Pregenerated sensors for VSIG10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066894Ensembl transcript IDs: ENSMUST00000086464.8, ENSMUST00000111967.8
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAACAGGTCATAGCCATCCCCAAGGGCTCCCAATTCACAGCCAGGTaGACTCCTCCACACCCTGACCTCAGGGTGGGCCACAAGGGGAGC | + |
|
Preference number: 1 (lower is better) Translates to: EQVIAIPKGSQFTAR*TPPHPDLRVGHKGS Trigger: GCTCCCCTTGTGGCCCACCCTGAGGTCAGGGTGTGGAGGAGTCCACCTGGCTGTGAATTGGGAGCCCTTGGGGATGGCTATGACCTGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR TCA 90 bp | CCCCAAGGGCTCCCAATTCACAGCCAGGTGGACTCCTCCACACCCTaGCCTCAGGGTGGGCCACAAGGGGAGCGGTTTCTTCACTTTAGC | + |
|
Preference number: 1 (lower is better) Translates to: PQGLPIHSQVDSSTP*PQGGPQGERFLHFS Trigger: GCTAAAGTGAAGAAACCGCTCCCCTTGTGGCCCACCCTGAGGTCAGGGTGTGGAGGAGTCCACCTGGCTGTGAATTGGGAGCCCTTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR GCA 90 bp | TCAGTATCACAGCCAAGTGGGCCCCTCAGACTCCACTACGGCCACTaGAGCTTTGCCCCACACCGGCTGCTCCTTCTCAGTGCACTTCAC | + |
|
Preference number: 1 (lower is better) Translates to: SVSQPSGPLRLHYGH*SFAPHRLLLLSALH Trigger: GTGAAGTGCACTGAGAAGGAGCAGCCGGTGTGGGGCAAAGCTGCAGTGGCCGTAGTGGAGTCTGAGGGGCCCACTTGGCTGTGATACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| 3UTR CCA 90 bp | ACCCCTCCCCTCTGCCAGGAAGGTTCCTCATGTCCATATTCGTGTTaGGTAAGCTGTCTACAAACCTTGACTAATGGCACAGTGCACAGG | + |
|
Preference number: 1 (lower is better) Translates to: TPPLCQEGSSCPYSC*VSCLQTLTNGTVHR Trigger: CCTGTGCACTGTGCCATTAGTCAAGGTTTGTAGACAGCTTACCCAACACGAATATGGACATGAGGAACCTTCCTGGCAGAGGGGAGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR CCA 90 bp | GCCTTGAGATCTGGGTATGGATGGCATCAACGGAAAGAAGGGATGTaGGCTCCAGTTTTTAACAAAGCCTTAAAACAAAGCCCTTGGTGC | + |
|
Preference number: 1 (lower is better) Translates to: ALRSGYGWHQRKEGM*APVFNKALKQSPWC Trigger: GCACCAAGGGCTTTGTTTTAAGGCTTTGTTAAAAACTGGAGCCCACATCCCTTCTTTCCGTTGATGCCATCCATACCCAGATCTCAAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR GCA 90 bp | GAGTGCAAATTTCAAGTCAGATTTTCATGGTTAGTACAGACCTACTaGACCCTTAGAAGATCCCTGACTTCAGAATGTTTAGATGAAATT | + |
|
Preference number: 1 (lower is better) Translates to: ECKFQVRFSWLVQTY*TLRRSLTSECLDEI Trigger: AATTTCATCTAAACATTCTGAAGTCAGGGATCTTCTAAGGGTGCAGTAGGTCTGTACTAACCATGAAAATCTGACTTGAAATTTGCACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR CAA 90 bp | CACAGCCAAGTGGGCCCCTCAGACTCCACTACGGCCACTGCAGCTTaGCCCCACACCGGCTGCTCCTTCTCAGTGCACTTCACACTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: HSQVGPSDSTTATAA*PHTGCSFSVHFTLL Trigger: CAGCAGTGTGAAGTGCACTGAGAAGGAGCAGCCGGTGTGGGGCAAAGCTGCAGTGGCCGTAGTGGAGTCTGAGGGGCCCACTTGGCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTGCAGCTTTGCCCCACACCGGCTGCTCCTTCTCAGTGCACTTCACACTGCTGATGCTGTGCCTGTGCTaGAGAGACCCCAGCAGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: TAALPHTGCSFSVHFTLLMLCLC*RDPSSP Trigger: GGGACTGCTGGGGTCTCTGCAGCACAGGCACAGCAT...CAGCAGTGTGAAGTGCACTGAGAAGGAGCAGCCGGTGTGGGGCAAAGCTGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTGTCCTGTCTGAGCAGGATGTGCCCAAGAGATGTACCCAAGTACAGAGTGCAGAAGAAGAGATGCTGTaGCTGTGCTGCAGAGACCCC | + |
|
Preference number: 2 (lower is better) Translates to: LVLSEQDVPKRCTQVQSAEEEML*LCCRDP Trigger: GGGGTCTCTGCAGCACAGGCACAGCATCTCTTCTTC...TGCACTCTGTACTTGGGTACATCTCTTGGGCACATCCTGCTCAGACAGGACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTTCTGTTAACCAGCTCCACAGGAAACCTCCGGCCCCAGTGTTAGGAAGTCCTGAAGTCAGTGGGAGATaGCAGACGGAAGAAGAGATG | + |
|
Preference number: 2 (lower is better) Translates to: TSVNQLHRKPPAPVLGSPEVSGR*QTEEEM Trigger: CATCTCTTCTTCCGTCTGTCATCTCCCACTGACTTC...AGGACTTCCTAACACTGGGGCCGGAGGTTTCCTGTGGAGCTGGTTAACAGAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR-3UTR TCA 90 bp | ACGTTGACCCATCTGCAGTTTTTCTTTGCAGTAGCTGGTAGCCAGTTCTGTGGTTCTGCCTGTACACCGTaGAGGAGAGGAGAGGTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: TLTHLQFFFAVAGSQFCGSACTP*RRGEVQ Trigger: TTGCACCTCTCCTCTCCTTCACGGTGTACAGGCAGA...ACCACAGAACTGGCTACCAGCTACTGCAAAGAAAAACTGCAGATGGGTCAACGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGGTAAGGTCAACCACGTTGACCCATCTGCAGTTTTTCTTTGCAGTAGCTGGTACCAGCTCGAAGGACTaGAGGCAACCTGAGTATCCC | + |
|
Preference number: 2 (lower is better) Translates to: MVRSTTLTHLQFFFAVAGTSSKD*RQPEYP Trigger: GGGATACTCAGGTTGCCTTCAGTCCTTCGAGCTGGT...ACCAGCTACTGCAAAGAAAAACTGCAGATGGGTCAACGTGGTTGACCTTACCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR-3UTR TCA 90 bp | ACGTTGACCCATCTGCAGTTTTTCTTTGCAGTAGCTGGTAGCCAGTTCTGTGGTTCGGCACCAAGCCCTTaGAGCTCTCATTTGCTAGTG | + |
|
Preference number: 2 (lower is better) Translates to: TLTHLQFFFAVAGSQFCGSAPSP*SSHLLV Trigger: CACTAGCAAATGAGAGCTTCAAGGGCTTGGTGCCGA...ACCACAGAACTGGCTACCAGCTACTGCAAAGAAAAACTGCAGATGGGTCAACGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTTCTGTTAACCAGCTCCACAGGAAACCTCCGGCCCCAGTGTTAGGAAGTCCTTCACAGTACATCACCTaGGTAGAGTCAGTATCACAG | + |
|
Preference number: 2 (lower is better) Translates to: TSVNQLHRKPPAPVLGSPSQYIT*VESVSQ Trigger: CTGTGATACTGACTCTACCCAGGTGATGTACTGTGA...AGGACTTCCTAACACTGGGGCCGGAGGTTTCCTGTGGAGCTGGTTAACAGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR-3UTR GCA 90 bp | TACGAAATGGTAAGGTCAACCACGTTGACCCATCTGCAGTTTTTCTTTGCAGTACTGACCCCTCCCCTCTaGCAGGAAGGTTCCTCATGT | + |
|
Preference number: 2 (lower is better) Translates to: YEMVRSTTLTHLQFFFAVLTPPL*QEGSSC Trigger: ACATGAGGAACCTTCCTGGCAGAGGGGAGGGGTCAG...TACTGCAAAGAAAAACTGCAGATGGGTCAACGTGGTTGACCTTACCATTTCGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR CAA 90 bp | CCATGTTCCCAGATAGCCGCTTCCCCTCTAACTTCTCTTTTAAAGTaGCCTCTGAGTTGCAGACAAACTCAGGAACTCTTGTCATCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: PCSQIAASPLTSLLK*PLSCRQTQELLSSG Trigger: GCCTGATGACAAGAGTTCCTGAGTTTGTCTGCAACTCAGAGGCAACTTTAAAAGAGAAGTTAGAGGGGAAGCGGCTATCTGGGAACATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGGTAAGGTCAACCACGTTGACCCATCTGCAGTTTTTCTTTGCAGTAGCTGGTGCTTTCATAACCAGATaGAGCTCTGCCTGTACACCG | + |
|
Preference number: 2 (lower is better) Translates to: MVRSTTLTHLQFFFAVAGAFITR*SSACTP Trigger: CGGTGTACAGGCAGAGCTGCATCTGGTTATGAAAGC...ACCAGCTACTGCAAAGAAAAACTGCAGATGGGTCAACGTGGTTGACCTTACCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTTCTGTTAACCAGCTCCACAGGAAACCTCCGGCCCCAGTGTTAGGAAGTCCTCAAGTCAGATTTTCATaGTTAGTACAGACCTACTGC | + |
