Pregenerated sensors for VSIR (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020101

Ensembl transcript IDs: ENSMUST00000020301.14, ENSMUST00000105459.2, ENSMUST00000105460.8, ENSMUST00000170507.8

Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	AGCCCTACAGGAGGAAGCTGGGCAGGAAGCGAGTGGTTCTTCTGCTaGGGGCCTCCTCTCCTTTCCACGGAGCTGCAGCCATGCAGGGGT	+
Preference number: 1 (lower is better) Translates to: SPTGGSWAGSEWFFC*GPPLLSTELQPCRG Trigger: ACCCCTGCATGGCTGCAGCTCCGTGGAAAGGAGAGGAGGCCCCCAGCAGAAGAACCACTCGCTTCCTGCCCAGCTTCCTCCTGTAGGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 90 bp	ATGAGAGCCCAGAGCCACGAAGCTGGCAGGCCCTCAGGTTGCTGGTaGAAGGCTGCTGAGATGCTCCTCTGGTGGGACATAGGCCAGCCA	+
Preference number: 1 (lower is better) Translates to: MRAQSHEAGRPSGCW*KAAEMLLWWDIGQP Trigger: TGGCTGGCCTATGTCCCACCAGAGGAGCATCTCAGCAGCCTTCCACCAGCAACCTGAGGGCCTGCCAGCTTCGTGGCTCTGGGCTCTCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 90 bp	GTAATGAGAGCCCAGAGCCACGAAGCTGGCAGGCCCTCAGGTTGCTaGTGGAAGGCTGCTGAGATGCTCCTCTGGTGGGACATAGGCCAG	+
Preference number: 1 (lower is better) Translates to: VMRAQSHEAGRPSGC*WKAAEMLLWWDIGQ Trigger: CTGGCCTATGTCCCACCAGAGGAGCATCTCAGCAGCCTTCCACCAGCAACCTGAGGGCCTGCCAGCTTCGTGGCTCTGGGCTCTCATTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR TCA 90 bp	TCGCTCTCTAGGCTTTTGCTGGTACCAGGAACCCAATATGGCCCTTaGGGCTACAGGGCTCCTCCCTCCTCTTGGGGAACTCAGTTCCCC	+
Preference number: 1 (lower is better) Translates to: SLSRLLLVPGTQYGP*GYRAPPSSWGTQFP Trigger: GGGGAACTGAGTTCCCCAAGAGGAGGGAGGAGCCCTGTAGCCTCAAGGGCCATATTGGGTTCCTGGTACCAGCAAAAGCCTAGAGAGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR TCA 90 bp	CTGAAGACTCCCCCTGTGTGCCCAGGTCATGCCAAACCCTGGAGATaGGAGCCAAGAGTAGTATCGGACCAGGGGCAAGCTCTTCTGTGT	+
Preference number: 1 (lower is better) Translates to: LKTPPVCPGHAKPWR*EPRVVSDQGQALLC Trigger: ACACAGAAGAGCTTGCCCCTGGTCCGATACTACTCTTGGCTCTCATCTCCAGGGTTTGGCATGACCTGGGCACACAGGGGGAGTCTTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR GCA 90 bp	AGGAGCTTTCCTACCCATGCCCAGTTCAGCCCAGCCAGTGGAAGCTaGAAGAAGACATATGGTACCACTGGGCTGCTGCTCTCCCAGACT	+
Preference number: 1 (lower is better) Translates to: RSFPTHAQFSPASGS*KKTYGTTGLLLSQT Trigger: AGTCTGGGAGAGCAGCAGCCCAGTGGTACCATATGTCTTCTTGCAGCTTCCACTGGCTGGGCTGAACTGGGCATGGGTAGGAAAGCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR GCA 90 bp	TTAGTTCAGCTCCCACCATGGCAGGTTCAGCGCTGGCATGGACACTaGTCTAGCTCACACCCAGGAAAGCCTTTTCCAGGAGGGAGCATC	+
Preference number: 1 (lower is better) Translates to: LVQLPPWQVQRWHGH*SSSHPGKPFPGGSI Trigger: GATGCTCCCTCCTGGAAAAGGCTTTCCTGGGTGTGAGCTAGAGCAGTGTCCATGCCAGCGCTGAACCTGCCATGGTGGGAGCTGAACTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 90 bp	CTCATCATCCCCATCATCCTCTCGCCACCCTCCCTCCGTGTCCACTaGTCCAGGCCTCACATTGCTCAAGACACTAATGAGCTCACAGTG	+
Preference number: 1 (lower is better) Translates to: LIIPIILSPPSLRVH*SRPHIAQDTNELTV Trigger: CACTGTGAGCTCATTAGTGTCTTGAGCAATGTGAGGCCTGGACCAGTGGACACGGAGGGAGGGTGGCGAGAGGATGATGGGGATGATGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 90 bp	GAAACTCTCTCTTCTCTCCCCACCCATCTGTCCTCAGGGAATGAATaGGGTTCTCCCTGGCTGCAGGCCCAGAACAGGAGCTTTCCTACC	+
Preference number: 1 (lower is better) Translates to: ETLSSLPTHLSSGNE*GSPWLQAQNRSFPT Trigger: GGTAGGAAAGCTCCTGTTCTGGGCCTGCAGCCAGGGAGAACCCCATTCATTCCCTGAGGACAGATGGGTGGGGAGAGAAGAGAGAGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 90 bp	CCATGCCCAGTTCAGCCCAGCCAGTGGAAGCTGCAAGAAGACATATaGTACCACTGGGCTGCTGCTCTCCCAGACTTAGAGCTACTTTCC	+
Preference number: 1 (lower is better) Translates to: PCPVQPSQWKLQEDI*YHWAAALPDLELLS Trigger: GGAAAGTAGCTCTAAGTCTGGGAGAGCAGCAGCCCAGTGGTACCATATGTCTTCTTGCAGCTTCCACTGGCTGGGCTGAACTGGGCATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 90 bp	CTTCAGCAGGGTCAGCTCGGTCCACAACAGCTACCAGTGGCCCTTTaGCTTGTCAAGAAGCCCCTGCTTTATCAGACACCTTTCCTCCTG	+
Preference number: 1 (lower is better) Translates to: LQQGQLGPQQLPVAL*LVKKPLLYQTPFLL Trigger: CAGGAGGAAAGGTGTCTGATAAAGCAGGGGCTTCTTGACAAGCCAAAGGGCCACTGGTAGCTGTTGTGGACCGAGCTGACCCTGCTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 90 bp	CTGGCCCAGACAAAGCTAGATCCCCAGAGTGGAATCCTGAGGTCCTaGTTCAAGCCAGTTACCCAAGGACTCTGTCAGCTATCTGCTCCC	+
Preference number: 1 (lower is better) Translates to: LAQTKLDPQSGILRS*FKPVTQGLCQLSAP Trigger: GGGAGCAGATAGCTGACAGAGTCCTTGGGTAACTGGCTTGAACCAGGACCTCAGGATTCCACTCTGGGGATCTAGCTTTGTCTGGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 90 bp	AGCCAGATGAGCCGTATTCTCTGTGATCTGGGACTGGCACTCAGCTaGGCTGTCTGTGTTTCAAGAGACTTTTGCACTGCCCTCCCTTCC	+
Preference number: 1 (lower is better) Translates to: SQMSRILCDLGLALS*AVCVSRDFCTALPS Trigger: GGAAGGGAGGGCAGTGCAAAAGTCTCTTGAAACACAGACAGCCCAGCTGAGTGCCAGTCCCAGATCACAGAGAATACGGCTCATCTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR TCA 90 bp	TTCCTGAACCTGACATGTACTTCCTGTTTCAAAGCCTCTGGCCACTaGGCTCTGTGGACGGCCATACAGGTAATGAGAGCCCAGAGCCAC	+
Preference number: 1 (lower is better) Translates to: FLNLTCTSCFKASGH*ALWTAIQVMRAQSH Trigger: GTGGCTCTGGGCTCTCATTACCTGTATGGCCGTCCACAGAGCTCAGTGGCCAGAGGCTTTGAAACAGGAAGTACATGTCAGGTTCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR TCA 90 bp	AGCAGCAAGCATGCAGAACATGAGCCAGATGAGCCGTATTCTCTGTaGTCTGGGACTGGCACTCAGCTGGGCTGTCTGTGTTTCAAGAGA	+
Preference number: 1 (lower is better) Translates to: SSKHAEHEPDEPYSL*SGTGTQLGCLCFKR Trigger: TCTCTTGAAACACAGACAGCCCAGCTGAGTGCCAGTCCCAGATCACAGAGAATACGGCTCATCTGGCTCATGTTCTGCATGCTTGCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR GCA 90 bp	TGCTTTAAAATCCTTTCTGAAGACTCCCCCTGTGTGCCCAGGTCATaGCAAACCCTGGAGATGAGAGCCAAGAGTAGTATCGGACCAGGG	+
Preference number: 1 (lower is better) Translates to: CFKILSEDSPCVPRS*QTLEMRAKSSIGPG Trigger: CCCTGGTCCGATACTACTCTTGGCTCTCATCTCCAGGGTTTGGCATGACCTGGGCACACAGGGGGAGTCTTCAGAAAGGATTTTAAAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 90 bp	ACAGTGGTTCCTGAACCTGACATGTACTTCCTGTTTCAAAGCCTCTaGCCACTGAGCTCTGTGGACGGCCATACAGGTAATGAGAGCCCA	+
Preference number: 1 (lower is better) Translates to: TVVPEPDMYFLFQSL*PLSSVDGHTGNESP Trigger: TGGGCTCTCATTACCTGTATGGCCGTCCACAGAGCTCAGTGGCCAGAGGCTTTGAAACAGGAAGTACATGTCAGGTTCAGGAACCACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 90 bp	CCTGAGAAATTTTTAGTTCAGCTCCCACCATGGCAGGTTCAGCGCTaGCATGGACACTGCTCTAGCTCACACCCAGGAAAGCCTTTTCCA	+
Preference number: 1 (lower is better) Translates to: PEKFLVQLPPWQVQR*HGHCSSSHPGKPFP Trigger: TGGAAAAGGCTTTCCTGGGTGTGAGCTAGAGCAGTGTCCATGCCAGCGCTGAACCTGCCATGGTGGGAGCTGAACTAAAAATTTCTCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR TCA 90 bp	ACCCGGACCACACAAAACTTCACCCAAAACAGGAAACCACCAAGCTaGCATGCCTTTGCTTGCAGGGTCCCAAGAAGAAGAGACTTAGAG	+
Preference number: 1 (lower is better) Translates to: TRTTQNFTQNRKPPS*HAFACRVPRRRDLE Trigger: CTCTAAGTCTCTTCTTCTTGGGACCCTGCAAGCAAAGGCATGTCAGCTTGGTGGTTTCCTGTTTTGGGTGAAGTTTTGTGTGGTCCGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR GCA 90 bp	GGATCAATTACCTCCTCAAAATACAGACTTCGCTCTCTAGGCTTTTaGTGGTACCAGGAACCCAATATGGCCCTTGAGGCTACAGGGCTC	+
Preference number: 1 (lower is better) Translates to: GSITSSKYRLRSLGF*WYQEPNMALEATGL Trigger: GAGCCCTGTAGCCTCAAGGGCCATATTGGGTTCCTGGTACCAGCAAAAGCCTAGAGAGCGAAGTCTGTATTTTGAGGAGGTAATTGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 90 bp	ACTGGTCCAGGCCTCACATTGCTCAAGACACTAATGAGCTCACAGTaGTTCCTGAACCTGACATGTACTTCCTGTTTCAAAGCCTCTGGC	+
Preference number: 1 (lower is better) Translates to: TGPGLTLLKTLMSSQ*FLNLTCTSCFKASG Trigger: GCCAGAGGCTTTGAAACAGGAAGTACATGTCAGGTTCAGGAACCACTGTGAGCTCATTAGTGTCTTGAGCAATGTGAGGCCTGGACCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 90 bp	CACCTCCAGGGCCTTAAAGCCAGTGCCTCCAGTCCACTCAGCTGTTaGCAGCCATTGCCACATACTGTTTTTAATAGCATCTCTTTCACA	+
Preference number: 1 (lower is better) Translates to: HLQGLKASASSPLSC*QPLPHTVFNSISFT Trigger: TGTGAAAGAGATGCTATTAAAAACAGTATGTGGCAATGGCTGCCAACAGCTGAGTGGACTGGAGGCACTGGCTTTAAGGCCCTGGAGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 90 bp	TCAATTACCTCCTCAAAATACAGACTTCGCTCTCTAGGCTTTTGCTaGTACCAGGAACCCAATATGGCCCTTGAGGCTACAGGGCTCCTC	+
Preference number: 1 (lower is better) Translates to: SITSSKYRLRSLGFC*YQEPNMALEATGLL Trigger: GAGGAGCCCTGTAGCCTCAAGGGCCATATTGGGTTCCTGGTACCAGCAAAAGCCTAGAGAGCGAAGTCTGTATTTTGAGGAGGTAATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR GCA 90 bp	ACAAAACTTCACCCAAAACAGGAAACCACCAAGCTGACATGCCTTTaGTTGCAGGGTCCCAAGAAGAAGAGACTTAGAGCCCTACAGGAG	+
Preference number: 1 (lower is better) Translates to: TKLHPKQETTKLTCL*LQGPKKKRLRALQE Trigger: CTCCTGTAGGGCTCTAAGTCTCTTCTTCTTGGGACCCTGCAAGCAAAGGCATGTCAGCTTGGTGGTTTCCTGTTTTGGGTGAAGTTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR GCA 90 bp	GCCTTAAAGCCAGTGCCTCCAGTCCACTCAGCTGTTGGCAGCCATTaGCACATACTGTTTTTAATAGCATCTCTTTCACACTTAGAAATG	+
Preference number: 1 (lower is better) Translates to: ALKPVPPVHSAVGSH*HILFLIASLSHLEM Trigger: CATTTCTAAGTGTGAAAGAGATGCTATTAAAAACAGTATGTGGCAATGGCTGCCAACAGCTGAGTGGACTGGAGGCACTGGCTTTAAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR TCA 90 bp	TACACGCAAACATCATATATATACACACAGAAAGGCTTTCAAGACTaGTATGGAGACAGATGTCAAATAAACAAGAACACACGTGGAAAT	+
Preference number: 1 (lower is better) Translates to: YTQTSYIYTQKGFQD*YGDRCQINKNTRGN Trigger: ATTTCCACGTGTGTTCTTGTTTATTTGACATCTGTCTCCATATCAGTCTTGAAAGCCTTTCTGTGTGTATATATATGATGTTTGCGTGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR GCA 90 bp	CTGGGCAGGAAGCGAGTGGTTCTTCTGCTGGGGGCCTCCTCTCCTTTCCACGGAAAGACTCCCCCTGTGTaGCCAGGTCATGCCAAACCC	+
