Pregenerated sensors for VSIG8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049598Ensembl transcript IDs: ENSMUST00000061835.10, ENSMUST00000177086.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGGCTTCTCAGAGGGAAATTTCCTTACCACCGCTAGGTGGCCAATaGGAGAGCCAGGTCTGCTGGCCCGAACCTGTCCCCAGCTGCGGG | + |
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Preference number: 1 (lower is better) Translates to: LASQREISLPPLGGQ*ESQVCWPEPVPSCG Trigger: CCCGCAGCTGGGGACAGGTTCGGGCCAGCAGACCTGGCTCTCTCATTGGCCACCTAGCGGTGGTAAGGAAATTTCCCTCTGAGAAGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGCCCTCGCCTTGGCTGGGGACATCTGGGTTGTACCTCTGCGGTTCTGGGATCTCCCTTCCTCTCCCTaGAAACCAGGGGTGAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: GALALAGDIWVVPLRFWDLPSSP*KPGVRE Trigger: CTCCCTCACCCCTGGTTTCCAGGGAGAGGAAGGGAG...ATCCCAGAACCGCAGAGGTACAACCCAGATGTCCCCAGCCAAGGCGAGGGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGCCCTCGCCTTGGCTGGGGACATCTGGGTTGTACCTCTGCGGTTCTGGGATCTTACCACCGCTAGGTaGCCAATGAGAGAGCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: GALALAGDIWVVPLRFWDLTTAR*PMREPG Trigger: ACCTGGCTCTCTCATTGGCCACCTAGCGGTGGTAAG...ATCCCAGAACCGCAGAGGTACAACCCAGATGTCCCCAGCCAAGGCGAGGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCTAACACTGTTGCCTTGGAGCTCAGATCTCACACACAGAGCAATTCAGCCCCCACCTACCCAGGGCTaGGGGGCCCTCGCCTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: VLTLLPWSSDLTHRAIQPPPTQG*GALALA Trigger: AGCCAAGGCGAGGGCCCCCCAGCCCTGGGTAGGTGG...GGGCTGAATTGCTCTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCACTACAGGGGAGGAGGGTCTGCCCGGCTTGGCTTCTCAGAGGGAAATTCTTACCACCGCTAGGTaGCCAATGAGAGAGCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: PPTTGEEGLPGLASQREILTTAR*PMREPG Trigger: ACCTGGCTCTCTCATTGGCCACCTAGCGGTGGTAAG...AATTTCCCTCTGAGAAGCCAAGCCGGGCAGACCCTCCTCCCCTGTAGTGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTATTGTGCTAACACTGTTGCCTTGGAGCTCAGATCTCACACACAGAGCAATCTCCCTTCCTCTCCCTaGAAACCAGGGGTGAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LYCANTVALELRSHTQSNLPSSP*KPGVRE Trigger: CTCCCTCACCCCTGGTTTCCAGGGAGAGGAAGGGAG...ATTGCTCTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTTTCTTTATTGTGCTAACACTGTTGCCTTGGAGCTCAGATCTCACACACAGGGTGAGGGAGAGCTCTaGACTGTTTTCTGTCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: KFLYCANTVALELRSHTQGEGEL*TVFCLP Trigger: GGGGAGACAGAAAACAGTTCAGAGCTCTCCCTCACC...CTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAAGAAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| 3UTR-3UTR TCA 90 bp | TTTATTGTGCTAACACTGTTGCCTTGGAGCTCAGATCTCACACACAGAGCAATTGGTGAGGGAGAGCTCTaGACTGTTTTCTGTCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: FIVLTLLPWSSDLTHRAIGEGEL*TVFCLP Trigger: GGGGAGACAGAAAACAGTTCAGAGCTCTCCCTCACC...AATTGCTCTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| 3UTR GCA 72 bp | CCCCCGCCTCTCCTCCCACTACAGGGGAGGAGGGTCTaGCCGGCTTGGCTTCTCAGAGGGAAATTTCCTTAC | + |
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Preference number: 3 (lower is better) Translates to: PPPLLPLQGRRV*PAWLLRGKFPY Trigger: GTAAGGAAATTTCCCTCTGAGAAGCCAAGCCGGGCAGACCCTCCTCCCCTGTAGTGGGAGGAGAGGCGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| 3UTR GCA 72 bp | CCCTCGCCTTGGCTGGGGACATCTGGGTTGTACCTCTaGGGTTCTGGGATACCGACAGCTCTCCTCTCCCTT | + |
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Preference number: 3 (lower is better) Translates to: PSPWLGTSGLYL*GSGIPTALLSL Trigger: AAGGGAGAGGAGAGCTGTCGGTATCCCAGAACCGCAGAGGTACAACCCAGATGTCCCCAGCCAAGGCGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| 3UTR CCA 72 bp | TTGGCTGGGGACATCTGGGTTGTACCTCTGCGGTTCTaGGATACCGACAGCTCTCCTCTCCCTTCCTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: LAGDIWVVPLRF*DTDSSPLPSSP Trigger: GGGAGAGGAAGGGAGAGGAGAGCTGTCGGTATCCCAGAACCGCAGAGGTACAACCCAGATGTCCCCAGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| 3UTR CCA 72 bp | TCTTTAAGTTTCTTTATTGTGCTAACACTGTTGCCTTaGAGCTCAGATCTCACACACAGAGCAATTCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: SLSFFIVLTLLP*SSDLTHRAIQP Trigger: GGGCTGAATTGCTCTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAAGAAACTTAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR TCA 90 bp | TGGCCAATGAGAGAGCCAGGTCTGCTGGCCCGAACCTGTCCCCAGCTGCGGGCAGTACTGGCTGGGGTCTaGGGCTGCAAAGCGGACCCT | + |
