Pregenerated sensors for VSIG10L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070604Ensembl transcript IDs: ENSMUST00000107977.4, ENSMUST00000203042.2, ENSMUST00000203769.2
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCAAGGACGATGCCAGCGATGGCCCCTGGACTCAGGTCAGAGCCTaGCTGGTAGACTCGGCTTTGGGATGGGGTCCCTGGCAGAGACCC | + |
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Preference number: 1 (lower is better) Translates to: AKDDASDGPWTQVRA*LVDSALGWGPWQRP Trigger: GGGTCTCTGCCAGGGACCCCATCCCAAAGCCGAGTCTACCAGGCAGGCTCTGACCTGAGTCCAGGGGCCATCGCTGGCATCGTCCTTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
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| 3UTR GCA 90 bp | GAAGGCCAGCCAGCAGCGCCAAGCCCAATAGGGAGCCAAGGACGATaGCAGCGATGGCCCCTGGACTCAGGTCAGAGCCTGCCTGGTAGA | + |
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Preference number: 1 (lower is better) Translates to: EGQPAAPSPIGSQGR*QRWPLDSGQSLPGR Trigger: TCTACCAGGCAGGCTCTGACCTGAGTCCAGGGGCCATCGCTGGCATCGTCCTTGGCTCCCTATTGGGCTTGGCGCTGCTGGCTGGCCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
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| 3UTR CCA 90 bp | CCAGCAGCGCCAAGCCCAATAGGGAGCCAAGGACGATGCCAGCGATaGCCCCTGGACTCAGGTCAGAGCCTGCCTGGTAGACTCGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: PAAPSPIGSQGRCQR*PLDSGQSLPGRLGF Trigger: AAAGCCGAGTCTACCAGGCAGGCTCTGACCTGAGTCCAGGGGCCATCGCTGGCATCGTCCTTGGCTCCCTATTGGGCTTGGCGCTGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
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| 3UTR CCA 90 bp | GGTGGCTGCCCGAACAGTCCATGGGCTGCCACCTGGACAGAGAGTTaGACTGGGGCTGATGACTTGTTGGGCCTTGGCTGGGTGAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: GGCPNSPWAATWTES*TGADDLLGLGWVRA Trigger: AGCCCTCACCCAGCCAAGGCCCAACAAGTCATCAGCCCCAGTCCAACTCTCTGTCCAGGTGGCAGCCCATGGACTGTTCGGGCAGCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
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| 3UTR CCA 90 bp | CCCTGGACTCAGGTCAGAGCCTGCCTGGTAGACTCGGCTTTGGGATaGGGTCCCTGGCAGAGACCCCAAGATGGGCAAGATGCGAAAAGC | + |
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Preference number: 1 (lower is better) Translates to: PWTQVRACLVDSALG*GPWQRPQDGQDAKS Trigger: GCTTTTCGCATCTTGCCCATCTTGGGGTCTCTGCCAGGGACCCCATCCCAAAGCCGAGTCTACCAGGCAGGCTCTGACCTGAGTCCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
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| 3UTR TCA 90 bp | CAGAAGCCCTTCCTGGGTAACGCCTCAGGCAGCAGATACATAGGATaGGAAGGCCAGCCAGCAGCGCCAAGCCCAATAGGGAGCCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: QKPFLGNASGSRYIG*EGQPAAPSPIGSQG Trigger: TCCTTGGCTCCCTATTGGGCTTGGCGCTGCTGGCTGGCCTTCTCATCCTATGTATCTGCTGCCTGAGGCGTTACCCAGGAAGGGCTTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
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| 3UTR TCA 90 bp | GAGGAAAGAAAGAAACAGAAAGCAGTGGGTGAGGTGGGTCTTGCCTaGATTCCAGCACTTGTGGGACTGGGTCAGGAGAGACACGGGTTC | + |
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Preference number: 1 (lower is better) Translates to: EERKKQKAVGEVGLA*IPALVGLGQERHGF Trigger: GAACCCGTGTCTCTCCTGACCCAGTCCCACAAGTGCTGGAATTCAGGCAAGACCCACCTCACCCACTGCTTTCTGTTTCTTTCTTTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR TCA 90 bp | AGTCACATTGGTGCCCTCAGATGCAAAAGGACAGTCTGTGTCTTCTaGGACAAGTGGGAGACAGGAAGCCTCACTCTTAGGGTCCAGTCC | + |
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Preference number: 1 (lower is better) Translates to: SHIGALRCKRTVCVF*DKWETGSLTLRVQS Trigger: GGACTGGACCCTAAGAGTGAGGCTTCCTGTCTCCCACTTGTCTCAGAAGACACAGACTGTCCTTTTGCATCTGAGGGCACCAATGTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR CCA 90 bp | TCACTCTTAGGGTCCAGTCCTCAGGCATACGAAGCTCCATGCTGCTaGACCAAAGCAGGATGTTGTACTCCGAACACTTCATGGAGAGTG | + |
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Preference number: 1 (lower is better) Translates to: SLLGSSPQAYEAPCC*TKAGCCTPNTSWRV Trigger: CACTCTCCATGAAGTGTTCGGAGTACAACATCCTGCTTTGGTCCAGCAGCATGGAGCTTCGTATGCCTGAGGACTGGACCCTAAGAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107977.4 ENSMUST00000203042.2 ENSMUST00000203769.2 |
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| 3UTR CCA 90 bp | GAGCAAACTCTAGGGACAAATAGCTGGAGGGTATGTGTGTGTGGTTaGCAGAAGGCTTATGGAAGAGAAGTCACAGGGGTTGACAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: EQTLGTNSWRVCVCG*QKAYGREVTGVDRG Trigger: GCCTCTGTCAACCCCTGTGACTTCTCTTCCATAAGCCTTCTGCCAACCACACACACATACCCTCCAGCTATTTGTCCCTAGAGTTTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR TCA 90 bp | GTACATGGCTGTCATCTCAGCTCCCAGGAAGCTGAGGCAGGAGACTaGAAATTGTCTGTAACAGTGAACACAGCAAGGTCTGTGTTATGG | + |
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Preference number: 1 (lower is better) Translates to: VHGCHLSSQEAEAGD*KLSVTVNTARSVLW Trigger: CCATAACACAGACCTTGCTGTGTTCACTGTTACAGACAATTTTCAGTCTCCTGCCTCAGCTTCCTGGGAGCTGAGATGACAGCCATGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR GCA 90 bp | GCCTGCTATATGCCAGGCTATGTTTCTGCTGGTATATGTGTGGTGTaGGCCTCACTGAGCTCTCAGTTCAGAGAGGGAAAGTTATCGATA | + |
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Preference number: 1 (lower is better) Translates to: ACYMPGYVSAGICVV*ASLSSQFREGKLSI Trigger: TATCGATAACTTTCCCTCTCTGAACTGAGAGCTCAGTGAGGCGCACACCACACATATACCAGCAGAAACATAGCCTGGCATATAGCAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR TCA 90 bp | TTGACAGAGGCCAAACCACAGGCCCAAGGGTTAAAACGCACCGACTaGAGGATGTTGAAACACTATGTACAGCCCACAGAAAAATTTAGA | + |
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Preference number: 1 (lower is better) Translates to: LTEAKPQAQGLKRTD*RMLKHYVQPTEKFR Trigger: TCTAAATTTTTCTGTGGGCTGTACATAGTGTTTCAACATCCTTCAGTCGGTGCGTTTTAACCCTTGGGCCTGTGGTTTGGCCTCTGTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR-3UTR TCA 90 bp | GCGCCAAGCCCAATAGGGAGCCAAGGACGATGCCAGCGATGGCCCCTGGACTCAATGGCTGATCGCTCCTaGGGGCCCAGAATGAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: APSPIGSQGRCQRWPLDSMADRS*GPRMSR Trigger: CCTGCTCATTCTGGGCCCTCAGGAGCGATCAGCCAT...TGAGTCCAGGGGCCATCGCTGGCATCGTCCTTGGCTCCCTATTGGGCTTGGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
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| 3UTR-3UTR CCA 90 bp | GCGCCAAGCCCAATAGGGAGCCAAGGACGATGCCAGCGATGGCCCCTGGACTCATTGGGATGGGGTCCCTaGCAGAGACCCCAAGATGGG | + |
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Preference number: 2 (lower is better) Translates to: APSPIGSQGRCQRWPLDSLGWGP*QRPQDG Trigger: CCCATCTTGGGGTCTCTGCCAGGGACCCCATCCCAA...TGAGTCCAGGGGCCATCGCTGGCATCGTCCTTGGCTCCCTATTGGGCTTGGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGAGCACGGGAGCCAAGGTCAGCGAGTGCTGCTTCTTCACAGAAGCCCTTCCGAGTGGCACTATGGCTaGTCGCTCCTGAGGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: GEHGSQGQRVLLLHRSPSEWHYG*SLLRAQ Trigger: CTGGGCCCTCAGGAGCGATCAGCCATAGTGCCACTC...GGAAGGGCTTCTGTGAAGAAGCAGCACTCGCTGACCTTGGCTCCCGTGCTCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGAGCACGGGAGCCAAGGTCAGCGAGTGCTGCTTCTTCACAGAAGCCCTTCCGAGGGAGTGGCACTATaGCTGATCGCTCCTGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: GEHGSQGQRVLLLHRSPSEGVAL*LIAPEG Trigger: GCCCTCAGGAGCGATCAGCCATAGTGCCACTCCCTC...GGAAGGGCTTCTGTGAAGAAGCAGCACTCGCTGACCTTGGCTCCCGTGCTCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCAGCAGCGCCAAGCCCAATAGGGAGCCAAGGACGATGCCAGCGATGGCCGAAGCTCCATGCTGCTaGACCAAAGCAGGATGTTGT | + |
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Preference number: 2 (lower is better) Translates to: PASSAKPNREPRTMPAMAEAPCC*TKAGCC Trigger: ACAACATCCTGCTTTGGTCCAGCAGCATGGAGCTTC...GGCCATCGCTGGCATCGTCCTTGGCTCCCTATTGGGCTTGGCGCTGCTGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
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| 3UTR CAA 90 bp | TGGGCTGCCACCTGGACAGAGAGTTGGACTGGGGCTGATGACTTGTaGGGCCTTGGCTGGGTGAGGGCTCTGCATCTTGGTTTTGATGGG | + |