Preference number: 2 (lower is better) Translates to: LGRKRVVLLLGASSPFHGKTPPV*PGHAKP Trigger: GGGTTTGGCATGACCTGGGCACACAGGGGGAGTCTT...TCCGTGGAAAGGAGAGGAGGCCCCCAGCAGAAGAACCACTCGCTTCCTGCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CCA 90 bp	CCCATCTGTCCTCAGGGAATGAATGGGGTTCTCCCTGGCTGCAGGCCCAGAACACCAGAGCCACGAAGCTaGCAGGCCCTCAGGTTGCTG	+
Preference number: 2 (lower is better) Translates to: PICPQGMNGVLPGCRPRTPEPRS*QALRLL Trigger: CAGCAACCTGAGGGCCTGCCAGCTTCGTGGCTCTGG...TGTTCTGGGCCTGCAGCCAGGGAGAACCCCATTCATTCCCTGAGGACAGATGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR TCA 90 bp	CTGGGCAGGAAGCGAGTGGTTCTTCTGCTGGGGGCCTCCTCTCCTTTCCACGGACTGAGTGGTGAGGTCTaGAGCTTAGGGCTGGAGACA	+
Preference number: 2 (lower is better) Translates to: LGRKRVVLLLGASSPFHGLSGEV*SLGLET Trigger: TGTCTCCAGCCCTAAGCTTCAGACCTCACCACTCAG...TCCGTGGAAAGGAGAGGAGGCCCCCAGCAGAAGAACCACTCGCTTCCTGCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR GCA 90 bp	CCTGCTTTATCAGACACCTTTCCTCCTGGTTTCTCCCATCCCAGGCCCAGGGAGGGGGTTCTCCCTGGCTaGAGGCCCAGAACAGGAGCT	+
Preference number: 2 (lower is better) Translates to: PALSDTFPPGFSHPRPREGVLPG*RPRTGA Trigger: AGCTCCTGTTCTGGGCCTGCAGCCAGGGAGAACCCC...CTCCCTGGGCCTGGGATGGGAGAAACCAGGAGGAAAGGTGTCTGATAAAGCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR GCA 90 bp	CCCATCTGTCCTCAGGGAATGAATGGGGTTCTCCCTGGCTGCAGGCCCAGAACAAAGACTCCCCCTGTGTaGCCAGGTCATGCCAAACCC	+
Preference number: 2 (lower is better) Translates to: PICPQGMNGVLPGCRPRTKTPPV*PGHAKP Trigger: GGGTTTGGCATGACCTGGGCACACAGGGGGAGTCTT...TGTTCTGGGCCTGCAGCCAGGGAGAACCCCATTCATTCCCTGAGGACAGATGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CCA 90 bp	CGTAGCCTAGCCGCCTCCTCCAAGTCCTCCGGGGAGCAGTTCTCAAAGAAGGAGGACATATGGTACCACTaGGCTGCTGCTCTCCCAGAC	+
Preference number: 2 (lower is better) Translates to: RSLAASSKSSGEQFSKKEDIWYH*AAALPD Trigger: GTCTGGGAGAGCAGCAGCCCAGTGGTACCATATGTC...CTCCTTCTTTGAGAACTGCTCCCCGGAGGACTTGGAGGAGGCGGCTAGGCTACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CCA 90 bp	CGTAGCCTAGCCGCCTCCTCCAAGTCCTCCGGGGAGCAGTTCTCAAAGAAGGAGCTACCAGTGGCCCTTTaGCTTGTCAAGAAGCCCCTG	+
Preference number: 2 (lower is better) Translates to: RSLAASSKSSGEQFSKKELPVAL*LVKKPL Trigger: CAGGGGCTTCTTGACAAGCCAAAGGGCCACTGGTAG...CTCCTTCTTTGAGAACTGCTCCCCGGAGGACTTGGAGGAGGCGGCTAGGCTACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR TCA 90 bp	TTAGTTCAGCTCCCACCATGGCAGGTTCAGCGCTGGCATGGACACTGCTCTAGCAGTGGTAGTGGTGGATaGCAAGGACAGGAAGGGAGC	+
Preference number: 2 (lower is better) Translates to: LVQLPPWQVQRWHGHCSSSGSGG*QGQEGS Trigger: GCTCCCTTCCTGTCCTTGTCATCCACCACTACCACT...GCTAGAGCAGTGTCCATGCCAGCGCTGAACCTGCCATGGTGGGAGCTGAACTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR TCA 90 bp	TTAGTTCAGCTCCCACCATGGCAGGTTCAGCGCTGGCATGGACACTGCTCTAGCAAGGTCACCCTGAGGTaGGGCTCAGAAGAAGAGTGG	+
Preference number: 2 (lower is better) Translates to: LVQLPPWQVQRWHGHCSSKVTLR*GSEEEW Trigger: CCACTCTTCTTCTGAGCCTCACCTCAGGGTGACCTT...GCTAGAGCAGTGTCCATGCCAGCGCTGAACCTGCCATGGTGGGAGCTGAACTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR GCA 90 bp	ATCTGGGACTGGCACTCAGCTGGGCTGTCTGTGTTTCAAGAGACTTTTGCACTGGGCAGGCCCTCAGGTTaGTGGTGGAAGGCTGCTGAG	+
Preference number: 2 (lower is better) Translates to: IWDWHSAGLSVFQETFALGRPSG*WWKAAE Trigger: CTCAGCAGCCTTCCACCAGCAACCTGAGGGCCTGCC...CAGTGCAAAAGTCTCTTGAAACACAGACAGCCCAGCTGAGTGCCAGTCCCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR GCA 90 bp	CCAAAACAGGAAACCACCAAGCTGACATGCCTTTGCTTGCAGGGTCCCAAGAAGCCCCATACCGGGCCCTaGACCTCCAGGGCCTTAAAG	+
Preference number: 2 (lower is better) Translates to: PKQETTKLTCLCLQGPKKPHTGP*TSRALK Trigger: CTTTAAGGCCCTGGAGGTGCAGGGCCCGGTATGGGG...CTTCTTGGGACCCTGCAAGCAAAGGCATGTCAGCTTGGTGGTTTCCTGTTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR GCA 90 bp	TTAGTTCAGCTCCCACCATGGCAGGTTCAGCGCTGGCATGGACACTGCTCTAGCGCAAGCTCTTCTGTGTaGCTGAAGGTCACCCTGAGG	+
Preference number: 2 (lower is better) Translates to: LVQLPPWQVQRWHGHCSSASSSV*LKVTLR Trigger: CCTCAGGGTGACCTTCAGGCACACAGAAGAGCTTGC...GCTAGAGCAGTGTCCATGCCAGCGCTGAACCTGCCATGGTGGGAGCTGAACTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR GCA 90 bp	CCCATCTGTCCTCAGGGAATGAATGGGGTTCTCCCTGGCTGCAGGCCCAGAACAATGGTACCACTGGGCTaGTGCTCTCCCAGACTTAGA	+
Preference number: 2 (lower is better) Translates to: PICPQGMNGVLPGCRPRTMVPLG*CSPRLR Trigger: TCTAAGTCTGGGAGAGCAGCAGCCCAGTGGTACCAT...TGTTCTGGGCCTGCAGCCAGGGAGAACCCCATTCATTCCCTGAGGACAGATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR GCA 90 bp	TTCTCTGTGATCTGGGACTGGCACTCAGCTGGGCTGTCTGTGTTTCAAGAGACTGGGGTTCTCCCTGGCTaGAGGCCCAGAACAGGAGCT	+
Preference number: 2 (lower is better) Translates to: FSVIWDWHSAGLSVFQETGVLPG*RPRTGA Trigger: AGCTCCTGTTCTGGGCCTGCAGCCAGGGAGAACCCC...AGTCTCTTGAAACACAGACAGCCCAGCTGAGTGCCAGTCCCAGATCACAGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR GCA 90 bp	CCAAAACAGGAAACCACCAAGCTGACATGCCTTTGCTTGCAGGGTCCCAAGAAGACGGAGCTGCAGCCATaGAGGGGTCCCCACAGGCAA	+
Preference number: 2 (lower is better) Translates to: PKQETTKLTCLCLQGPKKTELQP*RGPHRQ Trigger: TTGCCTGTGGGGACCCCTGCATGGCTGCAGCTCCGT...CTTCTTGGGACCCTGCAAGCAAAGGCATGTCAGCTTGGTGGTTTCCTGTTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CCA 90 bp	ATCCTGCAGCTGTCTCTACAGCAGCAGCAAGGTGGTAGCACCCAAGTTCATGGAGAATGGGGTTCTCCCTaGCTGCAGGCCCAGAACAGG	+
Preference number: 2 (lower is better) Translates to: ILQLSLQQQQGGSTQVHGEWGSP*LQAQNR Trigger: CCTGTTCTGGGCCTGCAGCCAGGGAGAACCCCATTC...TCCATGAACTTGGGTGCTACCACCTTGCTGCTGCTGTAGAGACAGCTGCAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CCA 90 bp	TTAGTTCAGCTCCCACCATGGCAGGTTCAGCGCTGGCATGGACACTGCTCTAGCATGGCTTTGATGCCCTaGCCACCCCGACACTCCTAT	+
Preference number: 2 (lower is better) Translates to: LVQLPPWQVQRWHGHCSSMALMP*PPRHSY Trigger: ATAGGAGTGTCGGGGTGGCCAGGGCATCAAAGCCAT...GCTAGAGCAGTGTCCATGCCAGCGCTGAACCTGCCATGGTGGGAGCTGAACTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CCA 90 bp	GCTGCAAGAAGACATATGGTACCACTGGGCTGCTGCTCTCCCAGACTTAGAGCTGAGATGCTCCTCTGGTaGGACATAGGCCAGCCAAGC	+
Preference number: 2 (lower is better) Translates to: AARRHMVPLGCCSPRLRAEMLLW*DIGQPS Trigger: GCTTGGCTGGCCTATGTCCCACCAGAGGAGCATCTC...AGCTCTAAGTCTGGGAGAGCAGCAGCCCAGTGGTACCATATGTCTTCTTGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CCA 90 bp	CTGGGCAGGAAGCGAGTGGTTCTTCTGCTGGGGGCCTCCTCTCCTTTCCACGGACTAATGAGCTCACAGTaGTTCCTGAACCTGACATGT	+
Preference number: 2 (lower is better) Translates to: LGRKRVVLLLGASSPFHGLMSSQ*FLNLTC Trigger: ACATGTCAGGTTCAGGAACCACTGTGAGCTCATTAG...TCCGTGGAAAGGAGAGGAGGCCCCCAGCAGAAGAACCACTCGCTTCCTGCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CAA 90 bp	TGGACCTCATCAGACAACTTGTCTGGGTCCCCAGCAGATAGCTTATaGCTGCTTCCCGGCCTGAAACTCTCTCTTCTCTCCCCACCCATC	+
Preference number: 2 (lower is better) Translates to: WTSSDNLSGSPADSL*LLPGLKLSLLSPPI Trigger: GATGGGTGGGGAGAGAAGAGAGAGTTTCAGGCCGGGAAGCAGCAATAAGCTATCTGCTGGGGACCCAGACAAGTTGTCTGATGAGGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CAA 90 bp	CCCAGGTATAACTGGCATCCCACATCTTGGACCTCATCAGACAACTaGTCTGGGTCCCCAGCAGATAGCTTATTGCTGCTTCCCGGCCTG	+
Preference number: 2 (lower is better) Translates to: PRYNWHPTSWTSSDN*SGSPADSLLLLPGL Trigger: CAGGCCGGGAAGCAGCAATAAGCTATCTGCTGGGGACCCAGACAAGTTGTCTGATGAGGTCCAAGATGTGGGATGCCAGTTATACCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CAA 90 bp	AGCAGGGTCAGCTCGGTCCACAACAGCTACCAGTGGCCCTTTGGCTaGTCAAGAAGCCCCTGCTTTATCAGACACCTTTCCTCCTGGTTT	+
Preference number: 2 (lower is better) Translates to: SRVSSVHNSYQWPFG*SRSPCFIRHLSSWF Trigger: AAACCAGGAGGAAAGGTGTCTGATAAAGCAGGGGCTTCTTGACAAGCCAAAGGGCCACTGGTAGCTGTTGTGGACCGAGCTGACCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CAA 90 bp	ACTTCAGCAGGGTCAGCTCGGTCCACAACAGCTACCAGTGGCCCTTaGGCTTGTCAAGAAGCCCCTGCTTTATCAGACACCTTTCCTCCT	+
Preference number: 2 (lower is better) Translates to: TSAGSARSTTATSGP*ACQEAPALSDTFPP Trigger: AGGAGGAAAGGTGTCTGATAAAGCAGGGGCTTCTTGACAAGCCAAAGGGCCACTGGTAGCTGTTGTGGACCGAGCTGACCCTGCTGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR TCA 90 bp	TTAGTTCAGCTCCCACCATGGCAGGTTCAGCGCTGGCATGGACACTGCTCTAGCAAGTCATCTGAGTGGTaGGGTCTGAAGCTTAGGGCT	+
Preference number: 2 (lower is better) Translates to: LVQLPPWQVQRWHGHCSSKSSEW*GLKLRA Trigger: AGCCCTAAGCTTCAGACCTCACCACTCAGATGACTT...GCTAGAGCAGTGTCCATGCCAGCGCTGAACCTGCCATGGTGGGAGCTGAACTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR GCA 90 bp	TTCTCTGTGATCTGGGACTGGCACTCAGCTGGGCTGTCTGTGTTTCAAGAGACTAGCGAGTGGTTCTTCTaGTGGGGGCCTCCTCTCCTT	+
Preference number: 2 (lower is better) Translates to: FSVIWDWHSAGLSVFQETSEWFF*WGPPLL Trigger: AAGGAGAGGAGGCCCCCAGCAGAAGAACCACTCGCT...AGTCTCTTGAAACACAGACAGCCCAGCTGAGTGCCAGTCCCAGATCACAGAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CCA 90 bp	GTTTCTCCCATCCCAGGCCCAGGGAGAGCTTCATCGGAGATAGGTAGAGACCCTCAGGAGCAAGGAAGCTaGAGTCAGTGCCTAAAAGAC	+
Preference number: 2 (lower is better) Translates to: VSPIPGPGRASSEIGRDPQEQGS*SQCLKD Trigger: GTCTTTTAGGCACTGACTCCAGCTTCCTTGCTCCTG...AGGGTCTCTACCTATCTCCGATGAAGCTCTCCCTGGGCCTGGGATGGGAGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CCA 90 bp	AGCTGTCTCTACAGCAGCAGCAAGGTGGTAGCACCCAAGTTCATGGATGTAGACCCCTCAGGTTGCTGGTaGAAGGCTGCTGAGATGCTC	+
Preference number: 2 (lower is better) Translates to: SCLYSSSKVVAPKFMDVDPSGCW*KAAEML Trigger: GAGCATCTCAGCAGCCTTCCACCAGCAACCTGAGGG...GTCTACATCCATGAACTTGGGTGCTACCACCTTGCTGCTGCTGTAGAGACAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CCA 90 bp	CCTGCTTTATCAGACACCTTTCCTCCTGGTTTCTCCCATCCCAGGCCCAGGGAGCTGCAAGAAGACATATaGTACCACTGGGCTGCTGCT	+
Preference number: 2 (lower is better) Translates to: PALSDTFPPGFSHPRPRELQEDI*YHWAAA Trigger: AGCAGCAGCCCAGTGGTACCATATGTCTTCTTGCAG...CTCCCTGGGCCTGGGATGGGAGAAACCAGGAGGAAAGGTGTCTGATAAAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR TCA 90 bp	GCTGCAAGAAGACATATGGTACCACTGGGCTGCTGCTCTCCCAGACTTAGAGCTGCCAAACCCTGGAGATaGGAGCCAAGAGTAGTATCG	+