|
Preference number: 2 (lower is better) Translates to: TSVNQLHRKPPAPVLGSPQVRFS*LVQTYC Trigger: GCAGTAGGTCTGTACTAACCATGAAAATCTGACTTG...AGGACTTCCTAACACTGGGGCCGGAGGTTTCCTGTGGAGCTGGTTAACAGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR CAA 90 bp | GATAGCCGCTTCCCCTCTAACTTCTCTTTTAAAGTTGCCTCTGAGTaGCAGACAAACTCAGGAACTCTTGTCATCAGGCTTCAAAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: DSRFPSNFSFKVASE*QTNSGTLVIRLQRK Trigger: TTTCCTTTGAAGCCTGATGACAAGAGTTCCTGAGTTTGTCTGCAACTCAGAGGCAACTTTAAAAGAGAAGTTAGAGGGGAAGCGGCTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR CAA 90 bp | AGAACCCAGCTGTCCCAAGCTAAAGTCATCACCCACTATTTTCTTTaGAAACTTACTGGCCCAGTAAGTAGGATGGAAACATATACTCCC | + |
|
Preference number: 2 (lower is better) Translates to: RTQLSQAKVITHYFL*KLTGPVSRMETYTP Trigger: GGGAGTATATGTTTCCATCCTACTTACTGGGCCAGTAAGTTTCAAAAGAAAATAGTGGGTGATGACTTTAGCTTGGGACAGCTGGGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR GCA 72 bp | CAGCCAAGTGGGCCCCTCAGACTCCACTACGGCCACTaGAGCTTTGCCCCACACCGGCTGCTCCTTCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: QPSGPLRLHYGH*SFAPHRLLLLS Trigger: ACTGAGAAGGAGCAGCCGGTGTGGGGCAAAGCTGCAGTGGCCGTAGTGGAGTCTGAGGGGCCCACTTGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| 3UTR CCA 72 bp | CCAGTCCCCAATCAGTGTCTGTCACAGTACATCACCTaGGTAGAGTCAGTATCACAGCCAAGTGGGCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PVPNQCLSQYIT*VESVSQPSGPL Trigger: GAGGGGCCCACTTGGCTGTGATACTGACTCTACCCAGGTGATGTACTGTGACAGACACTGATTGGGGACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| 3UTR TCA 72 bp | GCTTTCATAACCAGATGCAGCTCTGCCTGTACACCGTaGAGGAGAGGAGAGGTGCAATCCTCTCTAGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: AFITRCSSACTP*RRGEVQSSLGE Trigger: TTCCCCTAGAGAGGATTGCACCTCTCCTCTCCTTCACGGTGTACAGGCAGAGCTGCATCTGGTTATGAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR TCA 72 bp | CAAAGGAAAGACCAGCTCGAAGGACTGAAGGCAACCTaGGTATCCCACCACGAAATGACAGAGTGCCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: QRKDQLEGLKAT*VSHHEMTECLR Trigger: CCTCAGGCACTCTGTCATTTCGTGGTGGGATACTCAGGTTGCCTTCAGTCCTTCGAGCTGGTCTTTCCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR GCA 72 bp | GTTCGTCACTTAGGCTTTCATAACCAGATGCAGCTCTaGCTGTACACCGTGAAGGAGAGGAGAGGTGCAATC | + |
|
Preference number: 3 (lower is better) Translates to: VRHLGFHNQMQL*LYTVKERRGAI Trigger: GATTGCACCTCTCCTCTCCTTCACGGTGTACAGGCAGAGCTGCATCTGGTTATGAAAGCCTAAGTGACGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR TCA 72 bp | AGTCCAAATGGACCGTGTGTCCAGTTCGTTATCAGGTaGTGCTCTGTTAGCACAGGAGACATGAGGAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SPNGPCVQFVIR*CSVSTGDMRKE Trigger: CTCTTTCCTCATGTCTCCTGTGCTAACAGAGCATCACCTGATAACGAACTGGACACACGGTCCATTTGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR CCA 72 bp | CTCTGCCAGGAAGGTTCCTCATGTCCATATTCGTGTTaGGTAAGCTGTCTACAAACCTTGACTAATGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: LCQEGSSCPYSC*VSCLQTLTNGT Trigger: TGTGCCATTAGTCAAGGTTTGTAGACAGCTTACCCAACACGAATATGGACATGAGGAACCTTCCTGGCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR CCA 72 bp | GCATTTAACACATATGCCTTGAGATCTGGGTATGGATaGCATCAACGGAAAGAAGGGATGTGGGCTCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: AFNTYALRSGYG*HQRKEGMWAPV Trigger: AACTGGAGCCCACATCCCTTCTTTCCGTTGATGCCATCCATACCCAGATCTCAAGGCATATGTGTTAAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR-3UTR CAA 90 bp | ACGTTGACCCATCTGCAGTTTTTCTTTGCAGTAGCTGGTAGCCAGTTCTGTGGTACTTCTCTTTTAAAGTaGCCTCTGAGTTGCAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: TLTHLQFFFAVAGSQFCGTSLLK*PLSCRQ Trigger: TTGTCTGCAACTCAGAGGCAACTTTAAAAGAGAAGT...ACCACAGAACTGGCTACCAGCTACTGCAAAGAAAAACTGCAGATGGGTCAACGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR GCA 72 bp | TCCCCTCTAACTTCTCTTTTAAAGTTGCCTCTGAGTTaGAGACAAACTCAGGAACTCTTGTCATCAGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SPLTSLLKLPLS*RQTQELLSSGF Trigger: GAAGCCTGATGACAAGAGTTCCTGAGTTTGTCTGCAACTCAGAGGCAACTTTAAAAGAGAAGTTAGAGGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR CCA 72 bp | TCTGGGTATGGATGGCATCAACGGAAAGAAGGGATGTaGGCTCCAGTTTTTAACAAAGCCTTAAAACAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SGYGWHQRKEGM*APVFNKALKQS Trigger: GCTTTGTTTTAAGGCTTTGTTAAAAACTGGAGCCCACATCCCTTCTTTCCGTTGATGCCATCCATACCCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR-3UTR CAA 90 bp | TACGAAATGGTAAGGTCAACCACGTTGACCCATCTGCAGTTTTTCTTTGCAGTAATGTCCATATTCGTGTaGGGTAAGCTGTCTACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: YEMVRSTTLTHLQFFFAVMSIFV*GKLSTN Trigger: GTTTGTAGACAGCTTACCCAACACGAATATGGACAT...TACTGCAAAGAAAAACTGCAGATGGGTCAACGTGGTTGACCTTACCATTTCGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR TCA 72 bp | GCACAAATTGTACTTTGGCATTTAACACATATGCCTTaGGATCTGGGTATGGATGGCATCAACGGAAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: AQIVLWHLTHMP*DLGMDGINGKK Trigger: CTTCTTTCCGTTGATGCCATCCATACCCAGATCTCAAGGCATATGTGTTAAATGCCAAAGTACAATTTGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCCCACCTGGGAGCCCCTaGCTGCGTACAGCGTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: AVPVLQRPQQSLTQAPQGPPGSP*LRTACR Trigger: ACGGCACGCTGTACGCAGCCAGGGGCTCCCAGGTGG...GCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCAGCACCGGCACTGCAGCAGTTaGAGTCCACCTGGGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ACAAETPAVPNTSSPGQHRHCSS*SPPGSP Trigger: GGGGCTCCCAGGTGGACTTCAACTGCTGCAGTGCCG...GTGCTGCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR TCA 90 bp | AGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCAGCACGGTGAGATGGGGGGGATGGCGGGCTGCGTaGGGTTCCTCAGCCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RPQQSLTQAPQGSTVRWGGWRAA*GSSATG Trigger: TCCAGTGGCTGAGGAACCTCACGCAGCCCGCCATCC...CCCCCATCTCACCGTGCTGCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCT 66% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCAGCTGGGAGCCCCTGGCTaGGTACAGCGTGCCGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CACAAETPAVPNTSSPGQLGAPG*VQRAVG Trigger: CCCAACGGCACGCTGTACGCAGCCAGGGGCTCCCAG...CTGCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCAGCGTAGGCAGGGCCACTaGCCACCCGAAGACGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CACAAETPAVPNTSSPGQRRQGH*PPEDAQ Trigger: CTGTGCGTCTTCGGGTGGCCAGTGGCCCTGCCTACG...CTGCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCAGCGTACAGCGTGCCGTTaGGGAGGGTGCCAGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CACAAETPAVPNTSSPGQRTACR*GGCQWL Trigger: CAGCCACTGGCACCCTCCCCAACGGCACGCTGTACG...CTGCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| 3UTR CAA 72 bp | GTGGGCCCCTCAGACTCCACTACGGCCACTGCAGCTTaGCCCCACACCGGCTGCTCCTTCTCAGTGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VGPSDSTTATAA*PHTGCSFSVHF Trigger: GAAGTGCACTGAGAAGGAGCAGCCGGTGTGGGGCAAAGCTGCAGTGGCCGTAGTGGAGTCTGAGGGGCCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCTTGCCCTCCAACAGCTaGGCCGGGCTCAGTGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AVPVLQRPQQSLTQAPQGLPSNS*AGLSVC Trigger: GCAAACACTGAGCCCGGCGCAGCTGTTGGAGGGCAA...GCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCAGCTTTGCCCCACACCGGCTGCTCCTTCTCAGTGCACTTCACACTGCTGCGGCACTGCAGCAGTTaGAGTCCACCTGGGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TAALPHTGCSFSVHFTLLRHCSS*SPPGSP Trigger: GGGGCTCCCAGGTGGACTTCAACTGCTGCAGTGCCG...CAGCAGTGTGAAGTGCACTGAGAAGGAGCAGCCGGTGTGGGGCAAAGCTGCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCAGCTTTGCCCCACACCGGCTGCTCCTTCTCAGTGCACTTCACACTGCTGCGTAGGCAGGGCCACTaGCCACCCGAAGACGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TAALPHTGCSFSVHFTLLRRQGH*PPEDAQ Trigger: CTGTGCGTCTTCGGGTGGCCAGTGGCCCTGCCTACG...CAGCAGTGTGAAGTGCACTGAGAAGGAGCAGCCGGTGTGGGGCAAAGCTGCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCAGCACAGACCAGGAGCTCGGTaGTCACCTTTCGCTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ACAAETPAVPNTSSPGQHRPGAR*SPFAVS Trigger: GGAGACAGCGAAAGGTGACCACCGAGCTCCTGGTCT...GTGCTGCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR TCA 90 bp | GCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCAGCAGTTGTGGATGGTaGGAGAGGAGCTTTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AVPVLQRPQQSLTQAPQGSSCGW*ERSFGP Trigger: AGGGCCAAAGCTCCTCTCTCACCATCCACAACTGCT...GCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR TCA 90 bp | GCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCGGCTTGCCATCCTCTTaGACAATGCCACTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AVPVLQRPQQSLTQAPQGGLPSS*TMPLCC Trigger: GCAGCAGAGTGGCATTGTTCAAGAGGATGGCAAGCC...GCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | TGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCAGAGACCAGGAGCTCGGTaGTCACCTTTCGCTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CACAAETPAVPNTSSPGQRPGAR*SPFAVS Trigger: GGAGACAGCGAAAGGTGACCACCGAGCTCCTGGTCT...CTGCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR TCA 90 bp | GACAGACGGAAGAAGAGATGCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTGAGGGAGGCTGGAATTaGAGGAGACCAGGAAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DRRKKRCCACAAETPAVPEGGWN*RRPGRR Trigger: CCGCCTTCCTGGTCTCCTTCAATTCCAGCCTCCCTC...AGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGCATCTCTTCTTCCGTCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR TCA 90 bp | GTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCAGCGCTTTGAGTTCCCCATaGTCGTTCCTCCAGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VPVLQRPQQSLTQAPQGSALSSP*SFLQVP Trigger: AGGAACCTGGAGGAACGATCATGGGGAACTCAAAGC...GCTGCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGAGATGCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTGGATGGCGGGCTGCGTaGGGTTCCTCAGCCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRDAVPVLQRPQQSLTQAGWRAA*GSSATG Trigger: TCCAGTGGCTGAGGAACCTCACGCAGCCCGCCATCC...AGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGCATCTCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCCAACCAGATGTTTGTTaGCCTCACCCCCACGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AVPVLQRPQQSLTQAPQGQPDVC*PHPHEV Trigger: AACCTCGTGGGGGTGAGGGCAACAAACATCTGGTTG...GCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCAGCACGGTTCCCAACGCATTTaGACTTCTTGCCCTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: ACAAETPAVPNTSSPGQHGSQRI*TSCPPT Trigger: TGTTGGAGGGCAAGAAGTTCAAATGCGTTGGGAACC...GTGCTGCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCAGCCTGGCAGGTGTAGTTaGCGTCATCCTCTAGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CACAAETPAVPNTSSPGQPGRCS*RHPLVS Trigger: TGAGACTAGAGGATGACGGCAACTACACCTGCCAGG...CTGCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR GCA 90 bp | CTTGTCCTGTCTGAGCAGGATGTGCCCAAGAGATGTACCCAAGTACAGAGTGCACTGGGAGCCCCTGGCTaGGTACAGCGTGCCGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVLSEQDVPKRCTQVQSALGAPG*VQRAVG Trigger: CCCAACGGCACGCTGTACGCAGCCAGGGGCTCCCAG...TGCACTCTGTACTTGGGTACATCTCTTGGGCACATCCTGCTCAGACAGGACAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCCTGAGCACGTGTAGTTaGCTTGGAGGTTTTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: AVPVLQRPQQSLTQAPQGLSTCS*LGGFGT Trigger: TGTCCCAAAACCTCCAAGGCAACTACACGTGCTCAG...GCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR GCA 90 bp | TGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCAGCAACCAGATGTTTGTTaGCCTCACCCCCACGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CACAAETPAVPNTSSPGQQPDVC*PHPHEV Trigger: AACCTCGTGGGGGTGAGGGCAACAAACATCTGGTTG...CTGCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | CCACACCAAATGAAGTCAGTGGGAGATGACAGACGGAAGAAGAGATGCTGTGCCCCACCTGGGAGCCCCTaGCTGCGTACAGCGTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PHQMKSVGDDRRKKRCCAPPGSP*LRTACR Trigger: ACGGCACGCTGTACGCAGCCAGGGGCTCCCAGGTGG...GGCACAGCATCTCTTCTTCCGTCTGTCATCTCCCACTGACTTCATTTGGTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | GACAGACGGAAGAAGAGATGCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAGGTTCCTCAGCCACTaGATCCTCGCAGGTGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DRRKKRCCACAAETPAVPRFLSH*ILAGGL Trigger: CAACCCACCTGCGAGGATCCAGTGGCTGAGGAACCT...AGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGCATCTCTTCTTCCGTCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCAGCACTCCTGTGAGCAGTTGTaGATGGTGAGAGAGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ACAAETPAVPNTSSPGQHSCEQL*MVREEL Trigger: AAGCTCCTCTCTCACCATCCACAACTGCTCACAGGA...GTGCTGCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR TCA 90 bp | GACAGACGGAAGAAGAGATGCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAGCAGTTGTGGATGGTaGGAGAGGAGCTTTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DRRKKRCCACAAETPAVPSSCGW*ERSFGP