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Preference number: 4 (lower is better) Translates to: WPMREPGLLARTCPQLRAVLAGV*GCKADP Trigger: AGGGTCCGCTTTGCAGCCTCAGACCCCAGCCAGTAC...TGCCCGCAGCTGGGGACAGGTTCGGGCCAGCAGACCTGGCTCTCTCATTGGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
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| CDS-3UTR TCA 90 bp | AGGTGGCCAATGAGAGAGCCAGGTCTGCTGGCCCGAACCTGTCCCCAGCTGCGGCGCAGCAGCAGCAGATaGGCCCCCAGATGCCTAGTG | + |
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Preference number: 4 (lower is better) Translates to: RWPMREPGLLARTCPQLRRSSSR*APRCLV Trigger: CACTAGGCATCTGGGGGCTCATCTGCTGCTGCTGCG...CCGCAGCTGGGGACAGGTTCGGGCCAGCAGACCTGGCTCTCTCATTGGCCACCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR CCA 90 bp | CTCCCCCGCCTCTCCTCCCACTACAGGGGAGGAGGGTCTGCCCGGCTTGGCTTCATGGAGGCATCGTACTaGCTGGGGTCTGAGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LPRLSSHYRGGGSARLGFMEASY*LGSEAA Trigger: TGCAGCCTCAGACCCCAGCCAGTACGATGCCTCCAT...GAAGCCAAGCCGGGCAGACCCTCCTCCCCTGTAGTGGGAGGAGAGGCGGGGGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
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| CDS-3UTR CCA 90 bp | AGGTGGCCAATGAGAGAGCCAGGTCTGCTGGCCCGAACCTGTCCCCAGCTGCGGTCCTGGTGGCCATGGTaGTCTTCTTCACCCGGCACT | + |
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Preference number: 4 (lower is better) Translates to: RWPMREPGLLARTCPQLRSWWPW*SSSPGT Trigger: AGTGCCGGGTGAAGAAGACCACCATGGCCACCAGGA...CCGCAGCTGGGGACAGGTTCGGGCCAGCAGACCTGGCTCTCTCATTGGCCACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR CCA 90 bp | CTCCCCCGCCTCTCCTCCCACTACAGGGGAGGAGGGTCTGCCCGGCTTGGCTTCACCGCAGGACGTGCTTaGACAGTGACAATGACCTTC | + |
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Preference number: 4 (lower is better) Translates to: LPRLSSHYRGGGSARLGFTAGRA*TVTMTF Trigger: GAAGGTCATTGTCACTGTCCAAGCACGTCCTGCGGT...GAAGCCAAGCCGGGCAGACCCTCCTCCCCTGTAGTGGGAGGAGAGGCGGGGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR TCA 90 bp | AGGTGGCCAATGAGAGAGCCAGGTCTGCTGGCCCGAACCTGTCCCCAGCTGCGGTGCCCAGGCCTTGGTTaGTGGTGCTGTGGAATGACT | + |
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Preference number: 4 (lower is better) Translates to: RWPMREPGLLARTCPQLRCPGLG*WCCGMT Trigger: AGTCATTCCACAGCACCATCAACCAAGGCCTGGGCA...CCGCAGCTGGGGACAGGTTCGGGCCAGCAGACCTGGCTCTCTCATTGGCCACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR CCA 90 bp | CCCGCCTCTCCTCCCACTACAGGGGAGGAGGGTCTGCCCGGCTTGGCTTCTCAGAGGTACATGACCTCCTaGCCATCCCCGTTGATCCTT | + |
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Preference number: 4 (lower is better) Translates to: PASPPTTGEEGLPGLASQRYMTS*PSPLIL Trigger: AAGGATCAACGGGGATGGCCAGGAGGTCATGTACCT...CTGAGAAGCCAAGCCGGGCAGACCCTCCTCCCCTGTAGTGGGAGGAGAGGCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
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| CDS-3UTR GCA 90 bp | AGGTGGCCAATGAGAGAGCCAGGTCTGCTGGCCCGAACCTGTCCCCAGCTGCGGGCAGATGGGGGAGGTTaGCATGACCTATCCTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: RWPMREPGLLARTCPQLRADGGG*HDLSSC Trigger: ACAAGAGGATAGGTCATGGCAACCTCCCCCATCTGC...CCGCAGCTGGGGACAGGTTCGGGCCAGCAGACCTGGCTCTCTCATTGGCCACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
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| CDS-3UTR GCA 90 bp | CCCGCCTCTCCTCCCACTACAGGGGAGGAGGGTCTGCCCGGCTTGGCTTCTCAGTCAGCACCACATCGTTaGCCTTTGACATGTGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: PASPPTTGEEGLPGLASQSAPHR*PLTCGL Trigger: AAGGCCACATGTCAAAGGGCAACGATGTGGTGCTGA...CTGAGAAGCCAAGCCGGGCAGACCCTCCTCCCCTGTAGTGGGAGGAGAGGCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR GCA 90 bp | CATCTGGGTTGTACCTCTGCGGTTCTGGGATACCGACAGCTCTCCTCTCCCTTCGAGCGGCTGACGTTCTaGGTCGGGTACCCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: HLGCTSAVLGYRQLSSPFERLTF*VGYPRR Trigger: CCTCCTGGGGTACCCGACGCAGAACGTCAGCCGCTC...GAAGGGAGAGGAGAGCTGTCGGTATCCCAGAACCGCAGAGGTACAACCCAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR CCA 90 bp | GTGCTAACACTGTTGCCTTGGAGCTCAGATCTCACACACAGAGCAATTCAGCCCGGGTACCCCAGGAGGTaGGTGACGCGGCTGCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: VLTLLPWSSDLTHRAIQPGYPRR*VTRLPR Trigger: GCGCGGCAGCCGCGTCACCCACCTCCTGGGGTACCC...GGGCTGAATTGCTCTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR TCA 90 bp | AATTTCCTTACCACCGCTAGGTGGCCAATGAGAGAGCCAGGTCTGCTGGCCCGAGTGGAAGCTGTGCTGTaGGTGGTAAGCCCCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: NFLTTARWPMREPGLLARVEAVL*VVSPSS Trigger: CGAGCTGGGGCTTACCACTCACAGCACAGCTTCCAC...TCGGGCCAGCAGACCTGGCTCTCTCATTGGCCACCTAGCGGTGGTAAGGAAATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR TCA 90 bp | CCTCCCACTACAGGGGAGGAGGGTCTGCCCGGCTTGGCTTCTCAGAGGGAAATTTGCCCAGGCCTTGGTTaGTGGTGCTGTGGAATGACT | + |
