVCFLKIRCPSLGNGAEWC*EYRVNF Trigger: AAAGTTGACCCTATACTCCAAGCACCATTCTGCACC...ATTTCCTAACGAGGGACACCTAATCTTCAAGAAGCAAACAAAGATGGAAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208926.2 |
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| CDS-3UTR CAA 90 bp | ATACTGATGTCATTCAGGCCAACTCCTGAGCAGTCAGTGAAATGCAGGTTTTATGGAGATATCATTGCCTaGGACTTTCACTGTACTAAT | + |
|
Preference number: 5 (lower is better) Translates to: ILMSFRPTPEQSVKCRFYGDIIA*DFHCTN Trigger: ATTAGTACAGTGAAAGTCCAAGGCAATGATATCTCC...ATAAAACCTGCATTTCACTGACTGCTCAGGAGTTGGCCTGAATGACATCAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
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| CDS-3UTR CAA 90 bp | AAGATTAGGTGTCCCTCGTTAGGAAATTGGTGGAATCCATGGAAATATTTAGTAGTGCTCATGAATGTCTaGGCATGCACTGATTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KIRCPSLGNWWNPWKYLVVLMNV*ACTDCG Trigger: TCCACAATCAGTGCATGCCAAGACATTCATGAGCAC...TACTAAATATTTCCATGGATTCCACCAATTTCCTAACGAGGGACACCTAATCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207256.2 |
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| CDS-3UTR CAA 90 bp | CAGAAACATATCTCACATGCTATTCTAGACATAATAGAGGTGACTGATAGTTCAGAGAGTGGGCTTCTATaGCTGAAGACACCACATACT | + |
|
Preference number: 5 (lower is better) Translates to: QKHISHAILDIIEVTDSSESGLL*LKTPHT Trigger: AGTATGTGGTGTCTTCAGCAATAGAAGCCCACTCTC...TGAACTATCAGTCACCTCTATTATGTCTAGAATAGCATGTGAGATATGTTTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
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| CDS-3UTR CAA 90 bp | ATCTTTGTTTGCTTCTTGAAGATTAGGTGTCCCTCGTTAGGAAATTGGTGGAATGATTTTACAGGCGATTaGCTCTTTGCTGATTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: IFVCFLKIRCPSLGNWWNDFTGD*LFADCG Trigger: TCCACAATCAGCAAAGAGCAAATCGCCTGTAAAATC...ATTCCACCAATTTCCTAACGAGGGACACCTAATCTTCAAGAAGCAAACAAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208926.2 |
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| CDS-3UTR CAA 90 bp | AGCATATACCCTTTTATTACAAGCATGGTGAACATTACTGATACGGGTACACATCTCGGTAAATTTTGCTaGAGAAGAAAGCCCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SIYPFITSMVNITDTGTHLGKFC*RRKPLL Trigger: CAACAAGGGCTTTCTTCTCAAGCAAAATTTACCGAG...ATGTGTACCCGTATCAGTAATGTTCACCATGCTTGTAATAAAAGGGTATATGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109645.9 |
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| CDS-3UTR CAA 90 bp | ATCTTTGTTTGCTTCTTGAAGATTAGGTGTCCCTCGTTAGGAAATTGGTGGAATGGAGATATCATTGCCTaGGACTTTCACTGTACTAAT | + |
|
Preference number: 5 (lower is better) Translates to: IFVCFLKIRCPSLGNWWNGDIIA*DFHCTN Trigger: ATTAGTACAGTGAAAGTCCAAGGCAATGATATCTCC...ATTCCACCAATTTCCTAACGAGGGACACCTAATCTTCAAGAAGCAAACAAAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109645.9 ENSMUST00000208926.2 |
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| CDS CCA 72 bp | CCGCTTGAGGGCTGGAGGTGGAGTGCATTCGTTGGTTaGCAGAGTTGTGGACGCTGCTGGGAACCACCGATG | + |
|
Preference number: 6 (lower is better) Translates to: PLEGWRWSAFVG*QSCGRCWEPPM Trigger: CATCGGTGGTTCCCAGCAGCGTCCACAACTCTGCCAACCAACGAATGCACTCCACCTCCAGCCCTCAAGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000109647.3 ENSMUST00000208926.2 |