Preference number: 2 (lower is better) Translates to: AARRHMVPLGCCSPRLRAAKPWR*EPRVVS Trigger: CGATACTACTCTTGGCTCTCATCTCCAGGGTTTGGC...AGCTCTAAGTCTGGGAGAGCAGCAGCCCAGTGGTACCATATGTCTTCTTGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR GCA 90 bp	ATGCCCAGTTCAGCCCAGCCAGTGGAAGCTGCAAGAAGACATATGGTACCACTGGAGGTCGGTCACCTTTaGCACTGCTCCACACTGAAT	+
Preference number: 2 (lower is better) Translates to: MPSSAQPVEAARRHMVPLEVGHL*HCSTLN Trigger: ATTCAGTGTGGAGCAGTGGCAAAGGTGACCGACCTC...CAGTGGTACCATATGTCTTCTTGCAGCTTCCACTGGCTGGGCTGAACTGGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CCA 90 bp	ATGCCCAGTTCAGCCCAGCCAGTGGAAGCTGCAAGAAGACATATGGTACCACTGTTTCCCTCTAGAGACTaGAGAGTGATCTGCCCAGCC	+
Preference number: 2 (lower is better) Translates to: MPSSAQPVEAARRHMVPLFPSRD*RVICPA Trigger: GGCTGGGCAGATCACTCTCCAGTCTCTAGAGGGAAA...CAGTGGTACCATATGTCTTCTTGCAGCTTCCACTGGCTGGGCTGAACTGGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CCA 90 bp	AGCTGTCTCTACAGCAGCAGCAAGGTGGTAGCACCCAAGTTCATGGATGTAGACGACATATGGTACCACTaGGCTGCTGCTCTCCCAGAC	+
Preference number: 2 (lower is better) Translates to: SCLYSSSKVVAPKFMDVDDIWYH*AAALPD Trigger: GTCTGGGAGAGCAGCAGCCCAGTGGTACCATATGTC...GTCTACATCCATGAACTTGGGTGCTACCACCTTGCTGCTGCTGTAGAGACAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR TCA 90 bp	ATGCCCAGTTCAGCCCAGCCAGTGGAAGCTGCAAGAAGACATATGGTACCACTGAAGTGCACATATCCCTaGCCCAGGTACCATGGTTCA	+
Preference number: 2 (lower is better) Translates to: MPSSAQPVEAARRHMVPLKCTYP*PRYHGS Trigger: TGAACCATGGTACCTGGGTCAGGGATATGTGCACTT...CAGTGGTACCATATGTCTTCTTGCAGCTTCCACTGGCTGGGCTGAACTGGGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR TCA 90 bp	ATCCTGCAGCTGTCTCTACAGCAGCAGCAAGGTGGTAGCACCCAAGTTCATGGAAAGTGCACATATCCCTaGCCCAGGTACCATGGTTCA	+
Preference number: 2 (lower is better) Translates to: ILQLSLQQQQGGSTQVHGKCTYP*PRYHGS Trigger: TGAACCATGGTACCTGGGTCAGGGATATGTGCACTT...TCCATGAACTTGGGTGCTACCACCTTGCTGCTGCTGTAGAGACAGCTGCAGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR TCA 90 bp	AGCTGTCTCTACAGCAGCAGCAAGGTGGTAGCACCCAAGTTCATGGATGTAGACAGGATGCAGGTCATCTaGCATCTGTGGCTGTCGAAG	+
Preference number: 2 (lower is better) Translates to: SCLYSSSKVVAPKFMDVDRMQVI*HLWLSK Trigger: CTTCGACAGCCACAGATGTCAGATGACCTGCATCCT...GTCTACATCCATGAACTTGGGTGCTACCACCTTGCTGCTGCTGTAGAGACAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR TCA 90 bp	CCAAAACAGGAAACCACCAAGCTGACATGCCTTTGCTTGCAGGGTCCCAAGAAGGCCAAACCCTGGAGATaGGAGCCAAGAGTAGTATCG	+
Preference number: 2 (lower is better) Translates to: PKQETTKLTCLCLQGPKKAKPWR*EPRVVS Trigger: CGATACTACTCTTGGCTCTCATCTCCAGGGTTTGGC...CTTCTTGGGACCCTGCAAGCAAAGGCATGTCAGCTTGGTGGTTTCCTGTTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR GCA 90 bp	ATCTGGGACTGGCACTCAGCTGGGCTGTCTGTGTTTCAAGAGACTTTTGCACTGGAGGTCGGTCACCTTTaGCACTGCTCCACACTGAAT	+
Preference number: 2 (lower is better) Translates to: IWDWHSAGLSVFQETFALEVGHL*HCSTLN Trigger: ATTCAGTGTGGAGCAGTGGCAAAGGTGACCGACCTC...CAGTGCAAAAGTCTCTTGAAACACAGACAGCCCAGCTGAGTGCCAGTCCCAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR GCA 90 bp	CCAAAACAGGAAACCACCAAGCTGACATGCCTTTGCTTGCAGGGTCCCAAGAAGTGTGTGCCCAGGTCATaGCAAACCCTGGAGATGAGA	+
Preference number: 2 (lower is better) Translates to: PKQETTKLTCLCLQGPKKCVPRS*QTLEMR Trigger: TCTCATCTCCAGGGTTTGGCATGACCTGGGCACACA...CTTCTTGGGACCCTGCAAGCAAAGGCATGTCAGCTTGGTGGTTTCCTGTTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR GCA 90 bp	CCAAAACAGGAAACCACCAAGCTGACATGCCTTTGCTTGCAGGGTCCCAAGAAGCCAGCCAGTGGAAGCTaGAAGAAGACATATGGTACC	+
Preference number: 2 (lower is better) Translates to: PKQETTKLTCLCLQGPKKPASGS*KKTYGT Trigger: GGTACCATATGTCTTCTTGCAGCTTCCACTGGCTGG...CTTCTTGGGACCCTGCAAGCAAAGGCATGTCAGCTTGGTGGTTTCCTGTTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CCA 90 bp	ATCCTTAGCAGAATTCCTCTCACCATATTTTCCAGGAAGCCACACCCAACAGATGAGATGCTCCTCTGGTaGGACATAGGCCAGCCAAGC	+
Preference number: 2 (lower is better) Translates to: ILSRIPLTIFSRKPHPTDEMLLW*DIGQPS Trigger: GCTTGGCTGGCCTATGTCCCACCAGAGGAGCATCTC...ATCTGTTGGGTGTGGCTTCCTGGAAAATATGGTGAGAGGAATTCTGCTAAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR TCA 90 bp	ATCCTTAGCAGAATTCCTCTCACCATATTTTCCAGGAAGCCACACCCAACAGATCTGAGTGGTGAGGTCTaGAGCTTAGGGCTGGAGACA	+
Preference number: 2 (lower is better) Translates to: ILSRIPLTIFSRKPHPTDLSGEV*SLGLET Trigger: TGTCTCCAGCCCTAAGCTTCAGACCTCACCACTCAG...ATCTGTTGGGTGTGGCTTCCTGGAAAATATGGTGAGAGGAATTCTGCTAAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR TCA 90 bp	ATCCTTAGCAGAATTCCTCTCACCATATTTTCCAGGAAGCCACACCCAACAGATGAGCCGTATTCTCTGTaGTCTGGGACTGGCACTCAG	+
Preference number: 2 (lower is better) Translates to: ILSRIPLTIFSRKPHPTDEPYSL*SGTGTQ Trigger: CTGAGTGCCAGTCCCAGATCACAGAGAATACGGCTC...ATCTGTTGGGTGTGGCTTCCTGGAAAATATGGTGAGAGGAATTCTGCTAAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CCA 90 bp	ATCTGGGACTGGCACTCAGCTGGGCTGTCTGTGTTTCAAGAGACTTTTGCACTGCTAATGAGCTCACAGTaGTTCCTGAACCTGACATGT	+
Preference number: 2 (lower is better) Translates to: IWDWHSAGLSVFQETFALLMSSQ*FLNLTC Trigger: ACATGTCAGGTTCAGGAACCACTGTGAGCTCATTAG...CAGTGCAAAAGTCTCTTGAAACACAGACAGCCCAGCTGAGTGCCAGTCCCAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CCA 90 bp	ATCCTGCAGCTGTCTCTACAGCAGCAGCAAGGTGGTAGCACCCAAGTTCATGGAATAGATCTAGAGCAATaGATGGTGCAGAAGAGTGGA	+
Preference number: 2 (lower is better) Translates to: ILQLSLQQQQGGSTQVHGIDLEQ*MVQKSG Trigger: TCCACTCTTCTGCACCATCCATTGCTCTAGATCTAT...TCCATGAACTTGGGTGCTACCACCTTGCTGCTGCTGTAGAGACAGCTGCAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR TCA 90 bp	GGGAGAACTCAGCATCCCAAGATCTTGAGAACAGCAATGAGCAATCCAACATCTAAGTGCACATATCCCTaGCCCAGGTACCATGGTTCA	+
Preference number: 2 (lower is better) Translates to: GRTQHPKILRTAMSNPTSKCTYP*PRYHGS Trigger: TGAACCATGGTACCTGGGTCAGGGATATGTGCACTT...AGATGTTGGATTGCTCATTGCTGTTCTCAAGATCTTGGGATGCTGAGTTCTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
3UTR-3UTR TCA 90 bp	GAAAGGCTTTCAAGACTGATATGGAGACAGATGTCAAATAAACAAGAACACACGGCCACACCCCCACAGTaGGCAGGAGTCTCTCACATC	+
Preference number: 2 (lower is better) Translates to: ERLSRLIWRQMSNKQEHTATPPQ*AGVSHI Trigger: GATGTGAGAGACTCCTGCTCACTGTGGGGGTGTGGC...CGTGTGTTCTTGTTTATTTGACATCTGTCTCCATATCAGTCTTGAAAGCCTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR TCA 90 bp	GGCATGTACGTGACACCTATGCATGTATTCAGGCAAAACATTCATATAGTAAATGCCACACCCCCACAGTaGGCAGGAGTCTCTCACATC	+
Preference number: 2 (lower is better) Translates to: GMYVTPMHVFRQNIHIVNATPPQ*AGVSHI Trigger: GATGTGAGAGACTCCTGCTCACTGTGGGGGTGTGGC...ATTTACTATATGAATGTTTTGCCTGAATACATGCATAGGTGTCACGTACATGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR TCA 90 bp	GAAAGGCTTTCAAGACTGATATGGAGACAGATGTCAAATAAACAAGAACACACGTCTGTCCTCAGGGAATaGATGGGGTTCTCCCTGGCT	+
Preference number: 2 (lower is better) Translates to: ERLSRLIWRQMSNKQEHTSVLRE*MGFSLA Trigger: AGCCAGGGAGAACCCCATTCATTCCCTGAGGACAGA...CGTGTGTTCTTGTTTATTTGACATCTGTCTCCATATCAGTCTTGAAAGCCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR TCA 90 bp	GGCATGTACGTGACACCTATGCATGTATTCAGGCAAAACATTCATATAGTAAATAGTGGTAGTGGTGGATaGCAAGGACAGGAAGGGAGC	+
Preference number: 2 (lower is better) Translates to: GMYVTPMHVFRQNIHIVNSGSGG*QGQEGS Trigger: GCTCCCTTCCTGTCCTTGTCATCCACCACTACCACT...ATTTACTATATGAATGTTTTGCCTGAATACATGCATAGGTGTCACGTACATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR GCA 90 bp	GAAAGGCTTTCAAGACTGATATGGAGACAGATGTCAAATAAACAAGAACACACGATGGTACCACTGGGCTaGTGCTCTCCCAGACTTAGA	+
Preference number: 2 (lower is better) Translates to: ERLSRLIWRQMSNKQEHTMVPLG*CSPRLR Trigger: TCTAAGTCTGGGAGAGCAGCAGCCCAGTGGTACCAT...CGTGTGTTCTTGTTTATTTGACATCTGTCTCCATATCAGTCTTGAAAGCCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR TCA 90 bp	GGCATGTACGTGACACCTATGCATGTATTCAGGCAAAACATTCATATAGTAAATGGCTACTGGTTTCCATaGAGAAAGGCTCTTGCCAAG	+
Preference number: 2 (lower is better) Translates to: GMYVTPMHVFRQNIHIVNGYWFP*RKALAK Trigger: CTTGGCAAGAGCCTTTCTTCATGGAAACCAGTAGCC...ATTTACTATATGAATGTTTTGCCTGAATACATGCATAGGTGTCACGTACATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR GCA 90 bp	GAAAGGCTTTCAAGACTGATATGGAGACAGATGTCAAATAAACAAGAACACACGCGGACGTTCATAGGATaGAGGTCATCTGACATCTGT	+
Preference number: 2 (lower is better) Translates to: ERLSRLIWRQMSNKQEHTRTFIG*RSSDIC Trigger: ACAGATGTCAGATGACCTGCATCCTATGAACGTCCG...CGTGTGTTCTTGTTTATTTGACATCTGTCTCCATATCAGTCTTGAAAGCCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 72 bp	GCCCAGAGCCACGAAGCTGGCAGGCCCTCAGGTTGCTaGTGGAAGGCTGCTGAGATGCTCCTCTGGTGGGAC	+
Preference number: 3 (lower is better) Translates to: AQSHEAGRPSGC*WKAAEMLLWWD Trigger: GTCCCACCAGAGGAGCATCTCAGCAGCCTTCCACCAGCAACCTGAGGGCCTGCCAGCTTCGTGGCTCTGGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR GCA 72 bp	AGAGCCCAGAGCCACGAAGCTGGCAGGCCCTCAGGTTaGTGGTGGAAGGCTGCTGAGATGCTCCTCTGGTGG	+
Preference number: 3 (lower is better) Translates to: RAQSHEAGRPSG*WWKAAEMLLWW Trigger: CCACCAGAGGAGCATCTCAGCAGCCTTCCACCAGCAACCTGAGGGCCTGCCAGCTTCGTGGCTCTGGGCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 72 bp	GGAGGAAGCTGGGCAGGAAGCGAGTGGTTCTTCTGCTaGGGGCCTCCTCTCCTTTCCACGGAGCTGCAGCCA	+
Preference number: 3 (lower is better) Translates to: GGSWAGSEWFFC*GPPLLSTELQP Trigger: TGGCTGCAGCTCCGTGGAAAGGAGAGGAGGCCCCCAGCAGAAGAACCACTCGCTTCCTGCCCAGCTTCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR GCA 72 bp	ACAGGAGGAAGCTGGGCAGGAAGCGAGTGGTTCTTCTaGTGGGGGCCTCCTCTCCTTTCCACGGAGCTGCAG	+