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Preference number: 4 (lower is better) Translates to: PPTTGEEGLPGLASQREICPGLG*WCCGMT Trigger: AGTCATTCCACAGCACCATCAACCAAGGCCTGGGCA...AATTTCCCTCTGAGAAGCCAAGCCGGGCAGACCCTCCTCCCCTGTAGTGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR GCA 90 bp | GGGGCCCTCGCCTTGGCTGGGGACATCTGGGTTGTACCTCTGCGGTTCTGGGATTCAGCACCACATCGTTaGCCTTTGACATGTGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GALALAGDIWVVPLRFWDSAPHR*PLTCGL Trigger: AAGGCCACATGTCAAAGGGCAACGATGTGGTGCTGA...ATCCCAGAACCGCAGAGGTACAACCCAGATGTCCCCAGCCAAGGCGAGGGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR TCA 90 bp | CCTCCCACTACAGGGGAGGAGGGTCTGCCCGGCTTGGCTTCTCAGAGGGAAATTTACTCGCTGGGAGTCTaGGACTTTCACCTCTACCAC | + |
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Preference number: 4 (lower is better) Translates to: PPTTGEEGLPGLASQREIYSLGV*DFHLYH Trigger: GTGGTAGAGGTGAAAGTCTCAGACTCCCAGCGAGTA...AATTTCCCTCTGAGAAGCCAAGCCGGGCAGACCCTCCTCCCCTGTAGTGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR GCA 90 bp | GGGGCCCTCGCCTTGGCTGGGGACATCTGGGTTGTACCTCTGCGGTTCTGGGATGGCTCTGAGTTGACTTaGATCCACTCAATGTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: GALALAGDIWVVPLRFWDGSELT*IHSMSR Trigger: TCTGGACATTGAGTGGATGCAAGTCAACTCAGAGCC...ATCCCAGAACCGCAGAGGTACAACCCAGATGTCCCCAGCCAAGGCGAGGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
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| CDS-3UTR GCA 90 bp | CCTCCCACTACAGGGGAGGAGGGTCTGCCCGGCTTGGCTTCTCAGAGGGAAATTCATGGTTGGCCACTGTaGACTGATACAGCCCATCGT | + |
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Preference number: 4 (lower is better) Translates to: PPTTGEEGLPGLASQREIHGWPL*TDTAHR Trigger: ACGATGGGCTGTATCAGTGCACAGTGGCCAACCATG...AATTTCCCTCTGAGAAGCCAAGCCGGGCAGACCCTCCTCCCCTGTAGTGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR TCA 90 bp | CATCTGGGTTGTACCTCTGCGGTTCTGGGATACCGACAGCTCTCCTCTCCCTTCCCTGGCCATCCCCGTTaGTCCTTACAGCAGACAACA | + |
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Preference number: 4 (lower is better) Translates to: HLGCTSAVLGYRQLSSPFPGHPR*SLQQTT Trigger: TGTTGTCTGCTGTAAGGATCAACGGGGATGGCCAGG...GAAGGGAGAGGAGAGCTGTCGGTATCCCAGAACCGCAGAGGTACAACCCAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
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| CDS-3UTR TCA 90 bp | GAGGAGGGTCTGCCCGGCTTGGCTTCTCAGAGGGAAATTTCCTTACCACCGCTACACATCGTTGCCCTTTaGCATGTGGCCTTCCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: EEGLPGLASQREISLPPLHIVAL*HVAFRP Trigger: TGGACGGAAGGCCACATGTCAAAGGGCAACGATGTG...TAGCGGTGGTAAGGAAATTTCCCTCTGAGAAGCCAAGCCGGGCAGACCCTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR TCA 90 bp | AATTTCCTTACCACCGCTAGGTGGCCAATGAGAGAGCCAGGTCTGCTGGCCCGACACATCGTTGCCCTTTaGCATGTGGCCTTCCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: NFLTTARWPMREPGLLARHIVAL*HVAFRP Trigger: TGGACGGAAGGCCACATGTCAAAGGGCAACGATGTG...TCGGGCCAGCAGACCTGGCTCTCTCATTGGCCACCTAGCGGTGGTAAGGAAATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR TCA 90 bp | CCTCCCACTACAGGGGAGGAGGGTCTGCCCGGCTTGGCTTCTCAGAGGGAAATTGATGGTGCTGTGGAATaGCTCTTGGTAAGAAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: PPTTGEEGLPGLASQREIDGAVE*LLVRKL Trigger: GAGCTTTCTTACCAAGAGTCATTCCACAGCACCATC...AATTTCCCTCTGAGAAGCCAAGCCGGGCAGACCCTCCTCCCCTGTAGTGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR TCA 90 bp | CATCTGGGTTGTACCTCTGCGGTTCTGGGATACCGACAGCTCTCCTCTCCCTTCTACTCGCTGGGAGTCTaGGACTTTCACCTCTACCAC | + |
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Preference number: 4 (lower is better) Translates to: HLGCTSAVLGYRQLSSPFYSLGV*DFHLYH Trigger: GTGGTAGAGGTGAAAGTCTCAGACTCCCAGCGAGTA...GAAGGGAGAGGAGAGCTGTCGGTATCCCAGAACCGCAGAGGTACAACCCAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR CCA 90 bp | CCTTCCTCTCCCTGGAAACCAGGGGTGAGGGAGAGCTCTGAACTGTTTTCTGTCGCTGAGAGCCTCCGTTaGCAAAGCACTTCAGCACCA | + |