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Preference number: 2 (lower is better) Translates to: WAATWTESWTGADDL*GLGWVRALHLGFDG Trigger: CCCATCAAAACCAAGATGCAGAGCCCTCACCCAGCCAAGGCCCAACAAGTCATCAGCCCCAGTCCAACTCTCTGTCCAGGTGGCAGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
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| 3UTR CAA 90 bp | GGATGTTGTACTCCGAACACTTCATGGAGAGTGGGCCACTGGCTTTaGTCACACCTGGGTGGCTGCCCGAACAGTCCATGGGCTGCCACC | + |
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Preference number: 2 (lower is better) Translates to: GCCTPNTSWRVGHWL*SHLGGCPNSPWAAT Trigger: GGTGGCAGCCCATGGACTGTTCGGGCAGCCACCCAGGTGTGACAAAAGCCAGTGGCCCACTCTCCATGAAGTGTTCGGAGTACAACATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGCTGCTTCTTCACAGAAGCCCTTCCTGGGTAACGCCTCAGGCAGCAGATACGGACGATGCCAGCGATaGCCCCTGGACTCAGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: SAASSQKPFLGNASGSRYGRCQR*PLDSGQ Trigger: CTGACCTGAGTCCAGGGGCCATCGCTGGCATCGTCC...GTATCTGCTGCCTGAGGCGTTACCCAGGAAGGGCTTCTGTGAAGAAGCAGCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTTCTGCTGGTATATGTGTGGTGTGCGCCTCACTGAGCTCTCAGTTCAGAGAGAGGCTGAGGGGACGTaGCCTGGGGCAGGAGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: CFCWYMCGVRLTELSVQREAEGT*PGAGEG Trigger: ACCTTCTCCTGCCCCAGGCCACGTCCCCTCAGCCTC...TCTCTGAACTGAGAGCTCAGTGAGGCGCACACCACACATATACCAGCAGAAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR-3UTR GCA 90 bp | AGTGCTGCTTCTTCACAGAAGCCCTTCCTGGGTAACGCCTCAGGCAGCAGATACCCAAGATGGGCAAGATaGGAAAAGCCCAGGTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: SAASSQKPFLGNASGSRYPRWAR*EKPRSQ Trigger: CTGGGACCTGGGCTTTTCGCATCTTGCCCATCTTGG...GTATCTGCTGCCTGAGGCGTTACCCAGGAAGGGCTTCTGTGAAGAAGCAGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
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| 3UTR CAA 90 bp | GTGTGTGTGGTTGGCAGAAGGCTTATGGAAGAGAAGTCACAGGGGTaGACAGAGGCCAAACCACAGGCCCAAGGGTTAAAACGCACCGAC | + |
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Preference number: 2 (lower is better) Translates to: VCVVGRRLMEEKSQG*TEAKPQAQGLKRTD Trigger: GTCGGTGCGTTTTAACCCTTGGGCCTGTGGTTTGGCCTCTGTCAACCCCTGTGACTTCTCTTCCATAAGCCTTCTGCCAACCACACACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGAAGTCACAGGGGTTGACAGAGGCCAAACCACAGGCCCAAGGGTTAAAAATGGATGAGAGTCTCTaGAGGCTGAGGGGACGTGGC | + |
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Preference number: 2 (lower is better) Translates to: EEKSQGLTEAKPQAQGLKMDESL*RLRGRG Trigger: GCCACGTCCCCTCAGCCTCCAGAGACTCTCATCCAT...TTTTAACCCTTGGGCCTGTGGTTTGGCCTCTGTCAACCCCTGTGACTTCTCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR CAA 90 bp | AGCAGGAGGAAAGAAAGAAACAGAAAGCAGTGGGTGAGGTGGGTCTaGCCTGAATTCCAGCACTTGTGGGACTGGGTCAGGAGAGACACG | + |
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Preference number: 2 (lower is better) Translates to: SRRKERNRKQWVRWV*PEFQHLWDWVRRDT Trigger: CGTGTCTCTCCTGACCCAGTCCCACAAGTGCTGGAATTCAGGCAAGACCCACCTCACCCACTGCTTTCTGTTTCTTTCTTTCCTCCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR CAA 90 bp | TCCTCAGGCATACGAAGCTCCATGCTGCTGGACCAAAGCAGGATGTaGTACTCCGAACACTTCATGGAGAGTGGGCCACTGGCTTTTGTC | + |
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Preference number: 2 (lower is better) Translates to: SSGIRSSMLLDQSRM*YSEHFMESGPLAFV Trigger: GACAAAAGCCAGTGGCCCACTCTCCATGAAGTGTTCGGAGTACAACATCCTGCTTTGGTCCAGCAGCATGGAGCTTCGTATGCCTGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGTGGTTGGCAGAAGGCTTATGGAAGAGAAGTCACAGGGGTTGACAGAGGCCCAGCTCCCAGGAAGCTaGGGCAGGAGACTGAAAATT | + |
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Preference number: 2 (lower is better) Translates to: CVVGRRLMEEKSQGLTEAQLPGS*GRRLKI Trigger: AATTTTCAGTCTCCTGCCTCAGCTTCCTGGGAGCTG...GGCCTCTGTCAACCCCTGTGACTTCTCTTCCATAAGCCTTCTGCCAACCACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGGTTGGCAGAAGGCTTATGGAAGAGAAGTCACAGGGGTTGACAGAGGCCAAGGAAATCAAGAGATaGGGAGGGAGCCGGGTATGG | + |
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Preference number: 2 (lower is better) Translates to: CVVGRRLMEEKSQGLTEAKEIKR*GGSRVW Trigger: CCATACCCGGCTCCCTCCCCATCTCTTGATTTCCTT...GGCCTCTGTCAACCCCTGTGACTTCTCTTCCATAAGCCTTCTGCCAACCACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR-3UTR CCA 90 bp | GGGACAAATAGCTGGAGGGTATGTGTGTGTGGTTGGCAGAAGGCTTATGGAAGACAGCACTTGTGGGACTaGGTCAGGAGAGACACGGGT | + |
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Preference number: 2 (lower is better) Translates to: GTNSWRVCVCGWQKAYGRQHLWD*VRRDTG Trigger: ACCCGTGTCTCTCCTGACCCAGTCCCACAAGTGCTG...TCTTCCATAAGCCTTCTGCCAACCACACACACATACCCTCCAGCTATTTGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGAAGTCACAGGGGTTGACAGAGGCCAAACCACAGGCCCAAGGGTTAAAAAAGCAGTGGGTGAGGTaGGTCTTGCCTGAATTCCAG | + |
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Preference number: 2 (lower is better) Translates to: EEKSQGLTEAKPQAQGLKKQWVR*VLPEFQ Trigger: CTGGAATTCAGGCAAGACCCACCTCACCCACTGCTT...TTTTAACCCTTGGGCCTGTGGTTTGGCCTCTGTCAACCCCTGTGACTTCTCTTC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR-3UTR GCA 90 bp | AGAAACAGAAAGCAGTGGGTGAGGTGGGTCTTGCCTGAATTCCAGCACTTGTGGCCAGAGTCACATTGGTaGCCTCAGATGCAAAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: RNRKQWVRWVLPEFQHLWPESHW*PQMQKD Trigger: GTCCTTTTGCATCTGAGGGCACCAATGTGACTCTGG...CCACAAGTGCTGGAATTCAGGCAAGACCCACCTCACCCACTGCTTTCTGTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR-3UTR GCA 90 bp | GGGACAAATAGCTGGAGGGTATGTGTGTGTGGTTGGCAGAAGGCTTATGGAAGAGAAGGTAGCAACCTTTaGAGACACTGTGGCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: GTNSWRVCVCGWQKAYGREGSNL*RHCGQA Trigger: AGCCTGGCCACAGTGTCTGCAAAGGTTGCTACCTTC...TCTTCCATAAGCCTTCTGCCAACCACACACACATACCCTCCAGCTATTTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR-3UTR CCA 90 bp | CTCCTAGTCCCAGAGTCACATTGGTGCCCTCAGATGCAAAAGGACAGTCTGTGTGAAGCTCCATGCTGCTaGACCAAAGCAGGATGTTGT | + |
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Preference number: 2 (lower is better) Translates to: LLVPESHWCPQMQKDSLCEAPCC*TKAGCC Trigger: ACAACATCCTGCTTTGGTCCAGCAGCATGGAGCTTC...ACACAGACTGTCCTTTTGCATCTGAGGGCACCAATGTGACTCTGGGACTAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR-3UTR TCA 90 bp | GGGACAAATAGCTGGAGGGTATGTGTGTGTGGTTGGCAGAAGGCTTATGGAAGAACAGTCTGTGTCTTCTaGGACAAGTGGGAGACAGGA | + |
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Preference number: 2 (lower is better) Translates to: GTNSWRVCVCGWQKAYGRTVCVF*DKWETG Trigger: TCCTGTCTCCCACTTGTCTCAGAAGACACAGACTGT...TCTTCCATAAGCCTTCTGCCAACCACACACACATACCCTCCAGCTATTTGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR-3UTR GCA 90 bp | AGAAACAGAAAGCAGTGGGTGAGGTGGGTCTTGCCTGAATTCCAGCACTTGTGGAGGCTTCTGAGTTTGTaGCAACCACATTCATCCGTC | + |
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Preference number: 2 (lower is better) Translates to: RNRKQWVRWVLPEFQHLWRLLSL*QPHSSV Trigger: GACGGATGAATGTGGTTGGCACAAACTCAGAAGCCT...CCACAAGTGCTGGAATTCAGGCAAGACCCACCTCACCCACTGCTTTCTGTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR-3UTR GCA 90 bp | GGGACAAATAGCTGGAGGGTATGTGTGTGTGGTTGGCAGAAGGCTTATGGAAGAATTGGTGCCCTCAGATaGAAAAGGACAGTCTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: GTNSWRVCVCGWQKAYGRIGALR*KRTVCV Trigger: GACACAGACTGTCCTTTTGCATCTGAGGGCACCAAT...TCTTCCATAAGCCTTCTGCCAACCACACACACATACCCTCCAGCTATTTGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR-3UTR GCA 90 bp | TGTTTCTGCTGGTATATGTGTGGTGTGCGCCTCACTGAGCTCTCAGTTCAGAGACTAGCCTGGGCTACATaGGATTCCGAGTCAAATAAA | + |