Trigger: AGGGCCAAAGCTCCTCTCTCACCATCCACAACTGCT...AGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGCATCTCTTCTTCCGTCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR TCA 90 bp | GTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCAGCAATCCACCAAAACCATaGCATCACCCATGTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VPVLQRPQQSLTQAPQGSNPPKP*HHPCPV Trigger: GACAGGACATGGGTGATGTCATGGTTTTGGTGGATT...GCTGCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR TCA 90 bp | TTCACAGCCAGGTGGACTCCTCCACACCCTGACCTCAGGGTGGGCCACAAGGGGAATCCACCAAAACCATaGCATCACCCATGTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FTARWTPPHPDLRVGHKGNPPKP*HHPCPV Trigger: GACAGGACATGGGTGATGTCATGGTTTTGGTGGATT...CCCCTTGTGGCCCACCCTGAGGTCAGGGTGTGGAGGAGTCCACCTGGCTGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| CDS-3UTR TCA 90 bp | GTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCAGCCCATCACTGTCATCCTaGAACTCCTGGAATCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: VPVLQRPQQSLTQAPQGSPSLSS*NSWNPF Trigger: GAATGGATTCCAGGAGTTTCAGGATGACAGTGATGG...GCTGCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGAAGAGATGCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAATTGCCCTCCAACAGCTaGGCCGGGCTCAGTGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRRDAVPVLQRPQQSLTQLPSNS*AGLSVC Trigger: GCAAACACTGAGCCCGGCGCAGCTGTTGGAGGGCAA...TTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGCATCTCTTCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR GCA 90 bp | CCACACCAAATGAAGTCAGTGGGAGATGACAGACGGAAGAAGAGATGCTGTGCCGGCTGGATGGCGGGCTaGGTGAGGTTCCTCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PHQMKSVGDDRRKKRCCAGWMAG*VRFLSH Trigger: GTGGCTGAGGAACCTCACGCAGCCCGCCATCCAGCC...GGCACAGCATCTCTTCTTCCGTCTGTCATCTCCCACTGACTTCATTTGGTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | GACAGACGGAAGAAGAGATGCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTCGCACAGGGAACCAGTaGGTCTCATTCAGAACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DRRKKRCCACAAETPAVPRTGNQ*VSFRTS Trigger: GGAGGTTCTGAATGAGACCCACTGGTTCCCTGTGCG...AGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGCATCTCTTCTTCCGTCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGAGATGCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCAGTTGAAGTCCACCTaGGAGCCCCTGGCTGCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RRDAVPVLQRPQQSLTQAQLKST*EPLAAY Trigger: GTACGCAGCCAGGGGCTCCCAGGTGGACTTCAACTG...AGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGCATCTCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | AGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCAGCACGGTGAGATGGGGGTCAGGTCCCAGTATGTaGTTCCCAACGCATTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RPQQSLTQAPQGSTVRWGSGPSM*FPTHLN Trigger: GTTCAAATGCGTTGGGAACCACATACTGGGACCTGA...CCCCCATCTCACCGTGCTGCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCAGCTTTGCCCCACACCGGCTGCTCCTTCTCAGTGCACTTCACACTGCTGGTGAGAGAGGAGCTTTaGCCCTGCTGGGTGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: TAALPHTGCSFSVHFTLLVREEL*PCWVMM Trigger: CATCATCACCCAGCAGGGCCAAAGCTCCTCTCTCAC...CAGCAGTGTGAAGTGCACTGAGAAGGAGCAGCCGGTGTGGGGCAAAGCTGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCAGCTTTGCCCCACACCGGCTGCTCCTTCTCAGTGCACTTCACACTGCTGGGCTGTAATACAGAGTaGGGCCTGAAACAACGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TAALPHTGCSFSVHFTLLGCNTE*GLKQRP Trigger: TGGCCGTTGTTTCAGGCCTCACTCTGTATTACAGCC...CAGCAGTGTGAAGTGCACTGAGAAGGAGCAGCCGGTGTGGGGCAAAGCTGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR GCA 90 bp | GACAGACGGAAGAAGAGATGCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTCCTGGCAGGTGTAGTTaGCGTCATCCTCTAGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DRRKKRCCACAAETPAVPPGRCS*RHPLVS Trigger: TGAGACTAGAGGATGACGGCAACTACACCTGCCAGG...AGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGCATCTCTTCTTCCGTCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTTCTCAGTGCACTTCACACTGCTGAGGTGAACCCACACCAAATGAAGTCAGGCTGGATGGCGGGCTaGGTGAGGTTCCTCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLSALHTAEVNPHQMKSGWMAG*VRFLSH Trigger: GTGGCTGAGGAACCTCACGCAGCCCGCCATCCAGCC...TGACTTCATTTGGTGTGGGTTCACCTCAGCAGTGTGAAGTGCACTGAGAAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGAGATGCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTAACTCCGGGATGCTGTaGGTCTGGATCCACCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRDAVPVLQRPQQSLTQANSGML*VWIHHS Trigger: GGAGTGGTGGATCCAGACCCACAGCATCCCGGAGTT...AGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGCATCTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCGAATGTGTCCATGCTTaGTTATCCCTTTTGGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: AVPVLQRPQQSLTQAPQGECVHA*LSLLAT Trigger: AGTTGCCAAAAGGGATAAGCAAGCATGGACACATTC...GCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | CCACACCAAATGAAGTCAGTGGGAGATGACAGACGGAAGAAGAGATGCTGTGCCCAGTTGAAGTCCACCTaGGAGCCCCTGGCTGCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PHQMKSVGDDRRKKRCCAQLKST*EPLAAY Trigger: GTACGCAGCCAGGGGCTCCCAGGTGGACTTCAACTG...GGCACAGCATCTCTTCTTCCGTCTGTCATCTCCCACTGACTTCATTTGGTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCAGCTTTGCCCCACACCGGCTGCTCCTTCTCAGTGCACTTCACACTGCTGTTGCCTTGGAGGTTTTaGGACATGAGCATCAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TAALPHTGCSFSVHFTLLLPWRF*DMSISV Trigger: CACGCTGATGCTCATGTCCCAAAACCTCCAAGGCAA...CAGCAGTGTGAAGTGCACTGAGAAGGAGCAGCCGGTGTGGGGCAAAGCTGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | GACAGACGGAAGAAGAGATGCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTTCCTGTGAGCAGTTGTaGATGGTGAGAGAGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DRRKKRCCACAAETPAVPSCEQL*MVREEL Trigger: AAGCTCCTCTCTCACCATCCACAACTGCTCACAGGA...AGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGCATCTCTTCTTCCGTCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | AGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCAGCACGGTGAGATGGGGGCTTGCTTATCCCTTTTaGCAACTCCTCTGTCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: RPQQSLTQAPQGSTVRWGLAYPF*QLLCLI Trigger: AATGAGACAGAGGAGTTGCCAAAAGGGATAAGCAAG...CCCCCATCTCACCGTGCTGCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAGAGATGCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCGGCTGTAATACAGAGTaGGGCCTGAAACAACGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KKRCCACAAETPAVPNTSGCNTE*GLKQRP