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Preference number: 4 (lower is better) Translates to: PSSPWKPGVRESSELFSVAESLR*QSTSAP Trigger: TGGTGCTGAAGTGCTTTGCCAACGGAGGCTCTCAGC...GACAGAAAACAGTTCAGAGCTCTCCCTCACCCCTGGTTTCCAGGGAGAGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR CCA 90 bp | AAGTTTCTTTATTGTGCTAACACTGTTGCCTTGGAGCTCAGATCTCACACACAGGGGTACCCCAGGAGGTaGGTGACGCGGCTGCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: KFLYCANTVALELRSHTQGYPRR*VTRLPR Trigger: GCGCGGCAGCCGCGTCACCCACCTCCTGGGGTACCC...CTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAAGAAACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR TCA 90 bp | TTTATTGTGCTAACACTGTTGCCTTGGAGCTCAGATCTCACACACAGAGCAATTGGCGCAGGGAGCGGCTaGCGTTCTGCGTCGGGTACC | + |
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Preference number: 4 (lower is better) Translates to: FIVLTLLPWSSDLTHRAIGAGSG*RSASGT Trigger: GGTACCCGACGCAGAACGTCAGCCGCTCCCTGCGCC...AATTGCTCTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR GCA 90 bp | CCTTCCTCTCCCTGGAAACCAGGGGTGAGGGAGAGCTCTGAACTGTTTTCTGTCCATGGTTGGCCACTGTaGACTGATACAGCCCATCGT | + |
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Preference number: 4 (lower is better) Translates to: PSSPWKPGVRESSELFSVHGWPL*TDTAHR Trigger: ACGATGGGCTGTATCAGTGCACAGTGGCCAACCATG...GACAGAAAACAGTTCAGAGCTCTCCCTCACCCCTGGTTTCCAGGGAGAGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR TCA 90 bp | ATCTGGGTTGTACCTCTGCGGTTCTGGGATACCGACAGCTCTCCTCTCCCTTCCGATGGTGCTGTGGAATaGCTCTTGGTAAGAAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: IWVVPLRFWDTDSSPLPSDGAVE*LLVRKL Trigger: GAGCTTTCTTACCAAGAGTCATTCCACAGCACCATC...GGAAGGGAGAGGAGAGCTGTCGGTATCCCAGAACCGCAGAGGTACAACCCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR TCA 90 bp | GTGCTAACACTGTTGCCTTGGAGCTCAGATCTCACACACAGAGCAATTCAGCCCTTGGCCACTGTGCACTaGTACAGCCCATCGTCGTCT | + |
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Preference number: 4 (lower is better) Translates to: VLTLLPWSSDLTHRAIQPLATVH*YSPSSS Trigger: AGACGACGATGGGCTGTATCAGTGCACAGTGGCCAA...GGGCTGAATTGCTCTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR GCA 90 bp | CTCCCTTCCTCTCCCTGGAAACCAGGGGTGAGGGAGAGCTCTGAACTGTTTTCTGCTGTGTCAGATACCTaGAGGTTCATGAGGTTGATG | + |
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Preference number: 4 (lower is better) Translates to: LPSSPWKPGVRESSELFSAVSDT*RFMRLM Trigger: CATCAACCTCATGAACCTGCAGGTATCTGACACAGC...AGAAAACAGTTCAGAGCTCTCCCTCACCCCTGGTTTCCAGGGAGAGGAAGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
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| CDS-3UTR GCA 90 bp | GTGCTAACACTGTTGCCTTGGAGCTCAGATCTCACACACAGAGCAATTCAGCCCCCGGCACTCATAGGTTaGTGTGTCAGATACCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: VLTLLPWSSDLTHRAIQPPALIG*CVRYLQ Trigger: CTGCAGGTATCTGACACAGCAACCTATGAGTGCCGG...GGGCTGAATTGCTCTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR GCA 90 bp | TTTATTGTGCTAACACTGTTGCCTTGGAGCTCAGATCTCACACACAGAGCAATTGAGCGGCTGACGTTCTaGGTCGGGTACCCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: FIVLTLLPWSSDLTHRAIERLTF*VGYPRR Trigger: CCTCCTGGGGTACCCGACGCAGAACGTCAGCCGCTC...AATTGCTCTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTGTGCTAACACTGTTGCCTTGGAGCTCAGATCTCACACACAGAGCAATGTGGAAGCTGTGCTGTaGGTGGTAAGCCCCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LYCANTVALELRSHTQSNVEAVL*VVSPSS Trigger: CGAGCTGGGGCTTACCACTCACAGCACAGCTTCCAC...ATTGCTCTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
||
| CDS-3UTR TCA 90 bp | AAGTTTCTTTATTGTGCTAACACTGTTGCCTTGGAGCTCAGATCTCACACACAGCGCAGCAGCAGCAGATaGGCCCCCAGATGCCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KFLYCANTVALELRSHTQRSSSR*APRCLV Trigger: CACTAGGCATCTGGGGGCTCATCTGCTGCTGCTGCG...CTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAAGAAACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
||
| CDS-3UTR CCA 90 bp | CTTTATTGTGCTAACACTGTTGCCTTGGAGCTCAGATCTCACACACAGAGCAATCCTTCCTGGTGGCCATaGTGGTCTTCTTCACCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LYCANTVALELRSHTQSNPSWWP*WSSSPG Trigger: GCCGGGTGAAGAAGACCACCATGGCCACCAGGAAGG...ATTGCTCTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
||
| CDS-3UTR CCA 90 bp | GTGCTAACACTGTTGCCTTGGAGCTCAGATCTCACACACAGAGCAATTCAGCCCATCATGCCTACTCGCTaGGAGTCTGAGACTTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VLTLLPWSSDLTHRAIQPIMPTR*ESETFT Trigger: GGTGAAAGTCTCAGACTCCCAGCGAGTAGGCATGAT...GGGCTGAATTGCTCTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR TCA 90 bp | TTTATTGTGCTAACACTGTTGCCTTGGAGCTCAGATCTCACACACAGAGCAATTCTTCTGCCAGGTACATaGCCTCCTGGCCATCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: FIVLTLLPWSSDLTHRAILLPGT*PPGHPR Trigger: ACGGGGATGGCCAGGAGGTCATGTACCTGGCAGAAG...AATTGCTCTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