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| CDS CAA 72 bp | GGGCTGGAGGTGGAGTGCATTCGTTGGTTGGCAGAGTaGTGGACGCTGCTGGGAACCACCGATGATGCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GLEVECIRWLAE*WTLLGTTDDAF Trigger: GAACGCATCATCGGTGGTTCCCAGCAGCGTCCACAACTCTGCCAACCAACGAATGCACTCCACCTCCAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000109647.3 ENSMUST00000208926.2 |
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| CDS TCA 72 bp | CCCCCGAAGGAACCACCACTGGATCTCCAGGTACACTaGAGCAGAGCCGCTTTGGAAAGCACAGGACATCTC | + |
|
Preference number: 6 (lower is better) Translates to: PPKEPPLDLQVH*SRAALESTGHL Trigger: GAGATGTCCTGTGCTTTCCAAAGCGGCTCTGCTTCAGTGTACCTGGAGATCCAGTGGTGGTTCCTTCGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000109647.3 ENSMUST00000208926.2 |
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| CDS TCA 72 bp | GTTCTTTCGAGGCTTCGTGTCTTGCAGCCACATAGGTaGGGCTTCAAAGGCCTGCATCCTCCGAGCATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VLSRLRVLQPHR*GFKGLHPPSMA Trigger: AGCCATGCTCGGAGGATGCAGGCCTTTGAAGCCTCACCTATGTGGCTGCAAGACACGAAGCCTCGAAAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000109647.3 ENSMUST00000208926.2 |
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| CDS CCA 72 bp | AGTGCATTCGTTGGTTGGCAGAGTTGTGGACGCTGCTaGGAACCACCGATGATGCGTTCTTTCGAGGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: SAFVGWQSCGRC*EPPMMRSFEAS Trigger: CGAAGCCTCGAAAGAACGCATCATCGGTGGTTCCCAGCAGCGTCCACAACTCTGCCAACCAACGAATGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000109647.3 ENSMUST00000208926.2 |
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| CDS CCA 72 bp | CTGGAGGTGGAGTGCATTCGTTGGTTGGCAGAGTTGTaGACGCTGCTGGGAACCACCGATGATGCGTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LEVECIRWLAEL*TLLGTTDDAFF Trigger: AAAGAACGCATCATCGGTGGTTCCCAGCAGCGTCCACAACTCTGCCAACCAACGAATGCACTCCACCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000109647.3 ENSMUST00000208926.2 |
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| CDS CCA 72 bp | TCCTCGCACCTGATTGTGGACTTTGCTTGGGGATTTTaGCTACCGCTTGAGGGCTGGAGGTGGAGTGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: SSHLIVDFAWGF*LPLEGWRWSAF Trigger: GAATGCACTCCACCTCCAGCCCTCAAGCGGTAGCCAAAATCCCCAAGCAAAGTCCACAATCAGGTGCGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109645.9 |
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| CDS TCA 72 bp | CAAAGGCCTGCATCCTCCGAGCATGGCTGTTGGCATTaGCTTTCAGATAGGCCTGGGCCTTGTGTTCCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: QRPASSEHGCWH*LSDRPGPCVPE Trigger: TTCAGGAACACAAGGCCCAGGCCTATCTGAAAGTCAATGCCAACAGCCATGCTCGGAGGATGCAGGCCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000109647.3 ENSMUST00000208926.2 |
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| CDS GCA 72 bp | GTGTCTTGCAGCCACATAGGTGAGGCTTCAAAGGCCTaGATCCTCCGAGCATGGCTGTTGGCATTGACTTTC | + |
|
Preference number: 6 (lower is better) Translates to: VSCSHIGEASKA*ILRAWLLALTF Trigger: GAAAGTCAATGCCAACAGCCATGCTCGGAGGATGCAGGCCTTTGAAGCCTCACCTATGTGGCTGCAAGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000109647.3 ENSMUST00000208926.2 |
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| CDS GCA 72 bp | ACCACCGATGATGCGTTCTTTCGAGGCTTCGTGTCTTaGAGCCACATAGGTGAGGCTTCAAAGGCCTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: TTDDAFFRGFVS*SHIGEASKACI Trigger: GATGCAGGCCTTTGAAGCCTCACCTATGTGGCTGCAAGACACGAAGCCTCGAAAGAACGCATCATCGGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000109647.3 ENSMUST00000208926.2 |