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Preference number: 2 (lower is better) Translates to: CFCWYMCGVRLTELSVQRLAWAT*DSESNK Trigger: TTTATTTGACTCGGAATCGCATGTAGCCCAGGCTAG...TCTCTGAACTGAGAGCTCAGTGAGGCGCACACCACACATATACCAGCAGAAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR-3UTR TCA 90 bp | GGAAGTCCGTCTAATGTGGTAATGGCTACTTCAAGCCTTGATAAATCAATGACAACAGAAAGCAGTGGGTaGGGTGGGTCTTGCCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: GSPSNVVMATSSLDKSMTTESSG*GGSCLN Trigger: ATTCAGGCAAGACCCACCTCACCCACTGCTTTCTGT...TGTCATTGATTTATCAAGGCTTGAAGTAGCCATTACCACATTAGACGGACTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR-3UTR CCA 90 bp | GGAAGTCCGTCTAATGTGGTAATGGCTACTTCAAGCCTTGATAAATCAATGACACTAGGGACAAATAGCTaGAGGGTATGTGTGTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: GSPSNVVMATSSLDKSMTLGTNS*RVCVCG Trigger: ACCACACACACATACCCTCCAGCTATTTGTCCCTAG...TGTCATTGATTTATCAAGGCTTGAAGTAGCCATTACCACATTAGACGGACTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR GCA 72 bp | CCAGCAGCGCCAAGCCCAATAGGGAGCCAAGGACGATaGCAGCGATGGCCCCTGGACTCAGGTCAGAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: PAAPSPIGSQGR*QRWPLDSGQSL Trigger: CAGGCTCTGACCTGAGTCCAGGGGCCATCGCTGGCATCGTCCTTGGCTCCCTATTGGGCTTGGCGCTGCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
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| 3UTR CCA 72 bp | CCAAGCCCAATAGGGAGCCAAGGACGATGCCAGCGATaGCCCCTGGACTCAGGTCAGAGCCTGCCTGGTAGA | + |
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Preference number: 3 (lower is better) Translates to: PSPIGSQGRCQR*PLDSGQSLPGR Trigger: TCTACCAGGCAGGCTCTGACCTGAGTCCAGGGGCCATCGCTGGCATCGTCCTTGGCTCCCTATTGGGCTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
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| 3UTR CCA 72 bp | CAGGTCAGAGCCTGCCTGGTAGACTCGGCTTTGGGATaGGGTCCCTGGCAGAGACCCCAAGATGGGCAAGAT | + |
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Preference number: 3 (lower is better) Translates to: QVRACLVDSALG*GPWQRPQDGQD Trigger: ATCTTGCCCATCTTGGGGTCTCTGCCAGGGACCCCATCCCAAAGCCGAGTCTACCAGGCAGGCTCTGACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
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| 3UTR TCA 72 bp | AGACACTGTGGCCAGGCTCCCCTTCCAGCTTGGAGCTaGAAGCCCTACATGAGGCTTCTGAGTTTGTGCCAA | + |
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Preference number: 3 (lower is better) Translates to: RHCGQAPLPAWS*KPYMRLLSLCQ Trigger: TTGGCACAAACTCAGAAGCCTCATGTAGGGCTTTCAGCTCCAAGCTGGAAGGGGAGCCTGGCCACAGTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR CCA 72 bp | AGTTGGACTGGGGCTGATGACTTGTTGGGCCTTGGCTaGGTGAGGGCTCTGCATCTTGGTTTTGATGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: SWTGADDLLGLG*VRALHLGFDGK Trigger: CTTCCCATCAAAACCAAGATGCAGAGCCCTCACCCAGCCAAGGCCCAACAAGTCATCAGCCCCAGTCCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
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| 3UTR GCA 72 bp | CTGCAGGTGGCTCTCCTAGTCCCAGAGTCACATTGGTaGCCTCAGATGCAAAAGGACAGTCTGTGTCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: LQVALLVPESHW*PQMQKDSLCLL Trigger: CAGAAGACACAGACTGTCCTTTTGCATCTGAGGGCACCAATGTGACTCTGGGACTAGGAGAGCCACCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR CCA 72 bp | GGGTCCAGTCCTCAGGCATACGAAGCTCCATGCTGCTaGACCAAAGCAGGATGTTGTACTCCGAACACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GSSPQAYEAPCC*TKAGCCTPNTS Trigger: TGAAGTGTTCGGAGTACAACATCCTGCTTTGGTCCAGCAGCATGGAGCTTCGTATGCCTGAGGACTGGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107977.4 ENSMUST00000203042.2 ENSMUST00000203769.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGACAAATAGCTGGAGGGTATGTGTGTGTGGTTGGCAGAAGGCTTATGGAAGAGGCTCCCCTTCCAGCTaGGAGCTGAAAGCCCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: GTNSWRVCVCGWQKAYGRGSPSS*ELKALH Trigger: ATGTAGGGCTTTCAGCTCCAAGCTGGAAGGGGAGCC...TCTTCCATAAGCCTTCTGCCAACCACACACACATACCCTCCAGCTATTTGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| 3UTR TCA 72 bp | GGTGCCCTCAGATGCAAAAGGACAGTCTGTGTCTTCTaGGACAAGTGGGAGACAGGAAGCCTCACTCTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: GALRCKRTVCVF*DKWETGSLTLR Trigger: CCTAAGAGTGAGGCTTCCTGTCTCCCACTTGTCTCAGAAGACACAGACTGTCCTTTTGCATCTGAGGGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
||
| 3UTR TCA 72 bp | AAGAAACAGAAAGCAGTGGGTGAGGTGGGTCTTGCCTaGATTCCAGCACTTGTGGGACTGGGTCAGGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: KKQKAVGEVGLA*IPALVGLGQER Trigger: TCTCTCCTGACCCAGTCCCACAAGTGCTGGAATTCAGGCAAGACCCACCTCACCCACTGCTTTCTGTTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| 3UTR-3UTR CAA 90 bp | GGGACAAATAGCTGGAGGGTATGTGTGTGTGGTTGGCAGAAGGCTTATGGAAGACCTGAATTCCAGCACTaGTGGGACTGGGTCAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GTNSWRVCVCGWQKAYGRPEFQH*WDWVRR Trigger: TCTCCTGACCCAGTCCCACAAGTGCTGGAATTCAGG...TCTTCCATAAGCCTTCTGCCAACCACACACACATACCCTCCAGCTATTTGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| 3UTR-3UTR CAA 90 bp | TGTTTCTGCTGGTATATGTGTGGTGTGCGCCTCACTGAGCTCTCAGTTCAGAGAGAGAAGTCACAGGGGTaGACAGAGGCCAAACCACAG | + |
|
Preference number: 3 (lower is better) Translates to: CFCWYMCGVRLTELSVQREKSQG*TEAKPQ Trigger: CTGTGGTTTGGCCTCTGTCAACCCCTGTGACTTCTC...TCTCTGAACTGAGAGCTCAGTGAGGCGCACACCACACATATACCAGCAGAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| 3UTR TCA 72 bp | GCCAAACCACAGGCCCAAGGGTTAAAACGCACCGACTaGAGGATGTTGAAACACTATGTACAGCCCACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: AKPQAQGLKRTD*RMLKHYVQPTE Trigger: TTCTGTGGGCTGTACATAGTGTTTCAACATCCTTCAGTCGGTGCGTTTTAACCCTTGGGCCTGTGGTTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| 3UTR CCA 72 bp | GCCAGTCTGGGCTATCTAGGGAGTCTAAAGCTAGCCTaGGCTACATGCGATTCCGAGTCAAATAAAACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ASLGYLGSLKLA*ATCDSESNKTA Trigger: TGCTGTTTTATTTGACTCGGAATCGCATGTAGCCCAGGCTAGCTTTAGACTCCCTAGATAGCCCAGACTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| 3UTR CCA 72 bp | CTAGGGACAAATAGCTGGAGGGTATGTGTGTGTGGTTaGCAGAAGGCTTATGGAAGAGAAGTCACAGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LGTNSWRVCVCG*QKAYGREVTGV Trigger: AACCCCTGTGACTTCTCTTCCATAAGCCTTCTGCCAACCACACACACATACCCTCCAGCTATTTGTCCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| 3UTR CCA 72 bp | AGTGTCCAGGCAGAGCAAACTCTAGGGACAAATAGCTaGAGGGTATGTGTGTGTGGTTGGCAGAAGGCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: SVQAEQTLGTNS*RVCVCGWQKAY Trigger: ATAAGCCTTCTGCCAACCACACACACATACCCTCCAGCTATTTGTCCCTAGAGTTTGCTCTGCCTGGACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| 3UTR TCA 72 bp | TGTCATCTCAGCTCCCAGGAAGCTGAGGCAGGAGACTaGAAATTGTCTGTAACAGTGAACACAGCAAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: CHLSSQEAEAGD*KLSVTVNTARS Trigger: AGACCTTGCTGTGTTCACTGTTACAGACAATTTTCAGTCTCCTGCCTCAGCTTCCTGGGAGCTGAGATGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| 3UTR TCA 72 bp | ATGTTTCTGCTGGTATATGTGTGGTGTGCGCCTCACTaGGCTCTCAGTTCAGAGAGGGAAAGTTATCGATAT | + |
|
Preference number: 3 (lower is better) Translates to: MFLLVYVWCAPH*ALSSERESYRY Trigger: ATATCGATAACTTTCCCTCTCTGAACTGAGAGCTCAGTGAGGCGCACACCACACATATACCAGCAGAAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| 3UTR CCA 72 bp | TTGTCTGTAACAGTGAACACAGCAAGGTCTGTGTTATaGGATCCTTTTCCCAAAACAAACAAACAAACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LSVTVNTARSVL*DPFPKTNKQTN Trigger: GTTTGTTTGTTTGTTTGTTTTGGGAAAAGGATCCCATAACACAGACCTTGCTGTGTTCACTGTTACAGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR GCA 90 bp | CCAGCCAGCAGCGCCAAGCCCAATAGGGAGCCAAGGACGATGCCAGCGATGGCCGCCCCCAGCACCCAGTaGGCTGCTGCACAGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PASSAKPNREPRTMPAMAAPSTQ*AAAQHR Trigger: TCTGTGCTGTGCAGCAGCGCACTGGGTGCTGGGGGC...GGCCATCGCTGGCATCGTCCTTGGCTCCCTATTGGGCTTGGCGCTGCTGGCTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAGGTAGCAACCTTTGCAGACACTGTGGCCAGGCTCCCCTTCCAGCTTGGAAGCGCCGCCATGGCCTaGCCCCACAGCGGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EKVATFADTVARLPFQLGSAAMA*PHSGQQ Trigger: CTGCTGCCCGCTGTGGGGCCAGGCCATGGCGGCGCT...TCCAAGCTGGAAGGGGAGCCTGGCCACAGTGTCTGCAAAGGTTGCTACCTTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR CCA 90 bp | GCCAAGCCCAATAGGGAGCCAAGGACGATGCCAGCGATGGCCCCTGGACTCAGGCCTGTGAGGGTGATCTaGTTGCCCCCAGCACCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AKPNREPRTMPAMAPGLRPVRVI*LPPAPS Trigger: ACTGGGTGCTGGGGGCAACCAGATCACCCTCACAGG...CCTGAGTCCAGGGGCCATCGCTGGCATCGTCCTTGGCTCCCTATTGGGCTTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