Trigger: TGGCCGTTGTTTCAGGCCTCACTCTGTATTACAGCC...GCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGCATCTCTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTCCTGTCTGAGCAGGATGTGCCCAAGAGATGTACCCAAGTACAGAGTGCAAACTCCGGGATGCTGTaGGTCTGGATCCACCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVLSEQDVPKRCTQVQSANSGML*VWIHHS Trigger: GGAGTGGTGGATCCAGACCCACAGCATCCCGGAGTT...TGCACTCTGTACTTGGGTACATCTCTTGGGCACATCCTGCTCAGACAGGACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTCCTGTCTGAGCAGGATGTGCCCAAGAGATGTACCCAAGTACAGAGTGCAAGGTTCCTCAGCCACTaGATCCTCGCAGGTGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVLSEQDVPKRCTQVQSARFLSH*ILAGGL Trigger: CAACCCACCTGCGAGGATCCAGTGGCTGAGGAACCT...TGCACTCTGTACTTGGGTACATCTCTTGGGCACATCCTGCTCAGACAGGACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| CDS-3UTR TCA 90 bp | ACTTCTGTTAACCAGCTCCACAGGAAACCTCCGGCCCCAGTGTTAGGAAGTCCTGGTTCCCAACGCATTTaGACTTCTTGCCCTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: TSVNQLHRKPPAPVLGSPGSQRI*TSCPPT Trigger: TGTTGGAGGGCAAGAAGTTCAAATGCGTTGGGAACC...AGGACTTCCTAACACTGGGGCCGGAGGTTTCCTGTGGAGCTGGTTAACAGAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| CDS-3UTR TCA 90 bp | CCACACCAAATGAAGTCAGTGGGAGATGACAGACGGAAGAAGAGATGCTGTGCCTTCATCCAGGTCCTGTaGGCAGTTGTGGATGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PHQMKSVGDDRRKKRCCAFIQVL*AVVDGE Trigger: CTCACCATCCACAACTGCTCACAGGACCTGGATGAA...GGCACAGCATCTCTTCTTCCGTCTGTCATCTCCCACTGACTTCATTTGGTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGAGATGCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCATCACTGTCATCCTaGAACTCCTGGAATCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: RRDAVPVLQRPQQSLTQAPSLSS*NSWNPF Trigger: GAATGGATTCCAGGAGTTTCAGGATGACAGTGATGG...AGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGCATCTCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTTCTCAGTGCACTTCACACTGCTGAGGTGAACCCACACCAAATGAAGTCAGGCTTGCCATCCTCTTaGACAATGCCACTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLSALHTAEVNPHQMKSGLPSS*TMPLCC Trigger: GCAGCAGAGTGGCATTGTTCAAGAGGATGGCAAGCC...TGACTTCATTTGGTGTGGGTTCACCTCAGCAGTGTGAAGTGCACTGAGAAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR GCA 90 bp | GACAGACGGAAGAAGAGATGCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTGAATGTGTCCATGCTTaGTTATCCCTTTTGGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: DRRKKRCCACAAETPAVPECVHA*LSLLAT Trigger: AGTTGCCAAAAGGGATAAGCAAGCATGGACACATTC...AGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGCATCTCTTCTTCCGTCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR TCA 90 bp | GGCCCAGTAAGTAGGATGGAAACATATACTCCCATTTCCAGAACACAGACACTAGAGGGAGGCTGGAATTaGAGGAGACCAGGAAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GPVSRMETYTPISRTQTLEGGWN*RRPGRR Trigger: CCGCCTTCCTGGTCTCCTTCAATTCCAGCCTCCCTC...TAGTGTCTGTGTTCTGGAAATGGGAGTATATGTTTCCATCCTACTTACTGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| CDS-3UTR TCA 90 bp | ATGGTAAGGTCAACCACGTTGACCCATCTGCAGTTTTTCTTTGCAGTAGCTGGTTTCATCCAGGTCCTGTaGGCAGTTGTGGATGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: MVRSTTLTHLQFFFAVAGFIQVL*AVVDGE Trigger: CTCACCATCCACAACTGCTCACAGGACCTGGATGAA...ACCAGCTACTGCAAAGAAAAACTGCAGATGGGTCAACGTGGTTGACCTTACCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTTCTCAGTGCACTTCACACTGCTGAGGTGAACCCACACCAAATGAAGTCATCAGGTCCCAGTATGTaGTTCCCAACGCATTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLSALHTAEVNPHQMKSSGPSM*FPTHLN Trigger: GTTCAAATGCGTTGGGAACCACATACTGGGACCTGA...TGACTTCATTTGGTGTGGGTTCACCTCAGCAGTGTGAAGTGCACTGAGAAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| 3UTR CAA 72 bp | TGTCCATATTCGTGTTGGGTAAGCTGTCTACAAACCTaGACTAATGGCACAGTGCACAGGTACCAAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CPYSCWVSCLQT*TNGTVHRYQVP Trigger: GGGCACTTGGTACCTGTGCACTGTGCCATTAGTCAAGGTTTGTAGACAGCTTACCCAACACGAATATGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | TACGAAATGGTAAGGTCAACCACGTTGACCCATCTGCAGTTTTTCTTTGCAGTACGCACAGGGAACCAGTaGGTCTCATTCAGAACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YEMVRSTTLTHLQFFFAVRTGNQ*VSFRTS Trigger: GGAGGTTCTGAATGAGACCCACTGGTTCCCTGTGCG...TACTGCAAAGAAAAACTGCAGATGGGTCAACGTGGTTGACCTTACCATTTCGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTTCTCAGTGCACTTCACACTGCTGAGGTGAACCCACACCAAATGAAGTCACTTGCTTATCCCTTTTaGCAACTCCTCTGTCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: LLLSALHTAEVNPHQMKSLAYPF*QLLCLI Trigger: AATGAGACAGAGGAGTTGCCAAAAGGGATAAGCAAG...TGACTTCATTTGGTGTGGGTTCACCTCAGCAGTGTGAAGTGCACTGAGAAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| 3UTR CAA 72 bp | AAGTTGCCTCTGAGTTGCAGACAAACTCAGGAACTCTaGTCATCAGGCTTCAAAGGAAAGACCAGCTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLPLSCRQTQEL*SSGFKGKTSSK Trigger: CTTCGAGCTGGTCTTTCCTTTGAAGCCTGATGACAAGAGTTCCTGAGTTTGTCTGCAACTCAGAGGCAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| CDS-3UTR GCA 90 bp | GGCCCAGTAAGTAGGATGGAAACATATACTCCCATTTCCAGAACACAGACACTACTAAGTCTGGATGTATaGCAGGCAAGACCTCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GPVSRMETYTPISRTQTLLSLDV*QARPQS Trigger: ACTCTGAGGTCTTGCCTGGCATACATCCAGACTTAG...TAGTGTCTGTGTTCTGGAAATGGGAGTATATGTTTCCATCCTACTTACTGGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR CAA 72 bp | TTCCCCTCTAACTTCTCTTTTAAAGTTGCCTCTGAGTaGCAGACAAACTCAGGAACTCTTGTCATCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FPSNFSFKVASE*QTNSGTLVIRL Trigger: AAGCCTGATGACAAGAGTTCCTGAGTTTGTCTGCAACTCAGAGGCAACTTTAAAAGAGAAGTTAGAGGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| 3UTR CAA 72 bp | TGCACAAATTGTACTTTGGCATTTAACACATATGCCTaGAGATCTGGGTATGGATGGCATCAACGGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CTNCTLAFNTYA*RSGYGWHQRKE Trigger: TTCTTTCCGTTGATGCCATCCATACCCAGATCTCAAGGCATATGTGTTAAATGCCAAAGTACAATTTGTGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| CDS CCA 90 bp | ACCTCGGGCGGAGGCTGCGCGGCACTGCAGCAGTTGAAGTCCACCTaGGAGCCCCTGGCTGCGTACAGCGTGCCGTTGGGGAGGGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TSGGGCAALQQLKST*EPLAAYSVPLGRVP Trigger: TGGCACCCTCCCCAACGGCACGCTGTACGCAGCCAGGGGCTCCCAGGTGGACTTCAACTGCTGCAGTGCCGCGCAGCCTCCGCCCGAGGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS TCA 90 bp | TCCACCACTCCACCTCGGGCGGAGGCTGCGCGGCACTGCAGCAGTTaGAGTCCACCTGGGAGCCCCTGGCTGCGTACAGCGTGCCGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: STTPPRAEAARHCSS*SPPGSPWLRTACRW Trigger: CCAACGGCACGCTGTACGCAGCCAGGGGCTCCCAGGTGGACTTCAACTGCTGCAGTGCCGCGCAGCCTCCGCCCGAGGTGGAGTGGTGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS GCA 90 bp | GACAGACAAGTTGGCACGGGATGGGTTCAGAAGAAGCTGGAGTCCTaGGGAGCCCTGGCGGGCCAGCAGCGCCCCGAGGCACAGCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: DRQVGTGWVQKKLES*GALAGQQRPEAQQD Trigger: GTCCTGCTGTGCCTCGGGGCGCTGCTGGCCCGCCAGGGCTCCGCAGGACTCCAGCTTCTTCTGAACCCATCCCGTGCCAACTTGTCTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| CDS TCA 90 bp | GCCCCTGGCTGCGTACAGCGTGCCGTTGGGGAGGGTGCCAGTGGCTaGGATGTTAACTTCCACGTAGGCAGGGCCACTGGCCACCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: APGCVQRAVGEGASG*DVNFHVGRATGHPK Trigger: CTTCGGGTGGCCAGTGGCCCTGCCTACGTGGAAGTTAACATCTCAGCCACTGGCACCCTCCCCAACGGCACGCTGTACGCAGCCAGGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS CCA 90 bp | TTGGCCGACAGGTTCTTTCCAAGGAACTCCGGGATGCTGTGGGTCTaGATCCACCACTCCACCTCGGGCGGAGGCTGCGCGGCACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LADRFFPRNSGMLWV*IHHSTSGGGCAALQ Trigger: CTGCAGTGCCGCGCAGCCTCCGCCCGAGGTGGAGTGGTGGATCCAGACCCACAGCATCCCGGAGTTCCTTGGAAAGAACCTGTCGGCCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS CCA 90 bp | TGGCTGCTGGGCTGGATGGCGGGCTGCGTGAGGTTCCTCAGCCACTaGATCCTCGCAGGTGGGTTGGCTCCTGACACTTCGCAGGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: WLLGWMAGCVRFLSH*ILAGGLAPDTSQVR Trigger: TCTCACCTGCGAAGTGTCAGGAGCCAACCCACCTGCGAGGATCCAGTGGCTGAGGAACCTCACGCAGCCCGCCATCCAGCCCAGCAGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CAA 90 bp | GCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCGGAGGGAGGCTGGAATaGAAGGAGACCAGGAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: AVPVLQRPQQSLTQAPQGGGRLE*KETRKA Trigger: CGCCTTCCTGGTCTCCTTCAATTCCAGCCTCCCTCC...GCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCAGCTTTGCCCCACACCGGCTGCTCCTTCTCAGTGCACTTCACACTGCTGGCGGCACTGCAGCAGTaGAAGTCCACCTGGGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TAALPHTGCSFSVHFTLLAALQQ*KSTWEP Trigger: GGGCTCCCAGGTGGACTTCAACTGCTGCAGTGCCGC...CAGCAGTGTGAAGTGCACTGAGAAGGAGCAGCCGGTGTGGGGCAAAGCTGCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS TCA 90 bp | CCCTCCCTTCCACCAGAAAGCCGGGCTGTAATACAGAGTGAGGCCTaGAACAACGGCCAGTCCCAGCAGGAGGAGGCTCACCACAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSLPPESRAVIQSEA*NNGQSQQEEAHHSA Trigger: GGCACTGTGGTGAGCCTCCTCCTGCTGGGACTGGCCGTTGTTTCAGGCCTCACTCTGTATTACAGCCCGGCTTTCTGGTGGAAGGGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS GCA 90 bp | GGCCTGAAACAACGGCCAGTCCCAGCAGGAGGAGGCTCACCACAGTaGCCACGATGCCCCCGATGTTCAGCGGTTCTTTCACACTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: GLKQRPVPAGGGSPQ*PRCPRCSAVLSHST Trigger: GGTTGAGTGTGAAAGAACCGCTGAACATCGGGGGCATCGTGGGCACTGTGGTGAGCCTCCTCCTGCTGGGACTGGCCGTTGTTTCAGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CAA 90 bp | GCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCAGGTCCTGTGAGCAGTaGTGGATGGTGAGAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AVPVLQRPQQSLTQAPQGRSCEQ*WMVREE Trigger: CTCCTCTCTCACCATCCACAACTGCTCACAGGACCT...GCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS TCA 90 bp | CATCCTCTAGAGAGAAACGGGGAGCAGCCGGAGGGAGGCTGGAATTaGAGGAGACCAGGAAGGCGGGCTCAGAGTCATTCCTGTACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HPLERNGEQPEGGWN*RRPGRRAQSHSCTR Trigger: CCTGGTACAGGAATGACTCTGAGCCCGCCTTCCTGGTCTCCTTCAATTCCAGCCTCCCTCCGGCTGCTCCCCGTTTCTCTCTAGAGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS TCA 90 bp | GCCAGTAGACCAGGAGCTCGGTGGTCACCTTTCGCTGTCTCCCGCTaGGCACGTTGGTGGCTGAGCACGTGTAGTTGCCTTGGAGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ASRPGARWSPFAVSR*ARWWLSTCSCLGGF Trigger: AAAACCTCCAAGGCAACTACACGTGCTCAGCCACCAACGTGCTCAGCGGGAGACAGCGAAAGGTGACCACCGAGCTCCTGGTCTACTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS TCA 90 bp | ATGTGCTCCCTCCCTTCCACCAGAAAGCCGGGCTGTAATACAGAGTaGGGCCTGAAACAACGGCCAGTCCCAGCAGGAGGAGGCTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: MCSLPSTRKPGCNTE*GLKQRPVPAGGGSP Trigger: TGGTGAGCCTCCTCCTGCTGGGACTGGCCGTTGTTTCAGGCCTCACTCTGTATTACAGCCCGGCTTTCTGGTGGAAGGGAGGGAGCACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS GCA 90 bp | CAACGGCCAGTCCCAGCAGGAGGAGGCTCACCACAGTGCCCACGATaGCCCCGATGTTCAGCGGTTCTTTCACACTCAACCAGATGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QRPVPAGGGSPQCPR*PRCSAVLSHSTRCL Trigger: CAAACATCTGGTTGAGTGTGAAAGAACCGCTGAACATCGGGGGCATCGTGGGCACTGTGGTGAGCCTCCTCCTGCTGGGACTGGCCGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS TCA 90 bp | CTCGGTGGTCACCTTTCGCTGTCTCCCGCTGAGCACGTTGGTGGCTaGGCACGTGTAGTTGCCTTGGAGGTTTTGGGACATGAGCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGGHLSLSPAEHVGG*ARVVALEVLGHEHQ Trigger: CTGATGCTCATGTCCCAAAACCTCCAAGGCAACTACACGTGCTCAGCCACCAACGTGCTCAGCGGGAGACAGCGAAAGGTGACCACCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CAA 90 bp | AGACCCCAGCAGTCCCTAACACAAGCTCCCCAGGGCAGCACGGTGAGATGGGGGACTCCTCTGTCTCATTaGTCTCCTGTTCCACCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RPQQSLTQAPQGSTVRWGTPLSH*SPVPPL Trigger: AAGAGGTGGAACAGGAGACAAATGAGACAGAGGAGT...CCCCCATCTCACCGTGCTGCCCTGGGGAGCTTGTGTTAGGGACTGCTGGGGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS GCA 90 bp | CAGGGAACCAGTGGGTCTCATTCAGAACCTCCTGGCAGGTGTAGTTaGCGTCATCCTCTAGTCTCAGTGCCTCAATACGCAGGGCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: QGTSGSHSEPPGRCS*RHPLVSVPQYAGHL Trigger: CAGGTGCCCTGCGTATTGAGGCACTGAGACTAGAGGATGACGGCAACTACACCTGCCAGGAGGTTCTGAATGAGACCCACTGGTTCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAGAGATGCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCGGTGAGAGAGGAGCTTaGGCCCTGCTGGGTGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: KKRCCACAAETPAVPNTSGERGA*ALLGDD Trigger: ATCATCACCCAGCAGGGCCAAAGCTCCTCTCTCACC...GCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGCATCTCTTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS GCA 90 bp | CATTTGAACTTCTTGCCCTCCAACAGCTGCGCCGGGCTCAGTGTTTaGAGCTTTGAGTTCCCCATGATCGTTCCTCCAGGTTCCTCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HLNFLPSNSCAGLSV*SFEFPMIVPPGSSV