||
| CDS-3UTR GCA 90 bp | TTTATTGTGCTAACACTGTTGCCTTGGAGCTCAGATCTCACACACAGAGCAATTGCAAAGCGGACCCTCTaGTGCAGATGGGGGAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FIVLTLLPWSSDLTHRAIAKRTL*CRWGRL Trigger: CAACCTCCCCCATCTGCAGCAGAGGGTCCGCTTTGC...AATTGCTCTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
||
| CDS-3UTR CCA 90 bp | TTTATTGTGCTAACACTGTTGCCTTGGAGCTCAGATCTCACACACAGAGCAATTAGGCATCGTACTGGCTaGGGTCTGAGGCTGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FIVLTLLPWSSDLTHRAIRHRTG*GLRLQS Trigger: GCTTTGCAGCCTCAGACCCCAGCCAGTACGATGCCT...AATTGCTCTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
||
| CDS-3UTR TCA 90 bp | AAGTTTCTTTATTGTGCTAACACTGTTGCCTTGGAGCTCAGATCTCACACACAGTTGGCCACTGTGCACTaGTACAGCCCATCGTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KFLYCANTVALELRSHTQLATVH*YSPSSS Trigger: AGACGACGATGGGCTGTATCAGTGCACAGTGGCCAA...CTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAAGAAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR GCA 90 bp | TCAGTCTTTAAGTTTCTTTATTGTGCTAACACTGTTGCCTTGGAGCTCAGATCTAAGCGGACCCTCTGCTaGAGATGGGGGAGGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVFKFLYCANTVALELRSKRTLC*RWGRLP Trigger: TGGCAACCTCCCCCATCTGCAGCAGAGGGTCCGCTT...AGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAAGAAACTTAAAGACTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
||
| CDS-3UTR CCA 90 bp | AAGTTTCTTTATTGTGCTAACACTGTTGCCTTGGAGCTCAGATCTCACACACAGGCTGAGAGCCTCCGTTaGCAAAGCACTTCAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KFLYCANTVALELRSHTQAESLR*QSTSAP Trigger: TGGTGCTGAAGTGCTTTGCCAACGGAGGCTCTCAGC...CTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAAGAAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
||
| CDS-3UTR GCA 90 bp | TCAGTCTTTAAGTTTCTTTATTGTGCTAACACTGTTGCCTTGGAGCTCAGATCTCCGGCACTCATAGGTTaGTGTGTCAGATACCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVFKFLYCANTVALELRSPALIG*CVRYLQ Trigger: CTGCAGGTATCTGACACAGCAACCTATGAGTGCCGG...AGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAAGAAACTTAAAGACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
||
| CDS-3UTR CCA 90 bp | CTTTATTGTGCTAACACTGTTGCCTTGGAGCTCAGATCTCACACACAGAGCAATCAATGTCCAGACTGTTaGTACCCAAATCCTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LYCANTVALELRSHTQSNQCPDC*YPNPQD Trigger: ATCCTGAGGATTTGGGTACCAACAGTCTGGACATTG...ATTGCTCTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
||
| CDS-3UTR CCA 90 bp | TCAGTCTTTAAGTTTCTTTATTGTGCTAACACTGTTGCCTTGGAGCTCAGATCTATCATGCCTACTCGCTaGGAGTCTGAGACTTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SVFKFLYCANTVALELRSIMPTR*ESETFT Trigger: GGTGAAAGTCTCAGACTCCCAGCGAGTAGGCATGAT...AGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAAGAAACTTAAAGACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
||
| 3UTR CAA 72 bp | GTCTTTAAGTTTCTTTATTGTGCTAACACTGTTGCCTaGGAGCTCAGATCTCACACACAGAGCAATTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VFKFLYCANTVA*ELRSHTQSNSA Trigger: GGCTGAATTGCTCTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAAGAAACTTAAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
||
| CDS GCA 90 bp | CAGGGCGGAGGCGCGTACTTGCGGCGCAGGGAGCGGCTGACGTTCTaGGTCGGGTACCCCAGGAGGTGGGTGACGCGGCTGCCGCGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QGGGAYLRRRERLTF*VGYPRRWVTRLPRP Trigger: CGGGCGCGGCAGCCGCGTCACCCACCTCCTGGGGTACCCGACGCAGAACGTCAGCCGCTCCCTGCGCCGCAAGTACGCGCCTCCGCCCTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR CAA 90 bp | CCTTCCTCTCCCTGGAAACCAGGGGTGAGGGAGAGCTCTGAACTGTTTTCTGTCGGCGGAGGCGCGTACTaGCGGCGCAGGGAGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSSPWKPGVRESSELFSVGGGAY*RRRERL Trigger: CAGCCGCTCCCTGCGCCGCAAGTACGCGCCTCCGCC...GACAGAAAACAGTTCAGAGCTCTCCCTCACCCCTGGTTTCCAGGGAGAGGAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
||
| CDS-3UTR CAA 90 bp | CCCGCCTCTCCTCCCACTACAGGGGAGGAGGGTCTGCCCGGCTTGGCTTCTCAGCAGCCTAGCCTCACATaGTCACCTTCTGCCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PASPPTTGEEGLPGLASQQPSLT*SPSARY Trigger: GTACCTGGCAGAAGGTGACAATGTGAGGCTAGGCTG...CTGAGAAGCCAAGCCGGGCAGACCCTCCTCCCCTGTAGTGGGAGGAGAGGCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