||
| CDS-3UTR CCA 90 bp | TGTGTGGTTGGCAGAAGGCTTATGGAAGAGAAGTCACAGGGGTTGACAGAGGCCTCGGCCCCCACCACCTaGAGCCAGGGGCCGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CVVGRRLMEEKSQGLTEASAPTT*SQGPSL Trigger: CAAGGACGGCCCCTGGCTCCAGGTGGTGGGGGCCGA...GGCCTCTGTCAACCCCTGTGACTTCTCTTCCATAAGCCTTCTGCCAACCACACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR CCA 90 bp | GAGAAGGTAGCAACCTTTGCAGACACTGTGGCCAGGCTCCCCTTCCAGCTTGGACAAGTGTACCGGGCGTaGTCGCTGCGTACCGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: EKVATFADTVARLPFQLGQVYRA*SLRTGR Trigger: ACGTCCGGTACGCAGCGACCACGCCCGGTACACTTG...TCCAAGCTGGAAGGGGAGCCTGGCCACAGTGTCTGCAAAGGTTGCTACCTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR CCA 90 bp | GAGAAGGTAGCAACCTTTGCAGACACTGTGGCCAGGCTCCCCTTCCAGCTTGGAAAGGGGCTTCGGACCTaGCAAGTGTACCGGGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EKVATFADTVARLPFQLGKGLRT*QVYRAW Trigger: CCACGCCCGGTACACTTGCCAGGTCCGAAGCCCCTT...TCCAAGCTGGAAGGGGAGCCTGGCCACAGTGTCTGCAAAGGTTGCTACCTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| 3UTR CAA 72 bp | CAGTGGGTGAGGTGGGTCTTGCCTGAATTCCAGCACTaGTGGGACTGGGTCAGGAGAGACACGGGTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QWVRWVLPEFQH*WDWVRRDTGSG Trigger: CCCTGAACCCGTGTCTCTCCTGACCCAGTCCCACAAGTGCTGGAATTCAGGCAAGACCCACCTCACCCACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| 3UTR CAA 72 bp | GCCACCTGGACAGAGAGTTGGACTGGGGCTGATGACTaGTTGGGCCTTGGCTGGGTGAGGGCTCTGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ATWTESWTGADD*LGLGWVRALHL Trigger: AAGATGCAGAGCCCTCACCCAGCCAAGGCCCAACAAGTCATCAGCCCCAGTCCAACTCTCTGTCCAGGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
||
| CDS-3UTR TCA 90 bp | GAAGAGAAGTCACAGGGGTTGACAGAGGCCAAACCACAGGCCCAAGGGTTAAAAGTGGGGGACAGCCGGTaGCCTCCAGTGCCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: EEKSQGLTEAKPQAQGLKVGDSR*PPVPPP Trigger: TGGTGGTGGCACTGGAGGTCACCGGCTGTCCCCCAC...TTTTAACCCTTGGGCCTGTGGTTTGGCCTCTGTCAACCCCTGTGACTTCTCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR GCA 90 bp | TGTGTGGTTGGCAGAAGGCTTATGGAAGAGAAGTCACAGGGGTTGACAGAGGCCCCTGGCGGCTGGGGGTaGTGGCTGGAGGAGACGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CVVGRRLMEEKSQGLTEAPGGWG*WLEETF Trigger: AAACGTCTCCTCCAGCCAGCACCCCCAGCCGCCAGG...GGCCTCTGTCAACCCCTGTGACTTCTCTTCCATAAGCCTTCTGCCAACCACACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR TCA 90 bp | GAAGAGAAGTCACAGGGGTTGACAGAGGCCAAACCACAGGCCCAAGGGTTAAAATCCAGCAGAGGCTTCTaGACCTGGCGGCTGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EEKSQGLTEAKPQAQGLKSSRGF*TWRLGV Trigger: CACCCCCAGCCGCCAGGTTCAGAAGCCTCTGCTGGA...TTTTAACCCTTGGGCCTGTGGTTTGGCCTCTGTCAACCCCTGTGACTTCTCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR TCA 90 bp | GAGAAGGTAGCAACCTTTGCAGACACTGTGGCCAGGCTCCCCTTCCAGCTTGGAGTGAAGCTGGAGTCTTaGCGAGGAAGGGAAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EKVATFADTVARLPFQLGVKLES*RGREAQ Trigger: CTGGGCTTCCCTTCCTCGTCAAGACTCCAGCTTCAC...TCCAAGCTGGAAGGGGAGCCTGGCCACAGTGTCTGCAAAGGTTGCTACCTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR TCA 90 bp | TACATGAGGCTTCTGAGTTTGTGCCAACCACATTCATCCGTCTGCAGGTGGCTCGCTGCGTACCGGACGTaGGATGAGCAGCTGGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: YMRLLSLCQPHSSVCRWLAAYRT*DEQLVP Trigger: CGGGACCAGCTGCTCATCTCACGTCCGGTACGCAGC...GAGCCACCTGCAGACGGATGAATGTGGTTGGCACAAACTCAGAAGCCTCATGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR TCA 90 bp | TGTGTGGTTGGCAGAAGGCTTATGGAAGAGAAGTCACAGGGGTTGACAGAGGCCGAGTGGCACTATGGCTaGTCGCTCCTGAGGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CVVGRRLMEEKSQGLTEAEWHYG*SLLRAQ Trigger: CTGGGCCCTCAGGAGCGATCAGCCATAGTGCCACTC...GGCCTCTGTCAACCCCTGTGACTTCTCTTCCATAAGCCTTCTGCCAACCACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR GCA 90 bp | TACATGAGGCTTCTGAGTTTGTGCCAACCACATTCATCCGTCTGCAGGTGGCTCGGAAGACCCTGGAACTaGAGGGAGGCGGCAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: YMRLLSLCQPHSSVCRWLGRPWN*REAAGT Trigger: GGTCCCTGCCGCCTCCCTGCAGTTCCAGGGTCTTCC...GAGCCACCTGCAGACGGATGAATGTGGTTGGCACAAACTCAGAAGCCTCATGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR GCA 90 bp | TACATGAGGCTTCTGAGTTTGTGCCAACCACATTCATCCGTCTGCAGGTGGCTCGCCAGGGGCCGTCCTTaGCGAGCCCAGGATGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YMRLLSLCQPHSSVCRWLARGRP*RAQDAL Trigger: AAGAGCATCCTGGGCTCGGCAAGGACGGCCCCTGGC...GAGCCACCTGCAGACGGATGAATGTGGTTGGCACAAACTCAGAAGCCTCATGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR CCA 90 bp | TGTGTGGTTGGCAGAAGGCTTATGGAAGAGAAGTCACAGGGGTTGACAGAGGCCCCCGAGAGGAGCCCATaGAGTGTGAGGAGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CVVGRRLMEEKSQGLTEAPERSP*SVRRRQ Trigger: CTGCCTCCTCCTCACACTCCATGGGCTCCTCTCGGG...GGCCTCTGTCAACCCCTGTGACTTCTCTTCCATAAGCCTTCTGCCAACCACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR CCA 90 bp | AGAAACAGAAAGCAGTGGGTGAGGTGGGTCTTGCCTGAATTCCAGCACTTGTGGTCTGAACCTGGCGGCTaGGGGTGCTGGCTGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RNRKQWVRWVLPEFQHLWSEPGG*GCWLEE Trigger: CTCCTCCAGCCAGCACCCCCAGCCGCCAGGTTCAGA...CCACAAGTGCTGGAATTCAGGCAAGACCCACCTCACCCACTGCTTTCTGTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| 3UTR CAA 72 bp | ACCTGGACAGAGAGTTGGACTGGGGCTGATGACTTGTaGGGCCTTGGCTGGGTGAGGGCTCTGCATCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TWTESWTGADDL*GLGWVRALHLG Trigger: ACCAAGATGCAGAGCCCTCACCCAGCCAAGGCCCAACAAGTCATCAGCCCCAGTCCAACTCTCTGTCCAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
||
| 3UTR CAA 72 bp | ACTCCGAACACTTCATGGAGAGTGGGCCACTGGCTTTaGTCACACCTGGGTGGCTGCCCGAACAGTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: TPNTSWRVGHWL*SHLGGCPNSPW Trigger: CCATGGACTGTTCGGGCAGCCACCCAGGTGTGACAAAAGCCAGTGGCCCACTCTCCATGAAGTGTTCGGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
||
| CDS-3UTR GCA 90 bp | TACATGAGGCTTCTGAGTTTGTGCCAACCACATTCATCCGTCTGCAGGTGGCTCCCCGTTCTGTGCGGATaGGAGGTGGCTCTGCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YMRLLSLCQPHSSVCRWLPVLCG*EVALRL Trigger: AAGGCGCAGAGCCACCTCGCATCCGCACAGAACGGG...GAGCCACCTGCAGACGGATGAATGTGGTTGGCACAAACTCAGAAGCCTCATGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR GCA 90 bp | GTAGACTCGGCTTTGGGATGGGGTCCCTGGCAGAGACCCCAAGATGGGCAAGATCAGCACCCAGTGCGCTaGTGCACAGCACAGAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: VDSALGWGPWQRPQDGQDQHPVR*CTAQNN Trigger: ATTATTCTGTGCTGTGCAGCAGCGCACTGGGTGCTG...ATCTTGCCCATCTTGGGGTCTCTGCCAGGGACCCCATCCCAAAGCCGAGTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTCTGCTGGTATATGTGTGGTGTGCGCCTCACTGAGCTCTCAGTTCAGAGAGCCCCCAGCACCCAGTaGGCTGCTGCACAGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: CFCWYMCGVRLTELSVQRAPSTQ*AAAQHR Trigger: TCTGTGCTGTGCAGCAGCGCACTGGGTGCTGGGGGC...TCTCTGAACTGAGAGCTCAGTGAGGCGCACACCACACATATACCAGCAGAAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR CCA 90 bp | GAGAAGGTAGCAACCTTTGCAGACACTGTGGCCAGGCTCCCCTTCCAGCTTGGAGCTGGGGGTGCTGGCTaGAGGAGACGTTTGAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: EKVATFADTVARLPFQLGAGGAG*RRRLKQ Trigger: TTGTTTCAAACGTCTCCTCCAGCCAGCACCCCCAGC...TCCAAGCTGGAAGGGGAGCCTGGCCACAGTGTCTGCAAAGGTTGCTACCTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR CCA 90 bp | CTCCTAGTCCCAGAGTCACATTGGTGCCCTCAGATGCAAAAGGACAGTCTGTGTGGACGATGCCAGCGATaGCCCCTGGACTCAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLVPESHWCPQMQKDSLCGRCQR*PLDSGQ Trigger: CTGACCTGAGTCCAGGGGCCATCGCTGGCATCGTCC...ACACAGACTGTCCTTTTGCATCTGAGGGCACCAATGTGACTCTGGGACTAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR TCA 90 bp | TACATGAGGCTTCTGAGTTTGTGCCAACCACATTCATCCGTCTGCAGGTGGCTCGCTCTACATCCCAGGTaGGCACTGCAGCTTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YMRLLSLCQPHSSVCRWLALHPR*ALQLPG