Preference number: 3 (lower is better) Translates to: TGGSWAGSEWFF*WGPPLLSTELQ Trigger: CTGCAGCTCCGTGGAAAGGAGAGGAGGCCCCCAGCAGAAGAACCACTCGCTTCCTGCCCAGCTTCCTCCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CAA 90 bp	TTAGTTCAGCTCCCACCATGGCAGGTTCAGCGCTGGCATGGACACTGCTCTAGCACAGGGGTCATGGCTTaGATGCCCTGGCCACCCCGA	+
Preference number: 3 (lower is better) Translates to: LVQLPPWQVQRWHGHCSSTGVMA*MPWPPR Trigger: TCGGGGTGGCCAGGGCATCAAAGCCATGACCCCTGT...GCTAGAGCAGTGTCCATGCCAGCGCTGAACCTGCCATGGTGGGAGCTGAACTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CAA 90 bp	CGTAGCCTAGCCGCCTCCTCCAAGTCCTCCGGGGAGCAGTTCTCAAAGAAGGAGAACCCAATATGGCCCTaGAGGCTACAGGGCTCCTCC	+
Preference number: 3 (lower is better) Translates to: RSLAASSKSSGEQFSKKENPIWP*RLQGSS Trigger: GGAGGAGCCCTGTAGCCTCAAGGGCCATATTGGGTT...CTCCTTCTTTGAGAACTGCTCCCCGGAGGACTTGGAGGAGGCGGCTAGGCTACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR TCA 72 bp	CCCCCTGTGTGCCCAGGTCATGCCAAACCCTGGAGATaGGAGCCAAGAGTAGTATCGGACCAGGGGCAAGCT	+
Preference number: 3 (lower is better) Translates to: PPVCPGHAKPWR*EPRVVSDQGQA Trigger: AGCTTGCCCCTGGTCCGATACTACTCTTGGCTCTCATCTCCAGGGTTTGGCATGACCTGGGCACACAGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR GCA 72 bp	CTGGCTGCAGGCCCAGAACAGGAGCTTTCCTACCCATaGCCAGTTCAGCCCAGCCAGTGGAAGCTGCAAGAA	+
Preference number: 3 (lower is better) Translates to: LAAGPEQELSYP*PVQPSQWKLQE Trigger: TTCTTGCAGCTTCCACTGGCTGGGCTGAACTGGGCATGGGTAGGAAAGCTCCTGTTCTGGGCCTGCAGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 72 bp	TCTTCTCTCCCCACCCATCTGTCCTCAGGGAATGAATaGGGTTCTCCCTGGCTGCAGGCCCAGAACAGGAGC	+
Preference number: 3 (lower is better) Translates to: SSLPTHLSSGNE*GSPWLQAQNRS Trigger: GCTCCTGTTCTGGGCCTGCAGCCAGGGAGAACCCCATTCATTCCCTGAGGACAGATGGGTGGGGAGAGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CAA 90 bp	CTGGGCAGGAAGCGAGTGGTTCTTCTGCTGGGGGCCTCCTCTCCTTTCCACGGACCAGCAGATAGCTTATaGCTGCTTCCCGGCCTGAAA	+
Preference number: 3 (lower is better) Translates to: LGRKRVVLLLGASSPFHGPADSL*LLPGLK Trigger: TTTCAGGCCGGGAAGCAGCAATAAGCTATCTGCTGG...TCCGTGGAAAGGAGAGGAGGCCCCCAGCAGAAGAACCACTCGCTTCCTGCCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CAA 90 bp	GTTTCTCCCATCCCAGGCCCAGGGAGAGCTTCATCGGAGATAGGTAGAGACCCTGGAGGTCGGTCACCTTaGCCACTGCTCCACACTGAA	+
Preference number: 3 (lower is better) Translates to: VSPIPGPGRASSEIGRDPGGRSP*PLLHTE Trigger: TTCAGTGTGGAGCAGTGGCAAAGGTGACCGACCTCC...AGGGTCTCTACCTATCTCCGATGAAGCTCTCCCTGGGCCTGGGATGGGAGAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR GCA 72 bp	CCTACCCATGCCCAGTTCAGCCCAGCCAGTGGAAGCTaGAAGAAGACATATGGTACCACTGGGCTGCTGCTC	+
Preference number: 3 (lower is better) Translates to: PTHAQFSPASGS*KKTYGTTGLLL Trigger: GAGCAGCAGCCCAGTGGTACCATATGTCTTCTTGCAGCTTCCACTGGCTGGGCTGAACTGGGCATGGGTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR GCA 72 bp	ATCTGTCCTCAGGGAATGAATGGGGTTCTCCCTGGCTaGAGGCCCAGAACAGGAGCTTTCCTACCCATGCCC	+
Preference number: 3 (lower is better) Translates to: ICPQGMNGVLPG*RPRTGAFLPMP Trigger: GGGCATGGGTAGGAAAGCTCCTGTTCTGGGCCTGCAGCCAGGGAGAACCCCATTCATTCCCTGAGGACAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 72 bp	TCAGGTTGCTGGTGGAAGGCTGCTGAGATGCTCCTCTaGTGGGACATAGGCCAGCCAAGCTCCAGAATCCAG	+
Preference number: 3 (lower is better) Translates to: SGCWWKAAEMLL*WDIGQPSSRIQ Trigger: CTGGATTCTGGAGCTTGGCTGGCCTATGTCCCACCAGAGGAGCATCTCAGCAGCCTTCCACCAGCAACCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR TCA 72 bp	GTGCCTACCTCATCCCCTCCGGGCTACTGGTTTCCATaGAGAAAGGCTCTTGCCAAGCCGGACGTTCATAGG	+
Preference number: 3 (lower is better) Translates to: VPTSSPPGYWFP*RKALAKPDVHR Trigger: CCTATGAACGTCCGGCTTGGCAAGAGCCTTTCTTCATGGAAACCAGTAGCCCGGAGGGGATGAGGTAGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 72 bp	ACCCATCTGTCCTCAGGGAATGAATGGGGTTCTCCCTaGCTGCAGGCCCAGAACAGGAGCTTTCCTACCCAT	+
Preference number: 3 (lower is better) Translates to: THLSSGNEWGSP*LQAQNRSFPTH Trigger: ATGGGTAGGAAAGCTCCTGTTCTGGGCCTGCAGCCAGGGAGAACCCCATTCATTCCCTGAGGACAGATGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 72 bp	TCTTTGACTGGCCTCACAGCCCTGCCACTGAACAGCTaGCAGTTCGCCAGGCCATTATCCCCAAAGCCAAAC	+
Preference number: 3 (lower is better) Translates to: SLTGLTALPLNS*QFARPLSPKPN Trigger: GTTTGGCTTTGGGGATAATGGCCTGGCGAACTGCCAGCTGTTCAGTGGCAGGGCTGTGAGGCCAGTCAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 72 bp	CAGGGGACAGGCTATACTCATCGTTCAGCTGGTCTGTaGGTTCTAGTCTTTGACTGGCCTCACAGCCCTGCC	+
Preference number: 3 (lower is better) Translates to: QGTGYTHRSAGL*VLVFDWPHSPA Trigger: GGCAGGGCTGTGAGGCCAGTCAAAGACTAGAACCCACAGACCAGCTGAACGATGAGTATAGCCTGTCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CAA 90 bp	TTAGTTCAGCTCCCACCATGGCAGGTTCAGCGCTGGCATGGACACTGCTCTAGCCAAGCTGACATGCCTTaGCTTGCAGGGTCCCAAGAA	+
Preference number: 3 (lower is better) Translates to: LVQLPPWQVQRWHGHCSSQADMP*LAGSQE Trigger: TTCTTGGGACCCTGCAAGCAAAGGCATGTCAGCTTG...GCTAGAGCAGTGTCCATGCCAGCGCTGAACCTGCCATGGTGGGAGCTGAACTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 72 bp	GTTCAGCCCAGCCAGTGGAAGCTGCAAGAAGACATATaGTACCACTGGGCTGCTGCTCTCCCAGACTTAGAG	+
Preference number: 3 (lower is better) Translates to: VQPSQWKLQEDI*YHWAAALPDLE Trigger: CTCTAAGTCTGGGAGAGCAGCAGCCCAGTGGTACCATATGTCTTCTTGCAGCTTCCACTGGCTGGGCTGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CAA 90 bp	AGCTGTCTCTACAGCAGCAGCAAGGTGGTAGCACCCAAGTTCATGGATGTAGACGGAGGTCGGTCACCTTaGCCACTGCTCCACACTGAA	+
Preference number: 3 (lower is better) Translates to: SCLYSSSKVVAPKFMDVDGGRSP*PLLHTE Trigger: TTCAGTGTGGAGCAGTGGCAAAGGTGACCGACCTCC...GTCTACATCCATGAACTTGGGTGCTACCACCTTGCTGCTGCTGTAGAGACAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CAA 90 bp	ATCTGGGACTGGCACTCAGCTGGGCTGTCTGTGTTTCAAGAGACTTTTGCACTGGCTACCAGTGGCCCTTaGGCTTGTCAAGAAGCCCCT	+
Preference number: 3 (lower is better) Translates to: IWDWHSAGLSVFQETFALATSGP*ACQEAP Trigger: AGGGGCTTCTTGACAAGCCAAAGGGCCACTGGTAGC...CAGTGCAAAAGTCTCTTGAAACACAGACAGCCCAGCTGAGTGCCAGTCCCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR TCA 72 bp	TGCCACTGCTCCACACTGAATAGTGGTAGTGGTGGATaGCAAGGACAGGAAGGGAGCGTGTTCCCCTCATCA	+
Preference number: 3 (lower is better) Translates to: CHCSTLNSGSGG*QGQEGSVFPSS Trigger: TGATGAGGGGAACACGCTCCCTTCCTGTCCTTGTCATCCACCACTACCACTATTCAGTGTGGAGCAGTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR TCA 72 bp	CATGCAGAACATGAGCCAGATGAGCCGTATTCTCTGTaGTCTGGGACTGGCACTCAGCTGGGCTGTCTGTGT	+
Preference number: 3 (lower is better) Translates to: HAEHEPDEPYSL*SGTGTQLGCLC Trigger: ACACAGACAGCCCAGCTGAGTGCCAGTCCCAGATCACAGAGAATACGGCTCATCTGGCTCATGTTCTGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR TCA 72 bp	CTGACATGTACTTCCTGTTTCAAAGCCTCTGGCCACTaGGCTCTGTGGACGGCCATACAGGTAATGAGAGCC	+
Preference number: 3 (lower is better) Translates to: LTCTSCFKASGH*ALWTAIQVMRA Trigger: GGCTCTCATTACCTGTATGGCCGTCCACAGAGCTCAGTGGCCAGAGGCTTTGAAACAGGAAGTACATGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR TCA 72 bp	AGGCAAATTCTTAGAAGTCATCTGAGTGGTGAGGTCTaGAGCTTAGGGCTGGAGACAGGTCAGGCTCCCCCA	+
Preference number: 3 (lower is better) Translates to: RQILRSHLSGEV*SLGLETGQAPP Trigger: TGGGGGAGCCTGACCTGTCTCCAGCCCTAAGCTTCAGACCTCACCACTCAGATGACTTCTAAGAATTTGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR GCA 72 bp	ATCCTTTCTGAAGACTCCCCCTGTGTGCCCAGGTCATaGCAAACCCTGGAGATGAGAGCCAAGAGTAGTATC	+
Preference number: 3 (lower is better) Translates to: ILSEDSPCVPRS*QTLEMRAKSSI Trigger: GATACTACTCTTGGCTCTCATCTCCAGGGTTTGGCATGACCTGGGCACACAGGGGGAGTCTTCAGAAAGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR GCA 72 bp	GCCCAGCCGTATCCCTCCTCACTCTCAAACATCAGCTaGCCATCCCTACCTCACAAGAACTACCCTTTCTTT	+
Preference number: 3 (lower is better) Translates to: AQPYPSSLSNIS*PSLPHKNYPFF Trigger: AAAGAAAGGGTAGTTCTTGTGAGGTAGGGATGGGCAGCTGATGTTTGAGAGTGAGGAGGGATACGGCTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR GCA 72 bp	AGCTACCAGTGGCCCTTTGGCTTGTCAAGAAGCCCCTaGTTTATCAGACACCTTTCCTCCTGGTTTCTCCCA	+
Preference number: 3 (lower is better) Translates to: SYQWPFGLSRSP*FIRHLSSWFLP Trigger: TGGGAGAAACCAGGAGGAAAGGTGTCTGATAAAGCAGGGGCTTCTTGACAAGCCAAAGGGCCACTGGTAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 72 bp	AGCCAGTGGAAGCTGCAAGAAGACATATGGTACCACTaGGCTGCTGCTCTCCCAGACTTAGAGCTACTTTCC	+
Preference number: 3 (lower is better) Translates to: SQWKLQEDIWYH*AAALPDLELLS Trigger: GGAAAGTAGCTCTAAGTCTGGGAGAGCAGCAGCCCAGTGGTACCATATGTCTTCTTGCAGCTTCCACTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 72 bp	AGCCGTATTCTCTGTGATCTGGGACTGGCACTCAGCTaGGCTGTCTGTGTTTCAAGAGACTTTTGCACTGCC	+
Preference number: 3 (lower is better) Translates to: SRILCDLGLALS*AVCVSRDFCTA Trigger: GGCAGTGCAAAAGTCTCTTGAAACACAGACAGCCCAGCTGAGTGCCAGTCCCAGATCACAGAGAATACGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CAA 90 bp	AGCTGTCTCTACAGCAGCAGCAAGGTGGTAGCACCCAAGTTCATGGATGTAGACACCTCATCAGACAACTaGTCTGGGTCCCCAGCAGAT	+
Preference number: 3 (lower is better) Translates to: SCLYSSSKVVAPKFMDVDTSSDN*SGSPAD Trigger: ATCTGCTGGGGACCCAGACAAGTTGTCTGATGAGGT...GTCTACATCCATGAACTTGGGTGCTACCACCTTGCTGCTGCTGTAGAGACAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR GCA 72 bp	GTGGAAGCTGCAAGAAGACATATGGTACCACTGGGCTaGTGCTCTCCCAGACTTAGAGCTACTTTCCCTCTA	+
Preference number: 3 (lower is better) Translates to: VEAARRHMVPLG*CSPRLRATFPL Trigger: TAGAGGGAAAGTAGCTCTAAGTCTGGGAGAGCAGCAGCCCAGTGGTACCATATGTCTTCTTGCAGCTTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR GCA 72 bp	CACCCAAAACAGGAAACCACCAAGCTGACATGCCTTTaGTTGCAGGGTCCCAAGAAGAAGAGACTTAGAGCC	+
Preference number: 3 (lower is better) Translates to: HPKQETTKLTCL*LQGPKKKRLRA Trigger: GGCTCTAAGTCTCTTCTTCTTGGGACCCTGCAAGCAAAGGCATGTCAGCTTGGTGGTTTCCTGTTTTGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 72 bp	CCTGAACCTGACATGTACTTCCTGTTTCAAAGCCTCTaGCCACTGAGCTCTGTGGACGGCCATACAGGTAAT	+