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| CDS CCA 72 bp | GACTTTGCTTGGGGATTTTGGCTACCGCTTGAGGGCTaGAGGTGGAGTGCATTCGTTGGTTGGCAGAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: DFAWGFWLPLEG*RWSAFVGWQSC Trigger: ACAACTCTGCCAACCAACGAATGCACTCCACCTCCAGCCCTCAAGCGGTAGCCAAAATCCCCAAGCAAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000109647.3 ENSMUST00000208926.2 |
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| CDS CAA 72 bp | CCTTGGACTTTCACTGTACTAATCTTGGTCCCATCGTaGTCCGGGTCTCTGTCGGGTAAGAGCTCCACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PWTFTVLILVPS*SGSLSGKSSTC Trigger: GCAGGTGGAGCTCTTACCCGACAGAGACCCGGACAACGATGGGACCAAGATTAGTACAGTGAAAGTCCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000109647.3 ENSMUST00000208926.2 |
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| CDS GCA 72 bp | GAGCCGCTTTGGAAAGCACAGGACATCTCCACATTTTaGCCTTCGGTAGCAGTCACATTTCTCGGCAACTCG | + |
|
Preference number: 6 (lower is better) Translates to: EPLWKAQDISTF*PSVAVTFLGNS Trigger: CGAGTTGCCGAGAAATGTGACTGCTACCGAAGGGCAAAATGTGGAGATGTCCTGTGCTTTCCAAAGCGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000109647.3 ENSMUST00000208926.2 |
||
| CDS CCA 72 bp | TTATGCAAGCTGATTGTGGACTTTGCTTGGGGATTTTaGCTACCGCTTGAGGGCTGGAGGTGGAGTGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: LCKLIVDFAWGF*LPLEGWRWSAF Trigger: GAATGCACTCCACCTCCAGCCCTCAAGCGGTAGCCAAAATCCCCAAGCAAAGTCCACAATCAGCTTGCATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS CAA 72 bp | AGAGCCGCTTTGGAAAGCACAGGACATCTCCACATTTaGCCCTTCGGTAGCAGTCACATTTCTCGGCAACTC | + |
|
Preference number: 6 (lower is better) Translates to: RAALESTGHLHI*PFGSSHISRQL Trigger: GAGTTGCCGAGAAATGTGACTGCTACCGAAGGGCAAAATGTGGAGATGTCCTGTGCTTTCCAAAGCGGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000109647.3 ENSMUST00000208926.2 |
||
| CDS TCA 72 bp | AGAAGACAGGTTTGGCCTTGGTTTCCTCCCAGTAGGTaGGAGTGGGCTTCTATTGCTGAAGACACCACATAC | + |
|
Preference number: 6 (lower is better) Translates to: RRQVWPWFPPSR*EWASIAEDTTY Trigger: GTATGTGGTGTCTTCAGCAATAGAAGCCCACTCTCACCTACTGGGAGGAAACCAAGGCCAAACCTGTCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS TCA 72 bp | GGTCAGGAGATCACTGCTCAGGAAATCCAATTCATCTaGAGAAGACAGGTTTGGCCTTGGTTTCCTCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GQEITAQEIQFI*RRQVWPWFPPS Trigger: ACTGGGAGGAAACCAAGGCCAAACCTGTCTTCTTCAGATGAATTGGATTTCCTGAGCAGTGATCTCCTGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS CAA 72 bp | CTTGGTTTCCTCCCAGTAGGTGAGAGTGGGCTTCTATaGCTGAAGACACCACATACTTCGGATATAGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LGFLPVGESGLL*LKTPHTSDIGL Trigger: GAGACCTATATCCGAAGTATGTGGTGTCTTCAGCAATAGAAGCCCACTCTCACCTACTGGGAGGAAACCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109647.3 |
||
| CDS CAA 72 bp | TTTGGATATCTGAAGCTTGTGGGAGATATCATTGCCTaGGACTTTCACTGTACTAATCTTGGTCCCATCGTT | + |
|
Preference number: 6 (lower is better) Translates to: FGYLKLVGDIIA*DFHCTNLGPIV Trigger: AACGATGGGACCAAGATTAGTACAGTGAAAGTCCAAGGCAATGATATCTCCCACAAGCTTCAGATATCCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109645.9 ENSMUST00000109647.3 ENSMUST00000208926.2 |
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