Trigger: CCCAGGAAGCTGCAGTGCTCACCTGGGATGTAGAGC...GAGCCACCTGCAGACGGATGAATGTGGTTGGCACAAACTCAGAAGCCTCATGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR GCA 90 bp | GAGCTGAAAGCCCTACATGAGGCTTCTGAGTTTGTGCCAACCACATTCATCCGTGCTGGTCCCGTTCTGTaGGGATGCGAGGTGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELKALHEASEFVPTTFIRAGPVL*GCEVAL Trigger: CAGAGCCACCTCGCATCCGCACAGAACGGGACCAGC...ACGGATGAATGTGGTTGGCACAAACTCAGAAGCCTCATGTAGGGCTTTCAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR GCA 90 bp | GAGAAGGTAGCAACCTTTGCAGACACTGTGGCCAGGCTCCCCTTCCAGCTTGGACAGCACCCAGTGCGCTaGTGCACAGCACAGAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: EKVATFADTVARLPFQLGQHPVR*CTAQNN Trigger: ATTATTCTGTGCTGTGCAGCAGCGCACTGGGTGCTG...TCCAAGCTGGAAGGGGAGCCTGGCCACAGTGTCTGCAAAGGTTGCTACCTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR CCA 90 bp | GAAGAGAAGTCACAGGGGTTGACAGAGGCCAAACCACAGGCCCAAGGGTTAAAAGAGCCCAAAGCTGGCTaGAGGGCAAGGAGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EEKSQGLTEAKPQAQGLKEPKAG*RARSSA Trigger: AGCTGAGCTCCTTGCCCTCCAGCCAGCTTTGGGCTC...TTTTAACCCTTGGGCCTGTGGTTTGGCCTCTGTCAACCCCTGTGACTTCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR CCA 90 bp | GAGCTGAAAGCCCTACATGAGGCTTCTGAGTTTGTGCCAACCACATTCATCCGTGGAGGAGGCAGAGGGTaGCTGAGAGCCCAAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ELKALHEASEFVPTTFIRGGGRG*LRAQSW Trigger: CCAGCTTTGGGCTCTCAGCCACCCTCTGCCTCCTCC...ACGGATGAATGTGGTTGGCACAAACTCAGAAGCCTCATGTAGGGCTTTCAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR CCA 90 bp | GAAGAGAAGTCACAGGGGTTGACAGAGGCCAAACCACAGGCCCAAGGGTTAAAACTGTCTCTGGCGCCCTaGGCTGTACTGACAACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EEKSQGLTEAKPQAQGLKLSLAP*AVLTTG Trigger: CCCAGTTGTCAGTACAGCCCAGGGCGCCAGAGACAG...TTTTAACCCTTGGGCCTGTGGTTTGGCCTCTGTCAACCCCTGTGACTTCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR CCA 90 bp | GAAGAGAAGTCACAGGGGTTGACAGAGGCCAAACCACAGGCCCAAGGGTTAAAACCTGTGAGGGTGATCTaGTTGCCCCCAGCACCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EEKSQGLTEAKPQAQGLKPVRVI*LPPAPS Trigger: ACTGGGTGCTGGGGGCAACCAGATCACCCTCACAGG...TTTTAACCCTTGGGCCTGTGGTTTGGCCTCTGTCAACCCCTGTGACTTCTCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR CCA 90 bp | CTCCTAGTCCCAGAGTCACATTGGTGCCCTCAGATGCAAAAGGACAGTCTGTGTAGCACTGCAGCTTCCTaGGCTCTCTGCAGCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLVPESHWCPQMQKDSLCSTAAS*ALCSLQ Trigger: CTGGAGGCTGCAGAGAGCCCAGGAAGCTGCAGTGCT...ACACAGACTGTCCTTTTGCATCTGAGGGCACCAATGTGACTCTGGGACTAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR CCA 90 bp | CTCCTAGTCCCAGAGTCACATTGGTGCCCTCAGATGCAAAAGGACAGTCTGTGTTTGGGATGGGGTCCCTaGCAGAGACCCCAAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLVPESHWCPQMQKDSLCLGWGP*QRPQDG Trigger: CCCATCTTGGGGTCTCTGCCAGGGACCCCATCCCAA...ACACAGACTGTCCTTTTGCATCTGAGGGCACCAATGTGACTCTGGGACTAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
||
| CDS-3UTR TCA 90 bp | TACATGAGGCTTCTGAGTTTGTGCCAACCACATTCATCCGTCTGCAGGTGGCTCCAAGGAGCTCAGCTCTaGAGGCCAGGAGTAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: YMRLLSLCQPHSSVCRWLQGAQL*RPGVGR Trigger: CCTTCCTACTCCTGGCCTTCAGAGCTGAGCTCCTTG...GAGCCACCTGCAGACGGATGAATGTGGTTGGCACAAACTCAGAAGCCTCATGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR TCA 90 bp | GAGCTGAAAGCCCTACATGAGGCTTCTGAGTTTGTGCCAACCACATTCATCCGTATGGCTGATCGCTCCTaGGGGCCCAGAATGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ELKALHEASEFVPTTFIRMADRS*GPRMSR Trigger: CCTGCTCATTCTGGGCCCTCAGGAGCGATCAGCCAT...ACGGATGAATGTGGTTGGCACAAACTCAGAAGCCTCATGTAGGGCTTTCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR TCA 90 bp | CTCCTAGTCCCAGAGTCACATTGGTGCCCTCAGATGCAAAAGGACAGTCTGTGTTTTTTGCTGGTGGGGTaGGCACGGGAGCCAAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLVPESHWCPQMQKDSLCFLLVG*AREPRS Trigger: TGACCTTGGCTCCCGTGCTCACCCCACCAGCAAAAA...ACACAGACTGTCCTTTTGCATCTGAGGGCACCAATGTGACTCTGGGACTAGGAG 54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR GCA 90 bp | TGTTTCTGCTGGTATATGTGTGGTGTGCGCCTCACTGAGCTCTCAGTTCAGAGAAGCGAAAGCGGAGGCTaGGGTCCACAGGACCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CFCWYMCGVRLTELSVQRSESGG*GPQDLL Trigger: AAGGAGGTCCTGTGGACCGCAGCCTCCGCTTTCGCT...TCTCTGAACTGAGAGCTCAGTGAGGCGCACACCACACATATACCAGCAGAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR CCA 90 bp | AGAAACAGAAAGCAGTGGGTGAGGTGGGTCTTGCCTGAATTCCAGCACTTGTGGTCCTCTACTATGGGCTaGAGCAGCACTTCCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RNRKQWVRWVLPEFQHLWSSTMG*SSTSWG Trigger: CCCCCAGGAAGTGCTGCTCCAGCCCATAGTAGAGGA...CCACAAGTGCTGGAATTCAGGCAAGACCCACCTCACCCACTGCTTTCTGTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR CCA 90 bp | TGTTTCTGCTGGTATATGTGTGGTGTGCGCCTCACTGAGCTCTCAGTTCAGAGAGAGGGAGTGGCACTATaGCTGATCGCTCCTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CFCWYMCGVRLTELSVQREGVAL*LIAPEG Trigger: GCCCTCAGGAGCGATCAGCCATAGTGCCACTCCCTC...TCTCTGAACTGAGAGCTCAGTGAGGCGCACACCACACATATACCAGCAGAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR CCA 90 bp | TGTTTCTGCTGGTATATGTGTGGTGTGCGCCTCACTGAGCTCTCAGTTCAGAGACCATGGGCTGCCACCTaGACAGAGAGTTGGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CFCWYMCGVRLTELSVQRPWAAT*TESWTG Trigger: CCCAGTCCAACTCTCTGTCCAGGTGGCAGCCCATGG...TCTCTGAACTGAGAGCTCAGTGAGGCGCACACCACACATATACCAGCAGAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR TCA 90 bp | GAAGAGAAGTCACAGGGGTTGACAGAGGCCAAACCACAGGCCCAAGGGTTAAAAGGATGTGAAAGCCAGTaGGGAGAGTGCCTCGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: EEKSQGLTEAKPQAQGLKGCESQ*GECLAL Trigger: TAGAGCGAGGCACTCTCCTCACTGGCTTTCACATCC...TTTTAACCCTTGGGCCTGTGGTTTGGCCTCTGTCAACCCCTGTGACTTCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR TCA 90 bp | GGGACAAATAGCTGGAGGGTATGTGTGTGTGGTTGGCAGAAGGCTTATGGAAGATCTGCATCTTGGTTTTaGTGGGAAGGGGCCGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTNSWRVCVCGWQKAYGRSASWF*WEGAVG Trigger: CCCCACGGCCCCTTCCCATCAAAACCAAGATGCAGA...TCTTCCATAAGCCTTCTGCCAACCACACACACATACCCTCCAGCTATTTGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR GCA 90 bp | GGGACAAATAGCTGGAGGGTATGTGTGTGTGGTTGGCAGAAGGCTTATGGAAGAATCCCAGGTGAGCACTaGAGCTTCCTGGGCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTNSWRVCVCGWQKAYGRIPGEH*SFLGSL Trigger: CAGAGAGCCCAGGAAGCTGCAGTGCTCACCTGGGAT...TCTTCCATAAGCCTTCTGCCAACCACACACACATACCCTCCAGCTATTTGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR GCA 90 bp | CTCCTAGTCCCAGAGTCACATTGGTGCCCTCAGATGCAAAAGGACAGTCTGTGTCCAAGATGGGCAAGATaGGAAAAGCCCAGGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLVPESHWCPQMQKDSLCPRWAR*EKPRSQ Trigger: CTGGGACCTGGGCTTTTCGCATCTTGCCCATCTTGG...ACACAGACTGTCCTTTTGCATCTGAGGGCACCAATGTGACTCTGGGACTAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR GCA 90 bp | CTCCTAGTCCCAGAGTCACATTGGTGCCCTCAGATGCAAAAGGACAGTCTGTGTACTCAGGTCAGAGCCTaGCTGGTAGACTCGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLVPESHWCPQMQKDSLCTQVRA*LVDSAL Trigger: CAAAGCCGAGTCTACCAGGCAGGCTCTGACCTGAGT...ACACAGACTGTCCTTTTGCATCTGAGGGCACCAATGTGACTCTGGGACTAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR CCA 90 bp | GGAAGTCCGTCTAATGTGGTAATGGCTACTTCAAGCCTTGATAAATCAATGACACGTGTGGCCACCAGGTaGCGGGCCAGGCAGGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: GSPSNVVMATSSLDKSMTRVATR*RARQVT Trigger: CGTCACCTGCCTGGCCCGCCACCTGGTGGCCACACG...TGTCATTGATTTATCAAGGCTTGAAGTAGCCATTACCACATTAGACGGACTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| 3UTR CAA 72 bp | ATACGAAGCTCCATGCTGCTGGACCAAAGCAGGATGTaGTACTCCGAACACTTCATGGAGAGTGGGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: IRSSMLLDQSRM*YSEHFMESGPL Trigger: CAGTGGCCCACTCTCCATGAAGTGTTCGGAGTACAACATCCTGCTTTGGTCCAGCAGCATGGAGCTTCGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107977.4 ENSMUST00000203042.2 ENSMUST00000203769.2 |