Preference number: 3 (lower is better) Translates to: PEPDMYFLFQSL*PLSSVDGHTGN Trigger: ATTACCTGTATGGCCGTCCACAGAGCTCAGTGGCCAGAGGCTTTGAAACAGGAAGTACATGTCAGGTTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 72 bp	ACAAAGCTAGATCCCCAGAGTGGAATCCTGAGGTCCTaGTTCAAGCCAGTTACCCAAGGACTCTGTCAGCTA	+
Preference number: 3 (lower is better) Translates to: TKLDPQSGILRS*FKPVTQGLCQL Trigger: TAGCTGACAGAGTCCTTGGGTAACTGGCTTGAACCAGGACCTCAGGATTCCACTCTGGGGATCTAGCTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR CCA 72 bp	GGCCTTAAAGCCAGTGCCTCCAGTCCACTCAGCTGTTaGCAGCCATTGCCACATACTGTTTTTAATAGCATC	+
Preference number: 3 (lower is better) Translates to: GLKASASSPLSC*QPLPHTVFNSI Trigger: GATGCTATTAAAAACAGTATGTGGCAATGGCTGCCAACAGCTGAGTGGACTGGAGGCACTGGCTTTAAGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CAA 90 bp	GGCATGTACGTGACACCTATGCATGTATTCAGGCAAAACATTCATATAGTAAATACAGGGGTCATGGCTTaGATGCCCTGGCCACCCCGA	+
Preference number: 3 (lower is better) Translates to: GMYVTPMHVFRQNIHIVNTGVMA*MPWPPR Trigger: TCGGGGTGGCCAGGGCATCAAAGCCATGACCCCTGT...ATTTACTATATGAATGTTTTGCCTGAATACATGCATAGGTGTCACGTACATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CAA 90 bp	ATCCTTAGCAGAATTCCTCTCACCATATTTTCCAGGAAGCCACACCCAACAGATCAAGCTGACATGCCTTaGCTTGCAGGGTCCCAAGAA	+
Preference number: 3 (lower is better) Translates to: ILSRIPLTIFSRKPHPTDQADMP*LAGSQE Trigger: TTCTTGGGACCCTGCAAGCAAAGGCATGTCAGCTTG...ATCTGTTGGGTGTGGCTTCCTGGAAAATATGGTGAGAGGAATTCTGCTAAGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CAA 90 bp	GGCATGTACGTGACACCTATGCATGTATTCAGGCAAAACATTCATATAGTAAATGGCTCCTCCCTCCTCTaGGGGAACTCAGTTCCCCAC	+
Preference number: 3 (lower is better) Translates to: GMYVTPMHVFRQNIHIVNGSSLL*GNSVPH Trigger: GTGGGGAACTGAGTTCCCCAAGAGGAGGGAGGAGCC...ATTTACTATATGAATGTTTTGCCTGAATACATGCATAGGTGTCACGTACATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CAA 90 bp	GAAAGGCTTTCAAGACTGATATGGAGACAGATGTCAAATAAACAAGAACACACGGGAGTCTCTCACATCTaGTGTCTCTCTCCCGGGAGG	+
Preference number: 3 (lower is better) Translates to: ERLSRLIWRQMSNKQEHTGVSHI*CLSPGR Trigger: CCTCCCGGGAGAGAGACACAAGATGTGAGAGACTCC...CGTGTGTTCTTGTTTATTTGACATCTGTCTCCATATCAGTCTTGAAAGCCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR TCA 72 bp	ACACAAAACTTCACCCAAAACAGGAAACCACCAAGCTaGCATGCCTTTGCTTGCAGGGTCCCAAGAAGAAGA	+
Preference number: 3 (lower is better) Translates to: TQNFTQNRKPPS*HAFACRVPRRR Trigger: TCTTCTTCTTGGGACCCTGCAAGCAAAGGCATGTCAGCTTGGTGGTTTCCTGTTTTGGGTGAAGTTTTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CAA 90 bp	GGCATGTACGTGACACCTATGCATGTATTCAGGCAAAACATTCATATAGTAAATGGTCCAGGCCTCACATaGCTCAAGACACTAATGAGC	+
Preference number: 3 (lower is better) Translates to: GMYVTPMHVFRQNIHIVNGPGLT*LKTLMS Trigger: GCTCATTAGTGTCTTGAGCAATGTGAGGCCTGGACC...ATTTACTATATGAATGTTTTGCCTGAATACATGCATAGGTGTCACGTACATGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR-3UTR CAA 90 bp	GGCATGTACGTGACACCTATGCATGTATTCAGGCAAAACATTCATATAGTAAATTGTTTCAAGAGACTTTaGCACTGCCCTCCCTTCCCC	+
Preference number: 3 (lower is better) Translates to: GMYVTPMHVFRQNIHIVNCFKRL*HCPPFP Trigger: GGGGAAGGGAGGGCAGTGCAAAAGTCTCTTGAAACA...ATTTACTATATGAATGTTTTGCCTGAATACATGCATAGGTGTCACGTACATGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
3UTR GCA 72 bp	AAGCCAAACAGAACAACACATTCTGTCTATAGTAACTaGATAGATCTAGAGCAATGGATGGTGCAGAAGAGT	+
Preference number: 3 (lower is better) Translates to: KPNRTTHSVYSN*IDLEQWMVQKS Trigger: ACTCTTCTGCACCATCCATTGCTCTAGATCTATGCAGTTACTATAGACAGAATGTGTTGTTCTGTTTGGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR GCA 90 bp	TTAGTTCAGCTCCCACCATGGCAGGTTCAGCGCTGGCATGGACACTGCTCTAGCTTCCCCAGCGCGGGCTaGTGGCCTCTGGGACCGCGG	+
Preference number: 4 (lower is better) Translates to: LVQLPPWQVQRWHGHCSSFPSAG*WPLGPR Trigger: CCGCGGTCCCAGAGGCCAGCAGCCCGCGCTGGGGAA...GCTAGAGCAGTGTCCATGCCAGCGCTGAACCTGCCATGGTGGGAGCTGAACTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR CCA 90 bp	CGTAGCCTAGCCGCCTCCTCCAAGTCCTCCGGGGAGCAGTTCTCAAAGAAGGAGGCCTCAGGCATCCCCTaGAAGGGTGGAGTGGTCTCG	+
Preference number: 4 (lower is better) Translates to: RSLAASSKSSGEQFSKKEASGIP*KGGVVS Trigger: CGAGACCACTCCACCCTTCCAGGGGATGCCTGAGGC...CTCCTTCTTTGAGAACTGCTCCCCGGAGGACTTGGAGGAGGCGGCTAGGCTACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR CCA 90 bp	CCCATCTGTCCTCAGGGAATGAATGGGGTTCTCCCTGGCTGCAGGCCCAGAACAGACGTCCCCAGGGCCTaGAGGCGACAGAGGTGTGCT	+
Preference number: 4 (lower is better) Translates to: PICPQGMNGVLPGCRPRTDVPRA*RRQRCA Trigger: AGCACACCTCTGTCGCCTCCAGGCCCTGGGGACGTC...TGTTCTGGGCCTGCAGCCAGGGAGAACCCCATTCATTCCCTGAGGACAGATGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR TCA 90 bp	GCTGCAAGAAGACATATGGTACCACTGGGCTGCTGCTCTCCCAGACTTAGAGCTCCAGGGCCGCAGCCGTaGTGCTGTCACTGTCCTGCT	+
Preference number: 4 (lower is better) Translates to: AARRHMVPLGCCSPRLRAPGPQP*CCHCPA Trigger: AGCAGGACAGTGACAGCATCACGGCTGCGGCCCTGG...AGCTCTAAGTCTGGGAGAGCAGCAGCCCAGTGGTACCATATGTCTTCTTGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR GCA 90 bp	TTAGTTCAGCTCCCACCATGGCAGGTTCAGCGCTGGCATGGACACTGCTCTAGCGAGGCGACAGAGGTGTaGTGGGGTCAGAGAGCAGGT	+
Preference number: 4 (lower is better) Translates to: LVQLPPWQVQRWHGHCSSEATEV*WGQRAG Trigger: ACCTGCTCTCTGACCCCAGCACACCTCTGTCGCCTC...GCTAGAGCAGTGTCCATGCCAGCGCTGAACCTGCCATGGTGGGAGCTGAACTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR CCA 90 bp	GAGCAAGGAAGCTGGAGTCAGTGCCTAAAAGACTGTCCAAGGGCCAGCCATAGAGACGTCCCCAGGGCCTaGAGGCGACAGAGGTGTGCT	+
Preference number: 4 (lower is better) Translates to: EQGSWSQCLKDCPRASHRDVPRA*RRQRCA Trigger: AGCACACCTCTGTCGCCTCCAGGCCCTGGGGACGTC...TCTATGGCTGGCCCTTGGACAGTCTTTTAGGCACTGACTCCAGCTTCCTTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS-3UTR CCA 90 bp	ATCCTGCAGCTGTCTCTACAGCAGCAGCAAGGTGGTAGCACCCAAGTTCATGGAGACGTCCCCAGGGCCTaGAGGCGACAGAGGTGTGCT	+
Preference number: 4 (lower is better) Translates to: ILQLSLQQQQGGSTQVHGDVPRA*RRQRCA Trigger: AGCACACCTCTGTCGCCTCCAGGCCCTGGGGACGTC...TCCATGAACTTGGGTGCTACCACCTTGCTGCTGCTGTAGAGACAGCTGCAGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR TCA 90 bp	CCTGCTTTATCAGACACCTTTCCTCCTGGTTTCTCCCATCCCAGGCCCAGGGAGCCTCGCCTCGTGAGCTaGGGTACCACGTCTTGTAGA	+
Preference number: 4 (lower is better) Translates to: PALSDTFPPGFSHPRPREPRLVS*GTTSCR Trigger: TCTACAAGACGTGGTACCTCAGCTCACGAGGCGAGG...CTCCCTGGGCCTGGGATGGGAGAAACCAGGAGGAAAGGTGTCTGATAAAGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR TCA 90 bp	GGAAGCTGGAGTCAGTGCCTAAAAGACTGTCCAAGGGCCAGCCATAGATCAAGTCCAGGGCCGCAGCCGTaGTGCTGTCACTGTCCTGCT	+
Preference number: 4 (lower is better) Translates to: GSWSQCLKDCPRASHRSSPGPQP*CCHCPA Trigger: AGCAGGACAGTGACAGCATCACGGCTGCGGCCCTGG...ACTTGATCTATGGCTGGCCCTTGGACAGTCTTTTAGGCACTGACTCCAGCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS-3UTR GCA 90 bp	GGGAGAACTCAGCATCCCAAGATCTTGAGAACAGCAATGAGCAATCCAACATCTTTCCCCAGCGCGGGCTaGTGGCCTCTGGGACCGCGG	+
Preference number: 4 (lower is better) Translates to: GRTQHPKILRTAMSNPTSFPSAG*WPLGPR Trigger: CCGCGGTCCCAGAGGCCAGCAGCCCGCGCTGGGGAA...AGATGTTGGATTGCTCATTGCTGTTCTCAAGATCTTGGGATGCTGAGTTCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR CCA 90 bp	TGCCCAGCCGTATCCCTCCTCACTCTCAAACATCAGCTGCCCATCCCTACCTCATCACATCGTGCCCTTTaGACACGGGGCCCAGAATCC	+
Preference number: 4 (lower is better) Translates to: CPAVSLLTLKHQLPIPTSSHRAL*TRGPES Trigger: GGATTCTGGGCCCCGTGTCCAAAGGGCACGATGTGA...TGAGGTAGGGATGGGCAGCTGATGTTTGAGAGTGAGGAGGGATACGGCTGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR CCA 90 bp	ATGCCCAGTTCAGCCCAGCCAGTGGAAGCTGCAAGAAGACATATGGTACCACTGGCCTCAGGCATCCCCTaGAAGGGTGGAGTGGTCTCG	+
Preference number: 4 (lower is better) Translates to: MPSSAQPVEAARRHMVPLASGIP*KGGVVS Trigger: CGAGACCACTCCACCCTTCCAGGGGATGCCTGAGGC...CAGTGGTACCATATGTCTTCTTGCAGCTTCCACTGGCTGGGCTGAACTGGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR TCA 90 bp	GTTTCTCCCATCCCAGGCCCAGGGAGAGCTTCATCGGAGATAGGTAGAGACCCTTGGCTTCCGTGGTGCTaGAGGTGCTGCAATGTGAAG	+
Preference number: 4 (lower is better) Translates to: VSPIPGPGRASSEIGRDPWLPWC*RCCNVK Trigger: CTTCACATTGCAGCACCTTCAGCACCACGGAAGCCA...AGGGTCTCTACCTATCTCCGATGAAGCTCTCCCTGGGCCTGGGATGGGAGAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR GCA 90 bp	CTGGGCAGGAAGCGAGTGGTTCTTCTGCTGGGGGCCTCCTCTCCTTTCCACGGATACCAGACCTCTGGATaGAGCCAGGAAAATAGCAAG	+
Preference number: 4 (lower is better) Translates to: LGRKRVVLLLGASSPFHGYQTSG*SQENSK Trigger: CTTGCTATTTTCCTGGCTGCATCCAGAGGTCTGGTA...TCCGTGGAAAGGAGAGGAGGCCCCCAGCAGAAGAACCACTCGCTTCCTGCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR GCA 90 bp	ATGCCCAGTTCAGCCCAGCCAGTGGAAGCTGCAAGAAGACATATGGTACCACTGGAGGCGACAGAGGTGTaGTGGGGTCAGAGAGCAGGT	+
Preference number: 4 (lower is better) Translates to: MPSSAQPVEAARRHMVPLEATEV*WGQRAG Trigger: ACCTGCTCTCTGACCCCAGCACACCTCTGTCGCCTC...CAGTGGTACCATATGTCTTCTTGCAGCTTCCACTGGCTGGGCTGAACTGGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR CCA 90 bp	GTCCAAGGGCCAGCCATAGATCAAGTGCACATATCCCTGACCCAGGTACCATGGTCACATCGTGCCCTTTaGACACGGGGCCCAGAATCC	+
Preference number: 4 (lower is better) Translates to: VQGPAIDQVHISLTQVPWSHRAL*TRGPES Trigger: GGATTCTGGGCCCCGTGTCCAAAGGGCACGATGTGA...CCATGGTACCTGGGTCAGGGATATGTGCACTTGATCTATGGCTGGCCCTTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR CCA 90 bp	TGTCCAAGGGCCAGCCATAGATCAAGTGCACATATCCCTGACCCAGGTACCATGGCGACAGAGGTGTGCTaGGGTCAGAGAGCAGGTACC	+