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| CDS-3UTR CAA 90 bp | TGGCCAATGAGAGAGCCAGGTCTGCTGGCCCGAACCTGTCCCCAGCTGCGGGCACCATCGTCGTCTGCGTaGATGCCCTTCAACAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WPMREPGLLARTCPQLRAPSSSA*MPFNSR Trigger: CCTGCTGTTGAAGGGCATCAACGCAGACGACGATGG...TGCCCGCAGCTGGGGACAGGTTCGGGCCAGCAGACCTGGCTCTCTCATTGGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS TCA 90 bp | CTGCAGGTTCATGAGGTTGATGGAGGCATCGTACTGGCTGGGGTCTaGGGCTGCAAAGCGGACCCTCTGCTGCAGATGGGGGAGGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LQVHEVDGGIVLAGV*GCKADPLLQMGEVA Trigger: GGCAACCTCCCCCATCTGCAGCAGAGGGTCCGCTTTGCAGCCTCAGACCCCAGCCAGTACGATGCCTCCATCAACCTCATGAACCTGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
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| CDS GCA 90 bp | GGGGCTGAGAGCCTCCGTTGGCAAAGCACTTCAGCACCACATCGTTaGCCTTTGACATGTGGCCTTCCGTCCAACACATGGGCACCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GAESLRWQSTSAPHR*PLTCGLPSNTWAPQ Trigger: CTGCGGTGCCCATGTGTTGGACGGAAGGCCACATGTCAAAGGGCAACGATGTGGTGCTGAAGTGCTTTGCCAACGGAGGCTCTCAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
||
| CDS-3UTR CAA 90 bp | GGGGCCCTCGCCTTGGCTGGGGACATCTGGGTTGTACCTCTGCGGTTCTGGGATTTCAGCACCACATCGTaGCCCTTTGACATGTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GALALAGDIWVVPLRFWDFSTTS*PFDMWP Trigger: AGGCCACATGTCAAAGGGCAACGATGTGGTGCTGAA...ATCCCAGAACCGCAGAGGTACAACCCAGATGTCCCCAGCCAAGGCGAGGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS TCA 90 bp | AGAGCCTCCGTTGGCAAAGCACTTCAGCACCACATCGTTGCCCTTTaGCATGTGGCCTTCCGTCCAACACATGGGCACCGCAGGACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RASVGKALQHHIVAL*HVAFRPTHGHRRTC Trigger: GCACGTCCTGCGGTGCCCATGTGTTGGACGGAAGGCCACATGTCAAAGGGCAACGATGTGGTGCTGAAGTGCTTTGCCAACGGAGGCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS CCA 90 bp | GTGTCAGATACCTGCAGGTTCATGAGGTTGATGGAGGCATCGTACTaGCTGGGGTCTGAGGCTGCAAAGCGGACCCTCTGCTGCAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: VSDTCRFMRLMEASY*LGSEAAKRTLCCRW Trigger: CCATCTGCAGCAGAGGGTCCGCTTTGCAGCCTCAGACCCCAGCCAGTACGATGCCTCCATCAACCTCATGAACCTGCAGGTATCTGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
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| CDS CCA 90 bp | CCGTTGGCAAAGCACTTCAGCACCACATCGTTGCCCTTTGACATGTaGCCTTCCGTCCAACACATGGGCACCGCAGGACGTGCTTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: PLAKHFSTTSLPFDM*PSVQHMGTAGRAWT Trigger: TGTCCAAGCACGTCCTGCGGTGCCCATGTGTTGGACGGAAGGCCACATGTCAAAGGGCAACGATGTGGTGCTGAAGTGCTTTGCCAACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR CAA 90 bp | GAGGAGGGTCTGCCCGGCTTGGCTTCTCAGAGGGAAATTTCCTTACCACCGCTACCACATCGTTGCCCTTaGACATGTGGCCTTCCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EEGLPGLASQREISLPPLPHRCP*TCGLPS Trigger: GGACGGAAGGCCACATGTCAAAGGGCAACGATGTGG...TAGCGGTGGTAAGGAAATTTCCCTCTGAGAAGCCAAGCCGGGCAGACCCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR CAA 90 bp | CTCCCTTCCTCTCCCTGGAAACCAGGGGTGAGGGAGAGCTCTGAACTGTTTTCTCCACATCGTTGCCCTTaGACATGTGGCCTTCCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPSSPWKPGVRESSELFSPHRCP*TCGLPS Trigger: GGACGGAAGGCCACATGTCAAAGGGCAACGATGTGG...AGAAAACAGTTCAGAGCTCTCCCTCACCCCTGGTTTCCAGGGAGAGGAAGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS TCA 90 bp | AGAGCCCAGCACTGCTCCAACGATCATGCCTACTCGCTGGGAGTCTaGGACTTTCACCTCTACCACACAGACGCTGTAGCCCACATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RAQHCSNDHAYSLGV*DFHLYHTDAVAHMV Trigger: AACCATGTGGGCTACAGCGTCTGTGTGGTAGAGGTGAAAGTCTCAGACTCCCAGCGAGTAGGCATGATCGTTGGAGCAGTGCTGGGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR CAA 90 bp | CCTCCCACTACAGGGGAGGAGGGTCTGCCCGGCTTGGCTTCTCAGAGGGAAATTTCAATGTCCAGACTGTaGGTACCCAAATCCTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PPTTGEEGLPGLASQREISMSRL*VPKSSG Trigger: TCCTGAGGATTTGGGTACCAACAGTCTGGACATTGA...AATTTCCCTCTGAGAAGCCAAGCCGGGCAGACCCTCCTCCCCTGTAGTGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
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| CDS-3UTR CAA 90 bp | CCTTCCTCTCCCTGGAAACCAGGGGTGAGGGAGAGCTCTGAACTGTTTTCTGTCCCCGGCACTCATAGGTaGCTGTGTCAGATACCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSSPWKPGVRESSELFSVPGTHR*LCQIPA Trigger: TGCAGGTATCTGACACAGCAACCTATGAGTGCCGGG...GACAGAAAACAGTTCAGAGCTCTCCCTCACCCCTGGTTTCCAGGGAGAGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS GCA 90 bp | CTTCCTGGTGGCCATGGTGGTCTTCTTCACCCGGCACTCATAGGTTaGTGTGTCAGATACCTGCAGGTTCATGAGGTTGATGGAGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: LPGGHGGLLHPALIG*CVRYLQVHEVDGGI Trigger: GATGCCTCCATCAACCTCATGAACCTGCAGGTATCTGACACAGCAACCTATGAGTGCCGGGTGAAGAAGACCACCATGGCCACCAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