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| CDS-3UTR TCA 90 bp | GGGACAAATAGCTGGAGGGTATGTGTGTGTGGTTGGCAGAAGGCTTATGGAAGAAGCAGATACATAGGATaGGAAGGCCAGCCAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GTNSWRVCVCGWQKAYGRSRYIG*EGQPAA Trigger: CGCTGCTGGCTGGCCTTCTCATCCTATGTATCTGCT...TCTTCCATAAGCCTTCTGCCAACCACACACACATACCCTCCAGCTATTTGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR CCA 90 bp | AGAAACAGAAAGCAGTGGGTGAGGTGGGTCTTGCCTGAATTCCAGCACTTGTGGCCTGAGGAAACCGGTTaGAATCAGGGATTCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RNRKQWVRWVLPEFQHLWPEETG*NQGFQQ Trigger: CTGCTGGAATCCCTGATTCCAACCGGTTTCCTCAGG...CCACAAGTGCTGGAATTCAGGCAAGACCCACCTCACCCACTGCTTTCTGTTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR CCA 90 bp | TGTTTCTGCTGGTATATGTGTGGTGTGCGCCTCACTGAGCTCTCAGTTCAGAGATTGTTGGGCCTTGGCTaGGTGAGGGCTCTGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CFCWYMCGVRLTELSVQRLLGLG*VRALHL Trigger: AAGATGCAGAGCCCTCACCCAGCCAAGGCCCAACAA...TCTCTGAACTGAGAGCTCAGTGAGGCGCACACCACACATATACCAGCAGAAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR TCA 90 bp | AGAAACAGAAAGCAGTGGGTGAGGTGGGTCTTGCCTGAATTCCAGCACTTGTGGCTTGAATTCAGCCCCTaGGGAAACCGGTTGGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: RNRKQWVRWVLPEFQHLWLEFSP*GNRLES Trigger: TGATTCCAACCGGTTTCCTCAGGGGCTGAATTCAAG...CCACAAGTGCTGGAATTCAGGCAAGACCCACCTCACCCACTGCTTTCTGTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR TCA 90 bp | TGTTTCTGCTGGTATATGTGTGGTGTGCGCCTCACTGAGCTCTCAGTTCAGAGATCCAGGCACATGGCTTaGATTCAGCCCCTGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CFCWYMCGVRLTELSVQRSRHMA*IQPLRK Trigger: TTTCCTCAGGGGCTGAATTCAAGCCATGTGCCTGGA...TCTCTGAACTGAGAGCTCAGTGAGGCGCACACCACACATATACCAGCAGAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR TCA 90 bp | TACATGAGGCTTCTGAGTTTGTGCCAACCACATTCATCCGTCTGCAGGTGGCTCCGGAAACATTGGTCCTaGATAATCCAGGCACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: YMRLLSLCQPHSSVCRWLRKHWS*IIQAHG Trigger: GCCATGTGCCTGGATTATTCAGGACCAATGTTTCCG...GAGCCACCTGCAGACGGATGAATGTGGTTGGCACAAACTCAGAAGCCTCATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR TCA 90 bp | AGAAACAGAAAGCAGTGGGTGAGGTGGGTCTTGCCTGAATTCCAGCACTTGTGGCCAGGTTCAAGGTTGTaGTGCTCCAGGGATAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RNRKQWVRWVLPEFQHLWPGSRL*CSRDSF Trigger: AAAGCTATCCCTGGAGCATCACAACCTTGAACCTGG...CCACAAGTGCTGGAATTCAGGCAAGACCCACCTCACCCACTGCTTTCTGTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR TCA 90 bp | GGAAGTCCGTCTAATGTGGTAATGGCTACTTCAAGCCTTGATAAATCAATGACACCAGCCGGGCAGAGGTaGGTTCCAGACCCCCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: GSPSNVVMATSSLDKSMTPAGQR*VPDPLE Trigger: TTCGAGGGGGTCTGGAACTCACCTCTGCCCGGCTGG...TGTCATTGATTTATCAAGGCTTGAAGTAGCCATTACCACATTAGACGGACTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR CCA 90 bp | CTCCTAGTCCCAGAGTCACATTGGTGCCCTCAGATGCAAAAGGACAGTCTGTGTGGCTGTACTGACAACTaGGGCAAGGGCTCAAATACA | + |
|
Preference number: 4 (lower is better) Translates to: LLVPESHWCPQMQKDSLCGCTDN*GKGSNT Trigger: TGTATTTGAGCCCTTGCCCCAGTTGTCAGTACAGCC...ACACAGACTGTCCTTTTGCATCTGAGGGCACCAATGTGACTCTGGGACTAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR CCA 90 bp | GGGACAAATAGCTGGAGGGTATGTGTGTGTGGTTGGCAGAAGGCTTATGGAAGACACCACCACATCCCCTaGCTGTGTCTCCTCTACTAT | + |
|
Preference number: 4 (lower is better) Translates to: GTNSWRVCVCGWQKAYGRHHHIP*LCLLYY Trigger: ATAGTAGAGGAGACACAGCCAGGGGATGTGGTGGTG...TCTTCCATAAGCCTTCTGCCAACCACACACACATACCCTCCAGCTATTTGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR TCA 90 bp | TGTGTGGTTGGCAGAAGGCTTATGGAAGAGAAGTCACAGGGGTTGACAGAGGCCAGCTTGGTAAATCTCTaGAGAAATTTTGGATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CVVGRRLMEEKSQGLTEASLVNL*RNFGSR Trigger: CCTGGATCCAAAATTTCTTCAGAGATTTACCAAGCT...GGCCTCTGTCAACCCCTGTGACTTCTCTTCCATAAGCCTTCTGCCAACCACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR GCA 90 bp | CCCAAAACAAACAAACAAACAAACAAACAAACAAACAAGCAGGAGGAAAGAAAGGCCGGTGACCTCCAGTaGCACCACCACATCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKTNKQTNKQTNKQEERKAGDLQ*HHHIPW Trigger: CCAGGGGATGTGGTGGTGGCACTGGAGGTCACCGGC...CTTTCTTTCCTCCTGCTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR TCA 90 bp | TGTTTCTGCTGGTATATGTGTGGTGTGCGCCTCACTGAGCTCTCAGTTCAGAGATTGGTGTCTGGAGTTTaGACTGATATTTGTGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CFCWYMCGVRLTELSVQRLVSGV*TDICEA Trigger: AGCTTCACAAATATCAGTTCAAACTCCAGACACCAA...TCTCTGAACTGAGAGCTCAGTGAGGCGCACACCACACATATACCAGCAGAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR GCA 90 bp | GGAAGTCCGTCTAATGTGGTAATGGCTACTTCAAGCCTTGATAAATCAATGACAGCTTCCTGGGCTCTCTaGAGCCTCCAGGAAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: GSPSNVVMATSSLDKSMTASWAL*SLQEEI Trigger: TATTTCTTCCTGGAGGCTGCAGAGAGCCCAGGAAGC...TGTCATTGATTTATCAAGGCTTGAAGTAGCCATTACCACATTAGACGGACTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR CCA 90 bp | GGAAGTCCGTCTAATGTGGTAATGGCTACTTCAAGCCTTGATAAATCAATGACAACCTGGACAGAGAGTTaGACTGGGGCTGATGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSPSNVVMATSSLDKSMTTWTES*TGADDL Trigger: CAAGTCATCAGCCCCAGTCCAACTCTCTGTCCAGGT...TGTCATTGATTTATCAAGGCTTGAAGTAGCCATTACCACATTAGACGGACTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR TCA 90 bp | CCCAAAACAAACAAACAAACAAACAAACAAACAAACAAGCAGGAGGAAAGAAAGAGTCTCTACTCATGGTaGCTCTGTCCACTTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKTNKQTNKQTNKQEERKSLYSW*LCPLQS Trigger: GCTCTGAAGTGGACAGAGTCACCATGAGTAGAGACT...CTTTCTTTCCTCCTGCTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR GCA 90 bp | CCCAAAACAAACAAACAAACAAACAAACAAACAAACAAGCAGGAGGAAAGAAAGAGAGCTATCTGTCCATaGCTGGATGTGAAAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PKTNKQTNKQTNKQEERKRAICP*LDVKAS Trigger: ACTGGCTTTCACATCCAGGCATGGACAGATAGCTCT...CTTTCTTTCCTCCTGCTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS GCA 90 bp | GATGGCACCGGTCCCGCTCGGACGCCTTCGGGAAGACCCTGGAACTaGAGGGAGGCGGCAGGGACCCCGCCAGGCCAGGAGCAGCGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: DGTGPARTPSGRPWN*REAAGTPPGQEQRK Trigger: CTTTCGCTGCTCCTGGCCTGGCGGGGTCCCTGCCGCCTCCCTGCAGTTCCAGGGTCTTCCCGAAGGCGTCCGAGCGGGACCGGTGCCATC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS CCA 90 bp | AGCGTAGATGGCACCGGTCCCGCTCGGACGCCTTCGGGAAGACCCTaGAACTGCAGGGAGGCGGCAGGGACCCCGCCAGGCCAGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVDGTGPARTPSGRP*NCREAAGTPPGQEQ Trigger: CTGCTCCTGGCCTGGCGGGGTCCCTGCCGCCTCCCTGCAGTTCCAGGGTCTTCCCGAAGGCGTCCGAGCGGGACCGGTGCCATCTACGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS GCA 90 bp | AGGCGGCAGGGACCCCGCCAGGCCAGGAGCAGCGAAAGCGGAGGCTaGGGTCCACAGGACCTCCTTCAACTGAGCATTGTGGGGCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RRQGPRQARSSESGG*GPQDLLQLSIVGLR Trigger: CCGGAGCCCCACAATGCTCAGTTGAAGGAGGTCCTGTGGACCGCAGCCTCCGCTTTCGCTGCTCCTGGCCTGGCGGGGTCCCTGCCGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS TCA 90 bp | CCTGGCAAGTGTACCGGGCGTGGTCGCTGCGTACCGGACGTGAGATaGGCAGCTGGTCCCGTTCTGTGCGGATGCGAGGTGGCTCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PGKCTGRGRCVPDVR*AAGPVLCGCEVALR Trigger: GCGCAGAGCCACCTCGCATCCGCACAGAACGGGACCAGCTGCTCATCTCACGTCCGGTACGCAGCGACCACGCCCGGTACACTTGCCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS CCA 90 bp | GTGTACCGGGCGTGGTCGCTGCGTACCGGACGTGAGATGAGCAGCTaGTCCCGTTCTGTGCGGATGCGAGGTGGCTCTGCGCCTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VYRAWSLRTGREMSS*SRSVRMRGGSAPSG Trigger: CCCTGAAGGCGCAGAGCCACCTCGCATCCGCACAGAACGGGACCAGCTGCTCATCTCACGTCCGGTACGCAGCGACCACGCCCGGTACAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS TCA 90 bp | GTCCCGTTCTGTGCGGATGCGAGGTGGCTCTGCGCCTTCAGGGTCTaGGGTGCCCAGGGCTCGTCCGTCTCTACTCCAGCTCAGCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VPFCADARWLCAFRV*GAQGSSVSTPAQLP Trigger: GGGAAGCTGAGCTGGAGTAGAGACGGACGAGCCCTGGGCACCTCAGACCCTGAAGGCGCAGAGCCACCTCGCATCCGCACAGAACGGGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS TCA 90 bp | TCGGACCTGGCAAGTGTACCGGGCGTGGTCGCTGCGTACCGGACGTaGGATGAGCAGCTGGTCCCGTTCTGTGCGGATGCGAGGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SDLASVPGVVAAYRT*DEQLVPFCADARWL Trigger: GAGCCACCTCGCATCCGCACAGAACGGGACCAGCTGCTCATCTCACGTCCGGTACGCAGCGACCACGCCCGGTACACTTGCCAGGTCCGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS GCA 90 bp | GTTCTGTGCGGATGCGAGGTGGCTCTGCGCCTTCAGGGTCTGAGGTaGCCAGGGCTCGTCCGTCTCTACTCCAGCTCAGCTTCCCGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: VLCGCEVALRLQGLR*PGLVRLYSSSASRY Trigger: GTAGCGGGAAGCTGAGCTGGAGTAGAGACGGACGAGCCCTGGGCACCTCAGACCCTGAAGGCGCAGAGCCACCTCGCATCCGCACAGAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS CCA 90 bp | TCGGTGTGGCCAAAGGGGCTTCGGACCTGGCAAGTGTACCGGGCGTaGTCGCTGCGTACCGGACGTGAGATGAGCAGCTGGTCCCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SVWPKGLRTWQVYRA*SLRTGREMSSWSRS Trigger: AGAACGGGACCAGCTGCTCATCTCACGTCCGGTACGCAGCGACCACGCCCGGTACACTTGCCAGGTCCGAAGCCCCTTTGGCCACACCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS CCA 90 bp | CTGACGTCAGCTGCAGCTTCGGTGTGGCCAAAGGGGCTTCGGACCTaGCAAGTGTACCGGGCGTGGTCGCTGCGTACCGGACGTGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LTSAAASVWPKGLRT*QVYRAWSLRTGREM Trigger: CATCTCACGTCCGGTACGCAGCGACCACGCCCGGTACACTTGCCAGGTCCGAAGCCCCTTTGGCCACACCGAAGCTGCAGCTGACGTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS-3UTR CAA 90 bp | GGTGAGCACGGGAGCCAAGGTCAGCGAGTGCTGCTTCTTCACAGAAGCCCTTCCGTGAGGGTGATCTGGTaGCCCCCAGCACCCAGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: GEHGSQGQRVLLLHRSPSVRVIW*PPAPSA Trigger: CGCACTGGGTGCTGGGGGCAACCAGATCACCCTCAC...GGAAGGGCTTCTGTGAAGAAGCAGCACTCGCTGACCTTGGCTCCCGTGCTCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203042.2 |
||
| CDS CCA 90 bp | TCCCCTGGCTGTGTCTCCTCTACTATGGGCTGGAGCAGCACTTCCTaGGGGGCTTCCGGGATGATCGTGCATGTACGTGTGGCCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPGCVSSTMGWSSTS*GASGMIVHVRVATR Trigger: CCTGGTGGCCACACGTACATGCACGATCATCCCGGAAGCCCCCCAGGAAGTGCTGCTCCAGCCCATAGTAGAGGAGACACAGCCAGGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
||
| CDS CCA 90 bp | TCCCAATCCAGGCTGAAGTTGTTGATGAGGAGCTTTCGGCCATCCTaGCTAAGCTGTAGTCGGCCCCCACCACCTGGAGCCAGGGGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: SQSRLKLLMRSFRPS*LSCSRPPPPGARGR Trigger: ACGGCCCCTGGCTCCAGGTGGTGGGGGCCGACTACAGCTTAGCCAGGATGGCCGAAAGCTCCTCATCAACAACTTCAGCCTGGATTGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
||
| CDS CCA 90 bp | AGCTTAGCCGCAGCTCGGCTGCTCCTTCTTCTGTCTCTGGCGCCCTaGGCTGTACTGACAACTGGGGCAAGGGCTCAAATACACCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SLAAARLLLLLSLAP*AVLTTGARAQIHPP Trigger: TGGTGGGTGTATTTGAGCCCTTGCCCCAGTTGTCAGTACAGCCCAGGGCGCCAGAGACAGAAGAAGGAGCAGCCGAGCTGCGGCTAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
||
| CDS CCA 90 bp | AGGAGAGTGCCTCGCTCTACATCCCAGGTGAGCACTGCAGCTTCCTaGGCTCTCTGCAGCCTCCAGGAAGAAATAGAGGGCCCTGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRVPRSTSQVSTAAS*ALCSLQEEIEGPVR Trigger: CCTCACAGGGCCCTCTATTTCTTCCTGGAGGCTGCAGAGAGCCCAGGAAGCTGCAGTGCTCACCTGGGATGTAGAGCGAGGCACTCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS GCA 90 bp | AAAGCCAGTGAGGAGAGTGCCTCGCTCTACATCCCAGGTGAGCACTaGAGCTTCCTGGGCTCTCTGCAGCCTCCAGGAAGAAATAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: KASEESASLYIPGEH*SFLGSLQPPGRNRG Trigger: CCCTCTATTTCTTCCTGGAGGCTGCAGAGAGCCCAGGAAGCTGCAGTGCTCACCTGGGATGTAGAGCGAGGCACTCTCCTCACTGGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS-3UTR CAA 90 bp | GAGAAGGTAGCAACCTTTGCAGACACTGTGGCCAGGCTCCCCTTCCAGCTTGGAATCCAGGCACATGGCTaGAATTCAGCCCCTGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: EKVATFADTVARLPFQLGIQAHG*NSAPEE Trigger: TTCCTCAGGGGCTGAATTCAAGCCATGTGCCTGGAT...TCCAAGCTGGAAGGGGAGCCTGGCCACAGTGTCTGCAAAGGTTGCTACCTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR CAA 90 bp | TGTGTGGTTGGCAGAAGGCTTATGGAAGAGAAGTCACAGGGGTTGACAGAGGCCCTCTGCATCTTGGTTTaGATGGGAAGGGGCCGTGGG | + |
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Preference number: 5 (lower is better) Translates to: CVVGRRLMEEKSQGLTEALCILV*MGRGRG Trigger: CCCACGGCCCCTTCCCATCAAAACCAAGATGCAGAG...GGCCTCTGTCAACCCCTGTGACTTCTCTTCCATAAGCCTTCTGCCAACCACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR CAA 90 bp | GGGACAAATAGCTGGAGGGTATGTGTGTGTGGTTGGCAGAAGGCTTATGGAAGAGGGGCTGATGACTTGTaGGGCCTTGGCTGGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: GTNSWRVCVCGWQKAYGRGADDL*GLGWVR Trigger: CCTCACCCAGCCAAGGCCCAACAAGTCATCAGCCCC...TCTTCCATAAGCCTTCTGCCAACCACACACACATACCCTCCAGCTATTTGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR CAA 90 bp | CTCCTAGTCCCAGAGTCACATTGGTGCCCTCAGATGCAAAAGGACAGTCTGTGTACTGGGGCTGATGACTaGTTGGGCCTTGGCTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: LLVPESHWCPQMQKDSLCTGADD*LGLGWV Trigger: CACCCAGCCAAGGCCCAACAAGTCATCAGCCCCAGT...ACACAGACTGTCCTTTTGCATCTGAGGGCACCAATGTGACTCTGGGACTAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS TCA 90 bp | ATGGTGACTCTGTCCACTTCAGAGCTATCTGTCCATGCCTGGATGTaGAAGCCAGTGAGGAGAGTGCCTCGCTCTACATCCCAGGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: MVTLSTSELSVHAWM*KPVRRVPRSTSQVS Trigger: GCTCACCTGGGATGTAGAGCGAGGCACTCTCCTCACTGGCTTTCACATCCAGGCATGGACAGATAGCTCTGAAGTGGACAGAGTCACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS-3UTR CAA 90 bp | TGTTTCTGCTGGTATATGTGTGGTGTGCGCCTCACTGAGCTCTCAGTTCAGAGATGTGAAGCTGGAGTCTaGACGAGGAAGGGAAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: CFCWYMCGVRLTELSVQRCEAGV*TRKGSP Trigger: TGGGCTTCCCTTCCTCGTCAAGACTCCAGCTTCACA...TCTCTGAACTGAGAGCTCAGTGAGGCGCACACCACACATATACCAGCAGAAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR CAA 90 bp | GGAAGTCCGTCTAATGTGGTAATGGCTACTTCAAGCCTTGATAAATCAATGACAGAGCCCAGGATGCTCTaGAGGGTGGGGGACAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: GSPSNVVMATSSLDKSMTEPRML*RVGDSR Trigger: CCGGCTGTCCCCCACCCTCAAGAGCATCCTGGGCTC...TGTCATTGATTTATCAAGGCTTGAAGTAGCCATTACCACATTAGACGGACTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR CAA 90 bp | CTCCTAGTCCCAGAGTCACATTGGTGCCCTCAGATGCAAAAGGACAGTCTGTGTTCCAGGCTGAAGTTGTaGATGAGGAGCTTTCGGCCA | + |
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Preference number: 5 (lower is better) Translates to: LLVPESHWCPQMQKDSLCSRLKL*MRSFRP Trigger: TGGCCGAAAGCTCCTCATCAACAACTTCAGCCTGGA...ACACAGACTGTCCTTTTGCATCTGAGGGCACCAATGTGACTCTGGGACTAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR CAA 90 bp | GGAAGTCCGTCTAATGTGGTAATGGCTACTTCAAGCCTTGATAAATCAATGACAGTGAGGGTGATCTGGTaGCCCCCAGCACCCAGTGCG | + |
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Preference number: 5 (lower is better) Translates to: GSPSNVVMATSSLDKSMTVRVIW*PPAPSA Trigger: CGCACTGGGTGCTGGGGGCAACCAGATCACCCTCAC...TGTCATTGATTTATCAAGGCTTGAAGTAGCCATTACCACATTAGACGGACTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS TCA 90 bp | GGAGTCTTGACGAGGAAGGGAAGCCCAGAGTCTTTGTCAGGATCTTaGGAATCTAAACCATCAAGAGACACTCTGGAAGGAGGGGTTTCA | + |
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Preference number: 5 (lower is better) Translates to: GVLTRKGSPESLSGS*ESKPSRDTLEGGVS Trigger: TGAAACCCCTCCTTCCAGAGTGTCTCTTGATGGTTTAGATTCTCAAGATCCTGACAAAGACTCTGGGCTTCCCTTCCTCGTCAAGACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS-3UTR CAA 90 bp | CCCAAAACAAACAAACAAACAAACAAACAAACAAACAAGCAGGAGGAAAGAAAGAGCCAGGGGCCGTCCTaGCCGAGCCCAGGATGCTCT | + |