Preference number: 4 (lower is better) Translates to: CPRASHRSSAHIPDPGTMATEVC*GQRAGT Trigger: GGTACCTGCTCTCTGACCCCAGCACACCTCTGTCGC...CATGGTACCTGGGTCAGGGATATGTGCACTTGATCTATGGCTGGCCCTTGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
3UTR CAA 72 bp	ATATGGCCCTTGAGGCTACAGGGCTCCTCCCTCCTCTaGGGGAACTCAGTTCCCCACTGTGTCTCATTGCCA	+
Preference number: 4 (lower is better) Translates to: IWPLRLQGSSLL*GNSVPHCVSLP Trigger: TGGCAATGAGACACAGTGGGGAACTGAGTTCCCCAAGAGGAGGGAGGAGCCCTGTAGCCTCAAGGGCCATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR GCA 90 bp	GAGCAAGGAAGCTGGAGTCAGTGCCTAAAAGACTGTCCAAGGGCCAGCCATAGAGCTAGCTCTAGCCCATaGTTCTGGGGCTGGTCATGG	+
Preference number: 4 (lower is better) Translates to: EQGSWSQCLKDCPRASHRASSSP*FWGWSW Trigger: CCATGACCAGCCCCAGAAGCATGGGCTAGAGCTAGC...TCTATGGCTGGCCCTTGGACAGTCTTTTAGGCACTGACTCCAGCTTCCTTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS-3UTR GCA 90 bp	ATCCTGCAGCTGTCTCTACAGCAGCAGCAAGGTGGTAGCACCCAAGTTCATGGATGGACCCCGAGCCTTTaGCTGCCTGTACCTGTAGCT	+
Preference number: 4 (lower is better) Translates to: ILQLSLQQQQGGSTQVHGWTPSL*LPVPVA Trigger: AGCTACAGGTACAGGCAGGCAAAGGCTCGGGGTCCA...TCCATGAACTTGGGTGCTACCACCTTGCTGCTGCTGTAGAGACAGCTGCAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR CCA 90 bp	GGGCCAGCCATAGATCAAGTGCACATATCCCTGACCCAGGTACCATGGTTCATGTTCTGGGGCTGGTCATaGCTGGCGTTGGCTTTCAGG	+
Preference number: 4 (lower is better) Translates to: GPAIDQVHISLTQVPWFMFWGWS*LALAFR Trigger: CCTGAAAGCCAACGCCAGCCATGACCAGCCCCAGAA...CATGAACCATGGTACCTGGGTCAGGGATATGTGCACTTGATCTATGGCTGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS-3UTR CCA 90 bp	CCCCAAGCCCCAGGTATAACTGGCATCCCACATCTTGGACCTCATCAGACAACTTTCTGGGGCTGGTCATaGCTGGCGTTGGCTTTCAGG	+
Preference number: 4 (lower is better) Translates to: PQAPGITGIPHLGPHQTTFWGWS*LALAFR Trigger: CCTGAAAGCCAACGCCAGCCATGACCAGCCCCAGAA...AGTTGTCTGATGAGGTCCAAGATGTGGGATGCCAGTTATACCTGGGGCTTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR CCA 90 bp	CCCATCTGTCCTCAGGGAATGAATGGGGTTCTCCCTGGCTGCAGGCCCAGAACAAGTGGTCTCGAAGCCTaGGTTTTCGATTCCTTGGGT	+
Preference number: 4 (lower is better) Translates to: PICPQGMNGVLPGCRPRTSGLEA*VFDSLG Trigger: ACCCAAGGAATCGAAAACCCAGGCTTCGAGACCACT...TGTTCTGGGCCTGCAGCCAGGGAGAACCCCATTCATTCCCTGAGGACAGATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR TCA 90 bp	GGGAGAACTCAGCATCCCAAGATCTTGAGAACAGCAATGAGCAATCCAACATCTCCAGGGCCGCAGCCGTaGTGCTGTCACTGTCCTGCT	+
Preference number: 4 (lower is better) Translates to: GRTQHPKILRTAMSNPTSPGPQP*CCHCPA Trigger: AGCAGGACAGTGACAGCATCACGGCTGCGGCCCTGG...AGATGTTGGATTGCTCATTGCTGTTCTCAAGATCTTGGGATGCTGAGTTCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS-3UTR GCA 90 bp	GGAAGCTGGAGTCAGTGCCTAAAAGACTGTCCAAGGGCCAGCCATAGATCAAGTTGGACCCCGAGCCTTTaGCTGCCTGTACCTGTAGCT	+
Preference number: 4 (lower is better) Translates to: GSWSQCLKDCPRASHRSSWTPSL*LPVPVA Trigger: AGCTACAGGTACAGGCAGGCAAAGGCTCGGGGTCCA...ACTTGATCTATGGCTGGCCCTTGGACAGTCTTTTAGGCACTGACTCCAGCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
3UTR CAA 72 bp	AGCTCGGTCCACAACAGCTACCAGTGGCCCTTTGGCTaGTCAAGAAGCCCCTGCTTTATCAGACACCTTTCC	+
Preference number: 4 (lower is better) Translates to: SSVHNSYQWPFG*SRSPCFIRHLS Trigger: GGAAAGGTGTCTGATAAAGCAGGGGCTTCTTGACAAGCCAAAGGGCCACTGGTAGCTGTTGTGGACCGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR GCA 90 bp	GTTTCTCCCATCCCAGGCCCAGGGAGAGCTTCATCGGAGATAGGTAGAGACCCTATGCTGTCACTGTCCTaGTCATTAGACGCCATGCAT	+
Preference number: 4 (lower is better) Translates to: VSPIPGPGRASSEIGRDPMLSLS*SLDAMH Trigger: ATGCATGGCGTCTAATGAGCAGGACAGTGACAGCAT...AGGGTCTCTACCTATCTCCGATGAAGCTCTCCCTGGGCCTGGGATGGGAGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR GCA 90 bp	GTCCAAGGGCCAGCCATAGATCAAGTGCACATATCCCTGACCCAGGTACCATGGTTCCTTGGGTGTTGCTaGTGTCCATCCTCACCAACT	+
Preference number: 4 (lower is better) Translates to: VQGPAIDQVHISLTQVPWFLGCC*CPSSPT Trigger: AGTTGGTGAGGATGGACAGCAGCAACACCCAAGGAA...CCATGGTACCTGGGTCAGGGATATGTGCACTTGATCTATGGCTGGCCCTTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020301.14
CDS-3UTR GCA 90 bp	GTAGCGTCTGAAAGAGATAGGGGAGGGTCTGTGCATCTTGTAAAAGCAGAGTCTGAGGCGACAGAGGTGTaGTGGGGTCAGAGAGCAGGT	+
Preference number: 4 (lower is better) Translates to: VASERDRGGSVHLVKAESEATEV*WGQRAG Trigger: ACCTGCTCTCTGACCCCAGCACACCTCTGTCGCCTC...AGACTCTGCTTTTACAAGATGCACAGACCCTCCCCTATCTCTTTCAGACGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS-3UTR CCA 90 bp	CGAAGTCAAGTCTCTAGGGAGAACTCAGCATCCCAAGATCTTGAGAACAGCAATGCCTCAGGCATCCCCTaGAAGGGTGGAGTGGTCTCG	+
Preference number: 4 (lower is better) Translates to: RSQVSRENSASQDLENSNASGIP*KGGVVS Trigger: CGAGACCACTCCACCCTTCCAGGGGATGCCTGAGGC...ATTGCTGTTCTCAAGATCTTGGGATGCTGAGTTCTCCCTAGAGACTTGACTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
3UTR CAA 72 bp	TCAGACAACTTGTCTGGGTCCCCAGCAGATAGCTTATaGCTGCTTCCCGGCCTGAAACTCTCTCTTCTCTCC	+
Preference number: 4 (lower is better) Translates to: SDNLSGSPADSL*LLPGLKLSLLS Trigger: GGAGAGAAGAGAGAGTTTCAGGCCGGGAAGCAGCAATAAGCTATCTGCTGGGGACCCAGACAAGTTGTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR CCA 90 bp	TTAGTTCAGCTCCCACCATGGCAGGTTCAGCGCTGGCATGGACACTGCTCTAGCCACATAGAGAGAATATaGAGTGGTGACCTTGAAGGC	+
Preference number: 4 (lower is better) Translates to: LVQLPPWQVQRWHGHCSSHIERI*SGDLEG Trigger: GCCTTCAAGGTCACCACTCCATATTCTCTCTATGTG...GCTAGAGCAGTGTCCATGCCAGCGCTGAACCTGCCATGGTGGGAGCTGAACTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR CCA 90 bp	GGGCCAGCCATAGATCAAGTGCACATATCCCTGACCCAGGTACCATGGTTCATGACCACGTCTTGTAGATaGTCACATCGTGCCCTTTGG	+
Preference number: 4 (lower is better) Translates to: GPAIDQVHISLTQVPWFMTTSCR*SHRALW Trigger: CCAAAGGGCACGATGTGACCATCTACAAGACGTGGT...CATGAACCATGGTACCTGGGTCAGGGATATGTGCACTTGATCTATGGCTGGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR TCA 90 bp	CGAAGTCAAGTCTCTAGGGAGAACTCAGCATCCCAAGATCTTGAGAACAGCAATCCTCGCCTCGTGAGCTaGGGTACCACGTCTTGTAGA	+
Preference number: 4 (lower is better) Translates to: RSQVSRENSASQDLENSNPRLVS*GTTSCR Trigger: TCTACAAGACGTGGTACCTCAGCTCACGAGGCGAGG...ATTGCTGTTCTCAAGATCTTGGGATGCTGAGTTCTCCCTAGAGACTTGACTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR GCA 90 bp	GGGAGAACTCAGCATCCCAAGATCTTGAGAACAGCAATGAGCAATCCAACATCTTGGACCCCGAGCCTTTaGCTGCCTGTACCTGTAGCT	+
Preference number: 4 (lower is better) Translates to: GRTQHPKILRTAMSNPTSWTPSL*LPVPVA Trigger: AGCTACAGGTACAGGCAGGCAAAGGCTCGGGGTCCA...AGATGTTGGATTGCTCATTGCTGTTCTCAAGATCTTGGGATGCTGAGTTCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS-3UTR GCA 90 bp	TGTCCAAGGGCCAGCCATAGATCAAGTGCACATATCCCTGACCCAGGTACCATGATGCTGTCACTGTCCTaGTCATTAGACGCCATGCAT	+
Preference number: 4 (lower is better) Translates to: CPRASHRSSAHIPDPGTMMLSLS*SLDAMH Trigger: ATGCATGGCGTCTAATGAGCAGGACAGTGACAGCAT...CATGGTACCTGGGTCAGGGATATGTGCACTTGATCTATGGCTGGCCCTTGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS-3UTR GCA 90 bp	TTCTCTGTGATCTGGGACTGGCACTCAGCTGGGCTGTCTGTGTTTCAAGAGACTCGATTCCTTGGGTGTTaGTGTCCATCCTCACCAACT	+
Preference number: 4 (lower is better) Translates to: FSVIWDWHSAGLSVFQETRFLGC*CPSSPT Trigger: AGTTGGTGAGGATGGACAGCAACACCCAAGGAATCG...AGTCTCTTGAAACACAGACAGCCCAGCTGAGTGCCAGTCCCAGATCACAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105460.8
CDS-3UTR CCA 90 bp	CGAAGTCAAGTCTCTAGGGAGAACTCAGCATCCCAAGATCTTGAGAACAGCAATTTCTGGGGCTGGTCATaGCTGGCGTTGGCTTTCAGG	+
Preference number: 4 (lower is better) Translates to: RSQVSRENSASQDLENSNFWGWS*LALAFR Trigger: CCTGAAAGCCAACGCCAGCCATGACCAGCCCCAGAA...ATTGCTGTTCTCAAGATCTTGGGATGCTGAGTTCTCCCTAGAGACTTGACTTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS-3UTR CCA 90 bp	ATCCTTAGCAGAATTCCTCTCACCATATTTTCCAGGAAGCCACACCCAACAGATGCGACAGAGGTGTGCTaGGGTCAGAGAGCAGGTACC	+
Preference number: 4 (lower is better) Translates to: ILSRIPLTIFSRKPHPTDATEVC*GQRAGT Trigger: GGTACCTGCTCTCTGACCCCAGCACACCTCTGTCGC...ATCTGTTGGGTGTGGCTTCCTGGAAAATATGGTGAGAGGAATTCTGCTAAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR GCA 90 bp	GGAAGCTGGAGTCAGTGCCTAAAAGACTGTCCAAGGGCCAGCCATAGATCAAGTATGCTGTCACTGTCCTaGTCATTAGACGCCATGCAT	+
Preference number: 4 (lower is better) Translates to: GSWSQCLKDCPRASHRSSMLSLS*SLDAMH Trigger: ATGCATGGCGTCTAATGAGCAGGACAGTGACAGCAT...ACTTGATCTATGGCTGGCCCTTGGACAGTCTTTTAGGCACTGACTCCAGCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS-3UTR CCA 90 bp	TTCTCTGTGATCTGGGACTGGCACTCAGCTGGGCTGTCTGTGTTTCAAGAGACTCACATAGAGAGAATATaGAGTGGTGACCTTGAAGGC	+
Preference number: 4 (lower is better) Translates to: FSVIWDWHSAGLSVFQETHIERI*SGDLEG Trigger: GCCTTCAAGGTCACCACTCCATATTCTCTCTATGTG...AGTCTCTTGAAACACAGACAGCCCAGCTGAGTGCCAGTCCCAGATCACAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR CCA 90 bp	CGAAGTCAAGTCTCTAGGGAGAACTCAGCATCCCAAGATCTTGAGAACAGCAATAGTGGTCTCGAAGCCTaGGTTTTCGATTCCTTGGGT	+
Preference number: 4 (lower is better) Translates to: RSQVSRENSASQDLENSNSGLEA*VFDSLG Trigger: ACCCAAGGAATCGAAAACCCAGGCTTCGAGACCACT...ATTGCTGTTCTCAAGATCTTGGGATGCTGAGTTCTCCCTAGAGACTTGACTTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS-3UTR TCA 90 bp	GAAAGGCTTTCAAGACTGATATGGAGACAGATGTCAAATAAACAAGAACACACGCCAGAATCCTGCAGGTaGGGGTGGCATTCTGTCCCT	+
Preference number: 4 (lower is better) Translates to: ERLSRLIWRQMSNKQEHTPESCR*GWHSVP Trigger: AGGGACAGAATGCCACCCTCACCTGCAGGATTCTGG...CGTGTGTTCTTGTTTATTTGACATCTGTCTCCATATCAGTCTTGAAAGCCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR GCA 90 bp	GAGAACTCAGCATCCCAAGATCTTGAGAACAGCAATGAGCAATCCAACATCTTCCGATTCCTTGGGTGTTaGTGTCCATCCTCACCAACT	+
Preference number: 4 (lower is better) Translates to: ENSASQDLENSNEQSNIFRFLGC*CPSSPT Trigger: AGTTGGTGAGGATGGACAGCAACACCCAAGGAATCG...GAAGATGTTGGATTGCTCATTGCTGTTCTCAAGATCTTGGGATGCTGAGTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105459.2 ENSMUST00000105460.8