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| CDS-3UTR CAA 90 bp | ATCTGGGTTGTACCTCTGCGGTTCTGGGATACCGACAGCTCTCCTCTCCCTTCCTGTGAGGGCTCTGAGTaGACTTGCATCCACTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: IWVVPLRFWDTDSSPLPSCEGSE*TCIHSM Trigger: CATTGAGTGGATGCAAGTCAACTCAGAGCCCTCACA...GGAAGGGAGAGGAGAGCTGTCGGTATCCCAGAACCGCAGAGGTACAACCCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
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| CDS-3UTR CAA 90 bp | CCTTCCTCTCCCTGGAAACCAGGGGTGAGGGAGAGCTCTGAACTGTTTTCTGTCTTCAGCACCACATCGTaGCCCTTTGACATGTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PSSPWKPGVRESSELFSVFSTTS*PFDMWP Trigger: AGGCCACATGTCAAAGGGCAACGATGTGGTGCTGAA...GACAGAAAACAGTTCAGAGCTCTCCCTCACCCCTGGTTTCCAGGGAGAGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR CAA 90 bp | TCAGTCTTTAAGTTTCTTTATTGTGCTAACACTGTTGCCTTGGAGCTCAGATCTGGCGGAGGCGCGTACTaGCGGCGCAGGGAGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SVFKFLYCANTVALELRSGGGAY*RRRERL Trigger: CAGCCGCTCCCTGCGCCGCAAGTACGCGCCTCCGCC...AGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAAGAAACTTAAAGACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
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| CDS-3UTR CAA 90 bp | CTTTATTGTGCTAACACTGTTGCCTTGGAGCTCAGATCTCACACACAGAGCAATCCATCGTCGTCTGCGTaGATGCCCTTCAACAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LYCANTVALELRSHTQSNPSSSA*MPFNSR Trigger: CCTGCTGTTGAAGGGCATCAACGCAGACGACGATGG...ATTGCTCTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS-3UTR CAA 90 bp | TTTATTGTGCTAACACTGTTGCCTTGGAGCTCAGATCTCACACACAGAGCAATTTGCAGGTTCATGAGGTaGATGGAGGCATCGTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: FIVLTLLPWSSDLTHRAICRFMR*MEASYW Trigger: CCAGTACGATGCCTCCATCAACCTCATGAACCTGCA...AATTGCTCTGTGTGTGAGATCTGAGCTCCAAGGCAACAGTGTTAGCACAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
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| CDS CAA 72 bp | ACGTCCTCGGGGCCGCCGCAGGGCGGAGGCGCGTACTaGCGGCGCAGGGAGCGGCTGACGTTCTGCGTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: TSSGPPQGGGAY*RRRERLTFCVG Trigger: CCCGACGCAGAACGTCAGCCGCTCCCTGCGCCGCAAGTACGCGCCTCCGCCCTGCGGCGGCCCCGAGGACGT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS CAA 90 bp | ACTAGGGCCACGTCCTCGGGGCCGCCGCAGGGCGGAGGCGCGTACTaGCGGCGCAGGGAGCGGCTGACGTTCTGCGTCGGGTACCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TRATSSGPPQGGGAY*RRRERLTFCVGYPR Trigger: CCTGGGGTACCCGACGCAGAACGTCAGCCGCTCCCTGCGCCGCAAGTACGCGCCTCCGCCCTGCGGCGGCCCCGAGGACGTGGCCCTAGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS GCA 72 bp | GGCGCGTACTTGCGGCGCAGGGAGCGGCTGACGTTCTaGGTCGGGTACCCCAGGAGGTGGGTGACGCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GAYLRRRERLTF*VGYPRRWVTRL Trigger: CAGCCGCGTCACCCACCTCCTGGGGTACCCGACGCAGAACGTCAGCCGCTCCCTGCGCCGCAAGTACGCGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS CCA 72 bp | ACTAAGAGGCCGTCCTTGCACGAGCGCTGCTCGACCTaGGCACAGTCGGCGCAGTCGGCCGGCTCCGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TKRPSLHERCST*AQSAQSAGSAL Trigger: GAGCGCGGAGCCGGCCGACTGCGCCGACTGTGCCCAGGTCGAGCAGCGCTCGTGCAAGGACGGCCTCTTAGT 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
||
| CDS TCA 72 bp | CATGAGGTTGATGGAGGCATCGTACTGGCTGGGGTCTaGGGCTGCAAAGCGGACCCTCTGCTGCAGATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: HEVDGGIVLAGV*GCKADPLLQMG Trigger: CCCCATCTGCAGCAGAGGGTCCGCTTTGCAGCCTCAGACCCCAGCCAGTACGATGCCTCCATCAACCTCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
||
| CDS CCA 72 bp | ACCTGCAGGTTCATGAGGTTGATGGAGGCATCGTACTaGCTGGGGTCTGAGGCTGCAAAGCGGACCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TCRFMRLMEASY*LGSEAAKRTLC Trigger: GCAGAGGGTCCGCTTTGCAGCCTCAGACCCCAGCCAGTACGATGCCTCCATCAACCTCATGAACCTGCAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
||
| CDS CAA 90 bp | GAGAGCCTCCGTTGGCAAAGCACTTCAGCACCACATCGTTGCCCTTaGACATGTGGCCTTCCGTCCAACACATGGGCACCGCAGGACGTG | + |
|