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Preference number: 5 (lower is better) Translates to: PKTNKQTNKQTNKQEERKSQGPS*PSPGCS Trigger: AGAGCATCCTGGGCTCGGCAAGGACGGCCCCTGGCT...CTTTCTTTCCTCCTGCTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS TCA 90 bp | AGCTTTGAACCTGAGGCCTTGGTAGGTACTTTGGTGTCTGGAGTTTaGACTGATATTTGTGAAGCTGGAGTCTTGACGAGGAAGGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: SFEPEALVGTLVSGV*TDICEAGVLTRKGS Trigger: GCTTCCCTTCCTCGTCAAGACTCCAGCTTCACAAATATCAGTTCAAACTCCAGACACCAAAGTACCTACCAAGGCCTCAGGTTCAAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS CCA 90 bp | CTTGCTGAGGAAAGCTTGCAGCTTGGTAAATCTCTGAAGAAATTTTaGATCCAGGTTCAAGGTTGTGATGCTCCAGGGATAGCTTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: LAEESLQLGKSLKKF*IQVQGCDAPGIALN Trigger: GTTCAAAGCTATCCCTGGAGCATCACAACCTTGAACCTGGATCCAAAATTTCTTCAGAGATTTACCAAGCTGCAAGCTTTCCTCAGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS-3UTR CAA 90 bp | GGAAGTCCGTCTAATGTGGTAATGGCTACTTCAAGCCTTGATAAATCAATGACAATCTCTGAAGAAATTTaGGATCCAGGTTCAAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: GSPSNVVMATSSLDKSMTISEEI*DPGSRL Trigger: CAACCTTGAACCTGGATCCAAAATTTCTTCAGAGAT...TGTCATTGATTTATCAAGGCTTGAAGTAGCCATTACCACATTAGACGGACTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107977.4 |
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| CDS GCA 72 bp | GCGAGGCCCCGCAGGCACTGCGGCCTCTGTGGGGTCTaGCAGACTCCACGCGATGTCCGCGGGCGGCCGCGA | + |
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Preference number: 6 (lower is better) Translates to: ARPRRHCGLCGV*QTPRDVRGRPR Trigger: TCGCGGCCGCCCGCGGACATCGCGTGGAGTCTGGCAGACCCCACAGAGGCCGCAGTGCCTGCGGGGCCTCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS CCA 72 bp | GCAGGAGGCGAGGCCCCGCAGGCACTGCGGCCTCTGTaGGGTCTGCCAGACTCCACGCGATGTCCGCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: AGGEAPQALRPL*GLPDSTRCPRA Trigger: CGCCCGCGGACATCGCGTGGAGTCTGGCAGACCCCACAGAGGCCGCAGTGCCTGCGGGGCCTCGCCTCCTGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS CCA 72 bp | GGCACCGGTCCCGCTCGGACGCCTTCGGGAAGACCCTaGAACTGCAGGGAGGCGGCAGGGACCCCGCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: GTGPARTPSGRP*NCREAAGTPPG Trigger: GCCTGGCGGGGTCCCTGCCGCCTCCCTGCAGTTCCAGGGTCTTCCCGAAGGCGTCCGAGCGGGACCGGTGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS GCA 72 bp | CACAGCGGGCAGCAGGAGGCGAGGCCCCGCAGGCACTaGGGCCTCTGTGGGGTCTGCCAGACTCCACGCGAT | + |
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Preference number: 6 (lower is better) Translates to: HSGQQEARPRRH*GLCGVCQTPRD Trigger: ATCGCGTGGAGTCTGGCAGACCCCACAGAGGCCGCAGTGCCTGCGGGGCCTCGCCTCCTGCTGCCCGCTGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS CCA 72 bp | CTCCGGGCGGGCGGGGACAGTCACCAGGAGCGTAGATaGCACCGGTCCCGCTCGGACGCCTTCGGGAAGACC | + |
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Preference number: 6 (lower is better) Translates to: LRAGGDSHQERR*HRSRSDAFGKT Trigger: GGTCTTCCCGAAGGCGTCCGAGCGGGACCGGTGCCATCTACGCTCCTGGTGACTGTCCCCGCCCGCCCGGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS CCA 72 bp | GCGTGGTCGCTGCGTACCGGACGTGAGATGAGCAGCTaGTCCCGTTCTGTGCGGATGCGAGGTGGCTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: AWSLRTGREMSS*SRSVRMRGGSA Trigger: CGCAGAGCCACCTCGCATCCGCACAGAACGGGACCAGCTGCTCATCTCACGTCCGGTACGCAGCGACCACGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS CCA 72 bp | GCTGCAGCTTCGGTGTGGCCAAAGGGGCTTCGGACCTaGCAAGTGTACCGGGCGTGGTCGCTGCGTACCGGA | + |
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Preference number: 6 (lower is better) Translates to: AAASVWPKGLRT*QVYRAWSLRTG Trigger: TCCGGTACGCAGCGACCACGCCCGGTACACTTGCCAGGTCCGAAGCCCCTTTGGCCACACCGAAGCTGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS TCA 72 bp | TGTACCGGGCGTGGTCGCTGCGTACCGGACGTGAGATaGGCAGCTGGTCCCGTTCTGTGCGGATGCGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: CTGRGRCVPDVR*AAGPVLCGCEV Trigger: CACCTCGCATCCGCACAGAACGGGACCAGCTGCTCATCTCACGTCCGGTACGCAGCGACCACGCCCGGTACA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS TCA 72 bp | GCAAGTGTACCGGGCGTGGTCGCTGCGTACCGGACGTaGGATGAGCAGCTGGTCCCGTTCTGTGCGGATGCG | + |
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Preference number: 6 (lower is better) Translates to: ASVPGVVAAYRT*DEQLVPFCADA Trigger: CGCATCCGCACAGAACGGGACCAGCTGCTCATCTCACGTCCGGTACGCAGCGACCACGCCCGGTACACTTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS GCA 72 bp | GGATGCGAGGTGGCTCTGCGCCTTCAGGGTCTGAGGTaGCCAGGGCTCGTCCGTCTCTACTCCAGCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GCEVALRLQGLR*PGLVRLYSSSA Trigger: AGCTGAGCTGGAGTAGAGACGGACGAGCCCTGGGCACCTCAGACCCTGAAGGCGCAGAGCCACCTCGCATCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS CCA 72 bp | CCAAAGGGGCTTCGGACCTGGCAAGTGTACCGGGCGTaGTCGCTGCGTACCGGACGTGAGATGAGCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PKGLRTWQVYRA*SLRTGREMSSW Trigger: CCAGCTGCTCATCTCACGTCCGGTACGCAGCGACCACGCCCGGTACACTTGCCAGGTCCGAAGCCCCTTTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS GCA 72 bp | GACTCCTCCCCTGATGACCTCAACTGTGTACACCCCTaGATCATCCAGCCGGGCAGAGGTGAGTTCCAGACC | + |
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Preference number: 6 (lower is better) Translates to: DSSPDDLNCVHP*IIQPGRGEFQT Trigger: GGTCTGGAACTCACCTCTGCCCGGCTGGATGATGCAGGGGTGTACACAGTTGAGGTCATCAGGGGAGGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS CCA 72 bp | GCAGCTCGGCTGCTCCTTCTTCTGTCTCTGGCGCCCTaGGCTGTACTGACAACTGGGGCAAGGGCTCAAATA | + |
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Preference number: 6 (lower is better) Translates to: AARLLLLLSLAP*AVLTTGARAQI Trigger: TATTTGAGCCCTTGCCCCAGTTGTCAGTACAGCCCAGGGCGCCAGAGACAGAAGAAGGAGCAGCCGAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS CCA 72 bp | AGGCTGAAGTTGTTGATGAGGAGCTTTCGGCCATCCTaGCTAAGCTGTAGTCGGCCCCCACCACCTGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: RLKLLMRSFRPS*LSCSRPPPPGA Trigger: GGCTCCAGGTGGTGGGGGCCGACTACAGCTTAGCCAGGATGGCCGAAAGCTCCTCATCAACAACTTCAGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS CCA 72 bp | TGTGTCTCCTCTACTATGGGCTGGAGCAGCACTTCCTaGGGGGCTTCCGGGATGATCGTGCATGTACGTGTG | + |
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Preference number: 6 (lower is better) Translates to: CVSSTMGWSSTS*GASGMIVHVRV Trigger: CACACGTACATGCACGATCATCCCGGAAGCCCCCCAGGAAGTGCTGCTCCAGCCCATAGTAGAGGAGACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS TCA 72 bp | ACGAGGAAGGGAAGCCCAGAGTCTTTGTCAGGATCTTaGGAATCCAGGAGTAGGAAGGGCAGCAGAGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: TRKGSPESLSGS*ESRSRKGSRAH Trigger: GTGGGCTCTGCTGCCCTTCCTACTCCTGGATTCTCAAGATCCTGACAAAGACTCTGGGCTTCCCTTCCTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203769.2 |
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| CDS TCA 72 bp | AGACCCCCTCGAATCTGGTCAAATCTCAGGCGGGCTTaGTGCATGGGGTCCAGACTAATTAGTGGAGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: RPPRIWSNLRRA*CMGSRLISGAC Trigger: ACAGGCTCCACTAATTAGTCTGGACCCCATGCATCAAGCCCGCCTGAGATTTGACCAGATTCGAGGGGGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS GCA 72 bp | CATGGTGACTCTGTCCACTTCAGAGCTATCTGTCCATaGCTGGATGTGAAAGCCAGTGAGGAGAGTGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: HGDSVHFRAICP*LDVKASEESAS Trigger: CGAGGCACTCTCCTCACTGGCTTTCACATCCAGGCATGGACAGATAGCTCTGAAGTGGACAGAGTCACCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS TCA 72 bp | CCTGAGGCCTTGGTAGGTACTTTGGTGTCTGGAGTTTaGACTGATATTTGTGAAGCTGGAGTCTTGACGAGG | + |
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Preference number: 6 (lower is better) Translates to: PEALVGTLVSGV*TDICEAGVLTR Trigger: CCTCGTCAAGACTCCAGCTTCACAAATATCAGTTCAAACTCCAGACACCAAAGTACCTACCAAGGCCTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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| CDS CCA 72 bp | GAAAGCTTGCAGCTTGGTAAATCTCTGAAGAAATTTTaGATCCAGGTTCAAGGTTGTGATGCTCCAGGGATA | + |
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Preference number: 6 (lower is better) Translates to: ESLQLGKSLKKF*IQVQGCDAPGI Trigger: TATCCCTGGAGCATCACAACCTTGAACCTGGATCCAAAATTTCTTCAGAGATTTACCAAGCTGCAAGCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107977.4 ENSMUST00000203769.2 |
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