3UTR CAA 72 bp	GTCAAGTCTCTAGGGAGAACTCAGCATCCCAAGATCTaGAGAACAGCAATGAGCAATCCAACATCTTCTCCC	+
Preference number: 4 (lower is better) Translates to: VKSLGRTQHPKI*RTAMSNPTSSP Trigger: GGGAGAAGATGTTGGATTGCTCATTGCTGTTCTCAAGATCTTGGGATGCTGAGTTCTCCCTAGAGACTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS-3UTR TCA 90 bp	GGCATGTACGTGACACCTATGCATGTATTCAGGCAAAACATTCATATAGTAAATCCAGAATCCTGCAGGTaGGGGTGGCATTCTGTCCCT	+
Preference number: 4 (lower is better) Translates to: GMYVTPMHVFRQNIHIVNPESCR*GWHSVP Trigger: AGGGACAGAATGCCACCCTCACCTGCAGGATTCTGG...ATTTACTATATGAATGTTTTGCCTGAATACATGCATAGGTGTCACGTACATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR GCA 90 bp	GAGAACTCAGCATCCCAAGATCTTGAGAACAGCAATGAGCAATCCAACATCTTCTACCAGACCTCTGGATaGAGCCAGGAAAATAGCAAG	+
Preference number: 4 (lower is better) Translates to: ENSASQDLENSNEQSNIFYQTSG*SQENSK Trigger: CTTGCTATTTTCCTGGCTGCATCCAGAGGTCTGGTA...GAAGATGTTGGATTGCTCATTGCTGTTCTCAAGATCTTGGGATGCTGAGTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS CCA 90 bp	CCCACGATGCAGGCGCCGGTGGCCAGGGCCGCAGCCGTGATGCCGTaGTGGTCAGAAGCTAGCTCTAGCCCATGCTTCTGGGGCTGGTCA	+
Preference number: 5 (lower is better) Translates to: PTMQAPVARAAAVMP*WSEASSSPCFWGWS Trigger: TGACCAGCCCCAGAAGCATGGGCTAGAGCTAGCTTCTGACCACCACGGCATCACGGCTGCGGCCCTGGCCACCGGCGCCTGCATCGTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170507.8
CDS GCA 90 bp	CAGGCGCCGGTGGCCAGGGCCGCAGCCGTGATGCTGTCACTGTCCTaGTCATTAGACGCCATGCATGTGGACCCCGAGCCTTTGCCTGCC	+
Preference number: 5 (lower is better) Translates to: QAPVARAAAVMLSLS*SLDAMHVDPEPLPA Trigger: GGCAGGCAAAGGCTCGGGGTCCACATGCATGGCGTCTAATGAGCAGGACAGTGACAGCATCACGGCTGCGGCCCTGGCCACCGGCGCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS CCA 90 bp	ACGATGCAGGCGCCGGTGGCCAGGGCCGCAGCCGTGATGCCGTGGTaGTCAGAAGCTAGCTCTAGCCCATGCTTCTGGGGCTGGTCATGG	+
Preference number: 5 (lower is better) Translates to: TMQAPVARAAAVMPW*SEASSSPCFWGWSW Trigger: CCATGACCAGCCCCAGAAGCATGGGCTAGAGCTAGCTTCTGACCACCACGGCATCACGGCTGCGGCCCTGGCCACCGGCGCCTGCATCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170507.8
CDS TCA 90 bp	AGAGGATTCCCACGATGCAGGCGCCGGTGGCCAGGGCCGCAGCCGTaGTGCCGTGGTGGTCAGAAGCTAGCTCTAGCCCATGCTTCTGGG	+
Preference number: 5 (lower is better) Translates to: RGFPRCRRRWPGPQP*CRGGQKLALAHASG Trigger: CCCAGAAGCATGGGCTAGAGCTAGCTTCTGACCACCACGGCATCACGGCTGCGGCCCTGGCCACCGGCGCCTGCATCGTGGGAATCCTCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170507.8
CDS CCA 90 bp	CCGAAGGTTGCCGCTGGGCCACATAGGACAGTGGCGGCCTGGTCTTaGCCTCAGGCATCCCCTGGAAGGGTGGAGTGGTCTCGAAGCCTG	+
Preference number: 5 (lower is better) Translates to: PKVAAGPHRTVAAWS*PQASPGRVEWSRSL Trigger: CAGGCTTCGAGACCACTCCACCCTTCCAGGGGATGCCTGAGGCCAAGACCAGGCCGCCACTGTCCTATGTGGCCCAGCGGCAACCTTCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS TCA 90 bp	TGGAGGCGACAGAGGTGTGCTGGGGTCAGAGAGCAGGTACCGTCCTaGCTCCGAAGGTTGCCGCTGGGCCACATAGGACAGTGGCGGCCT	+
Preference number: 5 (lower is better) Translates to: WRRQRCAGVREQVPS*LRRLPLGHIGQWRP Trigger: AGGCCGCCACTGTCCTATGTGGCCCAGCGGCAACCTTCGGAGTCAGGACGGTACCTGCTCTCTGACCCCAGCACACCTCTGTCGCCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS CCA 90 bp	CTGACTCCGAAGGTTGCCGCTGGGCCACATAGGACAGTGGCGGCCTaGTCTTGGCCTCAGGCATCCCCTGGAAGGGTGGAGTGGTCTCGA	+
Preference number: 5 (lower is better) Translates to: LTPKVAAGPHRTVAA*SWPQASPGRVEWSR Trigger: TCGAGACCACTCCACCCTTCCAGGGGATGCCTGAGGCCAAGACCAGGCCGCCACTGTCCTATGTGGCCCAGCGGCAACCTTCGGAGTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS CCA 90 bp	CCCTGGAAGGGTGGAGTGGTCTCGAAGCCTGGGTTTTCGATTCCTTaGGTGTTGCTGCTGTCCATCCTCACCAACTCCTGGGCACGGCGG	+
Preference number: 5 (lower is better) Translates to: PWKGGVVSKPGFSIP*VLLLSILTNSWARR Trigger: CCGCCGTGCCCAGGAGTTGGTGAGGATGGACAGCAGCAACACCCAAGGAATCGAAAACCCAGGCTTCGAGACCACTCCACCCTTCCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020301.14
CDS GCA 90 bp	GTGGAGTGGTCTCGAAGCCTGGGTTTTCGATTCCTTGGGTGTTGCTaGTGTCCATCCTCACCAACTCCTGGGCACGGCGGTGAGAGGCCA	+
Preference number: 5 (lower is better) Translates to: VEWSRSLGFRFLGCC*CPSSPTPGHGGERP Trigger: TGGCCTCTCACCGCCGTGCCCAGGAGTTGGTGAGGATGGACAGCAGCAACACCCAAGGAATCGAAAACCCAGGCTTCGAGACCACTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020301.14
CDS GCA 90 bp	AGGGTGGAGTGGTCTCGAAGCCTGGGTTTTCGATTCCTTGGGTGTTaGTGCTGTCCATCCTCACCAACTCCTGGGCACGGCGGTGAGAGG	+
Preference number: 5 (lower is better) Translates to: RVEWSRSLGFRFLGC*CCPSSPTPGHGGER Trigger: CCTCTCACCGCCGTGCCCAGGAGTTGGTGAGGATGGACAGCAGCAACACCCAAGGAATCGAAAACCCAGGCTTCGAGACCACTCCACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020301.14
CDS GCA 90 bp	AGGGTGGAGTGGTCTCGAAGCCTGGGTTTTCGATTCCTTGGGTGTTaGTGTCCATCCTCACCAACTCCTGGGCACGGCGGTGAGAGGCCA	+
Preference number: 5 (lower is better) Translates to: RVEWSRSLGFRFLGC*CPSSPTPGHGGERP Trigger: TGGCCTCTCACCGCCGTGCCCAGGAGTTGGTGAGGATGGACAGCAACACCCAAGGAATCGAAAACCCAGGCTTCGAGACCACTCCACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105459.2 ENSMUST00000105460.8
CDS-3UTR CAA 90 bp	CCTGCTTTATCAGACACCTTTCCTCCTGGTTTCTCCCATCCCAGGCCCAGGGAGTGGTCATGGCTGGCGTaGGCTTTCAGGTGGCTTCCG	+
Preference number: 5 (lower is better) Translates to: PALSDTFPPGFSHPRPREWSWLA*AFRWLP Trigger: CGGAAGCCACCTGAAAGCCAACGCCAGCCATGACCA...CTCCCTGGGCCTGGGATGGGAGAAACCAGGAGGAAAGGTGTCTGATAAAGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR CAA 90 bp	CGTAGCCTAGCCGCCTCCTCCAAGTCCTCCGGGGAGCAGTTCTCAAAGAAGGAGTCGATTCCTTGGGTGTaGCTGCTGTCCATCCTCACC	+
Preference number: 5 (lower is better) Translates to: RSLAASSKSSGEQFSKKESIPWV*LLSILT Trigger: GGTGAGGATGGACAGCAGCAACACCCAAGGAATCGA...CTCCTTCTTTGAGAACTGCTCCCCGGAGGACTTGGAGGAGGCGGCTAGGCTACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020301.14
CDS TCA 90 bp	GGCTGGTCATGGCTGGCGTTGGCTTTCAGGTGGCTTCCGTGGTGCTaGAGGTGCTGCAATGTGAAGTTGCGTATGGGCCGGTGTTCTTTG	+
Preference number: 5 (lower is better) Translates to: GWSWLALAFRWLPWC*RCCNVKLRMGRCSL Trigger: CAAAGAACACCGGCCCATACGCAACTTCACATTGCAGCACCTTCAGCACCACGGAAGCCACCTGAAAGCCAACGCCAGCCATGACCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8 ENSMUST00000170507.8
CDS-3UTR CAA 90 bp	CGTAGCCTAGCCGCCTCCTCCAAGTCCTCCGGGGAGCAGTTCTCAAAGAAGGAGTATGGAGTGGTGACCTaGAAGGCTGCTACCAGACCT	+
Preference number: 5 (lower is better) Translates to: RSLAASSKSSGEQFSKKEYGVVT*KAATRP Trigger: AGGTCTGGTAGCAGCCTTCAAGGTCACCACTCCATA...CTCCTTCTTTGAGAACTGCTCCCCGGAGGACTTGGAGGAGGCGGCTAGGCTACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR CAA 90 bp	GTCCAAGGGCCAGCCATAGATCAAGTGCACATATCCCTGACCCAGGTACCATGGTGGTCATGGCTGGCGTaGGCTTTCAGGTGGCTTCCG	+
Preference number: 5 (lower is better) Translates to: VQGPAIDQVHISLTQVPWWSWLA*AFRWLP Trigger: CGGAAGCCACCTGAAAGCCAACGCCAGCCATGACCA...CCATGGTACCTGGGTCAGGGATATGTGCACTTGATCTATGGCTGGCCCTTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS GCA 90 bp	AGAATATGGAGTGGTGACCTTGAAGGCTGCTACCAGACCTCTGGATaGAGCCAGGAAAATAGCAAGGAGCAGGGTTCCCCAGCGCGGGCT	+
Preference number: 5 (lower is better) Translates to: RIWSGDLEGCYQTSG*SQENSKEQGSPARA Trigger: AGCCCGCGCTGGGGAACCCTGCTCCTTGCTATTTTCCTGGCTGCATCCAGAGGTCTGGTAGCAGCCTTCAAGGTCACCACTCCATATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8 ENSMUST00000170507.8
CDS-3UTR CAA 90 bp	ATGCCCAGTTCAGCCCAGCCAGTGGAAGCTGCAAGAAGACATATGGTACCACTGTGGTCATGGCTGGCGTaGGCTTTCAGGTGGCTTCCG	+
Preference number: 5 (lower is better) Translates to: MPSSAQPVEAARRHMVPLWSWLA*AFRWLP Trigger: CGGAAGCCACCTGAAAGCCAACGCCAGCCATGACCA...CAGTGGTACCATATGTCTTCTTGCAGCTTCCACTGGCTGGGCTGAACTGGGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS TCA 90 bp	GTATGGGCCGGTGTTCTTTGCACATCTGGACCTCGCCTCGTGAGCTaGGGTACCACGTCTTGTAGATGGTCACATCGTGCCCTTTGGACA	+
Preference number: 5 (lower is better) Translates to: VWAGVLCTSGPRLVS*GTTSCRWSHRALWT Trigger: TGTCCAAAGGGCACGATGTGACCATCTACAAGACGTGGTACCTCAGCTCACGAGGCGAGGTCCAGATGTGCAAAGAACACCGGCCCATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8 ENSMUST00000170507.8
CDS TCA 90 bp	GTTGCGTATGGGCCGGTGTTCTTTGCACATCTGGACCTCGCCTCGTaGGCTGAGGTACCACGTCTTGTAGATGGTCACATCGTGCCCTTT	+
Preference number: 5 (lower is better) Translates to: VAYGPVFFAHLDLAS*AEVPRLVDGHIVPF Trigger: AAAGGGCACGATGTGACCATCTACAAGACGTGGTACCTCAGCTCACGAGGCGAGGTCCAGATGTGCAAAGAACACCGGCCCATACGCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8 ENSMUST00000170507.8
CDS CCA 90 bp	GGTGAGGGTGGCATTCTGTCCCTCGGGACACACATAGAGAGAATATaGAGTGGTGACCTTGAAGGCTGCTACCAGACCTCTGGATGCAGC	+
Preference number: 5 (lower is better) Translates to: GEGGILSLGTHIERI*SGDLEGCYQTSGCS Trigger: GCTGCATCCAGAGGTCTGGTAGCAGCCTTCAAGGTCACCACTCCATATTCTCTCTATGTGTGTCCCGAGGGACAGAATGCCACCCTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8 ENSMUST00000170507.8
CDS-3UTR CAA 90 bp	CCCATGCCCAGTTCAGCCCAGCCAGTGGAAGCTGCAAGAAGACATATGGTACCATCCCTTGGGGTCACATaGCGCAGGGTGATAGAGAAG	+
Preference number: 5 (lower is better) Translates to: PMPSSAQPVEAARRHMVPSLGVT*RRVIEK Trigger: CTTCTCTATCACCCTGCGCAATGTGACCCCAAGGGA...TGGTACCATATGTCTTCTTGCAGCTTCCACTGGCTGGGCTGAACTGGGCATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS-3UTR CAA 90 bp	ATGCCCAGTTCAGCCCAGCCAGTGGAAGCTGCAAGAAGACATATGGTACCACTGTCCCTTGGGGTCACATaGCGCAGGGTGATAGAGAAG	+
Preference number: 5 (lower is better) Translates to: MPSSAQPVEAARRHMVPLSLGVT*RRVIEK Trigger: CTTCTCTATCACCCTGCGCAATGTGACCCCAAGGGA...CAGTGGTACCATATGTCTTCTTGCAGCTTCCACTGGCTGGGCTGAACTGGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS GCA 90 bp	CTCGGGACACACATAGAGAGAATATGGAGTGGTGACCTTGAAGGCTaGTACCAGACCTCTGGATGCAGCCAGGAAAATAGCAAGGAGCAG	+