Preference number: 6 (lower is better) Translates to: ESLRWQSTSAPHRCP*TCGLPSNTWAPQDV Trigger: CACGTCCTGCGGTGCCCATGTGTTGGACGGAAGGCCACATGTCAAAGGGCAACGATGTGGTGCTGAAGTGCTTTGCCAACGGAGGCTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
||
| CDS GCA 72 bp | GTTGGCCACTGTGCACTGATACAGCCCATCGTCGTCTaGGTTGATGCCCTTCAACAGCAGGTCTCCGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VGHCALIQPIVV*VDALQQQVSVA Trigger: GGCAACGGAGACCTGCTGTTGAAGGGCATCAACGCAGACGACGATGGGCTGTATCAGTGCACAGTGGCCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
||
| CDS CAA 72 bp | CCTTCTGCCAGGTACATGACCTCCTGGCCATCCCCGTaGATCCTTACAGCAGACAACAGTGCTGGGCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSARYMTSWPSP*ILTADNSAGLR Trigger: CCTGAGCCCAGCACTGTTGTCTGCTGTAAGGATCAACGGGGATGGCCAGGAGGTCATGTACCTGGCAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
||
| CDS CCA 72 bp | AAGCACTTCAGCACCACATCGTTGCCCTTTGACATGTaGCCTTCCGTCCAACACATGGGCACCGCAGGACGT | + |
|
Preference number: 6 (lower is better) Translates to: KHFSTTSLPFDM*PSVQHMGTAGR Trigger: ACGTCCTGCGGTGCCCATGTGTTGGACGGAAGGCCACATGTCAAAGGGCAACGATGTGGTGCTGAAGTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
||
| CDS CAA 72 bp | CGTTGGCAAAGCACTTCAGCACCACATCGTTGCCCTTaGACATGTGGCCTTCCGTCCAACACATGGGCACCG | + |
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Preference number: 6 (lower is better) Translates to: RWQSTSAPHRCP*TCGLPSNTWAP Trigger: CGGTGCCCATGTGTTGGACGGAAGGCCACATGTCAAAGGGCAACGATGTGGTGCTGAAGTGCTTTGCCAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS TCA 72 bp | CTCTTGGTAAGAAAGCTCAGAGTGGAAGCTGTGCTGTaGGTGGTAAGCCCCAGCTCGGTAGGGGTGACTGTG | + |
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Preference number: 6 (lower is better) Translates to: LLVRKLRVEAVL*VVSPSSVGVTV Trigger: CACAGTCACCCCTACCGAGCTGGGGCTTACCACTCACAGCACAGCTTCCACTCTGAGCTTTCTTACCAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS TCA 72 bp | CACTGCTCCAACGATCATGCCTACTCGCTGGGAGTCTaGGACTTTCACCTCTACCACACAGACGCTGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: HCSNDHAYSLGV*DFHLYHTDAVA Trigger: GGCTACAGCGTCTGTGTGGTAGAGGTGAAAGTCTCAGACTCCCAGCGAGTAGGCATGATCGTTGGAGCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS GCA 72 bp | AGCCTCCGTTGGCAAAGCACTTCAGCACCACATCGTTaGCCTTTGACATGTGGCCTTCCGTCCAACACATGG | + |
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Preference number: 6 (lower is better) Translates to: SLRWQSTSAPHR*PLTCGLPSNTW Trigger: CCATGTGTTGGACGGAAGGCCACATGTCAAAGGGCAACGATGTGGTGCTGAAGTGCTTTGCCAACGGAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS CAA 72 bp | GAGCCTCCGTTGGCAAAGCACTTCAGCACCACATCGTaGCCCTTTGACATGTGGCCTTCCGTCCAACACATG | + |
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Preference number: 6 (lower is better) Translates to: EPPLAKHFSTTS*PFDMWPSVQHM Trigger: CATGTGTTGGACGGAAGGCCACATGTCAAAGGGCAACGATGTGGTGCTGAAGTGCTTTGCCAACGGAGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS TCA 72 bp | TCCGTTGCCCAGGCCTTGGTTGATGGTGCTGTGGAATaGCTCTTGGTAAGAAAGCTCAGAGTGGAAGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SVAQALVDGAVE*LLVRKLRVEAV Trigger: CACAGCTTCCACTCTGAGCTTTCTTACCAAGAGTCATTCCACAGCACCATCAACCAAGGCCTGGGCAACGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061835.10 ENSMUST00000177086.2 |
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| CDS GCA 72 bp | GGCCATGGTGGTCTTCTTCACCCGGCACTCATAGGTTaGTGTGTCAGATACCTGCAGGTTCATGAGGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: GHGGLLHPALIG*CVRYLQVHEVD Trigger: ATCAACCTCATGAACCTGCAGGTATCTGACACAGCAACCTATGAGTGCCGGGTGAAGAAGACCACCATGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
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| CDS GCA 72 bp | AAAACATTCTCCCTGTGTGAGGGCTCTGAGTTGACTTaGATCCACTCAATGTCCAGACTGTTGGTACCCAAA | + |
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Preference number: 6 (lower is better) Translates to: KTFSLCEGSELT*IHSMSRLLVPK Trigger: TTTGGGTACCAACAGTCTGGACATTGAGTGGATGCAAGTCAACTCAGAGCCCTCACACAGGGAGAATGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
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| CDS CAA 72 bp | GTAAGAAAAACATTCTCCCTGTGTGAGGGCTCTGAGTaGACTTGCATCCACTCAATGTCCAGACTGTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: VRKTFSLCEGSE*TCIHSMSRLLV Trigger: TACCAACAGTCTGGACATTGAGTGGATGCAAGTCAACTCAGAGCCCTCACACAGGGAGAATGTTTTTCTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061835.10 |
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