Trigger: GACCGAGGAACCTGGAGGAACGATCATGGGGAACTCAAAGCTGCAAACACTGAGCCCGGCGCAGCTGTTGGAGGGCAAGAAGTTCAAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS CCA 90 bp | GAGAGCTTTACCACACAGCTGGCTCCAGACTCAGGTCCCAGTATGTaGTTCCCAACGCATTTGAACTTCTTGCCCTCCAACAGCTGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: ESFTTQLAPDSGPSM*FPTHLNFLPSNSCA Trigger: GGCGCAGCTGTTGGAGGGCAAGAAGTTCAAATGCGTTGGGAACCACATACTGGGACCTGAGTCTGGAGCCAGCTGTGTGGTAAAGCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS CCA 90 bp | CCACAGCCTCTAAGTCTGGATGTATGCCAGGCAAGACCTCAGAGTTaGGCCGGACAGACAAGTTGGCACGGGATGGGTTCAGAAGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PQPLSLDVCQARPQS*AGQTSWHGMGSEEA Trigger: AGCTTCTTCTGAACCCATCCCGTGCCAACTTGTCTGTCCGGCCCAACTCTGAGGTCTTGCCTGGCATACATCCAGACTTAGAGGCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| CDS-3UTR CAA 90 bp | CCACACCAAATGAAGTCAGTGGGAGATGACAGACGGAAGAAGAGATGCTGTGCCGGAGGGAGGCTGGAATaGAAGGAGACCAGGAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PHQMKSVGDDRRKKRCCAGGRLE*KETRKA Trigger: CGCCTTCCTGGTCTCCTTCAATTCCAGCCTCCCTCC...GGCACAGCATCTCTTCTTCCGTCTGTCATCTCCCACTGACTTCATTTGGTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CAA 90 bp | ACGTTGACCCATCTGCAGTTTTTCTTTGCAGTAGCTGGTAGCCAGTTCTGTGGTGCGGCACTGCAGCAGTaGAAGTCCACCTGGGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TLTHLQFFFAVAGSQFCGAALQQ*KSTWEP Trigger: GGGCTCCCAGGTGGACTTCAACTGCTGCAGTGCCGC...ACCACAGAACTGGCTACCAGCTACTGCAAAGAAAAACTGCAGATGGGTCAACGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAGAGATGCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCAGGTCCTGTGAGCAGTaGTGGATGGTGAGAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KKRCCACAAETPAVPNTSRSCEQ*WMVREE Trigger: CTCCTCTCTCACCATCCACAACTGCTCACAGGACCT...GCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGCATCTCTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CAA 90 bp | AGAAGAGATGCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCTATCAGCGTGAAGCTGTaGGCCGACAGGTTCTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RRDAVPVLQRPQQSLTQAISVKL*ADRFFP Trigger: TGGAAAGAACCTGTCGGCCAACAGCTTCACGCTGAT...AGCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGCATCTCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAGAGATGCTGTGCCTGTGCTGCAGAGACCCCAGCAGTCCCTAACACAAGCGTTGCCTTGGAGGTTTaGGGACATGAGCATCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: KKRCCACAAETPAVPNTSVALEV*GHEHQR Trigger: ACGCTGATGCTCATGTCCCAAAACCTCCAAGGCAAC...GCTTGTGTTAGGGACTGCTGGGGTCTCTGCAGCACAGGCACAGCATCTCTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCAGCTTTGCCCCACACCGGCTGCTCCTTCTCAGTGCACTTCACACTGCTGACTCCTCTGTCTCATTaGTCTCCTGTTCCACCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TAALPHTGCSFSVHFTLLTPLSH*SPVPPL Trigger: AAGAGGTGGAACAGGAGACAAATGAGACAGAGGAGT...CAGCAGTGTGAAGTGCACTGAGAAGGAGCAGCCGGTGTGGGGCAAAGCTGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS TCA 90 bp | CCTGAAACTCCTGGAATCCATTCCCCATGCGGTCTAAGTTCCCGTTaGCCAGAGCAGTCACCCTGTGAATGTGTCCATGCTTGCTTATCC | + |
|
Preference number: 5 (lower is better) Translates to: PETPGIHSPCGLSSR*PEQSPCECVHACLS Trigger: GGATAAGCAAGCATGGACACATTCACAGGGTGACTGCTCTGGTCAACGGGAACTTAGACCGCATGGGGAATGGATTCCAGGAGTTTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS GCA 90 bp | AGTATGTGGTTCCCAACGCATTTGAACTTCTTGCCCTCCAACAGCTaGGCCGGGCTCAGTGTTTGCAGCTTTGAGTTCCCCATGATCGTT | + |
|
Preference number: 5 (lower is better) Translates to: SMWFPTHLNFLPSNS*AGLSVCSFEFPMIV Trigger: AACGATCATGGGGAACTCAAAGCTGCAAACACTGAGCCCGGCGCAGCTGTTGGAGGGCAAGAAGTTCAAATGCGTTGGGAACCACATACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS-3UTR CAA 90 bp | ACGTTGACCCATCTGCAGTTTTTCTTTGCAGTAGCTGGTAGCCAGTTCTGTGGTGTTGCCTTGGAGGTTTaGGGACATGAGCATCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: TLTHLQFFFAVAGSQFCGVALEV*GHEHQR Trigger: ACGCTGATGCTCATGTCCCAAAACCTCCAAGGCAAC...ACCACAGAACTGGCTACCAGCTACTGCAAAGAAAAACTGCAGATGGGTCAACGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| CDS CAA 90 bp | ATCCACCACTCCACCTCGGGCGGAGGCTGCGCGGCACTGCAGCAGTaGAAGTCCACCTGGGAGCCCCTGGCTGCGTACAGCGTGCCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: IHHSTSGGGCAALQQ*KSTWEPLAAYSVPL Trigger: CAACGGCACGCTGTACGCAGCCAGGGGCTCCCAGGTGGACTTCAACTGCTGCAGTGCCGCGCAGCCTCCGCCCGAGGTGGAGTGGTGGAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS GCA 72 bp | TGGGTCTGGATCCACCACTCCACCTCGGGCGGAGGCTaGGCGGCACTGCAGCAGTTGAAGTCCACCTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: WVWIHHSTSGGG*AALQQLKSTWE Trigger: CTCCCAGGTGGACTTCAACTGCTGCAGTGCCGCGCAGCCTCCGCCCGAGGTGGAGTGGTGGATCCAGACCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS CCA 72 bp | GGCTGGATGGCGGGCTGCGTGAGGTTCCTCAGCCACTaGATCCTCGCAGGTGGGTTGGCTCCTGACACTTCG | + |
|
Preference number: 6 (lower is better) Translates to: GWMAGCVRFLSH*ILAGGLAPDTS Trigger: CGAAGTGTCAGGAGCCAACCCACCTGCGAGGATCCAGTGGCTGAGGAACCTCACGCAGCCCGCCATCCAGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS CCA 72 bp | AGGTTCTTTCCAAGGAACTCCGGGATGCTGTGGGTCTaGATCCACCACTCCACCTCGGGCGGAGGCTGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: RFFPRNSGMLWV*IHHSTSGGGCA Trigger: CGCGCAGCCTCCGCCCGAGGTGGAGTGGTGGATCCAGACCCACAGCATCCCGGAGTTCCTTGGAAAGAACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS CCA 72 bp | GCCGACAGGTTCTTTCCAAGGAACTCCGGGATGCTGTaGGTCTGGATCCACCACTCCACCTCGGGCGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ADRFFPRNSGML*VWIHHSTSGGG Trigger: GCCTCCGCCCGAGGTGGAGTGGTGGATCCAGACCCACAGCATCCCGGAGTTCCTTGGAAAGAACCTGTCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS TCA 72 bp | TGCGTACAGCGTGCCGTTGGGGAGGGTGCCAGTGGCTaGGATGTTAACTTCCACGTAGGCAGGGCCACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: CVQRAVGEGASG*DVNFHVGRATG Trigger: GCCAGTGGCCCTGCCTACGTGGAAGTTAACATCTCAGCCACTGGCACCCTCCCCAACGGCACGCTGTACGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS GCA 72 bp | CAACGGCCAGTCCCAGCAGGAGGAGGCTCACCACAGTaGCCACGATGCCCCCGATGTTCAGCGGTTCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: QRPVPAGGGSPQ*PRCPRCSAVLS Trigger: TGAAAGAACCGCTGAACATCGGGGGCATCGTGGGCACTGTGGTGAGCCTCCTCCTGCTGGGACTGGCCGTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS TCA 72 bp | GAGAGAAACGGGGAGCAGCCGGAGGGAGGCTGGAATTaGAGGAGACCAGGAAGGCGGGCTCAGAGTCATTCC | + |