Preference number: 5 (lower is better) Translates to: LGTHIERIWSGDLEG*YQTSGCSQENSKEQ Trigger: CTGCTCCTTGCTATTTTCCTGGCTGCATCCAGAGGTCTGGTAGCAGCCTTCAAGGTCACCACTCCATATTCTCTCTATGTGTGTCCCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8 ENSMUST00000170507.8
CDS-3UTR CAA 90 bp	GTAGCGTCTGAAAGAGATAGGGGAGGGTCTGTGCATCTTGTAAAAGCAGAGTCTTCCCTTGGGGTCACATaGCGCAGGGTGATAGAGAAG	+
Preference number: 5 (lower is better) Translates to: VASERDRGGSVHLVKAESSLGVT*RRVIEK Trigger: CTTCTCTATCACCCTGCGCAATGTGACCCCAAGGGA...AGACTCTGCTTTTACAAGATGCACAGACCCTCCCCTATCTCTTTCAGACGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS-3UTR CAA 90 bp	GTAGCGTCTGAAAGAGATAGGGGAGGGTCTGTGCATCTTGTAAAAGCAGAGTCTTATGGAGTGGTGACCTaGAAGGCTGCTACCAGACCT	+
Preference number: 5 (lower is better) Translates to: VASERDRGGSVHLVKAESYGVVT*KAATRP Trigger: AGGTCTGGTAGCAGCCTTCAAGGTCACCACTCCATA...AGACTCTGCTTTTACAAGATGCACAGACCCTCCCCTATCTCTTTCAGACGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8
CDS CCA 72 bp	GCGCCGGTGGCCAGGGCCGCAGCCGTGATGCCGTGGTaGTCAGAAGCTAGCTCTAGCCCATGCTTCTGGGGC	+
Preference number: 6 (lower is better) Translates to: APVARAAAVMPW*SEASSSPCFWG Trigger: GCCCCAGAAGCATGGGCTAGAGCTAGCTTCTGACCACCACGGCATCACGGCTGCGGCCCTGGCCACCGGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170507.8
CDS TCA 72 bp	CCACGATGCAGGCGCCGGTGGCCAGGGCCGCAGCCGTaGTGCCGTGGTGGTCAGAAGCTAGCTCTAGCCCAT	+
Preference number: 6 (lower is better) Translates to: PRCRRRWPGPQP*CRGGQKLALAH Trigger: ATGGGCTAGAGCTAGCTTCTGACCACCACGGCATCACGGCTGCGGCCCTGGCCACCGGCGCCTGCATCGTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170507.8
CDS CCA 72 bp	CAGGCGCCGGTGGCCAGGGCCGCAGCCGTGATGCCGTaGTGGTCAGAAGCTAGCTCTAGCCCATGCTTCTGG	+
Preference number: 6 (lower is better) Translates to: QAPVARAAAVMP*WSEASSSPCFW Trigger: CCAGAAGCATGGGCTAGAGCTAGCTTCTGACCACCACGGCATCACGGCTGCGGCCCTGGCCACCGGCGCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170507.8
CDS CCA 72 bp	AAGGTTGCCGCTGGGCCACATAGGACAGTGGCGGCCTaGTCTTGGCCTCAGGCATCCCCTGGAAGGGTGGAG	+
Preference number: 6 (lower is better) Translates to: KVAAGPHRTVAA*SWPQASPGRVE Trigger: CTCCACCCTTCCAGGGGATGCCTGAGGCCAAGACCAGGCCGCCACTGTCCTATGTGGCCCAGCGGCAACCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS GCA 72 bp	GTGGCCAGGGCCGCAGCCGTGATGCTGTCACTGTCCTaGTCATTAGACGCCATGCATGTGGACCCCGAGCCT	+
Preference number: 6 (lower is better) Translates to: VARAAAVMLSLS*SLDAMHVDPEP Trigger: AGGCTCGGGGTCCACATGCATGGCGTCTAATGAGCAGGACAGTGACAGCATCACGGCTGCGGCCCTGGCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS CCA 72 bp	GACAGTGGCGGCCTGGTCTTGGCCTCAGGCATCCCCTaGAAGGGTGGAGTGGTCTCGAAGCCTGGGTTTTCG	+
Preference number: 6 (lower is better) Translates to: DSGGLVLASGIP*KGGVVSKPGFS Trigger: CGAAAACCCAGGCTTCGAGACCACTCCACCCTTCCAGGGGATGCCTGAGGCCAAGACCAGGCCGCCACTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS TCA 72 bp	CAGAGGTGTGCTGGGGTCAGAGAGCAGGTACCGTCCTaGCTCCGAAGGTTGCCGCTGGGCCACATAGGACAG	+
Preference number: 6 (lower is better) Translates to: QRCAGVREQVPS*LRRLPLGHIGQ Trigger: CTGTCCTATGTGGCCCAGCGGCAACCTTCGGAGTCAGGACGGTACCTGCTCTCTGACCCCAGCACACCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS CAA 90 bp	CCCCTGGAAGGGTGGAGTGGTCTCGAAGCCTGGGTTTTCGATTCCTaGGGTGTTGCTGCTGTCCATCCTCACCAACTCCTGGGCACGGCG	+
Preference number: 6 (lower is better) Translates to: PLEGWSGLEAWVFDS*GVAAVHPHQLLGTA Trigger: CGCCGTGCCCAGGAGTTGGTGAGGATGGACAGCAGCAACACCCAAGGAATCGAAAACCCAGGCTTCGAGACCACTCCACCCTTCCAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020301.14
CDS CAA 90 bp	CCCCTGGAAGGGTGGAGTGGTCTCGAAGCCTGGGTTTTCGATTCCTaGGGTGTTGCTGTCCATCCTCACCAACTCCTGGGCACGGCGGTG	+
Preference number: 6 (lower is better) Translates to: PLEGWSGLEAWVFDS*GVAVHPHQLLGTAV Trigger: CACCGCCGTGCCCAGGAGTTGGTGAGGATGGACAGCAACACCCAAGGAATCGAAAACCCAGGCTTCGAGACCACTCCACCCTTCCAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105459.2 ENSMUST00000105460.8
CDS TCA 72 bp	TGGCTGGCGTTGGCTTTCAGGTGGCTTCCGTGGTGCTaGAGGTGCTGCAATGTGAAGTTGCGTATGGGCCGG	+
Preference number: 6 (lower is better) Translates to: WLALAFRWLPWC*RCCNVKLRMGR Trigger: CCGGCCCATACGCAACTTCACATTGCAGCACCTTCAGCACCACGGAAGCCACCTGAAAGCCAACGCCAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8 ENSMUST00000170507.8
CDS CCA 72 bp	CTAGCTCTAGCCCATGCTTCTGGGGCTGGTCATGGCTaGCGTTGGCTTTCAGGTGGCTTCCGTGGTGCTGAA	+
Preference number: 6 (lower is better) Translates to: LALAHASGAGHG*RWLSGGFRGAE Trigger: TTCAGCACCACGGAAGCCACCTGAAAGCCAACGCCAGCCATGACCAGCCCCAGAAGCATGGGCTAGAGCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8 ENSMUST00000170507.8
CDS CAA 72 bp	GTGGTCTCGAAGCCTGGGTTTTCGATTCCTTGGGTGTaGCTGTCCATCCTCACCAACTCCTGGGCACGGCGG	+
Preference number: 6 (lower is better) Translates to: VVSKPGFSIPWV*LSILTNSWARR Trigger: CCGCCGTGCCCAGGAGTTGGTGAGGATGGACAGCAACACCCAAGGAATCGAAAACCCAGGCTTCGAGACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105459.2 ENSMUST00000105460.8
CDS GCA 72 bp	TCTCGAAGCCTGGGTTTTCGATTCCTTGGGTGTTGCTaGTGTCCATCCTCACCAACTCCTGGGCACGGCGGT	+
Preference number: 6 (lower is better) Translates to: SRSLGFRFLGCC*CPSSPTPGHGG Trigger: ACCGCCGTGCCCAGGAGTTGGTGAGGATGGACAGCAGCAACACCCAAGGAATCGAAAACCCAGGCTTCGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020301.14
CDS GCA 72 bp	TGGTCTCGAAGCCTGGGTTTTCGATTCCTTGGGTGTTaGTGCTGTCCATCCTCACCAACTCCTGGGCACGGC	+
Preference number: 6 (lower is better) Translates to: WSRSLGFRFLGC*CCPSSPTPGHG Trigger: GCCGTGCCCAGGAGTTGGTGAGGATGGACAGCAGCAACACCCAAGGAATCGAAAACCCAGGCTTCGAGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020301.14
CDS CAA 72 bp	GTGGTCTCGAAGCCTGGGTTTTCGATTCCTTGGGTGTaGCTGCTGTCCATCCTCACCAACTCCTGGGCACGG	+
Preference number: 6 (lower is better) Translates to: VVSKPGFSIPWV*LLSILTNSWAR Trigger: CCGTGCCCAGGAGTTGGTGAGGATGGACAGCAGCAACACCCAAGGAATCGAAAACCCAGGCTTCGAGACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020301.14
CDS CAA 72 bp	GGGTGGAGTGGTCTCGAAGCCTGGGTTTTCGATTCCTaGGGTGTTGCTGTCCATCCTCACCAACTCCTGGGC	+
Preference number: 6 (lower is better) Translates to: GWSGLEAWVFDS*GVAVHPHQLLG Trigger: GCCCAGGAGTTGGTGAGGATGGACAGCAACACCCAAGGAATCGAAAACCCAGGCTTCGAGACCACTCCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105459.2 ENSMUST00000105460.8
CDS TCA 72 bp	GGGCCGGTGTTCTTTGCACATCTGGACCTCGCCTCGTaGGCTGAGGTACCACGTCTTGTAGATGGTCACATC	+
Preference number: 6 (lower is better) Translates to: GPVFFAHLDLAS*AEVPRLVDGHI Trigger: GATGTGACCATCTACAAGACGTGGTACCTCAGCTCACGAGGCGAGGTCCAGATGTGCAAAGAACACCGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8 ENSMUST00000170507.8
CDS GCA 72 bp	AAGTTACCGTGGTGGTCAGAAGCTAGCTCTAGCCCATaGTTCTGGGGCTGGTCATGGCTGGCGTTGGCTTTC	+
Preference number: 6 (lower is better) Translates to: KLPWWSEASSSP*FWGWSWLALAF Trigger: GAAAGCCAACGCCAGCCATGACCAGCCCCAGAAGCATGGGCTAGAGCTAGCTTCTGACCACCACGGTAACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS CCA 72 bp	GTGAAGTTGCGTATGGGCCGGTGTTCTTTGCACATCTaGACCTCGCCTCGTGAGCTGAGGTACCACGTCTTG	+
Preference number: 6 (lower is better) Translates to: VKLRMGRCSLHI*TSPRELRYHVL Trigger: CAAGACGTGGTACCTCAGCTCACGAGGCGAGGTCCAGATGTGCAAAGAACACCGGCCCATACGCAACTTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8 ENSMUST00000170507.8
CDS CCA 72 bp	ACCCCGAGCCTTTGCCTGCCTGTACCTGTAGCTCCATaGACCCGTAGAACCGTTGTTCTGGGTGGTGGTTTT	+
Preference number: 6 (lower is better) Translates to: TPSLCLPVPVAP*TRRTVVLGGGF Trigger: AAAACCACCACCCAGAACAACGGTTCTACGGGTCCATGGAGCTACAGGTACAGGCAGGCAAAGGCTCGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105459.2 ENSMUST00000105460.8
CDS CCA 72 bp	GGTGGAGTGGTCTCGAAGCCTGGGTTTTCGATTCCTTaGGTGTTGCTGCTGTCCATCCTCACCAACTCCTGG	+
Preference number: 6 (lower is better) Translates to: GGVVSKPGFSIP*VLLLSILTNSW Trigger: CCAGGAGTTGGTGAGGATGGACAGCAGCAACACCCAAGGAATCGAAAACCCAGGCTTCGAGACCACTCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020301.14
CDS CCA 72 bp	GGTGGAGTGGTCTCGAAGCCTGGGTTTTCGATTCCTTaGGTGTTGCTGTCCATCCTCACCAACTCCTGGGCA	+
Preference number: 6 (lower is better) Translates to: GGVVSKPGFSIP*VLLSILTNSWA Trigger: TGCCCAGGAGTTGGTGAGGATGGACAGCAACACCCAAGGAATCGAAAACCCAGGCTTCGAGACCACTCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105459.2 ENSMUST00000105460.8
CDS CAA 72 bp	GGGTGGAGTGGTCTCGAAGCCTGGGTTTTCGATTCCTaGGGTGTTGCTGCTGTCCATCCTCACCAACTCCTG	+
Preference number: 6 (lower is better) Translates to: GWSGLEAWVFDS*GVAAVHPHQLL Trigger: CAGGAGTTGGTGAGGATGGACAGCAGCAACACCCAAGGAATCGAAAACCCAGGCTTCGAGACCACTCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020301.14
CDS TCA 72 bp	GGTGTTCTTTGCACATCTGGACCTCGCCTCGTGAGCTaGGGTACCACGTCTTGTAGATGGTCACATCGTGCC	+
Preference number: 6 (lower is better) Translates to: GVLCTSGPRLVS*GTTSCRWSHRA Trigger: GGCACGATGTGACCATCTACAAGACGTGGTACCTCAGCTCACGAGGCGAGGTCCAGATGTGCAAAGAACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8 ENSMUST00000170507.8
CDS GCA 72 bp	AGTGGTGACCTTGAAGGCTGCTACCAGACCTCTGGATaGAGCCAGGAAAATAGCAAGGAGCAGGGTTCCCCA	+
Preference number: 6 (lower is better) Translates to: SGDLEGCYQTSG*SQENSKEQGSP Trigger: TGGGGAACCCTGCTCCTTGCTATTTTCCTGGCTGCATCCAGAGGTCTGGTAGCAGCCTTCAAGGTCACCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8 ENSMUST00000170507.8
CDS CCA 72 bp	GGCATTCTGTCCCTCGGGACACACATAGAGAGAATATaGAGTGGTGACCTTGAAGGCTGCTACCAGACCTCT	+
Preference number: 6 (lower is better) Translates to: GILSLGTHIERI*SGDLEGCYQTS Trigger: AGAGGTCTGGTAGCAGCCTTCAAGGTCACCACTCCATATTCTCTCTATGTGTGTCCCGAGGGACAGAATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020301.14 ENSMUST00000105460.8 ENSMUST00000170507.8

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