|
Preference number: 6 (lower is better) Translates to: ERNGEQPEGGWN*RRPGRRAQSHS Trigger: GGAATGACTCTGAGCCCGCCTTCCTGGTCTCCTTCAATTCCAGCCTCCCTCCGGCTGCTCCCCGTTTCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS TCA 72 bp | CCAGGAGCTCGGTGGTCACCTTTCGCTGTCTCCCGCTaGGCACGTTGGTGGCTGAGCACGTGTAGTTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PGARWSPFAVSR*ARWWLSTCSCL Trigger: AAGGCAACTACACGTGCTCAGCCACCAACGTGCTCAGCGGGAGACAGCGAAAGGTGACCACCGAGCTCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS GCA 72 bp | GTCCCAGCAGGAGGAGGCTCACCACAGTGCCCACGATaGCCCCGATGTTCAGCGGTTCTTTCACACTCAACC | + |
|
Preference number: 6 (lower is better) Translates to: VPAGGGSPQCPR*PRCSAVLSHST Trigger: GGTTGAGTGTGAAAGAACCGCTGAACATCGGGGGCATCGTGGGCACTGTGGTGAGCCTCCTCCTGCTGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS TCA 72 bp | CCACCAGAAAGCCGGGCTGTAATACAGAGTGAGGCCTaGAACAACGGCCAGTCCCAGCAGGAGGAGGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PPESRAVIQSEA*NNGQSQQEEAH Trigger: GTGAGCCTCCTCCTGCTGGGACTGGCCGTTGTTTCAGGCCTCACTCTGTATTACAGCCCGGCTTTCTGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS CAA 72 bp | GTGAGGTTCCTCAGCCACTGGATCCTCGCAGGTGGGTaGGCTCCTGACACTTCGCAGGTGAGAGTCACGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VRFLSHWILAGG*APDTSQVRVTL Trigger: CAACGTGACTCTCACCTGCGAAGTGTCAGGAGCCAACCCACCTGCGAGGATCCAGTGGCTGAGGAACCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS CAA 90 bp | GCATCCTCTAGAGAGAAACGGGGAGCAGCCGGAGGGAGGCTGGAATaGAAGGAGACCAGGAAGGCGGGCTCAGAGTCATTCCTGTACCAG | + |
|
Preference number: 6 (lower is better) Translates to: ASSREKRGAAGGRLE*KETRKAGSESFLYQ Trigger: CTGGTACAGGAATGACTCTGAGCCCGCCTTCCTGGTCTCCTTCAATTCCAGCCTCCCTCCGGCTGCTCCCCGTTTCTCTCTAGAGGATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS CAA 90 bp | CAGCTGGCTCCAGACTCAGGTCCCAGTATGTGGTTCCCAACGCATTaGAACTTCTTGCCCTCCAACAGCTGCGCCGGGCTCAGTGTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: QLAPDSGPSMWFPTH*NFLPSNSCAGLSVC Trigger: GCAAACACTGAGCCCGGCGCAGCTGTTGGAGGGCAAGAAGTTCAAATGCGTTGGGAACCACATACTGGGACCTGAGTCTGGAGCCAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS TCA 72 bp | CTCCCTTCCACCAGAAAGCCGGGCTGTAATACAGAGTaGGGCCTGAAACAACGGCCAGTCCCAGCAGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LPSTRKPGCNTE*GLKQRPVPAGG Trigger: TCCTCCTGCTGGGACTGGCCGTTGTTTCAGGCCTCACTCTGTATTACAGCCCGGCTTTCTGGTGGAAGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS CAA 72 bp | CCAGACTCAGGTCCCAGTATGTGGTTCCCAACGCATTaGAACTTCTTGCCCTCCAACAGCTGCGCCGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PDSGPSMWFPTH*NFLPSNSCAGL Trigger: GAGCCCGGCGCAGCTGTTGGAGGGCAAGAAGTTCAAATGCGTTGGGAACCACATACTGGGACCTGAGTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS CAA 90 bp | GCCACAGCCTCTAAGTCTGGATGTATGCCAGGCAAGACCTCAGAGTaGGGCCGGACAGACAAGTTGGCACGGGATGGGTTCAGAAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: ATASKSGCMPGKTSE*GRTDKLARDGFRRS Trigger: GCTTCTTCTGAACCCATCCCGTGCCAACTTGTCTGTCCGGCCCAACTCTGAGGTCTTGCCTGGCATACATCCAGACTTAGAGGCTGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| CDS TCA 72 bp | CACCTTTCGCTGTCTCCCGCTGAGCACGTTGGTGGCTaGGCACGTGTAGTTGCCTTGGAGGTTTTGGGACAT | + |
|
Preference number: 6 (lower is better) Translates to: HLSLSPAEHVGG*ARVVALEVLGH Trigger: ATGTCCCAAAACCTCCAAGGCAACTACACGTGCTCAGCCACCAACGTGCTCAGCGGGAGACAGCGAAAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS CAA 72 bp | CGATGTTCAGCGGTTCTTTCACACTCAACCAGATGTTaGTTGCCCTCACCCCCACGAGGTTCTCGGCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RCSAVLSHSTRC*LPSPPRGSRPG Trigger: GCCAGGCCGAGAACCTCGTGGGGGTGAGGGCAACAAACATCTGGTTGAGTGTGAAAGAACCGCTGAACATCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS GCA 72 bp | TTCCCAACGCATTTGAACTTCTTGCCCTCCAACAGCTaGGCCGGGCTCAGTGTTTGCAGCTTTGAGTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: FPTHLNFLPSNS*AGLSVCSFEFP Trigger: GGGGAACTCAAAGCTGCAAACACTGAGCCCGGCGCAGCTGTTGGAGGGCAAGAAGTTCAAATGCGTTGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS CCA 72 bp | CTAAGTCTGGATGTATGCCAGGCAAGACCTCAGAGTTaGGCCGGACAGACAAGTTGGCACGGGATGGGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LSLDVCQARPQS*AGQTSWHGMGS Trigger: TGAACCCATCCCGTGCCAACTTGTCTGTCCGGCCCAACTCTGAGGTCTTGCCTGGCATACATCCAGACTTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| CDS CAA 72 bp | TCTAAGTCTGGATGTATGCCAGGCAAGACCTCAGAGTaGGGCCGGACAGACAAGTTGGCACGGGATGGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SKSGCMPGKTSE*GRTDKLARDGF Trigger: GAACCCATCCCGTGCCAACTTGTCTGTCCGGCCCAACTCTGAGGTCTTGCCTGGCATACATCCAGACTTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111967.8 |
||
| CDS TCA 72 bp | CCTGGAATCCATTCCCCATGCGGTCTAAGTTCCCGTTaGCCAGAGCAGTCACCCTGTGAATGTGTCCATGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGIHSPCGLSSR*PEQSPCECVHA Trigger: AGCATGGACACATTCACAGGGTGACTGCTCTGGTCAACGGGAACTTAGACCGCATGGGGAATGGATTCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS GCA 72 bp | GTTCAGCGGTTCTTTCACACTCAACCAGATGTTTGTTaGCCTCACCCCCACGAGGTTCTCGGCCTGGCAATA | + |
|
Preference number: 6 (lower is better) Translates to: VQRFFHTQPDVC*PHPHEVLGLAI Trigger: TATTGCCAGGCCGAGAACCTCGTGGGGGTGAGGGCAACAAACATCTGGTTGAGTGTGAAAGAACCGCTGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS CCA 72 bp | ACCACACAGCTGGCTCCAGACTCAGGTCCCAGTATGTaGTTCCCAACGCATTTGAACTTCTTGCCCTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: TTQLAPDSGPSM*FPTHLNFLPSN Trigger: GTTGGAGGGCAAGAAGTTCAAATGCGTTGGGAACCACATACTGGGACCTGAGTCTGGAGCCAGCTGTGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS CAA 72 bp | TGTTCAGCGGTTCTTTCACACTCAACCAGATGTTTGTaGCCCTCACCCCCACGAGGTTCTCGGCCTGGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: CSAVLSHSTRCL*PSPPRGSRPGN Trigger: ATTGCCAGGCCGAGAACCTCGTGGGGGTGAGGGCAACAAACATCTGGTTGAGTGTGAAAGAACCGCTGAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||
| CDS CAA 90 bp | TGTGTCCATGCTTGCTTATCCCTTTTGGCAACTCCTCTGTCTCATTaGTCTCCTGTTCCACCTCTTCAGCAACATCTTCCTTCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CVHACLSLLATPLSH*SPVPPLQQHLPSPP Trigger: AGGAGGAGAAGGAAGATGTTGCTGAAGAGGTGGAACAGGAGACAAATGAGACAGAGGAGTTGCCAAAAGGGATAAGCAAGCATGGACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086464.8 ENSMUST00000111967.8 |
||